F351940

General Info

Members Datasets Scaffolds Average Seq Length
239 160 234 484

Family's Representative Sequence

Representative Sequence 3300013297|Ga0157378_10008648|Ga0157378_100086484
Length 537
Sequence LGFIFGFLLGSWILVLGSYPIYIQNSFLGIEYLLLFADWLQKIRYMSPTVLFSFVIGYGNRSSNWLLVAFGMIGTSLSGVTFVSVPGTVGSSGFFYMQVVIGYLFGYAVIAYILLPLYYKMNLTSIYNYLEHRFGIISYKTGALFFIISRVLGATARLFLVINVMQLFILTKLHVPFGVTTFVILLMILLYTIEGGVKTIVFTDTLQTTFMLLGLIVCIVYILNSTGVGIGEAFEEMGKKDLTRIFNMNVNSPSYFLKHILGGAFIAIGMTGLDQEMMQKNISVKTLKDSQKNILTFSITMAIVNFLFLLLGGLLFLFASANNVKVSPDDLFPTVALEYLPKFVSIIFIIGLISALFPSADGALTALTSSFCIDIIGLKRRSDWDEKQKRRVRIGVHLSFALIFFLMVMIFKWIDNKSIIDVILKVAGFTYGPLLGLFAFGILTKRQINDRAALYVCLAAPLIILGIDFINNIDWYVKQWHLSGGTAESLTSFSKSVFGDFKIGYELLIYNGLLTFLGLYLISHRPPAQKATIDIVD

Samples

Sample ID Description Type Environment
1 2687453341 Pirellula sp. SH-Sr6A Isolate Unclassified
2 2840677318 Chitinophaga alhagiae T22 Isolate Unclassified
3 2896085136 Chitinophaga alhagiae T22 Isolate Unclassified
4 2896109856 Chitinophaga sp. SYP-B3965 Isolate Rhizosphere
5 2914759650 Rhizosphaericola mali Isolate Rhizosphere
6 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
7 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
8 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
9 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
10 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
11 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
12 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
13 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
14 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
15 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
16 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
17 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
18 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
19 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
20 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
21 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
22 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
23 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
24 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
25 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
26 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
27 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
28 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
29 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
30 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
31 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
32 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
33 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
34 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
35 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
36 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
37 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
38 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
39 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
40 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
41 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
42 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
43 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
44 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
45 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
46 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
47 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
48 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
49 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
50 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
51 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
52 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
53 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
55 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
56 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
57 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
58 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
59 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
60 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
61 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
62 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
63 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
64 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
65 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
66 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
67 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
68 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
69 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
70 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
71 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
72 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
73 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
74 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
75 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
76 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300027471 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 AM (SPAdes) (version 2) Metagenome Rhizosphere
103 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
105 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
106 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
107 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
108 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
109 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
110 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
111 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
112 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
113 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
114 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
115 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
116 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
117 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
118 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
119 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
120 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
121 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
122 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
123 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
124 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
125 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
126 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
127 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
128 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
129 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
130 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
131 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
132 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
133 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
134 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
135 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
138 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
139 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
140 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049649 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought Metagenome Rhizosphere
143 3300049651 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F3_A_0_drought Metagenome Rhizosphere
144 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
145 3300049653 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_A_0_control Metagenome Rhizosphere
146 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
147 3300049664 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_A_2_drought Metagenome Rhizosphere
148 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
149 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
150 3300049674 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F11_A_3_drought Metagenome Rhizosphere
151 3300049682 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F11_B_3_drought Metagenome Rhizosphere
152 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
153 3300049704 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control Metagenome Rhizosphere
154 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
155 3300049708 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D14_A_3_control Metagenome Rhizosphere
156 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
157 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
158 3300049851 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_B_0_drought Metagenome Rhizosphere
159 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
160 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.91
Metatranscriptomes 0
Isolates 2.09

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.35
Nodule 0
Rhizoplane 1.26
Rhizosphere 88.28
Stem 0
Stem Tuber 0
Unclassified 7.11

