F352087

General Info

Members Datasets Scaffolds Average Seq Length
239 163 219 560

Family's Representative Sequence

Representative Sequence 3300032002|Ga0307416_100051334|Ga0307416_1000513342
Length 595
Sequence LLIPGHRWRRRSRISTFYAVPMSLRSGVGPVPDEQSRSSIREVDAIADRYVDECVTRYPEIATFLGIPDHDDSWGDYSPGGLADRVAHIRSTIAALHAAPPCDERENTAKEAMLERLGLEVELYDAHITASRVSVIGGQAQEIRSIFDLMPTDSEDAWRNIAARLRSVHQPLDQVRETLSAEAREGNISAVRQINATIEQIRSWTGETGDDDFFAGLIARAPEHDAQLLSDLSGAADEARQAFSAFADWLGTSLAPLAPSLDAVGEERYALDSRYFLGAVIDLEEAYQWGFEELHRIQEAQRAIARDLVAEPDIKAAYAALDADPARRIEGAEAFRTWMQNLADQAVANLAGKHFDIPDPIKRIECCIAPTHDGSIYYTDPAEDFSRPGQMWWAVPEGIDTFSTWKEVTTVYHEGVPGHHLQVAQNAYRSELLNRWQRKLFFCSGHGEGWALYAERLMDDLGYLESGDRMGMLDAQAFRTIRVIIDIGMHLQLQIPKINAWRFRPGERWTPAAGFEFMKDNCSADEPTLRFELNRYLGWPGQAPSYKVGERIWLEAREDARRRSGADFDLSKFHSDALNLGPMGLDPLRAALARI

Samples

Sample ID Description Type Environment
1 2515154155 Actinopolymorpha alba DSM 45243 Isolate Rhizosphere
2 2643221561 Nocardioides sp. Root151 Isolate Unclassified
3 2643221615 Nocardioides sp. Root224 Isolate Unclassified
4 2643221641 Nocardioides sp. Root122 Isolate Unclassified
5 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
6 2643221696 Nocardioides sp. Root140 Isolate Unclassified
7 2675903058 Actinopolymorpha cephalotaxi CPCC 202808 Isolate Rhizosphere
8 2739367898 Nocardioides sp. CF479 Isolate Unclassified
9 2773857762 Nocardioides sp. SAI-095 Isolate Unclassified
10 2808606439 Nocardioides sp. SLBN-172 Isolate Unclassified
11 2811994878 Nocardioides sp. SLBN-169 Isolate Unclassified
12 2816332119 Kribbella amoyensis DSM 24683 Isolate Rhizosphere
13 2827628540 Actinopolymorpha cephalotaxi DSM 45117 Isolate Rhizosphere
14 2855386786 Nocardioides ferulae EGI 63112 Isolate Unclassified
15 2857481737 Nocardioides sp. R-74106 Isolate Unclassified
16 2861520306 Phytomonospora endophytica DSM 45386 Isolate Unclassified
17 2883821847 Microlunatus elymi KUDC0627 Isolate Rhizosphere
18 2891968417 Nocardioides luteus SAI-037 Isolate Unclassified
19 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
20 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
21 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
22 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
23 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
24 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
25 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
26 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
27 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
28 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
29 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
30 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
31 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
32 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
33 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
34 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
35 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
36 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
37 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
38 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
39 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
40 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
41 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
42 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
43 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
44 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
45 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
46 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
47 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
48 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
49 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
50 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
51 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
52 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
53 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
54 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
55 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
56 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
57 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
58 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
59 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
60 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
61 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
62 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
63 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
64 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
65 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
66 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
67 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
68 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
69 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
85 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
87 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
88 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
89 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
90 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
91 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
92 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
93 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
94 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
95 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
96 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
97 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
98 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
99 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
100 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
101 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
102 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
103 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
104 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
105 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
106 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
107 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
108 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
109 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
110 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
111 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
112 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
113 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
114 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
115 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
116 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
117 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
118 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
119 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
120 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
123 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
127 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
134 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
135 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
136 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
137 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
138 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
139 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
140 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
141 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
142 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
143 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
144 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
147 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
148 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
149 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
150 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
151 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
152 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
153 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
154 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
155 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
156 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
157 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
158 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
159 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
160 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
161 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
162 8054609563 Nocardioides astragali CGMCC 4.7327 Isolate Nodule
163 8057568493 Actinorhabdospora filicis NBRC 111898 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 91.21
Metatranscriptomes 0.42
Isolates 8.37

