F349481

General Info

Members Datasets Scaffolds Average Seq Length
236 169 472 309

Family's Representative Sequence

Representative Sequence 3300049591|Ga0501075_0086660|Ga0501075_0086660_598_1611
Length 337
Sequence MPAPTERAAPALAADATPDAWPRVAVMGAGAVGCYFGGMLARAGAPVALIGRPRHVDAIAAAGLAMDSIHFQEHVRTDASVDAAAAQGARVVLFCVKTVHTESAARALAPHLAPDAIIVSLQNGVDNTQRIRAAAGIDALPAVVYVAAEMVAPGTVRHTGRGDLIVGALHPEARADHAVQAVVSLFTRAGVPCIRSNHVEADLWTKLVMNCAYNAISALGGQRYGVVARNPWSREVVRDAIIETVAVAGAAGVQLPADLVETGLRLGETMASALSSTAQDIALGRPTEIDSLNGWVARRGQELGVPTPVNRTLHALVKLLEQRTAPADRDPLVTARS

Samples

Sample ID Description Type Environment
1 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
5 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
6 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
11 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
12 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
13 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
14 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
15 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
18 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
19 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
20 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
21 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
22 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
23 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
24 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
25 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
26 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
27 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
28 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
29 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
30 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
31 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
32 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
33 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
34 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
35 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
36 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
37 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
38 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
39 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
40 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
41 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
42 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
44 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
45 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
46 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
47 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
48 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
49 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
50 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
51 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300027512 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
62 3300030879 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
63 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
64 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
65 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
66 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
67 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
68 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
69 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
70 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
71 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
72 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
73 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
74 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
75 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
76 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
77 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
78 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
79 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
80 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
81 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
82 3300041408 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z062817_5195 Metagenome Rhizosphere
83 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
84 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
85 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
86 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
87 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
88 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
89 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
90 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
91 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
92 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
93 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
94 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
95 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
96 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
97 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
98 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
99 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
100 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
101 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
102 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
103 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
104 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
105 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
106 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
107 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
108 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
109 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
110 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
111 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
112 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
113 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
114 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
115 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
116 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
117 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
118 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
119 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
120 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
121 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
122 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
123 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
124 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
125 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
126 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
127 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
128 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
129 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
130 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
131 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
132 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
133 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
134 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
135 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
136 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
137 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
138 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
139 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
140 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
141 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
142 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
143 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
144 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
145 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
146 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
147 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
148 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
149 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
150 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
151 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
152 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
153 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
154 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
155 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
156 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
157 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
158 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
159 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
160 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
161 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
162 2513237166 Paraburkholderia azotifigens UYPR1.413 Isolate Nodule
163 2562617112 Burkholderia sp. BT03 Isolate Rhizosphere
164 2711768613 Burkholderia sp. BT03 Isolate Rhizosphere
165 2808606384 Burkholderia sp. SJZ089 Isolate Rhizosphere
166 2808606390 Burkholderia sp. SJZ115 Isolate Rhizosphere
167 2808606391 Burkholderia sp. SJZ091 Isolate Rhizosphere
168 2921643360 Paraburkholderia steynii HC1.1ba Isolate Nodule
169 8055301274 Paraburkholderia kirstenboschensis LMG 28727 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 95.76
Metatranscriptomes 0.85
Isolates 3.39

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.32
Nodule 1.27
Rhizoplane 3.81
Rhizosphere 82.2
Stem 0
Stem Tuber 0
Unclassified 7.2