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10009025 3300003320 Bacteria 27408
2 rootH2_10172168 3300003320 Bacteria 2797
3 rootL2_10075034 3300003322 Bacteria 4823
4 rootH1_10018368 3300003323 Bacteria 11857
5 rootH1_10115100 3300003323 Bacteria 1832
6 Ga0055531_10000270 3300003794 Bacteria 53886
7 Ga0055543_1009266 3300004625 Bacteria 2126
8 Ga0065165_1000086 3300005262 Bacteria 154235
9 Ga0065712_10082089 3300005290 Bacteria 2947
10 Ga0070683_100000900 3300005329 Bacteria 22101
11 Ga0070683_100037020 3300005329 Bacteria 4465
12 Ga0070690_100007709 3300005330 Bacteria 6173
13 Ga0070670_100017090 3300005331 Bacteria 6225
14 Ga0070670_100019064 3300005331 Bacteria 5883
15 Ga0068869_100017257 3300005334 Bacteria 4889
16 Ga0068869_100030434 3300005334 Bacteria 3789
17 Ga0070666_10000165 3300005335 Bacteria 45323
18 Ga0070666_10047761 3300005335 Bacteria 2874
19 Ga0070680_100004868 3300005336 Bacteria 10108
20 Ga0070682_100000037 3300005337 Bacteria 147526
21 Ga0068868_100013122 3300005338 Bacteria 6068
22 Ga0068868_100076024 3300005338 Bacteria 2684
23 Ga0070691_10039942 3300005341 Unclassified 2217
24 Ga0070687_100074181 3300005343 Bacteria 1836
25 Ga0070675_100010652 3300005354 Bacteria 7188
26 Ga0070673_100052875 3300005364 Bacteria 3188
27 Ga0070667_100039345 3300005367 Bacteria 3963
28 Ga0070701_10058257 3300005438 Bacteria 2027
29 Ga0070678_100056196 3300005456 Bacteria 2877
30 Ga0068867_100042739 3300005459 Bacteria 3317
31 Ga0070679_100053647 3300005530 Bacteria 4013
32 Ga0070684_100003715 3300005535 Bacteria 11518
33 Ga0068853_100002721 3300005539 Bacteria 13351
34 Ga0068853_100139469 3300005539 Bacteria 2176
35 Ga0070672_100030679 3300005543 Bacteria 4041
36 Ga0070672_100053849 3300005543 Bacteria 3147
37 Ga0070665_100085284 3300005548 Bacteria 3163
38 Ga0068855_100000210 3300005563 Bacteria 74786
39 Ga0068855_100028442 3300005563 Bacteria 6687
40 Ga0068855_100155759 3300005563 Bacteria 2596
41 Ga0070664_100002699 3300005564 Bacteria 14319
42 Ga0070664_100017672 3300005564 Bacteria 5856
43 Ga0070664_100189952 3300005564 Bacteria 1830
44 Ga0068856_100021467 3300005614 Bacteria 6276
45 Ga0070702_100000948 3300005615 Bacteria 11383
46 Ga0068852_100007919 3300005616 Bacteria 7784
47 Ga0068859_100000163 3300005617 Bacteria 64401
48 Ga0068859_100021084 3300005617 Bacteria 6538
49 Ga0068864_100002828 3300005618 Bacteria 14323
50 Ga0068864_100004781 3300005618 Bacteria 11099
51 Ga0068866_10015879 3300005718 Bacteria 3354
52 Ga0068863_100000696 3300005841 Bacteria 33755
53 Ga0068858_100006245 3300005842 Bacteria 11609
54 Ga0068860_100016791 3300005843 Bacteria 7136
55 Ga0068860_100093494 3300005843 Bacteria 2866
56 Ga0075366_10034152 3300006195 Bacteria 2996
57 Ga0097621_100001082 3300006237 Bacteria 19034
58 Ga0068871_100000076 3300006358 Bacteria 55186
59 Ga0068871_100006474 3300006358 Bacteria 8288
60 Ga0068871_100016263 3300006358 Bacteria 5597
61 Ga0075428_100015310 3300006844 Bacteria 8505
62 Ga0075428_100107282 3300006844 Bacteria 3044
63 Ga0075431_100038759 3300006847 Unclassified 4909
64 Ga0068865_100027855 3300006881 Bacteria 3737
65 Ga0097620_100000163 3300006931 Bacteria 64401
66 Ga0097620_100021084 3300006931 Bacteria 6538
67 Ga0105240_10000061 3300009093 Bacteria 218897
68 Ga0111539_10042134 3300009094 Bacteria 5486
69 Ga0111539_10116702 3300009094 Unclassified 3129
70 Ga0105245_10085230 3300009098 Bacteria 2896
71 Ga0105247_10025204 3300009101 Bacteria 3588
72 Ga0105247_10078886 3300009101 Bacteria 2072
73 Ga0114129_10010429 3300009147 Bacteria 13251
74 Ga0105241_10000776 3300009174 Bacteria 24269
75 Ga0105248_10041543 3300009177 Bacteria 5156
76 Ga0105237_10003655 3300009545 Bacteria 18145
77 Ga0105249_10001077 3300009553 Bacteria 24238
