F350262

General Info

Members Datasets Scaffolds Average Seq Length
237 184 214 448

Family's Representative Sequence

Representative Sequence 3300044901|Ga0466960_0078331|Ga0466960_0078331_220_1647
Length 475
Sequence VPRGAARPARRAAQNGEMRLKAKLLSLAAVPLLLSLALIATAVLLQQRELARREHALVEGGYVNARRAELKHYVELGVSVIRPLVDSGRDDAATREEAIRLLQSLEFGDDGYFFVYDLHGRVLMHPRQADLVGRDLWNLRDPRGRATIQELLATAHAGGGYVDYLWRRPSTGQIAPKLGYVVELPRWGWMIGTGLYRDDIDAATAQLDAQASANIHTTLLWIAAIAFGGVALISVSGVWLNLAELRVADAKLQLLARQVVRFQEDERAYLARELHDGASQTLVSAKLLVESAVDQLERERHAAPPALARALARLKESLTEVRRISHRLRPAMLDELGLPAALQLLAREFGEAGATEVDVQVEGAAFELPDEVKTALFRVAQEGLANVAKHAAAHRVRIELRFGDGGVGLRMADDGCGFEVDSVQLDPRRGIGLRNMRERLASIGGRFDVRAAPEQGTALDAWVPAEALRRLAAPA

Samples

Sample ID Description Type Environment
1 2526164512 Azovibrio restrictus DSM 23866 Isolate Unclassified
2 2585428057 Methylibium sp. YR605 Isolate Rhizosphere
3 2585428058 Methylibium sp. CF468 Isolate Rhizosphere
4 2588253510 Rhizobacter sp. OV335 Isolate Rhizosphere
5 2643221592 Rhizobacter sp. Root16D2 Isolate Unclassified
6 2643221625 Rhizobacter sp. Root29 Isolate Unclassified
7 2643221628 Variovorax sp. Root318D1 Isolate Unclassified
8 2643221648 Rhizobacter sp. Root1238 Isolate Unclassified
9 2643221658 Variovorax sp. Root411 Isolate Unclassified
10 2643221660 Methylibium sp. Root1272 Isolate Unclassified
11 2738541307 Variovorax sp. GV008 Isolate Unclassified
12 2842677519 Variovorax sp. R-72495 Isolate Unclassified
13 2842733646 Variovorax sp. R-72446 Isolate Unclassified
14 2904449895 Variovorax sp. 1763 Isolate Rhizosphere
15 2904456579 Variovorax sp. 2002 Isolate Unclassified
16 2904541872 Variovorax sp. 1615 Isolate Rhizosphere
17 2919462493 Variovorax sp. 3319 Isolate Rhizosphere
18 2928084124 Variovorax paradoxus 1218 Isolate Unclassified
19 2929160207 Variovorax sp. R-72349 Hybrid assembly Isolate Unclassified
20 2929520902 Variovorax beijingensis 502 Isolate Unclassified
21 2945945610 Variovorax paradoxus W1I18 Isolate Rhizosphere
22 2945972063 Variovorax paradoxus W2I8 Isolate Rhizosphere
23 2954767861 Variovorax sp. TBS-050B Isolate Rhizosphere
24 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
25 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
26 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
27 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
28 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
29 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
30 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
31 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
32 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
33 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
34 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
35 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
36 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
37 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
38 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
39 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
40 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
41 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
42 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
43 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
44 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
45 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
46 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
47 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
48 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
49 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
50 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
51 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
52 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
53 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
54 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
55 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
56 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
57 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
58 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
59 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
60 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
61 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
62 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
63 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
64 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
65 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
66 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
67 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
69 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
70 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
71 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
73 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
74 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
75 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
76 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
77 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
78 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
79 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
80 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
81 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
82 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
83 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
84 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
85 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
86 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
87 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
100 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
101 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
103 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
104 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
105 3300030735 Rhizosphere soil microbial communities in a healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 4 Metagenome Rhizosphere
106 3300030736 Rhizosphere soil microbial communities in healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 6 Metagenome Rhizosphere
107 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
108 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
109 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
110 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
111 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
112 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
113 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
114 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
115 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
116 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
117 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
118 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
119 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
120 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
121 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
122 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
123 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
124 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
125 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
126 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
127 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
128 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
129 3300042115 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_080116_2642 Metagenome Rhizosphere
130 3300042121 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0515D_E14_082716_2398 Metagenome Rhizosphere
131 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
132 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
133 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
134 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
135 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
136 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
137 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
138 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
139 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
140 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
141 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
142 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
143 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
144 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
145 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
146 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
147 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
148 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
149 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
150 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
151 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
152 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
153 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
154 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
155 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
156 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
157 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
158 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
159 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
160 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
161 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
162 3300049515 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_B_5_drought Metagenome Rhizosphere
163 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
164 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
165 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
166 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
167 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
168 3300049653 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_A_0_control Metagenome Rhizosphere
169 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
170 3300049759 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C13_A_4_drought Metagenome Rhizosphere
171 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
172 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
173 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
174 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
175 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
176 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
177 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
178 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
179 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
180 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
181 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
182 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
183 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
184 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 89.87
Metatranscriptomes 0.42
Isolates 9.7