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501075_0086660 3300049591 Bacteria 2373
2 rootH2_10217940 3300003320 Bacteria 2184
3 rootL2_10009158 3300003322 Bacteria 12670
4 JGI25160J50197_1000037 3300003354 Bacteria 162757
5 Ga0055526_1000175 3300003771 Bacteria 56970
6 Ga0065165_1000668 3300005262 Bacteria 49417
7 Ga0070683_100157786 3300005329 Bacteria 2152
8 Ga0070670_100001404 3300005331 Bacteria 19335
9 Ga0070680_100166557 3300005336 Bacteria 1853
10 Ga0070674_100063703 3300005356 Bacteria 2581
11 Ga0070673_100284143 3300005364 Bacteria 1452
12 Ga0070709_10032895 3300005434 Bacteria 3132
13 Ga0070714_100080418 3300005435 Bacteria 2836
14 Ga0070713_100092404 3300005436 Bacteria 2605
15 Ga0070663_100001123 3300005455 Bacteria 14739
16 Ga0070681_10299524 3300005458 Bacteria 1518
17 Ga0070681_10368751 3300005458 Unclassified 1346
18 Ga0070707_100141319 3300005468 Bacteria 2343
19 Ga0070707_100344819 3300005468 Bacteria 1447
20 Ga0070699_100136372 3300005518 Bacteria 2165
21 Ga0070679_100182443 3300005530 Bacteria 2071
22 Ga0070684_100157305 3300005535 Bacteria 2061
23 Ga0070664_100090115 3300005564 Bacteria 2654
24 Ga0070717_10008727 3300006028 Bacteria 7582
25 Ga0070717_10096525 3300006028 Bacteria 2504
26 Ga0075365_10049840 3300006038 Bacteria 2760
27 Ga0075368_10013866 3300006042 Bacteria 2966
28 Ga0075363_100071609 3300006048 Bacteria 1884
29 Ga0075363_100187625 3300006048 Bacteria 1178
30 Ga0070715_10029279 3300006163 Bacteria 2217
31 Ga0075367_10135030 3300006178 Bacteria 1526
32 Ga0075366_10150889 3300006195 Bacteria 1407
33 Ga0097621_100170495 3300006237 Bacteria 1876
34 Ga0075370_10112377 3300006353 Bacteria 1582
35 Ga0075428_100434461 3300006844 Unclassified 1406
36 Ga0075431_100033359 3300006847 Bacteria 5306
37 Ga0075431_100185192 3300006847 Bacteria 2135
38 Ga0075433_10150549 3300006852 Unclassified 2070
39 Ga0075434_100118170 3300006871 Bacteria 2665
40 Ga0075434_100405785 3300006871 Bacteria 1384
41 Ga0075429_100124558 3300006880 Bacteria 2253
42 Ga0075436_100004157 3300006914 Bacteria 9928
43 Ga0075436_100011795 3300006914 Bacteria 5996
44 Ga0075435_100125017 3300007076 Bacteria 2149
45 Ga0075435_100440173 3300007076 Bacteria 1124
46 Ga0099795_10011513 3300007788 Bacteria 2647
47 Ga0105240_10041809 3300009093 Bacteria 5846
48 Ga0111539_10168448 3300009094 Unclassified 2560
49 Ga0111539_10320034 3300009094 Bacteria 1805
50 Ga0105245_10438898 3300009098 Bacteria 1312
51 Ga0114129_10000777 3300009147 Bacteria 40773
52 Ga0114129_10190878 3300009147 Unclassified 2782
53 Ga0114129_10278982 3300009147 Bacteria 2233
54 Ga0114129_10589169 3300009147 Unclassified 1442
55 Ga0105243_10076432 3300009148 Bacteria 2721
56 Ga0105237_10404814 3300009545 Unclassified 1369
57 Ga0105238_10237140 3300009551 Bacteria 1801
58 Ga0105238_10437356 3300009551 Bacteria 1304
59 Ga0099796_10000248 3300010159 Bacteria 8547
60 Ga0163162_10000496 3300013306 Bacteria 36591
61 Ga0163162_10571795 3300013306 Bacteria 1257
62 Ga0228598_1000294 3300024227 Bacteria 9696
63 Ga0209564_1000145 3300025295 Bacteria 175251
64 Ga0209564_1010886 3300025295 Bacteria 4138
65 Ga0207426_1000004 3300025302 Bacteria 1047900
66 Ga0207685_10064151 3300025905 Bacteria 1466
67 Ga0207707_10229355 3300025912 Unclassified 1616
68 Ga0207695_10010215 3300025913 Bacteria 11513
69 Ga0207693_10155047 3300025915 Bacteria 1801