78 Ga0105249_10029764 3300009553 Bacteria 4933
79 Ga0105249_10040325 3300009553 Bacteria 4240
80 Ga0105239_10386684 3300010375 Bacteria 1582
81 Ga0105246_10009671 3300011119 Bacteria 5943
82 Ga0105246_10039820 3300011119 Bacteria 3168
83 Ga0157371_10025526 3300013102 Bacteria 4305
84 Ga0157371_10128540 3300013102 Bacteria 1802
85 Ga0157370_10008901 3300013104 Bacteria 10786
86 Ga0157370_10010758 3300013104 Bacteria 9623
87 Ga0157369_10006650 3300013105 Bacteria 13358
88 Ga0157369_10071727 3300013105 Bacteria 3717
89 Ga0157374_10030791 3300013296 Bacteria 4874
90 Ga0157374_10059893 3300013296 Unclassified 3562
91 Ga0157378_10008648 3300013297 Bacteria 8861
92 Ga0157378_10022503 3300013297 Bacteria 5547
93 Ga0157378_10026651 3300013297 Bacteria 5094
94 Ga0163162_10000214 3300013306 Bacteria 53543
95 Ga0163162_10000785 3300013306 Bacteria 29535
96 Ga0163162_10003791 3300013306 Bacteria 14497
97 Ga0163162_10017550 3300013306 Bacteria 7004
98 Ga0163162_10168783 3300013306 Bacteria 2312
99 Ga0163162_10192881 3300013306 Bacteria 2165
100 Ga0163162_10271265 3300013306 Bacteria 1828
101 Ga0157372_10001349 3300013307 Bacteria 26559
102 Ga0157372_10007421 3300013307 Bacteria 11660
103 Ga0157372_10058406 3300013307 Bacteria 4312
104 Ga0157372_10133860 3300013307 Bacteria 2853
105 Ga0157372_10219816 3300013307 Bacteria 2202
106 Ga0157375_10000125 3300013308 Bacteria 75607
107 Ga0157375_10085112 3300013308 Unclassified 3212
108 Ga0157375_10148450 3300013308 Bacteria 2478
109 Ga0157375_10181333 3300013308 Bacteria 2257
110 Ga0163163_10000281 3300014325 Bacteria 50719
111 Ga0157376_10002516 3300014969 Bacteria 12416
112 Ga0157376_10020155 3300014969 Bacteria 5153
113 Ga0157376_10163264 3300014969 Bacteria 2021
114 Ga0163161_10000612 3300017792 Bacteria 28547
115 Ga0163161_10045051 3300017792 Bacteria 3179
116 Ga0213872_10000028 3300021361 Bacteria 148766
117 Ga0213872_10000398 3300021361 Bacteria 36154
118 Ga0213872_10000923 3300021361 Bacteria 20833
119 Ga0209257_1000007 3300025304 Bacteria 1564415
120 Ga0207710_10009651 3300025900 Bacteria 4054
121 Ga0207688_10032407 3300025901 Bacteria 2888
122 Ga0207680_10000068 3300025903 Bacteria 45911
123 Ga0207645_10000985 3300025907 Bacteria 23535
124 Ga0207695_10000057 3300025913 Bacteria 376090
125 Ga0207695_10000568 3300025913 Bacteria 75553
126 Ga0207671_10003201 3300025914 Bacteria 16484
127 Ga0207660_10008018 3300025917 Bacteria 6829
128 Ga0207694_10072389 3300025924 Bacteria 2695
129 Ga0207650_10007187 3300025925 Bacteria 7588
130 Ga0207650_10035549 3300025925 Bacteria 3619
131 Ga0207659_10054809 3300025926 Bacteria 2848
132 Ga0207659_10072747 3300025926 Bacteria 2514
133 Ga0207659_10138026 3300025926 Bacteria 1889
134 Ga0207644_10012876 3300025931 Bacteria 5561
135 Ga0207704_10063879 3300025938 Bacteria 2297
136 Ga0207691_10002737 3300025940 Bacteria 17206
137 Ga0207691_10024454 3300025940 Bacteria 5680
138 Ga0207691_10037973 3300025940 Bacteria 4457
139 Ga0207711_10026061 3300025941 Bacteria 4904
140 Ga0207689_10001987 3300025942 Bacteria 19318
141 Ga0207689_10036600 3300025942 Bacteria 4074
142 Ga0207661_10002589 3300025944 Bacteria 12434
143 Ga0207667_10041306 3300025949 Bacteria 4906
144 Ga0207712_10007626 3300025961 Bacteria 6840
145 Ga0207712_10033166 3300025961 Bacteria 3489
146 Ga0207640_10046550 3300025981 Bacteria 2792
147 Ga0207677_10114646 3300026023 Unclassified 2014
148 Ga0207702_10020374 3300026078 Bacteria 5493
149 Ga0207702_10103945 3300026078 Unclassified 2513
150 Ga0207641_10000176 3300026088 Bacteria 88863
151 Ga0207648_10010602 3300026089 Bacteria 8716
152 Ga0207676_10020326 3300026095 Bacteria 4857
153 Ga0207676_10134065 3300026095 Bacteria 2110
154 Ga0207683_10005839 3300026121 Bacteria 10554
155 Ga0207683_10068566 3300026121 Bacteria 3132