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 31.65
Nodule 1.69
Rhizoplane 0.42
Rhizosphere 51.48
Stem 0
Stem Tuber 0
Unclassified 14.77

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25151J46595_10003679 3300003187 Bacteria 8345
2 JGI25153J46596_10000996 3300003215 Bacteria 17188
3 JGI25153J46596_10003477 3300003215 Bacteria 8809
4 rootL2_10013772 3300003322 Bacteria 4455
5 rootL2_10182787 3300003322 Bacteria 1885
6 rootL2_10193007 3300003322 Bacteria 2384
7 Ga0006562J51391_1126227 3300003578 Bacteria 4160
8 Ga0055533_1000011 3300003756 Bacteria 467893
9 Ga0055525_1000432 3300003759 Bacteria 24811
10 Ga0055529_1000130 3300003763 Bacteria 105654
11 Ga0055537_1000209 3300003773 Bacteria 43625
12 Ga0055524_1000267 3300003775 Bacteria 52211
13 Ga0055534_1000204 3300003784 Bacteria 43602
14 Ga0055528_1000531 3300003790 Bacteria 29380
15 Ga0055530_10003267 3300003791 Bacteria 9431
16 Ga0055540_1000016 3300003792 Bacteria 232942
17 Ga0065165_1002866 3300005262 Bacteria 13317
18 Ga0065704_10105186 3300005289 Bacteria 2118
19 Ga0070658_10099832 3300005327 Bacteria 2399
20 Ga0070660_100059874 3300005339 Bacteria 2954
21 Ga0070663_100181768 3300005455 Bacteria 1632
22 Ga0070662_100003896 3300005457 Bacteria 9355
23 Ga0068867_100000062 3300005459 Bacteria 65188
24 Ga0068867_100000085 3300005459 Bacteria 58473
25 Ga0068853_100037149 3300005539 Bacteria 4143
26 Ga0068857_100004129 3300005577 Bacteria 12238
27 Ga0068854_100003140 3300005578 Bacteria 10288
28 Ga0068852_100049710 3300005616 Bacteria 3588
29 Ga0068860_100124077 3300005843 Bacteria 2475
30 Ga0075362_10005676 3300006177 Bacteria 4589
31 Ga0075362_10018185 3300006177 Bacteria 2904
32 Ga0075369_10069018 3300006186 Bacteria 1554
33 Ga0075366_10002906 3300006195 Bacteria 8902
34 Ga0075370_10001130 3300006353 Bacteria 11191
35 Ga0075370_10001501 3300006353 Bacteria 10184
36 Ga0075370_10018647 3300006353 Bacteria 3765
37 Ga0075370_10021069 3300006353 Bacteria 3570
38 Ga0075370_10027488 3300006353 Bacteria 3156
39 Ga0079104_1000198 3300006946 Bacteria 84522
40 Ga0099826_10000909 3300006948 Bacteria 16262
41 Ga0105240_10006508 3300009093 Bacteria 17159
42 Ga0105240_10012347 3300009093 Bacteria 11794
43 Ga0114129_10069591 3300009147 Bacteria 4906
44 Ga0105243_10002446 3300009148 Bacteria 15517
45 Ga0105237_10000376 3300009545 Bacteria 63602
46 Ga0105238_10011281 3300009551 Bacteria 8992
47 Ga0105239_10002797 3300010375 Bacteria 21831
48 Ga0105239_10069027 3300010375 Bacteria 3884
49 Ga0157369_10083080 3300013105 Bacteria 3426
50 Ga0157374_10025500 3300013296 Bacteria 5309
51 Ga0157372_10326810 3300013307 Bacteria 1786
52 Ga0157377_10000027 3300014745 Bacteria 135472
53 Ga0157377_10000028 3300014745 Bacteria 134810
54 Ga0209674_100003 3300025226 Bacteria 2196646
55 Ga0209563_100010 3300025230 Bacteria 1337457
56 Ga0209258_100128 3300025242 Bacteria 177216
57 Ga0207425_1000519 3300025245 Bacteria 23496
58 Ga0209646_1000066 3300025246 Bacteria 244823
59 Ga0209026_1000027 3300025250 Bacteria 351282
60 Ga0209677_100044 3300025253 Bacteria 215799
61 Ga0209677_100118 3300025253 Bacteria 82033
62 Ga0209677_101124 3300025253 Bacteria 12538
63 Ga0209148_1002547 3300025254 Bacteria 6074
64 Ga0209759_1000131 3300025256 Bacteria 130014
65 Ga0209759_1000484 3300025256 Bacteria 43815
66 Ga0209129_1000075 3300025258 Bacteria 201273
67 Ga0209565_1000067 3300025263 Bacteria 171247
68 Ga0209455_1000116 3300025272 Bacteria 177216
69 Ga0209673_1000813 3300025273 Bacteria 41247