70 Ga0207650_10049738 3300025925 Bacteria 3097
71 Ga0207644_10197098 3300025931 Bacteria 1587
72 Ga0207661_10090969 3300025944 Bacteria 2542
73 Ga0207679_10095427 3300025945 Bacteria 2312
74 Ga0207678_10005728 3300026067 Bacteria 11089
75 Ga0209179_1004973 3300027512 Bacteria 2048
76 Ga0265338_10001292 3300028800 Bacteria 41039
77 Ga0265765_1007733 3300030879 Unclassified 1162
78 Ga0265760_10004880 3300031090 Bacteria 3840
79 Ga0265339_10022552 3300031249 Bacteria 3648
80 Ga0373959_0045519 3300034820 Bacteria 933
81 Ga0373926_0118988 3300035083 Bacteria 995
82 Ga0373934_0092877 3300035086 Bacteria 1217
83 Ga0373923_0015507 3300035111 Bacteria 2878
84 Ga0373936_0032377 3300035113 Bacteria 2068
85 Ga0373945_0003615 3300035116 Bacteria 4871
86 Ga0373954_0000751 3300035118 Bacteria 12539
87 Ga0373954_0007416 3300035118 Bacteria 4800
88 Ga0373954_0044085 3300035118 Bacteria 2081
89 Ga0373954_0160918 3300035118 Bacteria 1098
90 Ga0373957_0001946 3300035120 Bacteria 5751
91 Ga0373946_0001635 3300035171 Bacteria 7815
92 Ga0373955_0002056 3300035172 Bacteria 8665
93 Ga0373955_0138154 3300035172 Unclassified 1427
94 Ga0373955_0377046 3300035172 Unclassified 861
95 Ga0373935_0000086 3300035692 Bacteria 40589
96 Ga0373935_0099948 3300035692 Bacteria 1911
97 Ga0373927_0002359 3300035695 Bacteria 13770
98 Ga0373933_0002881 3300035724 Bacteria 9616
99 Ga0373947_0000096 3300035725 Bacteria 44841
100 Ga0373937_0000198 3300036401 Bacteria 59112
101 Ga0373937_0136892 3300036401 Bacteria 2290
102 Ga0373937_0242178 3300036401 Unclassified 1699
103 Ga0373925_0000071 3300037068 Bacteria 106825
104 Ga0373925_0051706 3300037068 Bacteria 3068
105 Ga0395905_0000020 3300037471 Bacteria 337672
106 Ga0439453_0001293 3300041408 Bacteria 3177
107 Ga0439449_0018173 3300042007 Bacteria 2638
108 Ga0466963_0066610 3300044694 Bacteria 2416
109 Ga0466967_0190646 3300045976 Bacteria 1937
110 Ga0495592_0000117 3300046454 Bacteria 69975
111 Ga0495592_0030853 3300046454 Bacteria 4054
112 Ga0495603_0000363 3300046455 Bacteria 24523
113 Ga0495590_0003293 3300046457 Bacteria 6612
114 Ga0495651_0000370 3300046462 Bacteria 34672
115 Ga0495651_0149626 3300046462 Bacteria 1684
116 Ga0495653_0000047 3300046463 Bacteria 111093
117 Ga0495653_0100329 3300046463 Bacteria 2099
118 Ga0495580_0000009 3300046472 Bacteria 101827
119 Ga0495580_0321862 3300046472 Unclassified 1051
120 Ga0495582_0035212 3300046473 Bacteria 2753
121 Ga0495605_0009013 3300046474 Bacteria 5616
122 Ga0495662_0007960 3300046476 Bacteria 5220
123 Ga0495662_0015987 3300046476 Bacteria 3640
124 Ga0495664_0000024 3300046477 Bacteria 126593
125 Ga0495664_0000765 3300046477 Bacteria 16473
126 Ga0495583_0008613 3300046506 Bacteria 6208
127 Ga0495606_0024361 3300046507 Bacteria 4362
128 Ga0495608_0000004 3300046511 Bacteria 355027
129 Ga0495608_0067667 3300046511 Bacteria 2336
130 Ga0495618_0000036 3300046514 Bacteria 101535
131 Ga0495628_0000006 3300046516 Bacteria 306606
132 Ga0495628_0026481 3300046516 Bacteria 4727
133 Ga0495630_0000647 3300046517 Bacteria 25227
134 Ga0495630_0011116 3300046517 Bacteria 6515
135 Ga0495648_0083236 3300046524 Bacteria 1813
136 Ga0495652_0000038 3300046529 Bacteria 129311
137 Ga0495652_0006207 3300046529 Bacteria 11149
138 Ga0495640_0000001 3300046533 Bacteria 853827
139 Ga0495640_0032550 3300046533 Bacteria 3713
