F350176

General Info

Members Datasets Scaffolds Average Seq Length
237 150 474 403

Family's Representative Sequence

Representative Sequence 3300035398|Ga0316574_0050357|Ga0316574_0050357_100_1449
Length 449
Sequence VSSGLRALRLTILLLAALAFIGALGAARDGPGAASVAPGEGGRWSAGPVVGPRGAEKRQDAPVPAVAALRMSAAKSTSRSDPSHTLERKLAEIVDAIRDDRPDDALRQVDSLISQHPTFRLAHLIRGDLLRARAQPLRRFGDVSKTAPQEAVDALRNEALARLDAMREPPRNGLAPRYIVKLHPAQRHALVIDSRRSRLYLFENDHGVAHLVADYYVTLGKGGVDKTREGDQKTPLGVYHVTSTLPRDKLTDFYGVGAFPINYPNAWDRRLGRNGFGIWLHGTPSDTYSRPPRASDGCIVLANPDLESVGRQVQTGLTPVIIADEIEWTTEAELTQDRRSIEAALESWRKDWESRNTDRYLTHYSPRFRSADQDYSAWSAHKHRVNAAKQWIRVGLSNTAIFRYPRERNFFVVAFDQDYRSSNLSNRMRKVQYWVNEEGHWKILYEGPA

Samples

Sample ID Description Type Environment
1 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
11 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
12 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
13 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
14 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
15 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
16 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
17 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
18 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
19 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
20 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
21 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
22 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
23 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
24 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
25 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
26 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
27 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
28 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
29 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
30 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
31 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
32 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
33 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
34 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
35 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
36 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
37 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
38 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
39 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
40 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
41 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
42 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
43 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
44 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
45 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
46 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
47 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
48 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
49 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
50 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
51 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
52 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
53 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
54 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
55 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
56 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
57 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
58 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
59 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
60 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
61 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
62 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
63 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
64 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
65 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
66 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
67 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
68 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
69 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
70 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300027543 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes) (version 2) Metagenome Rhizosphere
96 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
99 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
100 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
101 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
102 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
103 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
104 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
105 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
106 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
107 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
108 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
109 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
110 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
111 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
112 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
113 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
114 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
115 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
116 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
117 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
118 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
119 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
120 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
121 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
122 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
123 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
124 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
125 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
127 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
133 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
138 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
139 3300049656 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G3_B_0_drought Metagenome Rhizosphere
140 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
141 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
144 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
145 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
146 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
147 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
148 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
149 2547132512 Azospira oryzae 6a3 Isolate Unclassified
150 639633007 Azoarcus olearius BH72 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.16
Metatranscriptomes 0
Isolates 0.84

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.27
Nodule 0
Rhizoplane 1.27
Rhizosphere 95.78
Stem 0
Stem Tuber 0
Unclassified 2.11

