F350084

General Info

Members Datasets Scaffolds Average Seq Length
237 143 236 378

Family's Representative Sequence

Representative Sequence 3300025944|Ga0207661_10024838|Ga0207661_100248383
Length 435
Sequence MIQIVRTNRHGESSDRRRHSPVIAPTVWEVAKRSREVACSTKLLIRRTDDNVVAIMRKIFYVGALLLLLFEVANVYFIMPMPGSQRMRSIDVAYFLYRWRWEFRVVFGALIVAGLWSAWNAPGRRKWIAPASLVVVASVAYATNFVMAADRMFLPPTVLTMEPAADNKVEEARLVVGVELNGEARAYPVQYIGYHHQVRDTVGGSPVLVSYCTVCRTGRVFVPTVNGRAETFRLVGMDHFNAMFEDATTGSWWRQANGEAIVGPKTGTFLREIPSLQVTLKEWLTLHPASLIMQPDSTFKDEYAKDYAFENGTSRKKLTGTDTISWRDKAWVVGVTLNRASRAFDWNRLRREKVVNDEVGGQPIVLVLARDSTSFFAFERPDSSTRFALRGDSLLGGGHAYALTGRGKGDALKPVFASQEFWHSWREFHPGTTTY

Samples

Sample ID Description Type Environment
1 2522125168 Dyadobacter beijingensis DSM 21582 Isolate Rhizosphere
2 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
9 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
10 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
11 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
12 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
13 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
14 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
15 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
16 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
17 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
18 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
19 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
20 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
21 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
22 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
23 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
24 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
25 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
26 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
27 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
28 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
29 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
30 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
31 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
32 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
33 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
34 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
35 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
36 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
37 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
38 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
39 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
40 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
41 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
42 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
43 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
44 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
45 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
46 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
47 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
48 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
49 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
50 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
51 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
52 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
55 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
56 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
57 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
58 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
59 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
60 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
61 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
62 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
63 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
64 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
65 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
66 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
67 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
68 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
69 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
70 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
71 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
72 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
73 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
75 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
112 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
113 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
114 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
115 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
116 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
117 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
118 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
119 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
120 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
121 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
122 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
123 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
124 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
125 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
126 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
127 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
128 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
129 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
130 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
131 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
132 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
133 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
134 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
135 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
136 3300049850 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J4_A_0_control Metagenome Rhizosphere
137 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
138 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
139 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
140 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
141 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
142 3300053147 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 endosphere Metagenome Endosphere
143 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.58
Metatranscriptomes 0
Isolates 0.42

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.38
Nodule 0
Rhizoplane 0.42
Rhizosphere 95.36
Stem 0
Stem Tuber 0
Unclassified 0.84