140 Ga0495586_0074428 3300046535 Bacteria 1859
141 Ga0495587_0000004 3300046536 Bacteria 358433
142 Ga0495597_0093268 3300046542 Bacteria 1276
143 Ga0495645_0000001 3300046543 Bacteria 657910
144 Ga0495645_0001247 3300046543 Bacteria 17333
145 Ga0495667_0000093 3300046559 Bacteria 65066
146 Ga0495667_0079728 3300046559 Bacteria 2128
147 Ga0495634_0000133 3300046642 Bacteria 64326
148 Ga0495634_0127828 3300046642 Bacteria 1622
149 Ga0495635_0000003 3300046663 Bacteria 390055
150 Ga0495657_0000143 3300046675 Bacteria 64334
151 Ga0495599_0000012 3300046678 Bacteria 181156
152 Ga0495599_0001366 3300046678 Bacteria 13942
153 Ga0495599_0281763 3300046678 Bacteria 1007
154 Ga0495623_0000015 3300046679 Bacteria 117329
155 Ga0495623_0019825 3300046679 Bacteria 4347
156 Ga0495646_0000005 3300046680 Bacteria 266899
157 Ga0495646_0044182 3300046680 Bacteria 2725
158 Ga0495613_0069757 3300046689 Bacteria 2562
159 Ga0495600_0000051 3300046809 Bacteria 69572
160 Ga0495600_0168664 3300046809 Bacteria 1413
161 Ga0495581_0010700 3300047315 Bacteria 5306
162 Ga0495604_0000002 3300047317 Bacteria 530904
163 Ga0495604_0041089 3300047317 Bacteria 3628
164 Ga0495674_0000004 3300047319 Bacteria 531855
165 Ga0495674_0073323 3300047319 Bacteria 2951
166 Ga0495680_0000142 3300047322 Bacteria 72324
167 Ga0495680_0024759 3300047322 Bacteria 4974
168 Ga0495680_0098120 3300047322 Bacteria 2186
169 Ga0495683_0005454 3300047323 Bacteria 7057
170 Ga0495683_0021775 3300047323 Bacteria 3301
171 Ga0495687_016497 3300047443 Bacteria 3713
172 Ga0495687_099129 3300047443 Bacteria 1097
173 Ga0495675_0000824 3300047444 Bacteria 19028
174 Ga0495675_0096345 3300047444 Bacteria 1855
175 Ga0495673_0029212 3300047469 Bacteria 2604
176 Ga0495684_0000004 3300047471 Bacteria 307093
177 Ga0495684_0136313 3300047471 Bacteria 1842
178 Ga0495593_0001806 3300047673 Bacteria 12722
179 Ga0495602_0000001 3300048088 Bacteria 510904
180 Ga0495602_0138114 3300048088 Bacteria 1933
181 Ga0495602_0250728 3300048088 Bacteria 1319
182 Ga0495626_0031253 3300048091 Bacteria 2564
183 Ga0496100_0000070 3300048903 Bacteria 56600
184 Ga0496100_0330185 3300048903 Bacteria 1148
185 Ga0496101_0000044 3300048904 Bacteria 161295
186 Ga0496102_0000715 3300048905 Bacteria 32824
187 Ga0496103_0000213 3300048906 Bacteria 58012
188 Ga0496104_0177762 3300048907 Bacteria 2038
189 Ga0496105_0115579 3300048908 Bacteria 2213
190 Ga0496105_0133273 3300048908 Bacteria 2047
191 Ga0496112_0013267 3300048915 Bacteria 7607
192 Ga0496117_0000098 3300048920 Bacteria 196331
193 Ga0496118_0000625 3300048921 Bacteria 58119
194 Ga0496119_0024142 3300048922 Bacteria 4286
195 Ga0496119_0055066 3300048922 Bacteria 2418
196 Ga0496121_0000644 3300048924 Bacteria 65162
197 Ga0496121_0011697 3300048924 Bacteria 9689
198 Ga0495682_0019835 3300049460 Bacteria 2525
199 nmdc:mga03683_61654_c1 3300050489 Unclassified 1587
200 nmdc:mga03n38_85265_c1 3300050490 Bacteria 1493
201 nmdc:mga06z11_58055_c1 3300050494 Bacteria 2007
202 nmdc:mga04h51_48288_c1 3300050495 Bacteria 1418
203 nmdc:mga04h51_82643_c1 3300050495 Bacteria 1143
204 nmdc:mga07m45_61169_c1 3300050496 Bacteria 2133
205 nmdc:mga05p37_126677_c1 3300050507 Bacteria 3136
206 nmdc:mga05p37_39426_c1 3300050507 Bacteria 5800
207 nmdc:mga05p37_9358_c1 3300050507 Bacteria 11594
208 nmdc:mga09592_112447_c1 3300050508 Bacteria 2336