70 Ga0209673_1004432 3300025273 Bacteria 7527
71 Ga0209675_1000038 3300025291 Bacteria 250481
72 Ga0209675_1013428 3300025291 Bacteria 2561
73 Ga0209676_1011683 3300025292 Bacteria 3516
74 Ga0209025_1001608 3300025294 Bacteria 28307
75 Ga0209564_1000046 3300025295 Bacteria 373787
76 Ga0209758_1000052 3300025297 Bacteria 338962
77 Ga0209758_1000369 3300025297 Bacteria 79541
78 Ga0209050_1000082 3300025298 Bacteria 266864
79 Ga0209050_1000202 3300025298 Bacteria 133468
80 Ga0209050_1006480 3300025298 Bacteria 6910
81 Ga0209256_1000045 3300025299 Bacteria 325506
82 Ga0209051_1000029 3300025303 Bacteria 403675
83 Ga0209051_1000991 3300025303 Bacteria 27413
84 Ga0209051_1001306 3300025303 Bacteria 21908
85 Ga0209051_1002319 3300025303 Bacteria 13843
86 Ga0209051_1007707 3300025303 Bacteria 5838
87 Ga0209257_1000030 3300025304 Bacteria 689812
88 Ga0207695_10013202 3300025913 Bacteria 9857
89 Ga0207695_10017486 3300025913 Bacteria 8345
90 Ga0207671_10006161 3300025914 Bacteria 10777
91 Ga0207657_10133829 3300025919 Bacteria 2030
92 Ga0207694_10006375 3300025924 Bacteria 8996
93 Ga0207694_10079581 3300025924 Bacteria 2571
94 Ga0207706_10002417 3300025933 Bacteria 18219
95 Ga0207686_10000746 3300025934 Bacteria 20059
96 Ga0207709_10001891 3300025935 Bacteria 13808
97 Ga0207639_10182879 3300026041 Bacteria 1784
98 Ga0207678_10192901 3300026067 Bacteria 1741
99 Ga0207702_10000813 3300026078 Bacteria 33042
100 Ga0207648_10000146 3300026089 Bacteria 70573
101 Ga0207698_10001243 3300026142 Bacteria 14895
102 Ga0207698_10079437 3300026142 Bacteria 2639
103 Ga0207698_10097241 3300026142 Bacteria 2429
104 Ga0209281_1000457 3300027111 Bacteria 57515
105 Ga0209282_1000603 3300027666 Bacteria 17700
106 Ga0268264_10083788 3300028381 Bacteria 2732
107 Ga0307515_10001088 3300028794 Bacteria 62228
108 Ga0307515_10031822 3300028794 Bacteria 8766
109 Ga0316177_1070458 3300030731 Bacteria 5310
110 Ga0314311_1127569 3300030733 Bacteria 2552
111 Ga0316178_1146816 3300030735 Bacteria 1989
112 Ga0316180_1011075 3300030736 Bacteria 2071
113 Ga0316183_1030555 3300030742 Bacteria 5649
114 Ga0316181_1122774 3300030744 Bacteria 3656
115 Ga0307509_10052379 3300031507 Bacteria 4357
116 Ga0307509_10080320 3300031507 Bacteria 3373
117 Ga0307508_10000061 3300031616 Bacteria 124749
118 Ga0307514_10003994 3300031649 Bacteria 13768
119 Ga0307514_10005097 3300031649 Bacteria 11868
120 Ga0307514_10005215 3300031649 Bacteria 11709
121 Ga0307410_10023271 3300031852 Bacteria 3848
122 Ga0307406_10002492 3300031901 Bacteria 10032
123 Ga0307412_10007771 3300031911 Bacteria 6100
124 Ga0307412_10115570 3300031911 Bacteria 1923
125 Ga0307416_100012131 3300032002 Bacteria 5788
126 Ga0307416_100041838 3300032002 Bacteria 3572
127 Ga0307411_10021219 3300032005 Bacteria 3795
128 Ga0307411_10209973 3300032005 Bacteria 1502
129 Ga0395905_0027611 3300037471 Bacteria 5352
130 Ga0395901_0033379 3300038443 Bacteria 5313
131 Ga0436361_0244468 3300039447 Bacteria 2776
132 Ga0436361_0825367 3300039447 Bacteria 8044
133 Ga0439436_0007033 3300041404 Bacteria 3462
134 Ga0439439_0005774 3300041406 Bacteria 2841
135 Ga0439466_0013149 3300041411 Bacteria 3033
136 Ga0439431_0005448 3300041997 Bacteria 2809
137 Ga0439442_001175 3300042002 Bacteria 5216
138 Ga0439445_0006917 3300042004 Bacteria 2620
139 Ga0439432_014293 3300042006 Bacteria 2689
140 Ga0439449_0010042 3300042007 Bacteria 3581
141 Ga0439452_002933 3300042010 Bacteria 6087
142 Ga0450911_000598 3300042115 Bacteria 10980