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065165_1000057 3300005262 Bacteria 185971
2 Ga0065715_10244582 3300005293 Unclassified 1188
3 Ga0070676_10004956 3300005328 Bacteria 7048
4 Ga0070676_10052551 3300005328 Bacteria 2396
5 Ga0070683_100011761 3300005329 Bacteria 7578
6 Ga0070690_100011856 3300005330 Bacteria 5115
7 Ga0070670_100021307 3300005331 Bacteria 5576
8 Ga0070670_100057444 3300005331 Unclassified 3340
9 Ga0068869_100046646 3300005334 Bacteria 3125
10 Ga0068869_100109377 3300005334 Bacteria 2101
11 Ga0068869_100169676 3300005334 Bacteria 1704
12 Ga0070666_10091317 3300005335 Bacteria 2092
13 Ga0070680_100025937 3300005336 Bacteria 4687
14 Ga0070680_100038477 3300005336 Bacteria 3868
15 Ga0070682_100170751 3300005337 Bacteria 1511
16 Ga0068868_100016928 3300005338 Bacteria 5423
17 Ga0068868_100194031 3300005338 Bacteria 1690
18 Ga0070689_100011496 3300005340 Bacteria 6345
19 Ga0070689_100021087 3300005340 Bacteria 4845
20 Ga0070689_100092153 3300005340 Bacteria 2390
21 Ga0070661_100004850 3300005344 Bacteria 9261
22 Ga0070661_100085002 3300005344 Bacteria 2338
23 Ga0070675_100045221 3300005354 Bacteria 3602
24 Ga0070674_100006313 3300005356 Bacteria 6905
25 Ga0070673_100017141 3300005364 Bacteria 5141
26 Ga0070673_100033593 3300005364 Bacteria 3876
27 Ga0070688_100005247 3300005365 Bacteria 6808
28 Ga0070688_100045508 3300005365 Bacteria 2712
29 Ga0070667_100082169 3300005367 Bacteria 2758
30 Ga0070667_100083556 3300005367 Bacteria 2735
31 Ga0070701_10109284 3300005438 Unclassified 1543
32 Ga0070662_100146490 3300005457 Bacteria 1835
33 Ga0070681_10165461 3300005458 Bacteria 2134
34 Ga0068867_100015280 3300005459 Bacteria 5442
35 Ga0070685_10006766 3300005466 Bacteria 5848
36 Ga0070685_10007671 3300005466 Bacteria 5523
37 Ga0070685_10022362 3300005466 Bacteria 3446
38 Ga0070706_100144027 3300005467 Unclassified 2225
39 Ga0070707_100184690 3300005468 Unclassified 2033
40 Ga0070698_100000261 3300005471 Bacteria 53090
41 Ga0070698_100322261 3300005471 Bacteria 1476
42 Ga0070699_100107988 3300005518 Unclassified 2442
43 Ga0070684_100006602 3300005535 Bacteria 8987
44 Ga0070684_100014199 3300005535 Bacteria 6443
45 Ga0068853_100020904 3300005539 Bacteria 5446
46 Ga0068853_100022951 3300005539 Bacteria 5217
47 Ga0068853_100032993 3300005539 Bacteria 4389
48 Ga0070695_100000684 3300005545 Bacteria 18106
49 Ga0068855_100003490 3300005563 Bacteria 19254
50 Ga0068855_100058474 3300005563 Bacteria 4515
51 Ga0070664_100017508 3300005564 Bacteria 5886
52 Ga0070664_100057003 3300005564 Bacteria 3320
53 Ga0070664_100104781 3300005564 Bacteria 2463
54 Ga0068857_100008967 3300005577 Bacteria 8668
55 Ga0068856_100084259 3300005614 Bacteria 3158
56 Ga0068852_100283545 3300005616 Bacteria 1598
57 Ga0068859_100003526 3300005617 Bacteria 15932
58 Ga0068859_100018301 3300005617 Bacteria 7043
59 Ga0068859_100019096 3300005617 Bacteria 6884
60 Ga0068859_100054158 3300005617 Unclassified 4034
61 Ga0068864_100034641 3300005618 Bacteria 4295
62 Ga0068866_10025879 3300005718 Bacteria 2765
63 Ga0068866_10090313 3300005718 Bacteria 1666
64 Ga0068861_100004210 3300005719 Bacteria 9652
65 Ga0068870_10092048 3300005840 Unclassified 1697
66 Ga0068863_100007966 3300005841 Bacteria 10355
67 Ga0068863_100120185 3300005841 Bacteria 2505
68 Ga0068858_100096721 3300005842 Bacteria 2752
69 Ga0081539_10042708 3300005985 Bacteria 2637
70 Ga0068871_100003925 3300006358 Bacteria 10256
71 Ga0075428_100067342 3300006844 Bacteria 3920
72 Ga0075428_100122967 3300006844 Bacteria 2825
73 Ga0075430_100002179 3300006846 Bacteria 16219
74 Ga0075431_100155684 3300006847 Bacteria 2351
75 Ga0075429_100086868 3300006880 Bacteria 2726
76 Ga0097620_100003526 3300006931 Bacteria 15932
77 Ga0097620_100018298 3300006931 Bacteria 7043
78 Ga0097620_100019096 3300006931 Bacteria 6884