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.51
Nodule 0.42
Rhizoplane 3.77
Rhizosphere 85.77
Stem 0
Stem Tuber 0
Unclassified 7.53

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10005282 3300003203 Bacteria 5991
2 Ga0070658_10003401 3300005327 Bacteria 13091
3 Ga0070683_100001990 3300005329 Bacteria 16022
4 Ga0070683_100028216 3300005329 Bacteria 5071
5 Ga0070670_100087412 3300005331 Bacteria 2679
6 Ga0070682_100009415 3300005337 Bacteria 5528
7 Ga0070692_10032032 3300005345 Bacteria 2640
8 Ga0070668_100000673 3300005347 Bacteria 23190
9 Ga0070668_100042333 3300005347 Bacteria 3491
10 Ga0070674_100021641 3300005356 Bacteria 4133
11 Ga0070659_100026482 3300005366 Bacteria 4463
12 Ga0070659_100091267 3300005366 Bacteria 2441
13 Ga0070714_100000592 3300005435 Bacteria 25957
14 Ga0070700_100067812 3300005441 Bacteria 2267
15 Ga0070663_100075204 3300005455 Bacteria 2468
16 Ga0068867_100011162 3300005459 Bacteria 6338
17 Ga0070699_100000014 3300005518 Bacteria 218133
18 Ga0070684_100015881 3300005535 Bacteria 6145
19 Ga0070684_100076616 3300005535 Bacteria 2952
20 Ga0070664_100040310 3300005564 Bacteria 3937
21 Ga0068857_100056182 3300005577 Bacteria 3494
22 Ga0068857_100144303 3300005577 Bacteria 2153
23 Ga0068857_100157434 3300005577 Bacteria 2060
24 Ga0068854_100056761 3300005578 Bacteria 2823
25 Ga0068856_100131564 3300005614 Bacteria 2507
26 Ga0068864_100023387 3300005618 Bacteria 5189
27 Ga0068863_100002396 3300005841 Bacteria 18648
28 Ga0081455_10000960 3300005937 Bacteria 36843
29 Ga0081455_10016587 3300005937 Bacteria 7103
30 Ga0081455_10109750 3300005937 Bacteria 2195
31 Ga0081538_10000350 3300005981 Bacteria 52656
32 Ga0081540_1006510 3300005983 Bacteria 8489
33 Ga0081539_10000208 3300005985 Bacteria 136941
34 Ga0081539_10004935 3300005985 Bacteria 14198
35 Ga0075365_10022240 3300006038 Bacteria 3970
36 Ga0075368_10000787 3300006042 Bacteria 9749
37 Ga0075432_10000656 3300006058 Bacteria 10582
38 Ga0075370_10012019 3300006353 Bacteria 4564
39 Ga0075428_100003868 3300006844 Bacteria 16449
40 Ga0075428_100011981 3300006844 Bacteria 9646
41 Ga0075431_100005313 3300006847 Bacteria 12699
42 Ga0075431_100037637 3300006847 Bacteria 4982
43 Ga0075433_10036532 3300006852 Bacteria 4233
44 Ga0075433_10037986 3300006852 Bacteria 4156
45 Ga0075434_100002464 3300006871 Bacteria 16286
46 Ga0075434_100009840 3300006871 Bacteria 8940
47 Ga0075429_100027856 3300006880 Bacteria 4905
48 Ga0075429_100068175 3300006880 Bacteria 3096
49 Ga0075435_100003711 3300007076 Bacteria 10401
50 Ga0075435_100016791 3300007076 Bacteria 5523
51 Ga0111539_10001067 3300009094 Bacteria 36168
52 Ga0111539_10079243 3300009094 Bacteria 3864
53 Ga0105245_10012554 3300009098 Bacteria 7372
54 Ga0105245_10014413 3300009098 Bacteria 6887
55 Ga0114129_10004878 3300009147 Bacteria 18928
56 Ga0114129_10004970 3300009147 Bacteria 18736
57 Ga0114129_10137314 3300009147 Bacteria 3354
58 Ga0105243_10038836 3300009148 Bacteria 3709
59 Ga0105242_10008765 3300009176 Bacteria 7760