209 nmdc:mga06r32_22074_c1 3300050510 Unclassified 3787
210 nmdc:mga06r32_31958_c1 3300050510 Bacteria 4947
211 nmdc:mga06r32_348258_c1 3300050510 Bacteria 1466
212 nmdc:mga0n895_392529_c1 3300050512 Bacteria 1404
213 nmdc:mga0n895_57311_c1 3300050512 Unclassified 3840
214 nmdc:mga0rr50_108525_c1 3300050513 Bacteria 2193
215 nmdc:mga0rr50_305094_c1 3300050513 Bacteria 1332
216 nmdc:mga08x19_1955_c1 3300050514 Bacteria 11416
217 nmdc:mga08x19_275110_c1 3300050514 Bacteria 1166
218 nmdc:mga08x19_9445_c1 3300050514 Bacteria 5840
219 nmdc:mga0sz30_41184_c1 3300050516 Bacteria 1942
220 Ga0495601_0000026 3300053077 Bacteria 126257
221 Ga0495601_0187056 3300053077 Bacteria 1354
222 Ga0495612_0000005 3300053078 Bacteria 286943
223 Ga0495595_0000058 3300053084 Bacteria 57705
224 Ga0495619_0000003 3300053085 Bacteria 515784
225 Ga0500641_0009088 3300053096 Bacteria 3564
226 Ga0500616_0070327 3300053153 Bacteria 1787
227 Ga0501084_0412609 3300054114 Unclassified 1141
228 Ga0501082_0233875 3300060353 Bacteria 1599
229 2514049300 2513237166 Bacteria 10373764
230 2563059780 2562617112 Bacteria 10918404
231 2713480512 2711768613 Bacteria 11048459
232 2808974235 2808606384 Bacteria 8474373
233 2809009021 2808606390 Bacteria 8476311
234 2809016172 2808606391 Bacteria 8308166
235 2921653770 2921643360 Bacteria 11448031
236 8055303241 8055301274 Bacteria 8587385
237 Ga0501075_0086660
238 rootH2_10217940
239 rootL2_10009158
240 JGI25160J50197_1000037
241 Ga0055526_1000175
242 Ga0065165_1000668
243 Ga0070683_100157786
244 Ga0070670_100001404
245 Ga0070680_100166557
246 Ga0070674_100063703
247 Ga0070673_100284143
248 Ga0070709_10032895
249 Ga0070714_100080418
250 Ga0070713_100092404
251 Ga0070663_100001123
252 Ga0070681_10299524
253 Ga0070681_10368751
254 Ga0070707_100141319
255 Ga0070707_100344819
256 Ga0070699_100136372
257 Ga0070679_100182443
258 Ga0070684_100157305
259 Ga0070664_100090115
260 Ga0070717_10008727
261 Ga0070717_10096525
262 Ga0075365_10049840
263 Ga0075368_10013866
264 Ga0075363_100071609
265 Ga0075363_100187625
266 Ga0070715_10029279
267 Ga0075367_10135030
268 Ga0075366_10150889
269 Ga0097621_100170495
270 Ga0075370_10112377
271 Ga0075428_100434461
272 Ga0075431_100033359
273 Ga0075431_100185192
274 Ga0075433_10150549
275 Ga0075434_100118170
276 Ga0075434_100405785
277 Ga0075429_100124558
278 Ga0075436_100004157
279 Ga0075436_100011795
280 Ga0075435_100125017
281 Ga0075435_100440173
282 Ga0099795_10011513
283 Ga0105240_10041809
284 Ga0111539_10168448
285 Ga0111539_10320034
286 Ga0105245_10438898
287 Ga0114129_10000777
288 Ga0114129_10190878
289 Ga0114129_10278982
290 Ga0114129_10589169
291 Ga0105243_10076432
292 Ga0105237_10404814
293 Ga0105238_10237140
294 Ga0105238_10437356
295 Ga0099796_10000248
296 Ga0163162_10000496
297 Ga0163162_10571795
298 Ga0228598_1000294
299 Ga0209564_1000145
300 Ga0209564_1010886
301 Ga0207426_1000004
302 Ga0207685_10064151
303 Ga0207707_10229355
304 Ga0207695_10010215
305 Ga0207693_10155047
306 Ga0207650_10049738
307 Ga0207644_10197098
308 Ga0207661_10090969
309 Ga0207679_10095427
310 Ga0207678_10005728
311 Ga0209179_1004973
312 Ga0265338_10001292
313 Ga0265765_1007733
314 Ga0265760_10004880
315 Ga0265339_10022552
316 Ga0373959_0045519
317 Ga0373926_0118988
318 Ga0373934_0092877
319 Ga0373923_0015507
320 Ga0373936_0032377
321 Ga0373945_0003615
322 Ga0373954_0000751