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0316574_0050357 3300035398 Bacteria 2592
2 JGI25406J46586_10020295 3300003203 Bacteria 2690
3 Ga0070658_10126828 3300005327 Bacteria 2125
4 Ga0070676_10043377 3300005328 Bacteria 2614
5 Ga0070690_100036632 3300005330 Bacteria 3085
6 Ga0070690_100040045 3300005330 Bacteria 2962
7 Ga0070690_100053210 3300005330 Bacteria 2589
8 Ga0068869_100001041 3300005334 Bacteria 16142
9 Ga0068869_100096157 3300005334 Bacteria 2235
10 Ga0070680_100083005 3300005336 Bacteria 2646
11 Ga0068868_100262945 3300005338 Bacteria 1456
12 Ga0070660_100069346 3300005339 Bacteria 2749
13 Ga0070689_100007317 3300005340 Bacteria 7703
14 Ga0070689_100017271 3300005340 Bacteria 5295
15 Ga0070689_100070030 3300005340 Bacteria 2737
16 Ga0070689_100070621 3300005340 Bacteria 2727
17 Ga0070691_10013640 3300005341 Bacteria 3725
18 Ga0070687_100015970 3300005343 Bacteria 3409
19 Ga0070661_100002522 3300005344 Bacteria 12536
20 Ga0070692_10056072 3300005345 Bacteria 2062
21 Ga0070669_100133156 3300005353 Bacteria 1909
22 Ga0070675_100009054 3300005354 Bacteria 7734
23 Ga0070674_100035116 3300005356 Bacteria 3355
24 Ga0070688_100079692 3300005365 Bacteria 2117
25 Ga0070688_100127663 3300005365 Bacteria 1711
26 Ga0070659_100002994 3300005366 Bacteria 12022
27 Ga0070659_100076976 3300005366 Bacteria 2660
28 Ga0070659_100120409 3300005366 Bacteria 2125
29 Ga0070714_100001046 3300005435 Bacteria 19736
30 Ga0070701_10009318 3300005438 Bacteria 4295
31 Ga0070705_100063287 3300005440 Bacteria 2206
32 Ga0070700_100025065 3300005441 Bacteria 3509
33 Ga0070694_100012253 3300005444 Bacteria 5327
34 Ga0070694_100047517 3300005444 Bacteria 2885
35 Ga0070663_100128569 3300005455 Unclassified 1921
36 Ga0070678_100083628 3300005456 Bacteria 2426
37 Ga0068867_100002566 3300005459 Bacteria 12806
38 Ga0068867_100082604 3300005459 Bacteria 2424
39 Ga0070699_100038217 3300005518 Bacteria 4156
40 Ga0070679_100201847 3300005530 Bacteria 1954
41 Ga0070684_100023015 3300005535 Bacteria 5204
42 Ga0068853_100153325 3300005539 Bacteria 2075
43 Ga0070672_100009663 3300005543 Bacteria 6659
44 Ga0070686_100002295 3300005544 Bacteria 10553
45 Ga0070695_100105943 3300005545 Bacteria 1901
46 Ga0070695_100131571 3300005545 Bacteria 1725
47 Ga0070696_100050253 3300005546 Bacteria 2898
48 Ga0070696_100105977 3300005546 Bacteria 2020
49 Ga0070696_100113448 3300005546 Bacteria 1954
50 Ga0070693_100051454 3300005547 Bacteria 2359
51 Ga0070704_100291625 3300005549 Bacteria 1356
52 Ga0068854_100079000 3300005578 Bacteria 2425
53 Ga0070702_100044522 3300005615 Bacteria 2506
54 Ga0068866_10004377 3300005718 Bacteria 5797
55 Ga0068861_100121321 3300005719 Bacteria 2109
56 Ga0068858_100039106 3300005842 Bacteria 4400
57 Ga0068858_100235279 3300005842 Bacteria 1737
58 Ga0068858_100281311 3300005842 Bacteria 1584
59 Ga0068860_100041907 3300005843 Bacteria 4374
60 Ga0068862_100006656 3300005844 Bacteria 9585
61 Ga0081539_10000178 3300005985 Bacteria 149201
62 Ga0075432_10035184 3300006058 Bacteria 1740
63 Ga0070716_100014638 3300006173 Bacteria 4021
64 Ga0075366_10000403 3300006195 Bacteria 20185
65 Ga0097621_100079347 3300006237 Bacteria 2728
66 Ga0097621_100108411 3300006237 Bacteria 2344
67 Ga0068871_100011831 3300006358 Bacteria 6415
68 Ga0068871_100037228 3300006358 Bacteria 3879
69 Ga0075430_100007215 3300006846 Bacteria 9382