79 Ga0097620_100054158 3300006931 Unclassified 4034
80 Ga0105240_10126844 3300009093 Unclassified 3065
81 Ga0111539_10012953 3300009094 Bacteria 10435
82 Ga0111539_10512274 3300009094 Bacteria 1397
83 Ga0114129_10025805 3300009147 Bacteria 8323
84 Ga0114129_10155990 3300009147 Bacteria 3122
85 Ga0105242_10015083 3300009176 Bacteria 5995
86 Ga0105242_10124243 3300009176 Bacteria 2219
87 Ga0105248_10087945 3300009177 Bacteria 3497
88 Ga0105249_10004341 3300009553 Bacteria 12267
89 Ga0105249_10017394 3300009553 Bacteria 6382
90 Ga0105249_10023217 3300009553 Bacteria 5564
91 Ga0105249_10037611 3300009553 Bacteria 4392
92 Ga0105239_10107016 3300010375 Unclassified 3098
93 Ga0105246_10101758 3300011119 Unclassified 2093
94 Ga0157373_10042396 3300013100 Bacteria 3253
95 Ga0157370_10095039 3300013104 Bacteria 2796
96 Ga0157374_10001515 3300013296 Bacteria 19575
97 Ga0157374_10143440 3300013296 Bacteria 2319
98 Ga0157374_10205327 3300013296 Bacteria 1931
99 Ga0157378_10006773 3300013297 Bacteria 10007
100 Ga0157378_10172473 3300013297 Bacteria 2029
101 Ga0157378_10211403 3300013297 Unclassified 1839
102 Ga0157378_10301512 3300013297 Bacteria 1551
103 Ga0163162_10004331 3300013306 Bacteria 13665
104 Ga0163162_10017466 3300013306 Bacteria 7019
105 Ga0163162_10020220 3300013306 Bacteria 6538
106 Ga0163162_10037431 3300013306 Bacteria 4842
107 Ga0163162_10037822 3300013306 Bacteria 4816
108 Ga0157372_10005697 3300013307 Bacteria 13258
109 Ga0157375_10024030 3300013308 Bacteria 5634
110 Ga0157375_10026627 3300013308 Bacteria 5393
111 Ga0157375_10040984 3300013308 Unclassified 4468
112 Ga0157375_10306984 3300013308 Bacteria 1751
113 Ga0163163_10000385 3300014325 Bacteria 41966
114 Ga0163163_10001057 3300014325 Bacteria 23356
115 Ga0163163_10066282 3300014325 Unclassified 3586
116 Ga0163163_10416486 3300014325 Unclassified 1402
117 Ga0157380_10038814 3300014326 Bacteria 3699
118 Ga0157377_10073156 3300014745 Bacteria 1985
119 Ga0157379_10122179 3300014968 Bacteria 2343
120 Ga0157376_10027204 3300014969 Bacteria 4530
121 Ga0157376_10054373 3300014969 Bacteria 3337
122 Ga0163161_10017397 3300017792 Bacteria 5031
123 Ga0163161_10037863 3300017792 Bacteria 3458
124 Ga0163161_10068060 3300017792 Bacteria 2601
125 Ga0209676_1000734 3300025292 Bacteria 44835
126 Ga0209050_1008751 3300025298 Bacteria 5326
127 Ga0209257_1029845 3300025304 Bacteria 1768
128 Ga0207642_10031984 3300025899 Bacteria 2210
129 Ga0207680_10033230 3300025903 Bacteria 2941
130 Ga0207647_10047280 3300025904 Bacteria 2677
131 Ga0207645_10008058 3300025907 Bacteria 7391
132 Ga0207684_10172918 3300025910 Bacteria 1862
133 Ga0207707_10272991 3300025912 Bacteria 1465
134 Ga0207660_10095030 3300025917 Bacteria 2217
135 Ga0207662_10041854 3300025918 Bacteria 2698
136 Ga0207657_10091332 3300025919 Bacteria 2539
137 Ga0207649_10114129 3300025920 Bacteria 1810
138 Ga0207681_10024523 3300025923 Bacteria 3872
139 Ga0207650_10088745 3300025925 Bacteria 2359
140 Ga0207659_10040557 3300025926 Bacteria 3256
141 Ga0207644_10018442 3300025931 Bacteria 4721
142 Ga0207706_10049993 3300025933 Bacteria 3694
143 Ga0207686_10003453 3300025934 Bacteria 8484
144 Ga0207686_10040308 3300025934 Bacteria 2839
145 Ga0207670_10027109 3300025936 Bacteria 3619
146 Ga0207670_10058240 3300025936 Bacteria 2624
147 Ga0207670_10066284 3300025936 Unclassified 2480
148 Ga0207670_10140518 3300025936 Bacteria 1780
149 Ga0207691_10176404 3300025940 Bacteria 1869
150 Ga0207691_10214925 3300025940 Bacteria 1669
151 Ga0207689_10011340 3300025942 Bacteria 7645
152 Ga0207689_10042396 3300025942 Bacteria 3765
153 Ga0207689_10093589 3300025942 Bacteria 2469
154 Ga0207689_10127573 3300025942 Bacteria 2092
155 Ga0207661_10003828 3300025944 Bacteria 10494
156 Ga0207661_10024838 3300025944 Bacteria 4548
157 Ga0207679_10018757 3300025945 Bacteria 4641