143 Ga0450919_001123 3300042121 Bacteria 3468
144 Ga0450919_004150 3300042121 Bacteria 1778
145 Ga0450920_002801 3300042122 Bacteria 2998
146 Ga0450906_006165 3300042145 Bacteria 2429
147 Ga0439446_0005992 3300042156 Bacteria 3149
148 Ga0450908_006440 3300042184 Bacteria 2229
149 Ga0450918_006374 3300042531 Bacteria 2105
150 Ga0466969_0005259 3300044656 Bacteria 6893
151 Ga0466972_0011763 3300044658 Bacteria 4394
152 Ga0466965_0005846 3300044683 Bacteria 5551
153 Ga0466965_0056883 3300044683 Bacteria 1948
154 Ga0466966_0003476 3300044684 Bacteria 10378
155 Ga0466963_0094356 3300044694 Bacteria 2041
156 Ga0466963_0137461 3300044694 Bacteria 1691
157 Ga0466964_0010655 3300044706 Bacteria 3468
158 Ga0466971_0008094 3300044719 Bacteria 4584
159 Ga0466968_0012507 3300044735 Bacteria 3325
160 Ga0466957_0013601 3300044842 Bacteria 4723
161 Ga0466960_0030002 3300044901 Bacteria 2500
162 Ga0466960_0078331 3300044901 Bacteria 1659
163 Ga0466959_0003256 3300045049 Bacteria 10576
164 Ga0466967_0057412 3300045976 Bacteria 3436
165 Ga0495638_0049265 3300046460 Bacteria 2634
166 Ga0495650_0004672 3300046471 Bacteria 9247
167 Ga0495585_0046792 3300046492 Bacteria 2411
168 Ga0495583_0003710 3300046506 Bacteria 11358
169 Ga0495606_0002811 3300046507 Bacteria 19377
170 Ga0495632_0003371 3300046519 Bacteria 11383
171 Ga0495668_0011920 3300046616 Bacteria 5178
172 Ga0495625_0000317 3300046660 Bacteria 73568
173 Ga0495669_0013333 3300046684 Bacteria 3501
174 Ga0495649_0000622 3300046694 Bacteria 29220
175 Ga0496114_0099090 3300048917 Bacteria 2486
176 Ga0496121_0011104 3300048924 Bacteria 10053
177 Ga0496121_0014231 3300048924 Bacteria 8461
178 Ga0496125_0024089 3300048928 Bacteria 5604
179 Ga0496125_0152790 3300048928 Bacteria 1582
180 Ga0496126_0161825 3300048929 Bacteria 1912
181 Ga0501292_000588 3300049515 Bacteria 4474
182 Ga0501032_0008844 3300049569 Bacteria 7322
183 Ga0501043_0000004 3300049579 Bacteria 291085
184 Ga0501046_0000016 3300049580 Bacteria 234374
185 Ga0501047_0000012 3300049581 Bacteria 368824
186 Ga0501048_0002521 3300049582 Bacteria 13990
187 Ga0501206_003828 3300049653 Bacteria 1910
188 Ga0501249_001171 3300049679 Bacteria 5528
189 Ga0501262_000163 3300049759 Bacteria 8182
190 Ga0501045_0016671 3300049824 Bacteria 5219
191 nmdc:mga03683_12790_c1 3300050489 Bacteria 3073
192 nmdc:mga03683_36076_c1 3300050489 Bacteria 2010
193 nmdc:mga03683_64737_c1 3300050489 Bacteria 1552
194 nmdc:mga03683_70456_c1 3300050489 Bacteria 1494
195 nmdc:mga0yw44_10166_c1 3300050492 Bacteria 4795
196 nmdc:mga0k408_1332_c1 3300050493 Bacteria 13363
197 nmdc:mga0k408_54542_c1 3300050493 Bacteria 2317
198 nmdc:mga07m45_11835_c1 3300050496 Bacteria 4594
199 nmdc:mga07m45_13125_c1 3300050496 Bacteria 3558
200 nmdc:mga07m45_1388_c1 3300050496 Bacteria 11052
201 nmdc:mga07m45_17541_c1 3300050496 Bacteria 3847
202 nmdc:mga07m45_34160_c1 3300050496 Bacteria 2826
203 nmdc:mga07m45_41696_c1 3300050496 Bacteria 2571
204 nmdc:mga07m45_95415_c1 3300050496 Bacteria 1706
205 Ga0500635_0000021 3300053080 Bacteria 110194
206 Ga0500635_0007529 3300053080 Bacteria 2954
207 Ga0500578_0001398 3300053086 Bacteria 24361
208 Ga0500608_002211 3300053122 Bacteria 7016
209 Ga0500642_0000935 3300053130 Bacteria 8467
210 Ga0500652_000807 3300053131 Bacteria 10505
211 Ga0500568_0032786 3300053139 Bacteria 2134
212 Ga0500622_0000599 3300053156 Bacteria 32760
213 Ga0500636_0007053 3300053177 Bacteria 6482
214 Ga0466962_0007810 3300061719 Bacteria 5128

