F349489

General Info

Members Datasets Scaffolds Average Seq Length
236 162 472 366

Family's Representative Sequence

Representative Sequence 3300049743|Ga0501081_0215287|Ga0501081_0215287_201_1304
Length 360
Sequence MRINGKPHRTIWLAADGWSVEIIDQTRLPHEFAIASLRSMEDAARAILTMQVRGAPLIGVTAAYGLAMALRQDASDEALDAALEHLAAQRPTAINLRWALEEVRSAVRNLPRDGRVAVAYQRAARIAEEDVEACRRIGANGLSLVRDLAAAKPKGERVNILTHCNAGWLACVDWGTATAPIYQAHDAGLPVHVWVDETRPRNQGAALTAYELGAHGVPHTIVVDNAGGHLMQQGEVDVCLVGADRVTANADVANKIGTYLKALAARDNGVPFYVALPYSTIDWKLADGFKIPIEQRSAEEVLAMPGRLADGSVVSVEIAAPGSPAGNPAFDVTPARLVTGLITERGIAPASREGLLGAKS

Samples

Sample ID Description Type Environment
1 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
6 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
7 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
8 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
9 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
10 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
11 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
12 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
13 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
14 3300006194 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 Metagenome Rhizosphere
15 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
16 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
17 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
18 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
19 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
20 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
21 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
22 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
23 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
24 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
25 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
26 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
27 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
28 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
29 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
30 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
31 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
32 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
33 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
34 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
35 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
36 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
37 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
55 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
56 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
57 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
58 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
59 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
60 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
61 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
62 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
63 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
64 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
65 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
66 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
67 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
68 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
69 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
70 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
71 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
72 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
73 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
74 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
75 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
76 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
77 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
78 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
79 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
80 3300038727 Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 Metagenome Unclassified
81 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
82 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
83 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
84 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
85 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
86 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
87 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
88 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
89 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
90 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
91 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
92 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
93 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
94 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
95 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
96 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
97 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
98 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
99 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
100 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
101 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
102 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
103 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
104 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
105 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
106 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
107 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
108 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
109 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
110 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
111 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
112 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
113 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
114 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
115 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
116 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
117 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
118 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
119 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
120 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
122 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
123 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
124 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
125 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
126 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
127 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
128 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
129 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
130 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
131 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
132 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
133 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
134 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
135 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
136 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
139 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
140 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
141 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
142 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
143 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
144 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
145 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
146 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
147 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
148 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
149 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
150 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
151 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
152 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
153 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
154 2513237095 Bradyrhizobium diazoefficiens USDA 122 Isolate Nodule
155 2513237098 Bradyrhizobium elkanii WSM2783 Isolate Nodule
156 2513237139 Bradyrhizobium ottawaense USDA 4 Isolate Nodule
157 2802429603 Bradyrhizobium ottawaense L2 Isolate Nodule
158 2824696289 Bradyrhizobium sp. HAMBI 2127 Isolate Unclassified
159 2824773399 Bradyrhizobium sp. HAMBI 2130 Isolate Unclassified
160 2847939898 Bradyrhizobium ottawaense OO99 Isolate Unclassified
161 2903768456 Bradyrhizobium sp. Leo121 Isolate Unclassified
162 8054563764 Acuticoccus kalidii M5D2P5 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 96.19
Metatranscriptomes 0
Isolates 3.81