156 Ga0207698_10021521 3300026142 Bacteria 4462
157 Ga0209995_1006876 3300027471 Bacteria 1832
158 Ga0268264_10018258 3300028381 Bacteria 5737
159 Ga0268264_10036290 3300028381 Bacteria 4061
160 Ga0307517_10002935 3300028786 Bacteria 26992
161 Ga0307515_10020130 3300028794 Bacteria 11933
162 Ga0307515_10067251 3300028794 Bacteria 4946
163 Ga0265327_10000296 3300031251 Bacteria 96658
164 Ga0307509_10215411 3300031507 Bacteria 1740
165 Ga0307408_100036796 3300031548 Bacteria 3443
166 Ga0307508_10001291 3300031616 Bacteria 28453
167 Ga0307508_10139497 3300031616 Bacteria 2028
168 Ga0316576_10058240 3300031727 Unclassified 2826
169 Ga0307516_10000944 3300031730 Bacteria 40084
170 Ga0307413_10081091 3300031824 Bacteria 2079
171 Ga0307416_100022849 3300032002 Bacteria 4525
172 Ga0307414_10084096 3300032004 Bacteria 2339
173 Ga0316584_0061411 3300036712 Bacteria 2814
174 Ga0395898_0059677 3300037466 Unclassified 3710
175 Ga0395905_0001587 3300037471 Bacteria 27075
176 Ga0395905_0003048 3300037471 Bacteria 18147
177 Ga0395905_0037188 3300037471 Unclassified 4572
178 Ga0395901_0123489 3300038443 Unclassified 2721
179 Ga0436365_0183236 3300039437 Bacteria 3296
180 Ga0436365_0436101 3300039437 Bacteria 1898
181 Ga0436361_0201456 3300039447 Bacteria 9924
182 Ga0436361_0420505 3300039447 Bacteria 103715
183 Ga0436361_0453075 3300039447 Bacteria 45859
184 Ga0436361_0530209 3300039447 Bacteria 8517
185 Ga0439465_0010172 3300041413 Bacteria 2956
186 Ga0439457_000066 3300042014 Bacteria 22683
187 Ga0439462_0000803 3300042015 Bacteria 6533
188 Ga0451577_0000904 3300042876 Bacteria 43889
189 Ga0466972_0014019 3300044658 Bacteria 4019
190 Ga0453684_0018670 3300044712 Bacteria 10627
191 Ga0466960_0091867 3300044901 Bacteria 1549
192 Ga0466959_0026747 3300045049 Bacteria 4278
193 Ga0451576_0024759 3300045051 Bacteria 6478
194 Ga0495664_0035999 3300046477 Bacteria 2917
195 Ga0495686_0000094 3300047472 Bacteria 187720
196 Ga0496101_0076577 3300048904 Bacteria 2464
197 Ga0496104_0120789 3300048907 Bacteria 2516
198 Ga0496114_0053499 3300048917 Bacteria 3365
199 Ga0501033_0020288 3300049570 Bacteria 5021
200 Ga0501034_0004335 3300049571 Bacteria 15811
201 Ga0501034_0005604 3300049571 Bacteria 13677
202 Ga0501034_0008270 3300049571 Bacteria 11011
203 Ga0501036_0076532 3300049572 Bacteria 2830
204 Ga0501038_0098180 3300049574 Bacteria 2442
205 Ga0501039_0008959 3300049575 Bacteria 7625
206 Ga0501043_0003624 3300049579 Bacteria 12688
207 Ga0501043_0106902 3300049579 Bacteria 2197
208 Ga0501043_0107773 3300049579 Bacteria 2188
209 Ga0501046_0063117 3300049580 Bacteria 2893
210 Ga0501198_000658 3300049649 Bacteria 4296
211 Ga0501201_000141 3300049651 Bacteria 6058
212 Ga0501202_000907 3300049652 Bacteria 4533
213 Ga0501206_001109 3300049653 Bacteria 3347
214 Ga0501217_005765 3300049661 Bacteria 2603
215 Ga0501224_000390 3300049664 Bacteria 5207
216 Ga0501233_005448 3300049668 Bacteria 2363
217 Ga0501235_000771 3300049669 Bacteria 6519
218 Ga0501242_001493 3300049674 Bacteria 2361
219 Ga0501252_000330 3300049682 Bacteria 3395
220 Ga0501259_000706 3300049688 Bacteria 5401
221 Ga0501221_000952 3300049704 Bacteria 4746
222 Ga0501221_004847 3300049704 Bacteria 2237
223 Ga0501225_0003246 3300049705 Bacteria 4961
224 Ga0501245_000968 3300049708 Bacteria 3676
225 Ga0501035_0001510 3300049822 Bacteria 23798
226 Ga0501035_0040771 3300049822 Bacteria 4194
227 Ga0501044_0002356 3300049823 Bacteria 21549
228 Ga0501044_0033210 3300049823 Bacteria 5424
229 Ga0501044_0047152 3300049823 Bacteria 4458
230 Ga0501044_0091185 3300049823 Bacteria 3074
231 Ga0501212_001526 3300049851 Bacteria 2626
232 Ga0500646_0000859 3300053090 Bacteria 8418
233 Ga0500622_0002609 3300053156 Bacteria 12826
234 Ga0500622_0007905 3300053156 Bacteria 5987