158 Ga0207679_10027865 3300025945 Bacteria 3913
159 Ga0207679_10028032 3300025945 Bacteria 3903
160 Ga0207651_10019066 3300025960 Bacteria 4100
161 Ga0207651_10297927 3300025960 Bacteria 1340
162 Ga0207712_10000728 3300025961 Bacteria 25095
163 Ga0207712_10027927 3300025961 Bacteria 3771
164 Ga0207712_10183173 3300025961 Bacteria 1647
165 Ga0207658_10031171 3300025986 Bacteria 3784
166 Ga0207677_10014980 3300026023 Bacteria 4545
167 Ga0207677_10030551 3300026023 Bacteria 3440
168 Ga0207703_10082084 3300026035 Bacteria 2689
169 Ga0207639_10020394 3300026041 Bacteria 4744
170 Ga0207639_10088080 3300026041 Unclassified 2476
171 Ga0207708_10133489 3300026075 Bacteria 1943
172 Ga0207641_10000191 3300026088 Bacteria 84147
173 Ga0207641_10120370 3300026088 Bacteria 2341
174 Ga0207648_10034658 3300026089 Bacteria 4449
175 Ga0207648_10038499 3300026089 Bacteria 4207
176 Ga0207648_10084305 3300026089 Bacteria 2772
177 Ga0207648_10097345 3300026089 Bacteria 2575
178 Ga0207676_10009951 3300026095 Bacteria 6763
179 Ga0207676_10030983 3300026095 Bacteria 4019
180 Ga0207676_10092712 3300026095 Bacteria 2485
181 Ga0207676_10201420 3300026095 Bacteria 1759
182 Ga0207674_10001086 3300026116 Bacteria 35383
183 Ga0207674_10018555 3300026116 Bacteria 7557
184 Ga0207674_10115746 3300026116 Bacteria 2653
185 Ga0207674_10252943 3300026116 Bacteria 1709
186 Ga0207675_100000153 3300026118 Bacteria 60593
187 Ga0207675_100263258 3300026118 Bacteria 1672
188 Ga0207683_10341206 3300026121 Bacteria 1374
189 Ga0207698_10093385 3300026142 Bacteria 2470
190 Ga0268264_10171465 3300028381 Bacteria 1963
191 Ga0307515_10000001 3300028794 Bacteria 4259510
192 Ga0265327_10000316 3300031251 Bacteria 92271
193 Ga0307509_10138563 3300031507 Unclassified 2373
194 Ga0307408_100000054 3300031548 Bacteria 146208
195 Ga0307408_100119811 3300031548 Bacteria 2037
196 Ga0307405_10044113 3300031731 Bacteria 2725
197 Ga0307413_10014033 3300031824 Bacteria 4052
198 Ga0307406_10014120 3300031901 Bacteria 4589
199 Ga0307406_10017050 3300031901 Bacteria 4227
200 Ga0307406_10150867 3300031901 Bacteria 1658
201 Ga0307407_10008253 3300031903 Bacteria 4770
202 Ga0307407_10177325 3300031903 Bacteria 1409
203 Ga0307412_10040137 3300031911 Bacteria 3027
204 Ga0307412_10063223 3300031911 Bacteria 2496
205 Ga0307409_100003185 3300031995 Bacteria 8820
206 Ga0307409_100153406 3300031995 Unclassified 2003
207 Ga0307416_100056355 3300032002 Bacteria 3171
208 Ga0307416_100184278 3300032002 Bacteria 1960
209 Ga0307414_10055009 3300032004 Bacteria 2784
210 Ga0307414_10137692 3300032004 Unclassified 1906
211 Ga0307411_10000343 3300032005 Bacteria 15722
212 Ga0307411_10117812 3300032005 Unclassified 1914
213 Ga0307411_10242197 3300032005 Bacteria 1413
214 Ga0307415_100020719 3300032126 Bacteria 4021
215 Ga0373935_0107244 3300035692 Bacteria 1849
216 Ga0373937_0015107 3300036401 Bacteria 6821
217 Ga0395900_0221625 3300037418 Bacteria 1906
218 Ga0395905_0100638 3300037471 Bacteria 2714
219 Ga0453683_0041337 3300044673 Bacteria 2895
220 Ga0453684_0022337 3300044712 Bacteria 9391
221 Ga0453684_0259748 3300044712 Bacteria 1990
222 Ga0453684_0394125 3300044712 Bacteria 1552
223 Ga0495594_0001389 3300046499 Bacteria 12560
224 Ga0495630_0143791 3300046517 Bacteria 1813
225 Ga0495625_0093843 3300046660 Unclassified 2071
226 Ga0495684_0050766 3300047471 Unclassified 3166
227 Ga0496110_0362715 3300048913 Bacteria 1320
228 Ga0501204_002315 3300049850 Bacteria 1925
229 nmdc:mga05p37_215489_c1 3300050507 Bacteria 2319
230 nmdc:mga0qj67_9096_c1 3300050509 Bacteria 7372
231 nmdc:mga08y16_184665_c1 3300050511 Bacteria 2164
232 nmdc:mga08y16_211550_c1 3300050511 Bacteria 2008
233 Ga0500583_0010634 3300053092 Bacteria 3425
234 Ga0500650_0021460 3300053098 Unclassified 2846
235 Ga0500589_028383 3300053147 Bacteria 2601
236 Ga0500611_000001 3300053727 Bacteria 385744