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.54
Nodule 1.69
Rhizoplane 3.81
Rhizosphere 86.02
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501081_0215287 3300049743 Bacteria 1396
2 SwRhRL2b_contig_1014514 2162886007 Bacteria 1518
3 Ga0065165_1008761 3300005262 Bacteria 4664
4 Ga0070683_100030810 3300005329 Bacteria 4874
5 Ga0070669_100186972 3300005353 Bacteria 1623
6 Ga0070681_10021130 3300005458 Bacteria 6522
7 Ga0070679_100021644 3300005530 Bacteria 6278
8 Ga0070679_100093011 3300005530 Bacteria 3003
9 Ga0070679_100107946 3300005530 Bacteria 2769
10 Ga0068857_100068514 3300005577 Bacteria 3158
11 Ga0068859_100205768 3300005617 Bacteria 2053
12 Ga0068863_100152868 3300005841 Bacteria 2209
13 Ga0068858_100019008 3300005842 Bacteria 6429
14 Ga0068862_100070870 3300005844 Bacteria 3010
15 Ga0081455_10002251 3300005937 Bacteria 22976
16 Ga0075427_10000470 3300006194 Bacteria 4597
17 Ga0097621_100020343 3300006237 Bacteria 5113
18 Ga0075430_100000125 3300006846 Bacteria 48131
19 Ga0075431_100012014 3300006847 Bacteria 8737
20 Ga0075433_10000008 3300006852 Bacteria 75573
21 Ga0075434_100056350 3300006871 Bacteria 3906
22 Ga0075429_100000083 3300006880 Bacteria 49131
23 Ga0075429_100227220 3300006880 Bacteria 1635
24 Ga0068865_100243156 3300006881 Bacteria 1417
25 Ga0097620_100205773 3300006931 Bacteria 2053
26 Ga0075435_100005106 3300007076 Bacteria 9121
27 Ga0111539_10178306 3300009094 Bacteria 2482
28 Ga0114129_10000533 3300009147 Bacteria 46605
29 Ga0114129_10010322 3300009147 Bacteria 13325
30 Ga0105243_10122559 3300009148 Bacteria 2194
31 Ga0105248_10018519 3300009177 Bacteria 7697
32 Ga0105237_10001425 3300009545 Bacteria 31588
33 Ga0105238_10007639 3300009551 Bacteria 10826
34 Ga0105246_10175038 3300011119 Bacteria 1647
35 Ga0157375_10178779 3300013308 Bacteria 2273
36 Ga0157379_10079323 3300014968 Bacteria 2940
37 Ga0157376_10073217 3300014969 Bacteria 2917
38 Ga0157376_10287835 3300014969 Bacteria 1550
39 Ga0213875_10016188 3300021388 Bacteria 3617
40 Ga0209233_1024340 3300025261 Bacteria 1516
41 Ga0209758_1057691 3300025297 Bacteria 1303
42 Ga0207688_10109264 3300025901 Bacteria 1604
43 Ga0207699_10036317 3300025906 Bacteria 2808
44 Ga0207707_10001007 3300025912 Bacteria 27013
45 Ga0207671_10006674 3300025914 Bacteria 10225
46 Ga0207693_10052494 3300025915 Bacteria 3198
47 Ga0207660_10040391 3300025917 Bacteria 3266
48 Ga0207660_10050622 3300025917 Bacteria 2950
49 Ga0207652_10010012 3300025921 Bacteria 7636
50 Ga0207652_10023463 3300025921 Bacteria 5112
51 Ga0207652_10054372 3300025921 Bacteria 3442
52 Ga0207664_10323242 3300025929 Bacteria 1361
53 Ga0207709_10143890 3300025935 Bacteria 1642
54 Ga0207704_10221386 3300025938 Bacteria 1401
55 Ga0207691_10057845 3300025940 Bacteria 3527
56 Ga0207691_10162228 3300025940 Bacteria 1960
57 Ga0207711_10113827 3300025941 Bacteria 2409
58 Ga0207703_10044527 3300026035 Bacteria 3567
59 Ga0207678_10000647 3300026067 Bacteria 32061
60 Ga0207678_10332807 3300026067 Bacteria 1308
61 Ga0207702_10148188 3300026078 Bacteria 2132
62 Ga0207641_10103755 3300026088 Bacteria 2509
63 Ga0207674_10079747 3300026116 Bacteria 3277
64 Ga0207428_10000233 3300027907 Bacteria 76679
65 Ga0307517_10000154 3300028786 Bacteria 109811
66 Ga0307515_10165268 3300028794 Bacteria 2234
67 Ga0265330_10057409 3300031235 Bacteria 1698