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049823 Ga0501044_0091185 Ga0501044_0091185_12_1265 394
2 3300049579 Ga0501043_0106902 Ga0501043_0106902_55_1335 403
3 3300032004 Ga0307414_10084096 Ga0307414_100840961 417
4 3300005563 Ga0068855_100155759 Ga0068855_1001557592 418
5 3300041413 Ga0439465_0010172 Ga0439465_0010172_131_1519 427
6 3300031548 Ga0307408_100036796 Ga0307408_1000367963 431
7 3300049570 Ga0501033_0020288 Ga0501033_0020288_970_2349 436
8 3300003323 rootH1_10115100 rootH1_101151002 438
9 3300031507 Ga0307509_10215411 Ga0307509_102154111 438
10 3300021361 Ga0213872_10000398 Ga0213872_100003987 440
11 3300031616 Ga0307508_10139497 Ga0307508_101394971 440
12 3300039447 Ga0436361_0530209 Ga0436361_0530209_6914_8359 440
13 3300004625 Ga0055543_1009266 Ga0055543_10092662 441
14 3300005262 Ga0065165_1000086 Ga0065165_100008645 441
15 3300028794 Ga0307515_10067251 Ga0307515_100672513 441
16 3300037471 Ga0395905_0037188 Ga0395905_0037188_1240_2667 443
17 3300044901 Ga0466960_0091867 Ga0466960_0091867_103_1434 443
18 3300045051 Ga0451576_0024759 Ga0451576_0024759_4148_5554 443
19 3300031727 Ga0316576_10058240 Ga0316576_100582402 444
20 3300036712 Ga0316584_0061411 Ga0316584_0061411_192_1667 444
21 3300009101 Ga0105247_10025204 Ga0105247_100252043 446
22 3300037471 Ga0395905_0001587 Ga0395905_0001587_3922_5325 447
23 3300005617 Ga0068859_100021084 Ga0068859_1000210844 453
24 3300005618 Ga0068864_100004781 Ga0068864_1000047814 453
25 3300006931 Ga0097620_100021084 Ga0097620_1000210844 453
26 3300026095 Ga0207676_10020326 Ga0207676_100203262 453
27 3300028381 Ga0268264_10036290 Ga0268264_100362903 453
28 3300039447 Ga0436361_0201456 Ga0436361_0201456_4093_5577 453
29 3300053090 Ga0500646_0000859 Ga0500646_0000859_2329_3807 453
30 3300009094 Ga0111539_10042134 Ga0111539_100421345 454
31 3300009101 Ga0105247_10078886 Ga0105247_100788861 454
32 3300021361 Ga0213872_10000923 Ga0213872_100009237 454
33 3300025900 Ga0207710_10009651 Ga0207710_100096514 454
34 3300031616 Ga0307508_10001291 Ga0307508_1000129119 454
35 3300039447 Ga0436361_0453075 Ga0436361_0453075_3329_4801 454
36 3300013306 Ga0163162_10192881 Ga0163162_101928812 455
37 3300049649 Ga0501198_000658 Ga0501198_000658_1975_3534 455
38 3300049651 Ga0501201_000141 Ga0501201_000141_3014_4573 455
39 3300049653 Ga0501206_001109 Ga0501206_001109_1186_2745 455
40 3300049664 Ga0501224_000390 Ga0501224_000390_3152_4711 455
41 3300049668 Ga0501233_005448 Ga0501233_005448_409_1968 455
42 3300049669 Ga0501235_000771 Ga0501235_000771_4225_5784 455
43 3300049674 Ga0501242_001493 Ga0501242_001493_753_2312 455
44 3300049682 Ga0501252_000330 Ga0501252_000330_712_2271 455
45 3300049704 Ga0501221_000952 Ga0501221_000952_1806_3365 455
46 3300049705 Ga0501225_0003246 Ga0501225_0003246_663_2222 455
47 3300049851 Ga0501212_001526 Ga0501212_001526_739_2298 455
48 3300009094 Ga0111539_10116702 Ga0111539_101167022 456
49 3300003322 rootL2_10075034 rootL2_100750345 458
50 3300003794 Ga0055531_10000270 Ga0055531_100002709 458
51 3300005334 Ga0068869_100030434 Ga0068869_1000304342 458
52 3300005335 Ga0070666_10000165 Ga0070666_1000016526 458
53 3300005367 Ga0070667_100039345 Ga0070667_1000393452 458
54 3300005617 Ga0068859_100000163 Ga0068859_10000016327 458
55 3300005618 Ga0068864_100002828 Ga0068864_10000282811 458
56 3300005841 Ga0068863_100000696 Ga0068863_10000069626 458
57 3300005842 Ga0068858_100006245 Ga0068858_1000062456 458
58 3300005843 Ga0068860_100016791 Ga0068860_1000167914 458
59 3300006931 Ga0097620_100000163 Ga0097620_10000016327 458
60 3300009098 Ga0105245_10085230 Ga0105245_100852303 458
61 3300009174 Ga0105241_10000776 Ga0105241_100007768 458
62 3300009545 Ga0105237_10003655 Ga0105237_1000365511 458
63 3300009553 Ga0105249_10001077 Ga0105249_1000107717 458
64 3300010375 Ga0105239_10386684 Ga0105239_103866841 458
65 3300011119 Ga0105246_10039820 Ga0105246_100398202 458
66 3300013306 Ga0163162_10000785 Ga0163162_1000078514 458
67 3300025304 Ga0209257_1000007 Ga0209257_1000007553 458
68 3300025903 Ga0207680_10000068 Ga0207680_100000685 458
69 3300025914 Ga0207671_10003201 Ga0207671_1000320111 458
70 3300025942 Ga0207689_10001987 Ga0207689_1000198711 458
71 3300026088 Ga0207641_10000176 Ga0207641_1000017651 458
72 3300026095 Ga0207676_10134065 Ga0207676_101340651 458
73 3300028381 Ga0268264_10018258 Ga0268264_100182582 458
74 3300049571 Ga0501034_0008270 Ga0501034_0008270_5766_7271 458
75 3300049708 Ga0501245_000968 Ga0501245_000968_2119_3660 458
76 3300049822 Ga0501035_0001510 Ga0501035_0001510_9698_11203 458
77 3300049823 Ga0501044_0002356 Ga0501044_0002356_6081_7586 458
78 3300005614 Ga0068856_100021467 Ga0068856_1000214675 459
79 3300006358 Ga0068871_100016263 Ga0068871_1000162632 459