70 Ga0075433_10041054 3300006852 Bacteria 4008
71 Ga0068865_100000713 3300006881 Bacteria 18690
72 Ga0075436_100006937 3300006914 Bacteria 7751
73 Ga0099794_10016122 3300007265 Bacteria 3309
74 Ga0099794_10017807 3300007265 Bacteria 3173
75 Ga0099794_10030468 3300007265 Bacteria 2520
76 Ga0111539_10002495 3300009094 Bacteria 24393
77 Ga0105245_10004756 3300009098 Bacteria 11984
78 Ga0105245_10034762 3300009098 Bacteria 4471
79 Ga0105245_10165843 3300009098 Bacteria 2100
80 Ga0105245_10219066 3300009098 Bacteria 1835
81 Ga0105243_10003029 3300009148 Bacteria 13852
82 Ga0105242_10004877 3300009176 Bacteria 10384
83 Ga0105242_10015263 3300009176 Bacteria 5965
84 Ga0105242_10047481 3300009176 Bacteria 3486
85 Ga0105242_10111393 3300009176 Bacteria 2334
86 Ga0105248_10090974 3300009177 Bacteria 3437
87 Ga0105249_10082428 3300009553 Bacteria 2993
88 Ga0157373_10030028 3300013100 Bacteria 3912
89 Ga0157370_10004076 3300013104 Bacteria 16934
90 Ga0157374_10000600 3300013296 Bacteria 31879
91 Ga0157378_10001563 3300013297 Bacteria 20688
92 Ga0157378_10024389 3300013297 Bacteria 5321
93 Ga0157378_10024949 3300013297 Bacteria 5265
94 Ga0157378_10052343 3300013297 Bacteria 3633
95 Ga0157378_10281623 3300013297 Bacteria 1603
96 Ga0157375_10184087 3300013308 Bacteria 2241
97 Ga0157380_10175010 3300014326 Bacteria 1879
98 Ga0157380_10237208 3300014326 Bacteria 1642
99 Ga0157379_10127641 3300014968 Bacteria 2289
100 Ga0157376_10046963 3300014969 Bacteria 3563
101 Ga0157376_10138399 3300014969 Bacteria 2181
102 Ga0207642_10001226 3300025899 Bacteria 7938
103 Ga0207642_10058139 3300025899 Unclassified 1783
104 Ga0207645_10078435 3300025907 Bacteria 2116
105 Ga0207643_10040597 3300025908 Bacteria 2621
106 Ga0207707_10115447 3300025912 Bacteria 2346
107 Ga0207662_10003207 3300025918 Bacteria 8370
108 Ga0207687_10031452 3300025927 Bacteria 3587
109 Ga0207664_10019217 3300025929 Bacteria 5046
110 Ga0207686_10011933 3300025934 Bacteria 4768
111 Ga0207709_10016589 3300025935 Bacteria 4096
112 Ga0207669_10094217 3300025937 Bacteria 1959
113 Ga0207704_10007017 3300025938 Bacteria 5291
114 Ga0207665_10040447 3300025939 Bacteria 3111
115 Ga0207691_10040893 3300025940 Bacteria 4282
116 Ga0207689_10000483 3300025942 Bacteria 37602
117 Ga0207689_10121450 3300025942 Bacteria 2149
118 Ga0207679_10128673 3300025945 Bacteria 2028
119 Ga0207640_10049965 3300025981 Bacteria 2711
120 Ga0207677_10125793 3300026023 Bacteria 1937
121 Ga0207703_10107640 3300026035 Bacteria 2373
122 Ga0207703_10149369 3300026035 Bacteria 2036
123 Ga0207639_10034402 3300026041 Bacteria 3745
124 Ga0207708_10001176 3300026075 Bacteria 19697
125 Ga0207702_10142569 3300026078 Unclassified 2170
126 Ga0207648_10000988 3300026089 Bacteria 32083
127 Ga0207674_10019195 3300026116 Bacteria 7413
128 Ga0207675_100005751 3300026118 Bacteria 11862
129 Ga0207675_100163570 3300026118 Bacteria 2124
130 Ga0207683_10011810 3300026121 Bacteria 7452
131 Ga0209999_1009641 3300027543 Bacteria 1743
132 Ga0209588_1004034 3300027671 Bacteria 4110
133 Ga0268264_10061515 3300028381 Bacteria 3150
134 Ga0265336_10000808 3300028666 Bacteria 16515
135 Ga0265324_10000023 3300029957 Bacteria 164128
136 Ga0265324_10000147 3300029957 Bacteria 54400
137 Ga0265330_10027973 3300031235 Bacteria 2544
138 Ga0265332_10000013 3300031238 Bacteria 250095
139 Ga0265325_10000553 3300031241 Bacteria 27118