68 Ga0265325_10001177 3300031241 Bacteria 18664
69 Ga0265340_10016891 3300031247 Bacteria 3776
70 Ga0265339_10014178 3300031249 Bacteria 4809
71 Ga0316575_10001306 3300031665 Bacteria 7957
72 Ga0316575_10002671 3300031665 Bacteria 6010
73 Ga0316575_10011045 3300031665 Bacteria 3332
74 Ga0265314_10001508 3300031711 Bacteria 25779
75 Ga0265342_10008225 3300031712 Bacteria 7512
76 Ga0316576_10245528 3300031727 Bacteria 1344
77 Ga0316578_10010186 3300031728 Bacteria 4868
78 Ga0316583_10001326 3300032133 Bacteria 8184
79 Ga0316583_10043362 3300032133 Bacteria 1589
80 Ga0316580_10027961 3300032139 Bacteria 1742
81 Ga0373939_0011028 3300035114 Bacteria 2272
82 Ga0373962_0023109 3300035242 Bacteria 1654
83 Ga0316574_0004565 3300035398 Bacteria 7270
84 Ga0316574_0006462 3300035398 Bacteria 6342
85 Ga0316574_0012041 3300035398 Bacteria 4936
86 Ga0316574_0214587 3300035398 Bacteria 1234
87 Ga0373931_0046988 3300035691 Bacteria 2284
88 Ga0373931_0170109 3300035691 Bacteria 1283
89 Ga0373937_0025639 3300036401 Bacteria 5324
90 Ga0373937_0172502 3300036401 Bacteria 2029
91 Ga0316582_0020765 3300036647 Bacteria 3868
92 Ga0316582_0083634 3300036647 Bacteria 2088
93 Ga0316584_0041503 3300036712 Bacteria 3429
94 Ga0316584_0139630 3300036712 Bacteria 1808
95 Ga0373925_0084008 3300037068 Bacteria 2426
96 Ga0316581_0015572 3300037588 Bacteria 2174
97 Ga0436364_1534409 3300037853 Bacteria 67186
98 Ga0400484_30626 3300038725 Bacteria 16473
99 Ga0400490_01349 3300038726 Bacteria 82659
100 Ga0400491_27964 3300038727 Bacteria 1674
101 Ga0400488_41948 3300038741 Bacteria 1861
102 Ga0400489_78987 3300039093 Bacteria 3392
103 Ga0436360_0278610 3300039438 Bacteria 2033
104 Ga0436360_0350977 3300039438 Bacteria 1488
105 Ga0436360_0381384 3300039438 Bacteria 1497
106 Ga0436360_1035526 3300039438 Bacteria 4008
107 Ga0436360_1348339 3300039438 Bacteria 5117
108 Ga0436361_0522214 3300039447 Bacteria 2251
109 Ga0451577_0029421 3300042876 Bacteria 4965
110 Ga0466972_0000103 3300044658 Bacteria 75095
111 Ga0466965_0066434 3300044683 Bacteria 1808
112 Ga0466964_0016468 3300044706 Bacteria 2824
113 Ga0453684_0000007 3300044712 Bacteria 1301482
114 Ga0466967_0076726 3300045976 Bacteria 3006
115 Ga0495582_0118109 3300046473 Bacteria 1493
116 Ga0495639_0016872 3300046475 Bacteria 3172
117 Ga0495664_0072450 3300046477 Bacteria 2058
118 Ga0495584_0066839 3300046491 Bacteria 1808
119 Ga0495618_0065324 3300046514 Bacteria 2312
120 Ga0495652_0037162 3300046529 Bacteria 4227
121 Ga0495645_0145706 3300046543 Bacteria 1649
122 Ga0495588_0165609 3300046674 Bacteria 1169
123 Ga0495599_0031747 3300046678 Bacteria 3315
124 Ga0495674_0067125 3300047319 Bacteria 3108
125 Ga0495672_0076917 3300047320 Bacteria 1872
126 Ga0495684_0126196 3300047471 Bacteria 1925
127 Ga0496100_0160079 3300048903 Bacteria 1613
128 Ga0496101_0027264 3300048904 Bacteria 3978
129 Ga0496101_0129697 3300048904 Bacteria 1914
130 Ga0496103_0024241 3300048906 Bacteria 3660
131 Ga0496104_0047463 3300048907 Bacteria 4047
132 Ga0496105_0348331 3300048908 Bacteria 1183
133 Ga0496106_0028696 3300048909 Bacteria 4145
134 Ga0496106_0109644 3300048909 Bacteria 2148
135 Ga0496114_0205393 3300048917 Bacteria 1727
136 Ga0501031_0112392 3300049568 Bacteria 1779
137 Ga0501032_0048560 3300049569 Bacteria 2865
138 Ga0501032_0113104 3300049569 Bacteria 1796