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300005344 Ga0070661_100004850 Ga0070661_1000048507 326
2 3300005539 Ga0068853_100022951 Ga0068853_1000229513 326
3 3300005334 Ga0068869_100169676 Ga0068869_1001696762 336
4 3300026089 Ga0207648_10084305 Ga0207648_100843053 336
5 3300013100 Ga0157373_10042396 Ga0157373_100423961 340
6 3300025940 Ga0207691_10214925 Ga0207691_102149252 347
7 3300005985 Ga0081539_10042708 Ga0081539_100427085 354
8 3300005328 Ga0070676_10004956 Ga0070676_100049566 358
9 3300005459 Ga0068867_100015280 Ga0068867_1000152805 358
10 3300009176 Ga0105242_10124243 Ga0105242_101242432 358
11 3300013306 Ga0163162_10004331 Ga0163162_100043314 358
12 3300025907 Ga0207645_10008058 Ga0207645_100080587 358
13 3300025942 Ga0207689_10093589 Ga0207689_100935892 358
14 3300026023 Ga0207677_10030551 Ga0207677_100305513 358
15 3300031901 Ga0307406_10014120 Ga0307406_100141202 359
16 3300031903 Ga0307407_10008253 Ga0307407_100082532 359
17 3300031995 Ga0307409_100153406 Ga0307409_1001534062 359
18 3300032002 Ga0307416_100056355 Ga0307416_1000563552 359
19 3300032004 Ga0307414_10137692 Ga0307414_101376922 359
20 3300032005 Ga0307411_10117812 Ga0307411_101178121 359
21 3300032126 Ga0307415_100020719 Ga0307415_1000207192 359
22 3300049850 Ga0501204_002315 Ga0501204_002315_64_1206 360
23 3300014325 Ga0163163_10066282 Ga0163163_100662821 362
24 3300025945 Ga0207679_10027865 Ga0207679_100278653 366
25 3300026116 Ga0207674_10252943 Ga0207674_102529432 366
26 3300005564 Ga0070664_100104781 Ga0070664_1001047812 367
27 3300009147 Ga0114129_10155990 Ga0114129_101559903 367
28 3300026095 Ga0207676_10030983 Ga0207676_100309832 368
29 3300005841 Ga0068863_100007966 Ga0068863_1000079666 371
30 3300006846 Ga0075430_100002179 Ga0075430_10000217910 371
31 3300026088 Ga0207641_10000191 Ga0207641_1000019118 371
32 3300050509 nmdc:mga0qj67_9096_c1 nmdc:mga0qj67_9096_c1_3848_4990 371
33 3300005364 Ga0070673_100033593 Ga0070673_1000335931 372
34 3300025917 Ga0207660_10095030 Ga0207660_100950302 372
35 3300011119 Ga0105246_10101758 Ga0105246_101017582 374
36 3300026116 Ga0207674_10115746 Ga0207674_101157463 374
37 3300005328 Ga0070676_10052551 Ga0070676_100525513 375
38 3300005336 Ga0070680_100025937 Ga0070680_1000259374 375
39 3300005336 Ga0070680_100038477 Ga0070680_1000384771 375
40 3300005338 Ga0068868_100194031 Ga0068868_1001940312 375
41 3300005458 Ga0070681_10165461 Ga0070681_101654612 375
42 3300005467 Ga0070706_100144027 Ga0070706_1001440272 375
43 3300005468 Ga0070707_100184690 Ga0070707_1001846902 375
44 3300005518 Ga0070699_100107988 Ga0070699_1001079881 375
45 3300005539 Ga0068853_100020904 Ga0068853_1000209043 375
46 3300005539 Ga0068853_100032993 Ga0068853_1000329933 375
47 3300005545 Ga0070695_100000684 Ga0070695_10000068417 375
48 3300005563 Ga0068855_100003490 Ga0068855_10000349020 375
49 3300005614 Ga0068856_100084259 Ga0068856_1000842591 375
50 3300005718 Ga0068866_10025879 Ga0068866_100258792 375
51 3300006880 Ga0075429_100086868 Ga0075429_1000868681 375
52 3300009093 Ga0105240_10126844 Ga0105240_101268442 375
53 3300009147 Ga0114129_10025805 Ga0114129_100258054 375
54 3300010375 Ga0105239_10107016 Ga0105239_101070163 375
55 3300013297 Ga0157378_10211403 Ga0157378_102114032 375
56 3300013307 Ga0157372_10005697 Ga0157372_1000569716 375
57 3300013308 Ga0157375_10026627 Ga0157375_100266274 375
58 3300025910 Ga0207684_10172918 Ga0207684_101729182 375
59 3300025912 Ga0207707_10272991 Ga0207707_102729912 375
60 3300025931 Ga0207644_10018442 Ga0207644_100184423 375
61 3300025940 Ga0207691_10176404 Ga0207691_101764042 375
62 3300025944 Ga0207661_10024838 Ga0207661_100248383 375
63 3300026041 Ga0207639_10088080 Ga0207639_100880803 375
64 3300031548 Ga0307408_100119811 Ga0307408_1001198111 375
65 3300031731 Ga0307405_10044113 Ga0307405_100441132 375
66 3300031824 Ga0307413_10014033 Ga0307413_100140332 375
67 3300031901 Ga0307406_10017050 Ga0307406_100170502 375
68 3300031901 Ga0307406_10150867 Ga0307406_101508672 375
69 3300031903 Ga0307407_10177325 Ga0307407_101773251 375
70 3300031911 Ga0307412_10063223 Ga0307412_100632233 375
71 3300031995 Ga0307409_100003185 Ga0307409_1000031856 375
72 3300032002 Ga0307416_100184278 Ga0307416_1001842781 375
73 3300032005 Ga0307411_10000343 Ga0307411_100003439 375
74 3300032005 Ga0307411_10242197 Ga0307411_102421971 375
75 3300035692 Ga0373935_0107244 Ga0373935_0107244_162_1304 375
76 3300037418 Ga0395900_0221625 Ga0395900_0221625_284_1450 375
77 3300037471 Ga0395905_0100638 Ga0395905_0100638_833_1972 375
78 3300046499 Ga0495594_0001389 Ga0495594_0001389_1629_2771 375
79 3300046517 Ga0495630_0143791 Ga0495630_0143791_428_1570 375