323 Ga0373954_0007416
324 Ga0373954_0044085
325 Ga0373954_0160918
326 Ga0373957_0001946
327 Ga0373946_0001635
328 Ga0373955_0002056
329 Ga0373955_0138154
330 Ga0373955_0377046
331 Ga0373935_0000086
332 Ga0373935_0099948
333 Ga0373927_0002359
334 Ga0373933_0002881
335 Ga0373947_0000096
336 Ga0373937_0000198
337 Ga0373937_0136892
338 Ga0373937_0242178
339 Ga0373925_0000071
340 Ga0373925_0051706
341 Ga0395905_0000020
342 Ga0439453_0001293
343 Ga0439449_0018173
344 Ga0466963_0066610
345 Ga0466967_0190646
346 Ga0495592_0000117
347 Ga0495592_0030853
348 Ga0495603_0000363
349 Ga0495590_0003293
350 Ga0495651_0000370
351 Ga0495651_0149626
352 Ga0495653_0000047
353 Ga0495653_0100329
354 Ga0495580_0000009
355 Ga0495580_0321862
356 Ga0495582_0035212
357 Ga0495605_0009013
358 Ga0495662_0007960
359 Ga0495662_0015987
360 Ga0495664_0000024
361 Ga0495664_0000765
362 Ga0495583_0008613
363 Ga0495606_0024361
364 Ga0495608_0000004
365 Ga0495608_0067667
366 Ga0495618_0000036
367 Ga0495628_0000006
368 Ga0495628_0026481
369 Ga0495630_0000647
370 Ga0495630_0011116
371 Ga0495648_0083236
372 Ga0495652_0000038
373 Ga0495652_0006207
374 Ga0495640_0000001
375 Ga0495640_0032550
376 Ga0495586_0074428
377 Ga0495587_0000004
378 Ga0495597_0093268
379 Ga0495645_0000001
380 Ga0495645_0001247
381 Ga0495667_0000093
382 Ga0495667_0079728
383 Ga0495634_0000133
384 Ga0495634_0127828
385 Ga0495635_0000003
386 Ga0495657_0000143
387 Ga0495599_0000012
388 Ga0495599_0001366
389 Ga0495599_0281763
390 Ga0495623_0000015
391 Ga0495623_0019825
392 Ga0495646_0000005
393 Ga0495646_0044182
394 Ga0495613_0069757
395 Ga0495600_0000051
396 Ga0495600_0168664
397 Ga0495581_0010700
398 Ga0495604_0000002
399 Ga0495604_0041089
400 Ga0495674_0000004
401 Ga0495674_0073323
402 Ga0495680_0000142
403 Ga0495680_0024759
404 Ga0495680_0098120
405 Ga0495683_0005454
406 Ga0495683_0021775
407 Ga0495687_016497
408 Ga0495687_099129
409 Ga0495675_0000824
410 Ga0495675_0096345
411 Ga0495673_0029212
412 Ga0495684_0000004
413 Ga0495684_0136313
414 Ga0495593_0001806
415 Ga0495602_0000001
416 Ga0495602_0138114
417 Ga0495602_0250728
418 Ga0495626_0031253
419 Ga0496100_0000070
420 Ga0496100_0330185
421 Ga0496101_0000044
422 Ga0496102_0000715
423 Ga0496103_0000213
424 Ga0496104_0177762
425 Ga0496105_0115579
426 Ga0496105_0133273
427 Ga0496112_0013267
428 Ga0496117_0000098
429 Ga0496118_0000625
430 Ga0496119_0024142
431 Ga0496119_0055066
432 Ga0496121_0000644
433 Ga0496121_0011697
434 Ga0495682_0019835
435 nmdc:mga03683_61654_c1
436 nmdc:mga03n38_85265_c1
437 nmdc:mga06z11_58055_c1
438 nmdc:mga04h51_48288_c1
439 nmdc:mga04h51_82643_c1
440 nmdc:mga07m45_61169_c1
441 nmdc:mga05p37_126677_c1
442 nmdc:mga05p37_39426_c1
443 nmdc:mga05p37_9358_c1
444 nmdc:mga09592_112447_c1
445 nmdc:mga06r32_22074_c1
446 nmdc:mga06r32_31958_c1
447 nmdc:mga06r32_348258_c1
448 nmdc:mga0n895_392529_c1
449 nmdc:mga0n895_57311_c1
450 nmdc:mga0rr50_108525_c1
451 nmdc:mga0rr50_305094_c1
452 nmdc:mga08x19_1955_c1
453 nmdc:mga08x19_275110_c1
454 nmdc:mga08x19_9445_c1
455 nmdc:mga0sz30_41184_c1
456 Ga0495601_0000026
457 Ga0495601_0187056
458 Ga0495612_0000005
459 Ga0495595_0000058
460 Ga0495619_0000003
461 Ga0500641_0009088
462 Ga0500616_0070327
463 Ga0501084_0412609
464 Ga0501082_0233875
465 2514049300
466 2563059780
467 2713480512
468 2808974235
469 2809009021
470 2809016172
471 2921653770
472 8055303241