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300050492 nmdc:mga0yw44_10166_c1 nmdc:mga0yw44_10166_c1_3605_4780 390
2 3300006177 Ga0075362_10005676 Ga0075362_100056763 413
3 3300050489 nmdc:mga03683_36076_c1 nmdc:mga03683_36076_c1_439_1803 413
4 3300006946 Ga0079104_1000198 Ga0079104_100019843 417
5 3300027111 Ga0209281_1000457 Ga0209281_100045743 417
6 3300003792 Ga0055540_1000016 Ga0055540_100001648 420
7 3300005616 Ga0068852_100049710 Ga0068852_1000497102 420
8 3300025298 Ga0209050_1000082 Ga0209050_1000082157 420
9 3300025303 Ga0209051_1000029 Ga0209051_1000029157 420
10 3300025304 Ga0209257_1000030 Ga0209257_1000030150 420
11 3300026142 Ga0207698_10001243 Ga0207698_1000124315 420
12 3300003775 Ga0055524_1000267 Ga0055524_100026724 421
13 3300005459 Ga0068867_100000085 Ga0068867_10000008551 421
14 3300014745 Ga0157377_10000028 Ga0157377_1000002812 421
15 3300025291 Ga0209675_1013428 Ga0209675_10134282 421
16 3300025298 Ga0209050_1006480 Ga0209050_10064803 421
17 3300025299 Ga0209256_1000045 Ga0209256_100004523 421
18 3300026089 Ga0207648_10000146 Ga0207648_1000014660 421
19 3300048917 Ga0496114_0099090 Ga0496114_0099090_364_1731 421
20 3300026067 Ga0207678_10192901 Ga0207678_101929012 423
21 3300025303 Ga0209051_1002319 Ga0209051_100231918 426
22 3300031852 Ga0307410_10023271 Ga0307410_100232714 426
23 3300003773 Ga0055537_1000209 Ga0055537_100020912 427
24 3300003784 Ga0055534_1000204 Ga0055534_100020412 427
25 3300003790 Ga0055528_1000531 Ga0055528_100053117 427
26 3300025263 Ga0209565_1000067 Ga0209565_100006737 427
27 3300025273 Ga0209673_1000813 Ga0209673_100081337 427
28 3300025291 Ga0209675_1000038 Ga0209675_1000038207 427
29 3300039447 Ga0436361_0244468 Ga0436361_0244468_1195_2574 427
30 3300044901 Ga0466960_0030002 Ga0466960_0030002_502_1860 427
31 3300006186 Ga0075369_10069018 Ga0075369_100690181 431
32 3300006353 Ga0075370_10027488 Ga0075370_100274882 431
33 3300032005 Ga0307411_10021219 Ga0307411_100212192 431
34 3300050496 nmdc:mga07m45_41696_c1 nmdc:mga07m45_41696_c1_501_1865 431
35 3300003322 rootL2_10193007 rootL2_101930072 432
36 3300005457 Ga0070662_100003896 Ga0070662_1000038965 433
37 3300025933 Ga0207706_10002417 Ga0207706_100024178 433
38 3300050496 nmdc:mga07m45_95415_c1 nmdc:mga07m45_95415_c1_131_1504 433
39 3300005327 Ga0070658_10099832 Ga0070658_100998322 434
40 3300006353 Ga0075370_10018647 Ga0075370_100186472 436
41 3300030731 Ga0316177_1070458 Ga0316177_10704584 436
42 3300030733 Ga0314311_1127569 Ga0314311_11275692 436
43 3300030735 Ga0316178_1146816 Ga0316178_11468162 436
44 3300030736 Ga0316180_1011075 Ga0316180_10110752 436
45 3300030742 Ga0316183_1030555 Ga0316183_10305554 436
46 3300030744 Ga0316181_1122774 Ga0316181_11227742 436
47 3300031911 Ga0307412_10007771 Ga0307412_100077713 436
48 3300048929 Ga0496126_0161825 Ga0496126_0161825_491_1840 436
49 3300049679 Ga0501249_001171 Ga0501249_001171_2736_4100 436
50 3300050496 nmdc:mga07m45_11835_c1 nmdc:mga07m45_11835_c1_2236_3606 436
51 3300042115 Ga0450911_000598 Ga0450911_000598_8541_9890 437
52 3300048924 Ga0496121_0011104 Ga0496121_0011104_3574_4962 437
53 3300048924 Ga0496121_0014231 Ga0496121_0014231_4610_5959 437
54 3300048928 Ga0496125_0024089 Ga0496125_0024089_995_2344 437
55 3300048928 Ga0496125_0152790 Ga0496125_0152790_186_1535 437
56 iso_pu_bacteria 2585428057 2587726732 439
57 iso_pu_bacteria 2585428058 2587733230 439
58 iso_pu_bacteria 2588253510 2588294348 439
59 iso_pu_bacteria 2643221592 2643969031 439
60 iso_pu_bacteria 2643221625 2644144162 439
61 iso_pu_bacteria 2643221628 2644161979 439
62 iso_pu_bacteria 2643221648 2644273282 439
63 iso_pu_bacteria 2842677519 2842677674 439