140 Ga0265331_10025099 3300031250 Bacteria 3010
141 Ga0265331_10031860 3300031250 Bacteria 2618
142 Ga0265327_10000739 3300031251 Bacteria 51006
143 Ga0265327_10044250 3300031251 Bacteria 2376
144 Ga0265316_10069753 3300031344 Bacteria 2712
145 Ga0265316_10115141 3300031344 Bacteria 2033
146 Ga0307509_10000006 3300031507 Bacteria 421538
147 Ga0307408_100321256 3300031548 Bacteria 1304
148 Ga0316575_10000093 3300031665 Bacteria 21743
149 Ga0265314_10000451 3300031711 Bacteria 54865
150 Ga0265314_10048933 3300031711 Bacteria 2963
151 Ga0373927_0010143 3300035695 Bacteria 6300
152 Ga0373933_0076331 3300035724 Bacteria 2047
153 Ga0395899_0003482 3300037312 Bacteria 12471
154 Ga0395900_0038998 3300037418 Bacteria 4897
155 Ga0395901_0007575 3300038443 Bacteria 10965
156 Ga0400483_080705 3300039062 Bacteria 9934
157 Ga0451577_0000013 3300042876 Bacteria 550689
158 Ga0451577_0000635 3300042876 Bacteria 56126
159 Ga0451577_0018870 3300042876 Bacteria 6348
160 Ga0451577_0046148 3300042876 Bacteria 3898
161 Ga0451577_0077673 3300042876 Bacteria 2960
162 Ga0451577_0134007 3300042876 Bacteria 2223
163 Ga0451577_0162845 3300042876 Bacteria 2009
164 Ga0451577_0269327 3300042876 Bacteria 1542
165 Ga0466972_0000087 3300044658 Bacteria 84646
166 Ga0466972_0004833 3300044658 Bacteria 6758
167 Ga0453683_0000033 3300044673 Bacteria 241479
168 Ga0466965_0000279 3300044683 Bacteria 16814
169 Ga0466964_0031289 3300044706 Bacteria 2109
170 Ga0453684_0000005 3300044712 Bacteria 1431632
171 Ga0453684_0000029 3300044712 Bacteria 757969
172 Ga0453684_0000085 3300044712 Bacteria 397817
173 Ga0453684_0000102 3300044712 Bacteria 366870
174 Ga0453684_0000195 3300044712 Bacteria 265496
175 Ga0453684_0004267 3300044712 Bacteria 30523
176 Ga0453684_0005030 3300044712 Bacteria 26843
177 Ga0453684_0005277 3300044712 Bacteria 25815
178 Ga0453684_0021720 3300044712 Bacteria 9569
179 Ga0453684_0191125 3300044712 Bacteria 2395
180 Ga0451576_0000013 3300045051 Bacteria 665120
181 Ga0451576_0000018 3300045051 Bacteria 550689
182 Ga0451576_0000386 3300045051 Bacteria 102813
183 Ga0451576_0000418 3300045051 Bacteria 98732
184 Ga0451576_0002224 3300045051 Bacteria 29850
185 Ga0451576_0003600 3300045051 Bacteria 21067
186 Ga0451576_0004022 3300045051 Bacteria 19552
187 Ga0451576_0012255 3300045051 Bacteria 9652
188 Ga0451576_0055742 3300045051 Bacteria 4134
189 Ga0451576_0064649 3300045051 Bacteria 3810
190 Ga0451576_0181521 3300045051 Bacteria 2197
191 Ga0451576_0429216 3300045051 Bacteria 1387
192 Ga0496106_0315963 3300048909 Bacteria 1254
193 Ga0496108_0054688 3300048911 Bacteria 3350
194 Ga0496108_0146206 3300048911 Unclassified 2038
195 Ga0501031_0001459 3300049568 Bacteria 14679
196 Ga0501031_0027901 3300049568 Bacteria 3679
197 Ga0501032_0003220 3300049569 Bacteria 12557
198 Ga0501032_0007898 3300049569 Bacteria 7746
199 Ga0501033_0000123 3300049570 Bacteria 74947
200 Ga0501033_0011647 3300049570 Bacteria 6725
201 Ga0501033_0024962 3300049570 Bacteria 4504
202 Ga0501034_0005866 3300049571 Bacteria 13352
203 Ga0501034_0022956 3300049571 Bacteria 6358
204 Ga0501036_0005463 3300049572 Bacteria 10303
205 Ga0501036_0008048 3300049572 Bacteria 8633
206 Ga0501037_0026421 3300049573 Bacteria 4292
207 Ga0501037_0043069 3300049573 Unclassified 3317
208 Ga0501037_0115699 3300049573 Bacteria 1930
209 Ga0501038_0009922 3300049574 Bacteria 8719
210 Ga0501038_0015224 3300049574 Bacteria 6992