60 Ga0105238_10091738 3300009551 Bacteria 3025
61 Ga0105249_10064316 3300009553 Bacteria 3372
62 Ga0105239_10049935 3300010375 Bacteria 4588
63 Ga0157370_10068061 3300013104 Bacteria 3365
64 Ga0157369_10035215 3300013105 Bacteria 5490
65 Ga0157378_10139451 3300013297 Bacteria 2251
66 Ga0157372_10172540 3300013307 Bacteria 2502
67 Ga0157372_10192182 3300013307 Bacteria 2364
68 Ga0163163_10011714 3300014325 Bacteria 7966
69 Ga0157380_10051811 3300014326 Bacteria 3248
70 Ga0206353_11426036 3300020082 Bacteria 3131
71 Ga0207688_10019181 3300025901 Bacteria 3723
72 Ga0207647_10010750 3300025904 Bacteria 6446
73 Ga0207699_10012489 3300025906 Bacteria 4322
74 Ga0207687_10044426 3300025927 Bacteria 3066
75 Ga0207690_10077626 3300025932 Bacteria 2309
76 Ga0207706_10021400 3300025933 Bacteria 5809
77 Ga0207686_10026447 3300025934 Bacteria 3384
78 Ga0207661_10004266 3300025944 Bacteria 10010
79 Ga0207712_10086492 3300025961 Bacteria 2296
80 Ga0207668_10001731 3300025972 Bacteria 12781
81 Ga0207668_10014028 3300025972 Bacteria 4954
82 Ga0207708_10102770 3300026075 Bacteria 2213
83 Ga0207641_10010453 3300026088 Bacteria 7628
84 Ga0207676_10058763 3300026095 Bacteria 3035
85 Ga0207674_10066132 3300026116 Bacteria 3642
86 Ga0207674_10071647 3300026116 Bacteria 3482
87 Ga0207674_10141156 3300026116 Bacteria 2368
88 Ga0207675_100132608 3300026118 Bacteria 2362
89 Ga0207428_10005586 3300027907 Bacteria 11694
90 Ga0207428_10034106 3300027907 Bacteria 4174
91 Ga0268264_10000687 3300028381 Bacteria 39363
92 Ga0307515_10009874 3300028794 Bacteria 18388
93 Ga0307408_100004134 3300031548 Bacteria 9882
94 Ga0307408_100148117 3300031548 Bacteria 1850
95 Ga0307508_10040871 3300031616 Bacteria 4163
96 Ga0307516_10000954 3300031730 Bacteria 39876
97 Ga0307405_10000253 3300031731 Bacteria 19492
98 Ga0307405_10002681 3300031731 Bacteria 7933
99 Ga0307413_10000542 3300031824 Bacteria 12560
100 Ga0307410_10001896 3300031852 Bacteria 9782
101 Ga0307410_10010228 3300031852 Bacteria 5302
102 Ga0307410_10080952 3300031852 Bacteria 2280
103 Ga0307410_10126388 3300031852 Bacteria 1872
104 Ga0307406_10000219 3300031901 Bacteria 34661
105 Ga0307406_10007008 3300031901 Bacteria 6240
106 Ga0307406_10007021 3300031901 Bacteria 6233
107 Ga0307407_10000481 3300031903 Bacteria 12277
108 Ga0307412_10006955 3300031911 Bacteria 6421
109 Ga0307409_100000472 3300031995 Bacteria 17188
110 Ga0307409_100001137 3300031995 Bacteria 12634
111 Ga0307409_100028847 3300031995 Bacteria 3961
112 Ga0307416_100000297 3300032002 Bacteria 25889
113 Ga0307416_100051334 3300032002 Bacteria 3293
114 Ga0307414_10001561 3300032004 Bacteria 11903
115 Ga0307414_10018449 3300032004 Bacteria 4296
116 Ga0307411_10000676 3300032005 Bacteria 12507
117 Ga0307415_100000014 3300032126 Bacteria 81236
118 Ga0307415_100000401 3300032126 Bacteria 18454
119 Ga0307415_100005487 3300032126 Bacteria 6741
120 Ga0373935_0003521 3300035692 Bacteria 9110
121 Ga0373947_0000002 3300035725 Bacteria 383924