80 3300046660 Ga0495625_0093843 Ga0495625_0093843_739_1887 375
81 3300047471 Ga0495684_0050766 Ga0495684_0050766_219_1361 375
82 3300050507 nmdc:mga05p37_215489_c1 nmdc:mga05p37_215489_c1_439_1581 375
83 3300005563 Ga0068855_100058474 Ga0068855_1000584746 376
84 3300006847 Ga0075431_100155684 Ga0075431_1001556843 376
85 3300044712 Ga0453684_0259748 Ga0453684_0259748_766_1923 376
86 iso_pu_bacteria 2522125168 2522547911 376
87 3300005330 Ga0070690_100011856 Ga0070690_1000118563 377
88 3300005334 Ga0068869_100109377 Ga0068869_1001093772 377
89 3300005340 Ga0070689_100011496 Ga0070689_1000114966 377
90 3300005354 Ga0070675_100045221 Ga0070675_1000452211 377
91 3300005367 Ga0070667_100082169 Ga0070667_1000821692 377
92 3300005438 Ga0070701_10109284 Ga0070701_101092841 377
93 3300005466 Ga0070685_10006766 Ga0070685_100067664 377
94 3300005466 Ga0070685_10007671 Ga0070685_100076713 377
95 3300005471 Ga0070698_100000261 Ga0070698_10000026127 377
96 3300005617 Ga0068859_100054158 Ga0068859_1000541583 377
97 3300005840 Ga0068870_10092048 Ga0068870_100920482 377
98 3300005841 Ga0068863_100120185 Ga0068863_1001201852 377
99 3300006358 Ga0068871_100003925 Ga0068871_1000039256 377
100 3300006844 Ga0075428_100067342 Ga0075428_1000673423 377
101 3300006844 Ga0075428_100122967 Ga0075428_1001229673 377
102 3300006931 Ga0097620_100054158 Ga0097620_1000541583 377
103 3300009176 Ga0105242_10015083 Ga0105242_100150833 377
104 3300009553 Ga0105249_10017394 Ga0105249_100173945 377
105 3300009553 Ga0105249_10037611 Ga0105249_100376111 377
106 3300013297 Ga0157378_10006773 Ga0157378_100067732 377
107 3300013306 Ga0163162_10017466 Ga0163162_100174665 377
108 3300013306 Ga0163162_10037431 Ga0163162_100374313 377
109 3300013308 Ga0157375_10024030 Ga0157375_100240303 377
110 3300014325 Ga0163163_10416486 Ga0163163_104164861 377
111 3300014745 Ga0157377_10073156 Ga0157377_100731562 377
112 3300014969 Ga0157376_10027204 Ga0157376_100272044 377
113 3300017792 Ga0163161_10068060 Ga0163161_100680602 377
114 3300025918 Ga0207662_10041854 Ga0207662_100418542 377
115 3300025934 Ga0207686_10003453 Ga0207686_100034534 377
116 3300025934 Ga0207686_10040308 Ga0207686_100403082 377
117 3300025936 Ga0207670_10058240 Ga0207670_100582403 377
118 3300025936 Ga0207670_10066284 Ga0207670_100662842 377
119 3300025942 Ga0207689_10127573 Ga0207689_101275732 377
120 3300025961 Ga0207712_10000728 Ga0207712_100007285 377
121 3300025961 Ga0207712_10183173 Ga0207712_101831732 377
122 3300026088 Ga0207641_10120370 Ga0207641_101203702 377
123 3300026089 Ga0207648_10038499 Ga0207648_100384993 377
124 3300026095 Ga0207676_10201420 Ga0207676_102014201 377
125 3300026118 Ga0207675_100263258 Ga0207675_1002632582 377
126 3300026121 Ga0207683_10341206 Ga0207683_103412062 377
127 3300050511 nmdc:mga08y16_184665_c1 nmdc:mga08y16_184665_c1_683_1819 377
128 3300005293 Ga0065715_10244582 Ga0065715_102445821 378
129 3300005329 Ga0070683_100011761 Ga0070683_1000117617 378
130 3300005331 Ga0070670_100021307 Ga0070670_1000213075 378
131 3300005331 Ga0070670_100057444 Ga0070670_1000574443 378
132 3300005334 Ga0068869_100046646 Ga0068869_1000466463 378
133 3300005335 Ga0070666_10091317 Ga0070666_100913172 378
134 3300005337 Ga0070682_100170751 Ga0070682_1001707512 378
135 3300005338 Ga0068868_100016928 Ga0068868_1000169285 378
136 3300005340 Ga0070689_100021087 Ga0070689_1000210875 378
137 3300005340 Ga0070689_100092153 Ga0070689_1000921532 378
138 3300005344 Ga0070661_100085002 Ga0070661_1000850023 378
139 3300005356 Ga0070674_100006313 Ga0070674_1000063134 378
140 3300005364 Ga0070673_100017141 Ga0070673_1000171413 378
141 3300005365 Ga0070688_100005247 Ga0070688_1000052471 378
142 3300005365 Ga0070688_100045508 Ga0070688_1000455081 378
143 3300005367 Ga0070667_100083556 Ga0070667_1000835562 378
144 3300005457 Ga0070662_100146490 Ga0070662_1001464902 378
145 3300005466 Ga0070685_10022362 Ga0070685_100223624 378
146 3300005471 Ga0070698_100322261 Ga0070698_1003222611 378
147 3300005535 Ga0070684_100006602 Ga0070684_1000066027 378
148 3300005535 Ga0070684_100014199 Ga0070684_1000141994 378
149 3300005564 Ga0070664_100017508 Ga0070664_1000175083 378
150 3300005564 Ga0070664_100057003 Ga0070664_1000570033 378
151 3300005577 Ga0068857_100008967 Ga0068857_1000089671 378
152 3300005616 Ga0068852_100283545 Ga0068852_1002835452 378
153 3300005617 Ga0068859_100003526 Ga0068859_10000352611 378
154 3300005617 Ga0068859_100018301 Ga0068859_1000183012 378
155 3300005617 Ga0068859_100019096 Ga0068859_1000190962 378
156 3300005618 Ga0068864_100034641 Ga0068864_1000346413 378
157 3300005718 Ga0068866_10090313 Ga0068866_100903131 378
158 3300005719 Ga0068861_100004210 Ga0068861_1000042107 378