64 iso_pu_bacteria 2842733646 2842734855 439
65 iso_pu_bacteria 2919462493 2919467061 439
66 iso_pu_bacteria 2945945610 2945946262 439
67 iso_pu_bacteria 2954767861 2954768701 439
68 3300025303 Ga0209051_1000991 Ga0209051_100099113 440
69 iso_pu_bacteria 2643221660 2644338318 440
70 3300031911 Ga0307412_10115570 Ga0307412_101155702 441
71 3300032002 Ga0307416_100012131 Ga0307416_1000121312 441
72 3300041404 Ga0439436_0007033 Ga0439436_0007033_1750_3111 441
73 3300041406 Ga0439439_0005774 Ga0439439_0005774_1090_2451 441
74 3300041411 Ga0439466_0013149 Ga0439466_0013149_229_1590 441
75 3300041997 Ga0439431_0005448 Ga0439431_0005448_889_2250 441
76 3300042004 Ga0439445_0006917 Ga0439445_0006917_947_2308 441
77 3300042006 Ga0439432_014293 Ga0439432_014293_953_2314 441
78 3300042007 Ga0439449_0010042 Ga0439449_0010042_2000_3361 441
79 3300042010 Ga0439452_002933 Ga0439452_002933_3463_4824 441
80 3300042145 Ga0450906_006165 Ga0450906_006165_321_1682 441
81 3300042156 Ga0439446_0005992 Ga0439446_0005992_1067_2428 441
82 3300042184 Ga0450908_006440 Ga0450908_006440_511_1872 441
83 iso_pu_bacteria 2904449895 2904451963 441
84 iso_pu_bacteria 2904456579 2904458891 441
85 iso_pu_bacteria 2929520902 2929523498 441
86 iso_pu_bacteria 2945972063 2945975870 441
87 3300005843 Ga0068860_100124077 Ga0068860_1001240772 442
88 3300006353 Ga0075370_10001501 Ga0075370_100015013 442
89 3300028381 Ga0268264_10083788 Ga0268264_100837882 442
90 3300044694 Ga0466963_0094356 Ga0466963_0094356_323_1690 442
91 3300050496 nmdc:mga07m45_17541_c1 nmdc:mga07m45_17541_c1_2145_3509 442
92 3300053122 Ga0500608_002211 Ga0500608_002211_261_1625 442
93 iso_pu_bacteria 2526164512 2526210503 442
94 3300003215 JGI25153J46596_10000996 JGI25153J46596_100009964 443
95 3300003215 JGI25153J46596_10003477 JGI25153J46596_100034777 443
96 3300003322 rootL2_10182787 rootL2_101827871 443
97 3300003791 Ga0055530_10003267 Ga0055530_100032675 443
98 3300005262 Ga0065165_1002866 Ga0065165_10028662 443
99 3300005455 Ga0070663_100181768 Ga0070663_1001817681 443
100 3300005539 Ga0068853_100037149 Ga0068853_1000371492 443
101 3300005577 Ga0068857_100004129 Ga0068857_1000041299 443
102 3300005578 Ga0068854_100003140 Ga0068854_1000031402 443
103 3300006353 Ga0075370_10001130 Ga0075370_100011305 443
104 3300006353 Ga0075370_10021069 Ga0075370_100210694 443
105 3300006948 Ga0099826_10000909 Ga0099826_100009099 443
106 3300009093 Ga0105240_10012347 Ga0105240_100123479 443
107 3300009545 Ga0105237_10000376 Ga0105237_1000037619 443
108 3300009551 Ga0105238_10011281 Ga0105238_100112813 443
109 3300010375 Ga0105239_10002797 Ga0105239_100027974 443
110 3300010375 Ga0105239_10069027 Ga0105239_100690273 443
111 3300013105 Ga0157369_10083080 Ga0157369_100830801 443
112 3300013307 Ga0157372_10326810 Ga0157372_103268102 443
113 3300025245 Ga0207425_1000519 Ga0207425_100051922 443
114 3300025246 Ga0209646_1000066 Ga0209646_1000066113 443
115 3300025250 Ga0209026_1000027 Ga0209026_1000027216 443
116 3300025253 Ga0209677_100118 Ga0209677_10011850 443
117 3300025256 Ga0209759_1000131 Ga0209759_100013162 443
118 3300025258 Ga0209129_1000075 Ga0209129_100007511 443
119 3300025273 Ga0209673_1004432 Ga0209673_10044326 443
120 3300025292 Ga0209676_1011683 Ga0209676_10116832 443
121 3300025295 Ga0209564_1000046 Ga0209564_1000046175 443
122 3300025297 Ga0209758_1000052 Ga0209758_1000052288 443
123 3300025297 Ga0209758_1000369 Ga0209758_100036977 443
124 3300025298 Ga0209050_1000202 Ga0209050_100020297 443
125 3300025303 Ga0209051_1001306 Ga0209051_10013069 443
126 3300025303 Ga0209051_1007707 Ga0209051_10077075 443
127 3300025913 Ga0207695_10017486 Ga0207695_100174864 443