80 3300006881 Ga0068865_100027855 Ga0068865_1000278554 459
81 3300014969 Ga0157376_10002516 Ga0157376_1000251610 459
82 3300026078 Ga0207702_10020374 Ga0207702_100203743 459
83 3300049579 Ga0501043_0107773 Ga0501043_0107773_711_2159 459
84 3300006844 Ga0075428_100015310 Ga0075428_1000153102 460
85 3300009553 Ga0105249_10040325 Ga0105249_100403254 460
86 3300025961 Ga0207712_10033166 Ga0207712_100331662 460
87 3300005330 Ga0070690_100007709 Ga0070690_1000077093 462
88 3300005338 Ga0068868_100013122 Ga0068868_1000131225 462
89 3300005338 Ga0068868_100076024 Ga0068868_1000760242 462
90 3300005438 Ga0070701_10058257 Ga0070701_100582571 462
91 3300005543 Ga0070672_100030679 Ga0070672_1000306792 462
92 3300005564 Ga0070664_100017672 Ga0070664_1000176725 462
93 3300005615 Ga0070702_100000948 Ga0070702_1000009483 462
94 3300006844 Ga0075428_100107282 Ga0075428_1001072823 462
95 3300006847 Ga0075431_100038759 Ga0075431_1000387595 462
96 3300009147 Ga0114129_10010429 Ga0114129_100104292 462
97 3300009553 Ga0105249_10029764 Ga0105249_100297643 462
98 3300013297 Ga0157378_10008648 Ga0157378_100086484 462
99 3300013306 Ga0163162_10003791 Ga0163162_1000379110 462
100 3300013308 Ga0157375_10148450 Ga0157375_101484502 462
101 3300013308 Ga0157375_10181333 Ga0157375_101813331 462
102 3300017792 Ga0163161_10045051 Ga0163161_100450512 462
103 3300025926 Ga0207659_10054809 Ga0207659_100548092 462
104 3300025931 Ga0207644_10012876 Ga0207644_100128764 462
105 3300025940 Ga0207691_10002737 Ga0207691_100027373 462
106 3300025961 Ga0207712_10007626 Ga0207712_100076266 462
107 3300045049 Ga0466959_0026747 Ga0466959_0026747_883_2271 462
108 3300049688 Ga0501259_000706 Ga0501259_000706_2426_3985 463
109 3300005329 Ga0070683_100000900 Ga0070683_1000009009 464
110 3300005535 Ga0070684_100003715 Ga0070684_1000037156 464
111 3300005564 Ga0070664_100002699 Ga0070664_1000026996 464
112 3300025944 Ga0207661_10002589 Ga0207661_100025894 464
113 3300027471 Ga0209995_1006876 Ga0209995_10068761 464
114 3300037466 Ga0395898_0059677 Ga0395898_0059677_1379_2938 464
115 3300037471 Ga0395905_0003048 Ga0395905_0003048_4703_6256 464
116 3300038443 Ga0395901_0123489 Ga0395901_0123489_164_1717 464
117 3300049704 Ga0501221_004847 Ga0501221_004847_453_2012 464
118 3300013102 Ga0157371_10128540 Ga0157371_101285402 465
119 3300013308 Ga0157375_10085112 Ga0157375_100851123 465
120 3300025926 Ga0207659_10072747 Ga0207659_100727473 465
121 3300025940 Ga0207691_10037973 Ga0207691_100379734 465
122 3300026023 Ga0207677_10114646 Ga0207677_101146462 465
123 3300049661 Ga0501217_005765 Ga0501217_005765_424_1827 465
124 3300049652 Ga0501202_000907 Ga0501202_000907_3000_4505 467
125 3300013102 Ga0157371_10025526 Ga0157371_100255261 468
126 3300013307 Ga0157372_10001349 Ga0157372_1000134912 468
127 3300005290 Ga0065712_10082089 Ga0065712_100820893 469
128 3300005331 Ga0070670_100019064 Ga0070670_1000190645 469
129 3300025925 Ga0207650_10007187 Ga0207650_100071875 469
130 3300031824 Ga0307413_10081091 Ga0307413_100810912 469
131 3300032002 Ga0307416_100022849 Ga0307416_1000228494 469
132 3300039437 Ga0436365_0436101 Ga0436365_0436101_248_1663 469
133 iso_pu_bacteria 2687453341 2688393124 473
134 3300026078 Ga0207702_10103945 Ga0207702_101039451 474
135 3300044712 Ga0453684_0018670 Ga0453684_0018670_9037_10548 476
136 3300046477 Ga0495664_0035999 Ga0495664_0035999_1401_2903 476
137 3300031251 Ga0265327_10000296 Ga0265327_1000029647 477
138 3300047472 Ga0495686_0000094 Ga0495686_0000094_157300_158853 477
139 3300042014 Ga0439457_000066 Ga0439457_000066_8635_10158 478
140 3300042015 Ga0439462_0000803 Ga0439462_0000803_34_1557 478
141 3300021361 Ga0213872_10000028 Ga0213872_1000002847 479
142 3300039447 Ga0436361_0420505 Ga0436361_0420505_36187_37773 479
143 iso_pu_bacteria 2840677318 2840679473 479
144 iso_pu_bacteria 2896085136 2896087284 479
145 iso_pu_bacteria 2896109856 2896110442 479
146 3300013306 Ga0163162_10017550 Ga0163162_100175506 480
147 3300053156 Ga0500622_0007905 Ga0500622_0007905_834_2294 480
148 3300006195 Ga0075366_10034152 Ga0075366_100341522 481
149 3300028794 Ga0307515_10020130 Ga0307515_100201302 481
150 iso_pu_bacteria 2914759650 2914760516 481
151 3300005343 Ga0070687_100074181 Ga0070687_1000741811 482
152 3300042876 Ga0451577_0000904 Ga0451577_0000904_29546_31024 482
153 3300013296 Ga0157374_10059893 Ga0157374_100598931 483
154 3300049571 Ga0501034_0004335 Ga0501034_0004335_14326_15777 483
155 3300049571 Ga0501034_0005604 Ga0501034_0005604_5815_7266 483
156 3300049823 Ga0501044_0033210 Ga0501044_0033210_3780_5231 483
157 3300005331 Ga0070670_100017090 Ga0070670_1000170906 484
158 3300005334 Ga0068869_100017257 Ga0068869_1000172578 484
159 3300005335 Ga0070666_10047761 Ga0070666_100477612 484