159 3300005842 Ga0068858_100096721 Ga0068858_1000967212 378
160 3300006931 Ga0097620_100003526 Ga0097620_10000352611 378
161 3300006931 Ga0097620_100018298 Ga0097620_1000182982 378
162 3300006931 Ga0097620_100019096 Ga0097620_1000190962 378
163 3300009094 Ga0111539_10512274 Ga0111539_105122741 378
164 3300009177 Ga0105248_10087945 Ga0105248_100879451 378
165 3300009553 Ga0105249_10004341 Ga0105249_100043413 378
166 3300009553 Ga0105249_10023217 Ga0105249_100232172 378
167 3300013296 Ga0157374_10001515 Ga0157374_1000151512 378
168 3300013296 Ga0157374_10143440 Ga0157374_101434402 378
169 3300013296 Ga0157374_10205327 Ga0157374_102053272 378
170 3300013297 Ga0157378_10172473 Ga0157378_101724731 378
171 3300013297 Ga0157378_10301512 Ga0157378_103015122 378
172 3300013306 Ga0163162_10020220 Ga0163162_100202205 378
173 3300013306 Ga0163162_10037822 Ga0163162_100378225 378
174 3300013308 Ga0157375_10040984 Ga0157375_100409843 378
175 3300013308 Ga0157375_10306984 Ga0157375_103069842 378
176 3300014325 Ga0163163_10000385 Ga0163163_1000038519 378
177 3300014325 Ga0163163_10001057 Ga0163163_100010576 378
178 3300014326 Ga0157380_10038814 Ga0157380_100388142 378
179 3300014968 Ga0157379_10122179 Ga0157379_101221792 378
180 3300014969 Ga0157376_10054373 Ga0157376_100543733 378
181 3300017792 Ga0163161_10017397 Ga0163161_100173971 378
182 3300017792 Ga0163161_10037863 Ga0163161_100378631 378
183 3300025899 Ga0207642_10031984 Ga0207642_100319842 378
184 3300025903 Ga0207680_10033230 Ga0207680_100332302 378
185 3300025904 Ga0207647_10047280 Ga0207647_100472801 378
186 3300025919 Ga0207657_10091332 Ga0207657_100913323 378
187 3300025920 Ga0207649_10114129 Ga0207649_101141292 378
188 3300025923 Ga0207681_10024523 Ga0207681_100245233 378
189 3300025925 Ga0207650_10088745 Ga0207650_100887452 378
190 3300025926 Ga0207659_10040557 Ga0207659_100405572 378
191 3300025933 Ga0207706_10049993 Ga0207706_100499933 378
192 3300025936 Ga0207670_10027109 Ga0207670_100271092 378
193 3300025936 Ga0207670_10140518 Ga0207670_101405182 378
194 3300025942 Ga0207689_10011340 Ga0207689_100113406 378
195 3300025942 Ga0207689_10042396 Ga0207689_100423962 378
196 3300025944 Ga0207661_10003828 Ga0207661_100038282 378
197 3300025945 Ga0207679_10018757 Ga0207679_100187576 378
198 3300025945 Ga0207679_10028032 Ga0207679_100280324 378
199 3300025960 Ga0207651_10019066 Ga0207651_100190663 378
200 3300025960 Ga0207651_10297927 Ga0207651_102979272 378
201 3300025961 Ga0207712_10027927 Ga0207712_100279274 378
202 3300025986 Ga0207658_10031171 Ga0207658_100311713 378
203 3300026023 Ga0207677_10014980 Ga0207677_100149804 378
204 3300026035 Ga0207703_10082084 Ga0207703_100820841 378
205 3300026041 Ga0207639_10020394 Ga0207639_100203942 378
206 3300026075 Ga0207708_10133489 Ga0207708_101334892 378
207 3300026089 Ga0207648_10034658 Ga0207648_100346583 378
208 3300026089 Ga0207648_10097345 Ga0207648_100973453 378
209 3300026095 Ga0207676_10009951 Ga0207676_100099517 378
210 3300026095 Ga0207676_10092712 Ga0207676_100927122 378
211 3300026116 Ga0207674_10001086 Ga0207674_100010862 378
212 3300026116 Ga0207674_10018555 Ga0207674_100185556 378
213 3300026118 Ga0207675_100000153 Ga0207675_10000015342 378
214 3300026142 Ga0207698_10093385 Ga0207698_100933853 378
215 3300028381 Ga0268264_10171465 Ga0268264_101714651 378
216 3300028794 Ga0307515_10000001 Ga0307515_100000011473 378
217 3300031251 Ga0265327_10000316 Ga0265327_1000031663 378
218 3300031507 Ga0307509_10138563 Ga0307509_101385632 378
219 3300031548 Ga0307408_100000054 Ga0307408_100000054106 378
220 3300036401 Ga0373937_0015107 Ga0373937_0015107_2972_4114 378
221 3300044673 Ga0453683_0041337 Ga0453683_0041337_359_1495 378
222 3300044712 Ga0453684_0022337 Ga0453684_0022337_2687_3823 378
223 3300044712 Ga0453684_0394125 Ga0453684_0394125_41_1183 378
224 3300048913 Ga0496110_0362715 Ga0496110_0362715_85_1227 378
225 3300050511 nmdc:mga08y16_211550_c1 nmdc:mga08y16_211550_c1_741_1886 378
226 3300053092 Ga0500583_0010634 Ga0500583_0010634_1485_2687 378
227 3300053098 Ga0500650_0021460 Ga0500650_0021460_1527_2669 378
228 3300053147 Ga0500589_028383 Ga0500589_028383_1007_2146 378
229 3300053727 Ga0500611_000001 Ga0500611_000001_202712_203848 378
230 3300005262 Ga0065165_1000057 Ga0065165_100005731 380
231 3300009094 Ga0111539_10012953 Ga0111539_100129538 380
232 3300013104 Ga0157370_10095039 Ga0157370_100950392 380
233 3300025292 Ga0209676_1000734 Ga0209676_100073429 380
234 3300025298 Ga0209050_1008751 Ga0209050_10087514 380
235 3300025304 Ga0209257_1029845 Ga0209257_10298452 380
236 3300031911 Ga0307412_10040137 Ga0307412_100401372 380
237 3300032004 Ga0307414_10055009 Ga0307414_100550091 380