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08546

ApbA_C

Ketopantoate reductase PanE/ApbA C terminal

198

321

0.98

PF02558

ApbA

Ketopantoate reductase PanE/ApbA

24

171

0.97

PF01210

NAD_Gly3P_dh_N

NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus

23

145

0.88

PF03807

F420_oxidored

NADP oxidoreductase coenzyme F420-dependent

23

124

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
3hwr-assembly1.cif.gz_B crystal structure of pane/apba family ketopantoate reductase (yp_299159.1) from ralstonia eutropha jmp134 at 2.15 a resolution 0.9691 1 300
3hwr-assembly1.cif.gz_B crystal structure of pane/apba family ketopantoate reductase (yp_299159.1) from ralstonia eutropha jmp134 at 2.15 a resolution 0.9627 1 300
4j56-assembly2.cif.gz_C structure of plasmodium falciparum thioredoxin reductase-thioredoxin complex 0.9459 2 30
2vvl-assembly1.cif.gz_E the structure of mao-n-d3, a variant of monoamine oxidase from aspergillus niger. 0.9272 2 30
5x20-assembly1.cif.gz_B the ternary structure of d-mandelate dehydrogenase with nadh and anilino(oxo)acetate 0.9271 1 298
ID Description Score Start End Superfamily
3hwrB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9855 2 170 3.40.50.720
3hwrB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9796 2 170 3.40.50.720
af_Q6YUU2_65_406_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9503 2 29 3.50.50.60
1vg9E01 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9343 2 30 3.50.50.60
af_Q54LH3_697_827_1.10.1040.10 Mainly Alpha;Orthogonal Bundle;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.9342 173 297 1.10.1040.10
ID Description Score Start End GO Terms
AF-A0A2N2T6F5-F1-model_v4 Ketopantoate reductase N-terminal domain-containing protein 0.988 1 83
AF-A0A2M7Y092-F1-model_v4 2-dehydropantoate 2-reductase 0.9856 2 111 GO:0005737
GO:0008677
GO:0016020
GO:0050661
AF-A0A0S1Y8E4-F1-model_v4 2-dehydropantoate 2-reductase (EC 1.1.1.169) (Ketopantoate reductase) 0.9765 1 296 GO:0005737
GO:0008677
GO:0015940
GO:0050661
AF-A0A849KMX1-F1-model_v4 2-dehydropantoate 2-reductase (EC 1.1.1.169) (Ketopantoate reductase) 0.974 1 298 GO:0005737
GO:0008677
GO:0015940
AF-A9HCD6-F1-model_v4 2-dehydropantoate 2-reductase (EC 1.1.1.169) (Ketopantoate reductase) 0.9729 2 297 GO:0005737
GO:0008677
GO:0015940
GO:0016020
GO:0050661

Map