211 Ga0501038_0024404 3300049574 Bacteria 5395
212 Ga0501039_0010672 3300049575 Bacteria 6997
213 Ga0501039_0011529 3300049575 Bacteria 6728
214 Ga0501040_0012441 3300049576 Bacteria 5576
215 Ga0501042_0006427 3300049578 Bacteria 7624
216 Ga0501043_0004999 3300049579 Bacteria 10730
217 Ga0501043_0122924 3300049579 Bacteria 2035
218 Ga0501046_0014445 3300049580 Bacteria 6663
219 Ga0501048_0007771 3300049582 Bacteria 8130
220 Ga0501070_0261956 3300049586 Bacteria 1413
221 Ga0501209_000186 3300049656 Bacteria 7182
222 Ga0501280_000596 3300049776 Bacteria 8316
223 Ga0501035_0003619 3300049822 Bacteria 14744
224 Ga0501035_0068697 3300049822 Bacteria 3141
225 Ga0501044_0001325 3300049823 Bacteria 29123
226 Ga0501044_0001550 3300049823 Bacteria 26951
227 Ga0501044_0008143 3300049823 Bacteria 11502
228 Ga0501044_0158036 3300049823 Bacteria 2245
229 Ga0501045_0001496 3300049824 Bacteria 15566
230 nmdc:mga0k408_3460_c1 3300050493 Bacteria 8354
231 nmdc:mga0qj67_82668_c1 3300050509 Bacteria 2575
232 nmdc:mga08y16_8182_c1 3300050511 Bacteria 10942
233 nmdc:mga0a205_252369_c1 3300050515 Bacteria 1643
234 nmdc:mga0a205_65299_c1 3300050515 Bacteria 3516
235 Ga0500636_0000541 3300053177 Bacteria 20563
236 2548846175 2547132512 Bacteria 3416496
237 639786187 639633007 Bacteria 4376040
238 Ga0316574_0050357
239 JGI25406J46586_10020295
240 Ga0070658_10126828
241 Ga0070676_10043377
242 Ga0070690_100036632
243 Ga0070690_100040045
244 Ga0070690_100053210
245 Ga0068869_100001041
246 Ga0068869_100096157
247 Ga0070680_100083005
248 Ga0068868_100262945
249 Ga0070660_100069346
250 Ga0070689_100007317
251 Ga0070689_100017271
252 Ga0070689_100070030
253 Ga0070689_100070621
254 Ga0070691_10013640
255 Ga0070687_100015970
256 Ga0070661_100002522
257 Ga0070692_10056072
258 Ga0070669_100133156
259 Ga0070675_100009054
260 Ga0070674_100035116
261 Ga0070688_100079692
262 Ga0070688_100127663
263 Ga0070659_100002994
264 Ga0070659_100076976
265 Ga0070659_100120409
266 Ga0070714_100001046
267 Ga0070701_10009318
268 Ga0070705_100063287
269 Ga0070700_100025065
270 Ga0070694_100012253
271 Ga0070694_100047517
272 Ga0070663_100128569
273 Ga0070678_100083628
274 Ga0068867_100002566
275 Ga0068867_100082604
276 Ga0070699_100038217
277 Ga0070679_100201847
278 Ga0070684_100023015
279 Ga0068853_100153325
280 Ga0070672_100009663
281 Ga0070686_100002295
282 Ga0070695_100105943
283 Ga0070695_100131571
284 Ga0070696_100050253
285 Ga0070696_100105977
286 Ga0070696_100113448
287 Ga0070693_100051454
288 Ga0070704_100291625
289 Ga0068854_100079000
290 Ga0070702_100044522
291 Ga0068866_10004377
292 Ga0068861_100121321
293 Ga0068858_100039106
294 Ga0068858_100235279
295 Ga0068858_100281311
296 Ga0068860_100041907
297 Ga0068862_100006656
298 Ga0081539_10000178
299 Ga0075432_10035184
300 Ga0070716_100014638
301 Ga0075366_10000403
302 Ga0097621_100079347
303 Ga0097621_100108411
304 Ga0068871_100011831
305 Ga0068871_100037228
306 Ga0075430_100007215
307 Ga0075433_10041054
308 Ga0068865_100000713
309 Ga0075436_100006937
310 Ga0099794_10016122
311 Ga0099794_10017807
312 Ga0099794_10030468
313 Ga0111539_10002495
314 Ga0105245_10004756
315 Ga0105245_10034762
316 Ga0105245_10165843
317 Ga0105245_10219066
318 Ga0105243_10003029
319 Ga0105242_10004877
320 Ga0105242_10015263
321 Ga0105242_10047481
322 Ga0105242_10111393
323 Ga0105248_10090974
324 Ga0105249_10082428