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF11376

DUF3179

Protein of unknown function (DUF3179)

155

432

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
3c0d-assembly3.cif.gz_C crystal structure of the putative nitrite reductase nadph (small subunit) oxidoreductase protein q87hb1. northeast structural genomics consortium target vpr162 0.6745 139 222
2jo6-assembly1.cif.gz_A nmr structure of the e.coli protein nird, northeast structural genomics target et100 0.6508 140 204
4aiv-assembly1.cif.gz_A crystal structure of putative nadh-dependent nitrite reductase small subunit from mycobacterium tuberculosis 0.637 139 215
5bok-assembly1.cif.gz_A ferredoxin component of 3-nitrotoluene dioxygenase from diaphorobacter sp. strain ds2 0.6343 273 365
5cxm-assembly2.cif.gz_D crystal structure of the cyanobacterial plasma membrane rieske protein petc3 from synechocystis pcc 6803 0.6169 275 365
ID Description Score Start End Superfamily
af_Q61419_17_110_2.102.10.10 Mainly Beta;3-layer Sandwich;Rieske Iron-sulfur Protein;Rieske [2Fe-2S] iron-sulphur domain 0.6977 142 216 2.102.10.10
af_Q6DHJ3_118_252_2.102.10.10 Mainly Beta;3-layer Sandwich;Rieske Iron-sulfur Protein;Rieske [2Fe-2S] iron-sulphur domain 0.6761 140 215 2.102.10.10
af_E7F3F1_17_122_2.102.10.10 Mainly Beta;3-layer Sandwich;Rieske Iron-sulfur Protein;Rieske [2Fe-2S] iron-sulphur domain 0.6545 275 365 2.102.10.10
af_Q9NRC6_1942_2048_1.20.58.60 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1; 0.651 5 86 1.20.58.60
4aivA00 Mainly Beta;3-layer Sandwich;Rieske Iron-sulfur Protein;Rieske [2Fe-2S] iron-sulphur domain 0.637 139 215 2.102.10.10
ID Description Score Start End GO Terms
AF-A0A136M4E4-F1-model_v4 Cytochrome c domain-containing protein 0.9801 95 380 GO:0009055
GO:0020037
GO:0046872
AF-A0A7Y5MSE1-F1-model_v4 DUF3179 domain-containing protein 0.9743 124 377
AF-A0A6M8SGJ3-F1-model_v4 deleted 0.9741 2 378
AF-A0A522DN40-F1-model_v4 DUF3179 domain-containing protein 0.974 1 319 GO:0016020
AF-A0A522DN40-F1-model_v4 DUF3179 domain-containing protein 0.9709 1 319 GO:0016020

Feature Viewer

pLDDT pTM Quality
90.65 0.87 High
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Predicted Structure (AlphaFold2)

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