160 3300005354 Ga0070675_100010652 Ga0070675_1000106524 484
161 3300005364 Ga0070673_100052875 Ga0070673_1000528753 484
162 3300005456 Ga0070678_100056196 Ga0070678_1000561962 484
163 3300005459 Ga0068867_100042739 Ga0068867_1000427393 484
164 3300005543 Ga0070672_100053849 Ga0070672_1000538493 484
165 3300005548 Ga0070665_100085284 Ga0070665_1000852843 484
166 3300005718 Ga0068866_10015879 Ga0068866_100158793 484
167 3300005843 Ga0068860_100093494 Ga0068860_1000934941 484
168 3300006237 Ga0097621_100001082 Ga0097621_10000108214 484
169 3300006358 Ga0068871_100000076 Ga0068871_10000007649 484
170 3300006358 Ga0068871_100006474 Ga0068871_1000064747 484
171 3300009177 Ga0105248_10041543 Ga0105248_100415435 484
172 3300011119 Ga0105246_10009671 Ga0105246_100096712 484
173 3300013296 Ga0157374_10030791 Ga0157374_100307912 484
174 3300013297 Ga0157378_10026651 Ga0157378_100266513 484
175 3300013306 Ga0163162_10000214 Ga0163162_1000021431 484
176 3300013307 Ga0157372_10007421 Ga0157372_1000742110 484
177 3300013308 Ga0157375_10000125 Ga0157375_1000012518 484
178 3300014325 Ga0163163_10000281 Ga0163163_1000028118 484
179 3300014969 Ga0157376_10020155 Ga0157376_100201552 484
180 3300017792 Ga0163161_10000612 Ga0163161_1000061214 484
181 3300025901 Ga0207688_10032407 Ga0207688_100324073 484
182 3300025907 Ga0207645_10000985 Ga0207645_1000098518 484
183 3300025925 Ga0207650_10035549 Ga0207650_100355492 484
184 3300025926 Ga0207659_10138026 Ga0207659_101380262 484
185 3300025938 Ga0207704_10063879 Ga0207704_100638792 484
186 3300025940 Ga0207691_10024454 Ga0207691_100244543 484
187 3300025941 Ga0207711_10026061 Ga0207711_100260615 484
188 3300025942 Ga0207689_10036600 Ga0207689_100366004 484
189 3300025981 Ga0207640_10046550 Ga0207640_100465502 484
190 3300026089 Ga0207648_10010602 Ga0207648_100106022 484
191 3300026121 Ga0207683_10005839 Ga0207683_100058399 484
192 3300026121 Ga0207683_10068566 Ga0207683_100685662 484
193 3300039437 Ga0436365_0183236 Ga0436365_0183236_1746_3206 484
194 3300044658 Ga0466972_0014019 Ga0466972_0014019_1594_3048 484
195 3300048904 Ga0496101_0076577 Ga0496101_0076577_409_1866 484
196 3300048907 Ga0496104_0120789 Ga0496104_0120789_545_2002 484
197 3300048917 Ga0496114_0053499 Ga0496114_0053499_563_2020 484
198 3300049572 Ga0501036_0076532 Ga0501036_0076532_354_1877 484
199 3300049574 Ga0501038_0098180 Ga0501038_0098180_304_1827 484
200 3300049575 Ga0501039_0008959 Ga0501039_0008959_1305_2828 484
201 3300049579 Ga0501043_0003624 Ga0501043_0003624_2027_3550 484
202 3300049580 Ga0501046_0063117 Ga0501046_0063117_534_2057 484
203 3300049822 Ga0501035_0040771 Ga0501035_0040771_1373_2896 484
204 3300049823 Ga0501044_0047152 Ga0501044_0047152_1716_3239 484
205 3300003323 rootH1_10018368 rootH1_100183689 485
206 3300005336 Ga0070680_100004868 Ga0070680_1000048684 485
207 3300005530 Ga0070679_100053647 Ga0070679_1000536474 485
208 3300005563 Ga0068855_100028442 Ga0068855_1000284426 485
209 3300005564 Ga0070664_100189952 Ga0070664_1001899522 485
210 3300005616 Ga0068852_100007919 Ga0068852_1000079194 485
211 3300013104 Ga0157370_10010758 Ga0157370_100107585 485
212 3300013105 Ga0157369_10006650 Ga0157369_100066508 485
213 3300013307 Ga0157372_10133860 Ga0157372_101338602 485
214 3300013307 Ga0157372_10219816 Ga0157372_102198162 485
215 3300025917 Ga0207660_10008018 Ga0207660_100080185 485
216 3300025949 Ga0207667_10041306 Ga0207667_100413064 485
217 3300026142 Ga0207698_10021521 Ga0207698_100215213 485
218 3300053156 Ga0500622_0002609 Ga0500622_0002609_1381_2874 485
219 3300013297 Ga0157378_10022503 Ga0157378_100225033 486
220 3300013306 Ga0163162_10168783 Ga0163162_101687831 486
221 3300013306 Ga0163162_10271265 Ga0163162_102712652 486
222 3300014969 Ga0157376_10163264 Ga0157376_101632642 486
223 3300005341 Ga0070691_10039942 Ga0070691_100399422 498
224 3300005539 Ga0068853_100002721 Ga0068853_1000027212 498
225 3300025924 Ga0207694_10072389 Ga0207694_100723893 498
226 3300005337 Ga0070682_100000037 Ga0070682_10000003746 499
227 3300005329 Ga0070683_100037020 Ga0070683_1000370203 502
228 3300005539 Ga0068853_100139469 Ga0068853_1001394692 502
229 3300005563 Ga0068855_100000210 Ga0068855_1000002106 502
230 3300013104 Ga0157370_10008901 Ga0157370_100089017 502
231 3300013105 Ga0157369_10071727 Ga0157369_100717273 502
232 3300013307 Ga0157372_10058406 Ga0157372_100584065 502
233 3300025913 Ga0207695_10000568 Ga0207695_100005687 502
234 3300009093 Ga0105240_10000061 Ga0105240_1000006137 503
235 3300025913 Ga0207695_10000057 Ga0207695_10000057141 503
236 3300028786 Ga0307517_10002935 Ga0307517_1000293516 503
237 3300031730 Ga0307516_10000944 Ga0307516_1000094417 503
238 3300003320 rootH2_10009025 rootH2_100090256 504
239 3300003320 rootH2_10172168 rootH2_101721683 504