139 Ga0501034_0000031 3300049571 Bacteria 244022
140 Ga0501034_0020664 3300049571 Bacteria 6725
141 Ga0501034_0022941 3300049571 Bacteria 6359
142 Ga0501036_0019301 3300049572 Bacteria 5722
143 Ga0501036_0069494 3300049572 Bacteria 2979
144 Ga0501037_0031595 3300049573 Bacteria 3910
145 Ga0501037_0112484 3300049573 Bacteria 1961
146 Ga0501038_0027686 3300049574 Bacteria 5041
147 Ga0501038_0033998 3300049574 Bacteria 4485
148 Ga0501038_0096653 3300049574 Bacteria 2465
149 Ga0501039_0052758 3300049575 Bacteria 3145
150 Ga0501039_0141572 3300049575 Bacteria 1889
151 Ga0501039_0165827 3300049575 Bacteria 1737
152 Ga0501040_0071640 3300049576 Bacteria 2393
153 Ga0501040_0115851 3300049576 Bacteria 1876
154 Ga0501041_0052321 3300049577 Bacteria 2489
155 Ga0501042_0019667 3300049578 Bacteria 4693
156 Ga0501042_0023774 3300049578 Bacteria 4292
157 Ga0501042_0041802 3300049578 Bacteria 3261
158 Ga0501043_0047838 3300049579 Bacteria 3363
159 Ga0501043_0080181 3300049579 Bacteria 2564
160 Ga0501043_0131324 3300049579 Bacteria 1963
161 Ga0501046_0002427 3300049580 Bacteria 17479
162 Ga0501046_0037796 3300049580 Bacteria 3878
163 Ga0501046_0039582 3300049580 Bacteria 3774
164 Ga0501046_0043119 3300049580 Bacteria 3593
165 Ga0501047_0001332 3300049581 Bacteria 24241
166 Ga0501047_0022040 3300049581 Bacteria 6119
167 Ga0501047_0064795 3300049581 Bacteria 3524
168 Ga0501047_0087319 3300049581 Bacteria 2996
169 Ga0501047_0107100 3300049581 Bacteria 2677
170 Ga0501047_0198861 3300049581 Bacteria 1865
171 Ga0501048_0150775 3300049582 Bacteria 1644
172 Ga0501067_0002350 3300049583 Bacteria 10466
173 Ga0501067_0002583 3300049583 Bacteria 10003
174 Ga0501067_0038467 3300049583 Bacteria 2656
175 Ga0501069_0009538 3300049585 Bacteria 5124
176 Ga0501070_0003517 3300049586 Bacteria 13551
177 Ga0501070_0003878 3300049586 Bacteria 12900
178 Ga0501070_0027570 3300049586 Bacteria 4764
179 Ga0501070_0335086 3300049586 Bacteria 1229
180 Ga0501071_0051979 3300049587 Bacteria 2954
181 Ga0501071_0099446 3300049587 Bacteria 2143
182 Ga0501072_0046316 3300049588 Bacteria 3422
183 Ga0501072_0092615 3300049588 Bacteria 2400
184 Ga0501073_0045826 3300049589 Bacteria 3079
185 Ga0501074_0068521 3300049590 Bacteria 2550
186 Ga0501074_0194814 3300049590 Bacteria 1444
187 Ga0501075_0023114 3300049591 Bacteria 4550
188 Ga0501077_0004096 3300049593 Bacteria 8798
189 Ga0501077_0007880 3300049593 Bacteria 6578
190 Ga0501077_0044996 3300049593 Bacteria 2804
191 Ga0501079_0013098 3300049741 Bacteria 6324
192 Ga0501079_0101742 3300049741 Bacteria 2228
193 Ga0501079_0298405 3300049741 Bacteria 1260
194 Ga0501080_0000483 3300049742 Bacteria 30977
195 Ga0501080_0016647 3300049742 Bacteria 6790
196 Ga0501080_0226469 3300049742 Bacteria 1710
197 Ga0501081_0020090 3300049743 Bacteria 4452
198 Ga0501081_0023868 3300049743 Bacteria 4102
199 Ga0501081_0103005 3300049743 Bacteria 2019
200 Ga0501083_0074151 3300049744 Bacteria 2261
201 Ga0501035_0001140 3300049822 Bacteria 27786
202 Ga0501035_0015884 3300049822 Bacteria 6947
203 Ga0501035_0214932 3300049822 Bacteria 1644
204 Ga0501044_0000013 3300049823 Bacteria 248795
205 Ga0501044_0006771 3300049823 Bacteria 12632
206 Ga0501044_0038173 3300049823 Bacteria 5017
207 Ga0501045_0018006 3300049824 Bacteria 5016
208 Ga0501045_0029983 3300049824 Bacteria 3935