128 3300025914 Ga0207671_10006161 Ga0207671_100061617 443
129 3300025919 Ga0207657_10133829 Ga0207657_101338292 443
130 3300025924 Ga0207694_10006375 Ga0207694_100063753 443
131 3300026041 Ga0207639_10182879 Ga0207639_101828792 443
132 3300026078 Ga0207702_10000813 Ga0207702_1000081322 443
133 3300026142 Ga0207698_10079437 Ga0207698_100794372 443
134 3300026142 Ga0207698_10097241 Ga0207698_100972412 443
135 3300027666 Ga0209282_1000603 Ga0209282_100060313 443
136 3300028794 Ga0307515_10001088 Ga0307515_100010882 443
137 3300031507 Ga0307509_10080320 Ga0307509_100803201 443
138 3300032005 Ga0307411_10209973 Ga0307411_102099731 443
139 3300039447 Ga0436361_0825367 Ga0436361_0825367_1254_2642 443
140 3300042002 Ga0439442_001175 Ga0439442_001175_722_2086 443
141 3300042121 Ga0450919_001123 Ga0450919_001123_1239_2603 443
142 3300042122 Ga0450920_002801 Ga0450920_002801_128_1492 443
143 3300042531 Ga0450918_006374 Ga0450918_006374_195_1559 443
144 3300046460 Ga0495638_0049265 Ga0495638_0049265_91_1461 443
145 3300046519 Ga0495632_0003371 Ga0495632_0003371_5923_7293 443
146 3300046660 Ga0495625_0000317 Ga0495625_0000317_10748_12112 443
147 3300049759 Ga0501262_000163 Ga0501262_000163_5667_7031 443
148 3300050489 nmdc:mga03683_64737_c1 nmdc:mga03683_64737_c1_62_1432 443
149 3300050489 nmdc:mga03683_70456_c1 nmdc:mga03683_70456_c1_20_1384 443
150 3300050493 nmdc:mga0k408_54542_c1 nmdc:mga0k408_54542_c1_137_1507 443
151 3300050496 nmdc:mga07m45_13125_c1 nmdc:mga07m45_13125_c1_132_1502 443
152 3300050496 nmdc:mga07m45_1388_c1 nmdc:mga07m45_1388_c1_247_1611 443
153 3300053086 Ga0500578_0001398 Ga0500578_0001398_1739_3109 443
154 3300053130 Ga0500642_0000935 Ga0500642_0000935_1878_3248 443
155 3300053131 Ga0500652_000807 Ga0500652_000807_1691_3061 443
156 3300053139 Ga0500568_0032786 Ga0500568_0032786_39_1409 443
157 3300053156 Ga0500622_0000599 Ga0500622_0000599_16903_18273 443
158 3300009147 Ga0114129_10069591 Ga0114129_100695912 444
159 3300013296 Ga0157374_10025500 Ga0157374_100255004 444
160 3300025253 Ga0209677_101124 Ga0209677_10112412 444
161 3300032002 Ga0307416_100041838 Ga0307416_1000418382 444
162 3300037471 Ga0395905_0027611 Ga0395905_0027611_2327_3697 444
163 3300046471 Ga0495650_0004672 Ga0495650_0004672_1420_2787 444
164 3300046506 Ga0495583_0003710 Ga0495583_0003710_68_1435 444
165 3300046507 Ga0495606_0002811 Ga0495606_0002811_7861_9228 444
166 3300046616 Ga0495668_0011920 Ga0495668_0011920_2620_3987 444
167 3300046684 Ga0495669_0013333 Ga0495669_0013333_88_1455 444
168 3300046694 Ga0495649_0000622 Ga0495649_0000622_20764_22131 444
169 3300049515 Ga0501292_000588 Ga0501292_000588_650_2020 444
170 3300049569 Ga0501032_0008844 Ga0501032_0008844_1155_2525 444
171 3300049579 Ga0501043_0000004 Ga0501043_0000004_130005_131375 444
172 3300049580 Ga0501046_0000016 Ga0501046_0000016_160461_161831 444
173 3300049581 Ga0501047_0000012 Ga0501047_0000012_160141_161511 444
174 3300049582 Ga0501048_0002521 Ga0501048_0002521_8641_10011 444
175 3300049653 Ga0501206_003828 Ga0501206_003828_402_1772 444
176 3300049824 Ga0501045_0016671 Ga0501045_0016671_2393_3763 444
177 3300053080 Ga0500635_0000021 Ga0500635_0000021_46_1413 444
178 3300053080 Ga0500635_0007529 Ga0500635_0007529_855_2231 444
179 3300053177 Ga0500636_0007053 Ga0500636_0007053_3795_5171 444
180 3300003578 Ga0006562J51391_1126227 Ga0006562J51391_11262272 445
181 3300005289 Ga0065704_10105186 Ga0065704_101051862 445
182 3300006177 Ga0075362_10018185 Ga0075362_100181852 445
183 3300031649 Ga0307514_10005097 Ga0307514_100050976 445
184 3300031901 Ga0307406_10002492 Ga0307406_100024928 445
185 3300050489 nmdc:mga03683_12790_c1 nmdc:mga03683_12790_c1_1094_2464 445