325 Ga0157373_10030028
326 Ga0157370_10004076
327 Ga0157374_10000600
328 Ga0157378_10001563
329 Ga0157378_10024389
330 Ga0157378_10024949
331 Ga0157378_10052343
332 Ga0157378_10281623
333 Ga0157375_10184087
334 Ga0157380_10175010
335 Ga0157380_10237208
336 Ga0157379_10127641
337 Ga0157376_10046963
338 Ga0157376_10138399
339 Ga0207642_10001226
340 Ga0207642_10058139
341 Ga0207645_10078435
342 Ga0207643_10040597
343 Ga0207707_10115447
344 Ga0207662_10003207
345 Ga0207687_10031452
346 Ga0207664_10019217
347 Ga0207686_10011933
348 Ga0207709_10016589
349 Ga0207669_10094217
350 Ga0207704_10007017
351 Ga0207665_10040447
352 Ga0207691_10040893
353 Ga0207689_10000483
354 Ga0207689_10121450
355 Ga0207679_10128673
356 Ga0207640_10049965
357 Ga0207677_10125793
358 Ga0207703_10107640
359 Ga0207703_10149369
360 Ga0207639_10034402
361 Ga0207708_10001176
362 Ga0207702_10142569
363 Ga0207648_10000988
364 Ga0207674_10019195
365 Ga0207675_100005751
366 Ga0207675_100163570
367 Ga0207683_10011810
368 Ga0209999_1009641
369 Ga0209588_1004034
370 Ga0268264_10061515
371 Ga0265336_10000808
372 Ga0265324_10000023
373 Ga0265324_10000147
374 Ga0265330_10027973
375 Ga0265332_10000013
376 Ga0265325_10000553
377 Ga0265331_10025099
378 Ga0265331_10031860
379 Ga0265327_10000739
380 Ga0265327_10044250
381 Ga0265316_10069753
382 Ga0265316_10115141
383 Ga0307509_10000006
384 Ga0307408_100321256
385 Ga0316575_10000093
386 Ga0265314_10000451
387 Ga0265314_10048933
388 Ga0373927_0010143
389 Ga0373933_0076331
390 Ga0395899_0003482
391 Ga0395900_0038998
392 Ga0395901_0007575
393 Ga0400483_080705
394 Ga0451577_0000013
395 Ga0451577_0000635
396 Ga0451577_0018870
397 Ga0451577_0046148
398 Ga0451577_0077673
399 Ga0451577_0134007
400 Ga0451577_0162845
401 Ga0451577_0269327
402 Ga0466972_0000087
403 Ga0466972_0004833
404 Ga0453683_0000033
405 Ga0466965_0000279
406 Ga0466964_0031289
407 Ga0453684_0000005
408 Ga0453684_0000029
409 Ga0453684_0000085
410 Ga0453684_0000102
411 Ga0453684_0000195
412 Ga0453684_0004267
413 Ga0453684_0005030
414 Ga0453684_0005277
415 Ga0453684_0021720
416 Ga0453684_0191125
417 Ga0451576_0000013
418 Ga0451576_0000018
419 Ga0451576_0000386
420 Ga0451576_0000418
421 Ga0451576_0002224
422 Ga0451576_0003600
423 Ga0451576_0004022
424 Ga0451576_0012255
425 Ga0451576_0055742
426 Ga0451576_0064649
427 Ga0451576_0181521
428 Ga0451576_0429216
429 Ga0496106_0315963
430 Ga0496108_0054688
431 Ga0496108_0146206
432 Ga0501031_0001459
433 Ga0501031_0027901
434 Ga0501032_0003220
435 Ga0501032_0007898
436 Ga0501033_0000123
437 Ga0501033_0011647
438 Ga0501033_0024962
439 Ga0501034_0005866
440 Ga0501034_0022956
441 Ga0501036_0005463
442 Ga0501036_0008048
443 Ga0501037_0026421
444 Ga0501037_0043069
445 Ga0501037_0115699
446 Ga0501038_0009922
447 Ga0501038_0015224
448 Ga0501038_0024404
449 Ga0501039_0010672
450 Ga0501039_0011529
451 Ga0501040_0012441
452 Ga0501042_0006427
453 Ga0501043_0004999
454 Ga0501043_0122924
455 Ga0501046_0014445
456 Ga0501048_0007771
457 Ga0501070_0261956
458 Ga0501209_000186
459 Ga0501280_000596
460 Ga0501035_0003619
461 Ga0501035_0068697
462 Ga0501044_0001325
463 Ga0501044_0001550
464 Ga0501044_0008143
465 Ga0501044_0158036
466 Ga0501045_0001496
467 nmdc:mga0k408_3460_c1
468 nmdc:mga0qj67_82668_c1
469 nmdc:mga08y16_8182_c1
470 nmdc:mga0a205_252369_c1
471 nmdc:mga0a205_65299_c1
472 Ga0500636_0000541
473 2548846175
474 639786187