209 nmdc:mga0yw44_111963_c1 3300050492 Bacteria 1750
210 nmdc:mga0yw44_23667_c1 3300050492 Bacteria 3464
211 nmdc:mga05p37_58_c1 3300050507 Bacteria 95765
212 nmdc:mga09592_246_c1 3300050508 Bacteria 39321
213 nmdc:mga0qj67_348669_c1 3300050509 Bacteria 1197
214 nmdc:mga0qj67_420_c1 3300050509 Bacteria 29051
215 nmdc:mga06r32_1189_c1 3300050510 Bacteria 23415
216 nmdc:mga08y16_408_c1 3300050511 Bacteria 29565
217 nmdc:mga0n895_10116_c1 3300050512 Bacteria 8303
218 nmdc:mga0n895_1786_c1 3300050512 Bacteria 16331
219 nmdc:mga0rr50_35137_c1 3300050513 Bacteria 3597
220 nmdc:mga0a205_43653_c1 3300050515 Bacteria 4322
221 Ga0495601_0015234 3300053077 Bacteria 4644
222 Ga0495612_0022644 3300053078 Bacteria 2517
223 Ga0495619_0032312 3300053085 Bacteria 3395
224 Ga0500559_0062662 3300053136 Bacteria 1661
225 Ga0501084_0012474 3300054114 Bacteria 7042
226 Ga0501084_0287082 3300054114 Bacteria 1389
227 Ga0530510_0010343 3300061734 Bacteria 6539
228 2513647911 2513237095 Bacteria 8976980
229 2513674759 2513237098 Bacteria 9902361
230 2513873858 2513237139 Bacteria 8737671
231 2805915941 2802429603 Bacteria 8777136
232 2824697596 2824696289 Bacteria 8335049
233 2824774886 2824773399 Bacteria 8360218
234 2847941809 2847939898 Bacteria 8606328
235 2903769260 2903768456 Bacteria 9749579
236 8054566717 8054563764 Bacteria 5592885
237 Ga0501081_0215287
238 SwRhRL2b_contig_1014514
239 Ga0065165_1008761
240 Ga0070683_100030810
241 Ga0070669_100186972
242 Ga0070681_10021130
243 Ga0070679_100021644
244 Ga0070679_100093011
245 Ga0070679_100107946
246 Ga0068857_100068514
247 Ga0068859_100205768
248 Ga0068863_100152868
249 Ga0068858_100019008
250 Ga0068862_100070870
251 Ga0081455_10002251
252 Ga0075427_10000470
253 Ga0097621_100020343
254 Ga0075430_100000125
255 Ga0075431_100012014
256 Ga0075433_10000008
257 Ga0075434_100056350
258 Ga0075429_100000083
259 Ga0075429_100227220
260 Ga0068865_100243156
261 Ga0097620_100205773
262 Ga0075435_100005106
263 Ga0111539_10178306
264 Ga0114129_10000533
265 Ga0114129_10010322
266 Ga0105243_10122559
267 Ga0105248_10018519
268 Ga0105237_10001425
269 Ga0105238_10007639
270 Ga0105246_10175038
271 Ga0157375_10178779
272 Ga0157379_10079323
273 Ga0157376_10073217
274 Ga0157376_10287835
275 Ga0213875_10016188
276 Ga0209233_1024340
277 Ga0209758_1057691
278 Ga0207688_10109264
279 Ga0207699_10036317
280 Ga0207707_10001007
281 Ga0207671_10006674
282 Ga0207693_10052494
283 Ga0207660_10040391
284 Ga0207660_10050622
285 Ga0207652_10010012
286 Ga0207652_10023463
287 Ga0207652_10054372
288 Ga0207664_10323242
289 Ga0207709_10143890
290 Ga0207704_10221386
291 Ga0207691_10057845
292 Ga0207691_10162228
293 Ga0207711_10113827
294 Ga0207703_10044527
295 Ga0207678_10000647
296 Ga0207678_10332807
297 Ga0207702_10148188
298 Ga0207641_10103755
299 Ga0207674_10079747
300 Ga0207428_10000233
301 Ga0307517_10000154
302 Ga0307515_10165268
303 Ga0265330_10057409
304 Ga0265325_10001177
305 Ga0265340_10016891
306 Ga0265339_10014178
307 Ga0316575_10001306
308 Ga0316575_10002671
309 Ga0316575_10011045
310 Ga0265314_10001508
311 Ga0265342_10008225
312 Ga0316576_10245528
313 Ga0316578_10010186
314 Ga0316583_10001326
315 Ga0316583_10043362
316 Ga0316580_10027961
317 Ga0373939_0011028
318 Ga0373962_0023109
319 Ga0316574_0004565
320 Ga0316574_0006462
321 Ga0316574_0012041