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00474

SSF

Sodium:solute symporter family

57

459

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
7uuz-assembly1.cif.gz_A structure of the sodium/iodide symporter (nis) in complex with perrhenate and sodium 0.8496 6 491
5nva-assembly1.cif.gz_A substrate-bound outward-open state of a na+-coupled sialic acid symporter reveals a novel na+-site 0.8357 6 492
7sl9-assembly1.cif.gz_A cryoem structure of smct1 0.8286 7 493
8hg7-assembly1.cif.gz_A structure of human sglt2-map17 complex with sotagliflozin 0.8215 6 498
7uuy-assembly1.cif.gz_A structure of the sodium/iodide symporter (nis) 0.8122 7 501
ID Description Score Start End Superfamily
af_Q2G161_32_508_1.20.1730.10 Mainly Alpha;Up-down Bundle;Sodium/glucose cotransporter;Sodium/glucose cotransporter 0.8364 25 495 1.20.1730.10
af_Q9Y289_54_554_1.20.1730.10 Mainly Alpha;Up-down Bundle;Sodium/glucose cotransporter;Sodium/glucose cotransporter 0.8298 28 492 1.20.1730.10
af_O17394_2_448_3.40.390.10 Alpha Beta;3-Layer(aba) Sandwich;Collagenase (Catalytic Domain);Collagenase (Catalytic Domain) 0.8216 80 494 3.40.390.10
af_F1LWL8_3_419_1.20.1730.10 Mainly Alpha;Up-down Bundle;Sodium/glucose cotransporter;Sodium/glucose cotransporter 0.8205 125 498 1.20.1730.10
af_A4IG60_54_549_1.20.1730.10 Mainly Alpha;Up-down Bundle;Sodium/glucose cotransporter;Sodium/glucose cotransporter 0.8179 40 501 1.20.1730.10
ID Description Score Start End GO Terms
AF-J1FDF5-F1-model_v4 Na+/solute symporter 0.9732 49 502 GO:0005886
GO:0006814
GO:0015293
AF-A0A524H2X2-F1-model_v4 Sodium:solute symporter 0.9611 76 501 GO:0005886
GO:0006814
GO:0015293
AF-A0A257HZA6-F1-model_v4 Sodium:solute symporter 0.9598 1 503 GO:0005886
GO:0006814
GO:0015293
AF-A0A257HZA6-F1-model_v4 Sodium:solute symporter 0.9579 1 503 GO:0005886
GO:0006814
GO:0015293
AF-A0A4R6XVB0-F1-model_v4 Na+/proline symporter 0.9543 1 502 GO:0005886
GO:0006814
GO:0015293

Feature Viewer

pLDDT pTM Quality
77.31 0.78 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map