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF24125

340

447

0.97

PF03734

YkuD

L,D-transpeptidase catalytic domain

187

322

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
1elw-assembly1.cif.gz_A crystal structure of the tpr1 domain of hop in complex with a hsc70 peptide 0.9675 18 65
4gyw-assembly2.cif.gz_A crystal structure of human o-glcnac transferase in complex with udp and a glycopeptide 0.9573 18 66
5hgv-assembly1.cif.gz_A structure of an o-glcnac transferase point mutant, d554n in complex with peptide 0.9546 18 66
4j8e-assembly1.cif.gz_A middle domain of hsc70-interacting protein, crystal form i 0.9536 18 65
1elw-assembly2.cif.gz_B crystal structure of the tpr1 domain of hop in complex with a hsc70 peptide 0.9534 18 66
ID Description Score Start End Superfamily
af_D4A8B1_169_244_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9857 21 66 1.25.40.10
af_Q2FYH2_121_279_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9837 16 66 1.25.40.10
af_Q96RK4_170_243_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9836 21 66 1.25.40.10
af_D4A333_877_1056_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9832 17 66 1.25.40.10
af_Q8C1Z7_170_242_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9826 21 66 1.25.40.10
ID Description Score Start End GO Terms
AF-A0A1I2H5A4-F1-model_v4 Murein L,D-transpeptidase YafK 0.9853 107 381 GO:0004180
GO:0008360
GO:0009252
GO:0016740
GO:0071555
AF-A0A2N2R422-F1-model_v4 L,D-TPase catalytic domain-containing protein 0.9847 16 381 GO:0004180
GO:0008360
GO:0009252
GO:0016740
GO:0071555
AF-A0A5C1E6K1-F1-model_v4 L,D-TPase catalytic domain-containing protein 0.9835 16 381 GO:0004180
GO:0008360
GO:0009252
GO:0016740
GO:0071555
AF-A0A1F4AIA5-F1-model_v4 L,D-TPase catalytic domain-containing protein 0.9824 14 381 GO:0004180
GO:0008360
GO:0009252
GO:0016740
GO:0071555
AF-A0A2N2REZ0-F1-model_v4 L,D-TPase catalytic domain-containing protein 0.982 22 381 GO:0004180
GO:0008360
GO:0009252
GO:0016740
GO:0071555

Map