322 Ga0316574_0214587
323 Ga0373931_0046988
324 Ga0373931_0170109
325 Ga0373937_0025639
326 Ga0373937_0172502
327 Ga0316582_0020765
328 Ga0316582_0083634
329 Ga0316584_0041503
330 Ga0316584_0139630
331 Ga0373925_0084008
332 Ga0316581_0015572
333 Ga0436364_1534409
334 Ga0400484_30626
335 Ga0400490_01349
336 Ga0400491_27964
337 Ga0400488_41948
338 Ga0400489_78987
339 Ga0436360_0278610
340 Ga0436360_0350977
341 Ga0436360_0381384
342 Ga0436360_1035526
343 Ga0436360_1348339
344 Ga0436361_0522214
345 Ga0451577_0029421
346 Ga0466972_0000103
347 Ga0466965_0066434
348 Ga0466964_0016468
349 Ga0453684_0000007
350 Ga0466967_0076726
351 Ga0495582_0118109
352 Ga0495639_0016872
353 Ga0495664_0072450
354 Ga0495584_0066839
355 Ga0495618_0065324
356 Ga0495652_0037162
357 Ga0495645_0145706
358 Ga0495588_0165609
359 Ga0495599_0031747
360 Ga0495674_0067125
361 Ga0495672_0076917
362 Ga0495684_0126196
363 Ga0496100_0160079
364 Ga0496101_0027264
365 Ga0496101_0129697
366 Ga0496103_0024241
367 Ga0496104_0047463
368 Ga0496105_0348331
369 Ga0496106_0028696
370 Ga0496106_0109644
371 Ga0496114_0205393
372 Ga0501031_0112392
373 Ga0501032_0048560
374 Ga0501032_0113104
375 Ga0501034_0000031
376 Ga0501034_0020664
377 Ga0501034_0022941
378 Ga0501036_0019301
379 Ga0501036_0069494
380 Ga0501037_0031595
381 Ga0501037_0112484
382 Ga0501038_0027686
383 Ga0501038_0033998
384 Ga0501038_0096653
385 Ga0501039_0052758
386 Ga0501039_0141572
387 Ga0501039_0165827
388 Ga0501040_0071640
389 Ga0501040_0115851
390 Ga0501041_0052321
391 Ga0501042_0019667
392 Ga0501042_0023774
393 Ga0501042_0041802
394 Ga0501043_0047838
395 Ga0501043_0080181
396 Ga0501043_0131324
397 Ga0501046_0002427
398 Ga0501046_0037796
399 Ga0501046_0039582
400 Ga0501046_0043119
401 Ga0501047_0001332
402 Ga0501047_0022040
403 Ga0501047_0064795
404 Ga0501047_0087319
405 Ga0501047_0107100
406 Ga0501047_0198861
407 Ga0501048_0150775
408 Ga0501067_0002350
409 Ga0501067_0002583
410 Ga0501067_0038467
411 Ga0501069_0009538
412 Ga0501070_0003517
413 Ga0501070_0003878
414 Ga0501070_0027570
415 Ga0501070_0335086
416 Ga0501071_0051979
417 Ga0501071_0099446
418 Ga0501072_0046316
419 Ga0501072_0092615
420 Ga0501073_0045826
421 Ga0501074_0068521
422 Ga0501074_0194814
423 Ga0501075_0023114
424 Ga0501077_0004096
425 Ga0501077_0007880
426 Ga0501077_0044996
427 Ga0501079_0013098
428 Ga0501079_0101742
429 Ga0501079_0298405
430 Ga0501080_0000483
431 Ga0501080_0016647
432 Ga0501080_0226469
433 Ga0501081_0020090
434 Ga0501081_0023868
435 Ga0501081_0103005
436 Ga0501083_0074151
437 Ga0501035_0001140
438 Ga0501035_0015884
439 Ga0501035_0214932
440 Ga0501044_0000013
441 Ga0501044_0006771
442 Ga0501044_0038173
443 Ga0501045_0018006
444 Ga0501045_0029983
445 nmdc:mga0yw44_111963_c1
446 nmdc:mga0yw44_23667_c1
447 nmdc:mga05p37_58_c1
448 nmdc:mga09592_246_c1
449 nmdc:mga0qj67_348669_c1
450 nmdc:mga0qj67_420_c1
451 nmdc:mga06r32_1189_c1
452 nmdc:mga08y16_408_c1
453 nmdc:mga0n895_10116_c1
454 nmdc:mga0n895_1786_c1
455 nmdc:mga0rr50_35137_c1
456 nmdc:mga0a205_43653_c1
457 Ga0495601_0015234
458 Ga0495612_0022644
459 Ga0495619_0032312
460 Ga0500559_0062662
461 Ga0501084_0012474
462 Ga0501084_0287082
463 Ga0530510_0010343
464 2513647911
465 2513674759
466 2513873858
467 2805915941
468 2824697596
469 2824774886
470 2847941809
471 2903769260
472 8054566717