186 3300050496 nmdc:mga07m45_34160_c1 nmdc:mga07m45_34160_c1_1115_2485 445
187 3300003763 Ga0055529_1000130 Ga0055529_100013040 446
188 3300005339 Ga0070660_100059874 Ga0070660_1000598743 446
189 3300009093 Ga0105240_10006508 Ga0105240_1000650817 446
190 3300025242 Ga0209258_100128 Ga0209258_10012855 446
191 3300025254 Ga0209148_1002547 Ga0209148_10025472 446
192 3300025256 Ga0209759_1000484 Ga0209759_100048430 446
193 3300025272 Ga0209455_1000116 Ga0209455_100011655 446
194 3300025913 Ga0207695_10013202 Ga0207695_100132026 446
195 3300025924 Ga0207694_10079581 Ga0207694_100795812 446
196 3300028794 Ga0307515_10031822 Ga0307515_100318222 446
197 3300031507 Ga0307509_10052379 Ga0307509_100523792 446
198 3300031616 Ga0307508_10000061 Ga0307508_1000006127 446
199 3300031649 Ga0307514_10003994 Ga0307514_1000399410 446
200 3300042121 Ga0450919_004150 Ga0450919_004150_223_1599 446
201 3300044658 Ga0466972_0011763 Ga0466972_0011763_1861_3231 446
202 3300044683 Ga0466965_0056883 Ga0466965_0056883_281_1651 446
203 iso_pu_bacteria 2643221658 2644325358 446
204 iso_pu_bacteria 2738541307 2738882853 446
205 iso_pu_bacteria 2928084124 2928087818 446
206 3300044656 Ga0466969_0005259 Ga0466969_0005259_420_1796 447
207 3300044683 Ga0466965_0005846 Ga0466965_0005846_2935_4311 447
208 3300044684 Ga0466966_0003476 Ga0466966_0003476_1500_2876 447
209 3300044694 Ga0466963_0137461 Ga0466963_0137461_246_1622 447
210 3300044706 Ga0466964_0010655 Ga0466964_0010655_2017_3393 447
211 3300044719 Ga0466971_0008094 Ga0466971_0008094_339_1715 447
212 3300044735 Ga0466968_0012507 Ga0466968_0012507_1687_3063 447
213 3300044842 Ga0466957_0013601 Ga0466957_0013601_134_1510 447
214 3300045049 Ga0466959_0003256 Ga0466959_0003256_8248_9624 447
215 3300045976 Ga0466967_0057412 Ga0466967_0057412_1519_2898 447
216 3300046492 Ga0495585_0046792 Ga0495585_0046792_581_1957 447
217 3300061719 Ga0466962_0007810 Ga0466962_0007810_3371_4747 447
218 3300003322 rootL2_10013772 rootL2_100137724 448
219 3300005459 Ga0068867_100000062 Ga0068867_10000006247 448
220 3300009148 Ga0105243_10002446 Ga0105243_1000244614 448
221 3300014745 Ga0157377_10000027 Ga0157377_1000002758 448
222 3300025934 Ga0207686_10000746 Ga0207686_100007464 448
223 3300025935 Ga0207709_10001891 Ga0207709_1000189114 448
224 iso_pu_bacteria 2904541872 2904547395 448
225 iso_pu_bacteria 2929160207 2929165104 448
226 3300006195 Ga0075366_10002906 Ga0075366_100029069 449
227 3300050493 nmdc:mga0k408_1332_c1 nmdc:mga0k408_1332_c1_5563_6948 449
228 3300003756 Ga0055533_1000011 Ga0055533_1000011296 450
229 3300003759 Ga0055525_1000432 Ga0055525_10004324 450
230 3300025226 Ga0209674_100003 Ga0209674_100003595 450
231 3300025230 Ga0209563_100010 Ga0209563_100010325 450
232 3300025253 Ga0209677_100044 Ga0209677_10004430 450
233 3300031649 Ga0307514_10005215 Ga0307514_100052157 450
234 3300038443 Ga0395901_0033379 Ga0395901_0033379_3456_4841 450
235 3300044901 Ga0466960_0078331 Ga0466960_0078331_220_1647 450
236 3300003187 JGI25151J46595_10003679 JGI25151J46595_100036795 459
237 3300025294 Ga0209025_1001608 Ga0209025_100160820 459

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07730

HisKA_3

Histidine kinase

266

333

0.98

PF17200

sCache_2

Single Cache domain 2

63

210

0.92

PF02518

HATPase_c

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase

371

467

0.91

PF17201

Cache_3-Cache_2

Cache 3/Cache 2 fusion domain

88

210

0.91

PF08269

dCache_2

Cache domain

62

228

0.78

Feature Viewer

pLDDT pTM Quality
73.75 0.42 Low
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Predicted Structure (AlphaFold2)

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