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01008

IF-2B

Initiation factor 2 subunit family

51

350

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
1t9k-assembly1.cif.gz_A x-ray crystal structure of aif-2b alpha subunit-related translation initiation factor [thermotoga maritima] 0.9242 6 364
1t9k-assembly1.cif.gz_A x-ray crystal structure of aif-2b alpha subunit-related translation initiation factor [thermotoga maritima] 0.9136 6 364
2yrf-assembly1.cif.gz_A crystal structure of 5-methylthioribose 1-phosphate isomerase from bacillus subtilis complexed with sulfate ion 0.9065 12 359
1vb5-assembly1.cif.gz_B crystal structure analysis of the pyrococcus horikoshii ot3 translation initiation factor eif-2b 0.9028 40 354
2yrf-assembly1.cif.gz_A crystal structure of 5-methylthioribose 1-phosphate isomerase from bacillus subtilis complexed with sulfate ion 0.8961 12 359
ID Description Score Start End Superfamily
2yvkB02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Translation initiation factor eif-2b; domain 2 0.9518 155 359 3.40.50.10470
4ldrA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Translation initiation factor eif-2b; domain 2 0.943 155 358 3.40.50.10470
af_Q9ZUG4_200_365_3.40.50.10470 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Translation initiation factor eif-2b; domain 2 0.9398 191 349 3.40.50.10470
4ldrA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Translation initiation factor eif-2b; domain 2 0.9338 155 358 3.40.50.10470
1t5oD02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Translation initiation factor eif-2b; domain 2 0.9334 157 360 3.40.50.10470
ID Description Score Start End GO Terms
AF-A0A504CGS1-F1-model_v4 Methylthioribose-1-phosphate isomerase (M1Pi) (MTR-1-P isomerase) (EC 5.3.1.23) (S-methyl-5-thioribose-1-phosphate isomerase) 0.9918 1 362 GO:0019509
GO:0046523
AF-Q2VZP8-F1-model_v4 Methylthioribose-1-phosphate isomerase (M1Pi) (MTR-1-P isomerase) (EC 5.3.1.23) (S-methyl-5-thioribose-1-phosphate isomerase) 0.9917 1 362 GO:0019509
GO:0046523
AF-A0A357CK64-F1-model_v4 S-methyl-5-thioribose-1-phosphate isomerase 0.9896 1 256 GO:0019509
GO:0046523
AF-A0A351SED5-F1-model_v4 S-methyl-5-thioribose-1-phosphate isomerase 0.9879 1 300 GO:0019509
GO:0046523
AF-A0A435UVH1-F1-model_v4 deleted 0.9872 144 362

Map