122 Ga0451853_3336712 3300041512 Bacteria 3063
123 Ga0439463_007173 3300042016 Bacteria 2752
124 Ga0439440_0005503 3300042993 Bacteria 2518
125 Ga0466965_0028779 3300044683 Bacteria 2700
126 Ga0466957_0033614 3300044842 Bacteria 3077
127 Ga0466960_0016413 3300044901 Bacteria 3212
128 Ga0495651_0095777 3300046462 Bacteria 2219
129 Ga0495653_0027150 3300046463 Bacteria 4583
130 Ga0495644_0017990 3300046523 Bacteria 2700
131 Ga0496100_0036327 3300048903 Bacteria 3107
132 Ga0496102_0047408 3300048905 Bacteria 3904
133 Ga0496108_0104082 3300048911 Bacteria 2422
134 Ga0496109_0037600 3300048912 Bacteria 4373
135 Ga0496111_0097725 3300048914 Bacteria 2155
136 Ga0496112_0010558 3300048915 Bacteria 8387
137 Ga0496112_0029890 3300048915 Bacteria 5271
138 Ga0496114_0079535 3300048917 Bacteria 2767
139 Ga0496114_0100781 3300048917 Bacteria 2465
140 Ga0496126_0000006 3300048929 Bacteria 798804
141 Ga0501031_0001304 3300049568 Bacteria 15291
142 Ga0501032_0002887 3300049569 Bacteria 13361
143 Ga0501032_0013844 3300049569 Bacteria 5723
144 Ga0501033_0002127 3300049570 Bacteria 17129
145 Ga0501033_0005707 3300049570 Bacteria 9814
146 Ga0501034_0004872 3300049571 Bacteria 14809
147 Ga0501034_0005478 3300049571 Bacteria 13855
148 Ga0501034_0221926 3300049571 Bacteria 1842
149 Ga0501036_0002156 3300049572 Bacteria 15369
150 Ga0501036_0003021 3300049572 Bacteria 13394
151 Ga0501036_0039875 3300049572 Bacteria 3973
152 Ga0501036_0055678 3300049572 Bacteria 3351
153 Ga0501036_0103668 3300049572 Bacteria 2406
154 Ga0501037_0000782 3300049573 Bacteria 23992
155 Ga0501038_0003575 3300049574 Bacteria 14462
156 Ga0501038_0015832 3300049574 Bacteria 6851
157 Ga0501038_0016407 3300049574 Bacteria 6712
158 Ga0501039_0001546 3300049575 Bacteria 16916
159 Ga0501040_0054592 3300049576 Bacteria 2739
160 Ga0501042_0008056 3300049578 Bacteria 6935
161 Ga0501042_0019374 3300049578 Bacteria 4724
162 Ga0501042_0032273 3300049578 Bacteria 3708
163 Ga0501043_0004131 3300049579 Bacteria 11860
164 Ga0501043_0010528 3300049579 Bacteria 7241
165 Ga0501043_0025136 3300049579 Bacteria 4672
166 Ga0501046_0000188 3300049580 Bacteria 63345
167 Ga0501046_0001159 3300049580 Bacteria 25641
168 Ga0501046_0027911 3300049580 Bacteria 4601
169 Ga0501046_0042458 3300049580 Bacteria 3626
170 Ga0501047_0005042 3300049581 Bacteria 12392
171 Ga0501047_0076794 3300049581 Bacteria 3214
172 Ga0501047_0080030 3300049581 Bacteria 3141
173 Ga0501048_0002485 3300049582 Bacteria 14081
174 Ga0501048_0117499 3300049582 Bacteria 1879
175 Ga0501067_0006241 3300049583 Bacteria 6611
176 Ga0501067_0007493 3300049583 Bacteria 6062
177 Ga0501069_0003444 3300049585 Bacteria 8135
178 Ga0501069_0018372 3300049585 Bacteria 3773
179 Ga0501070_0001113 3300049586 Bacteria 24139
180 Ga0501071_0014753 3300049587 Bacteria 5348
181 Ga0501071_0015443 3300049587 Bacteria 5242
182 Ga0501072_0024061 3300049588 Bacteria 4735
183 Ga0501072_0084886 3300049588 Bacteria 2511
184 Ga0501073_0012217 3300049589 Bacteria 6269
185 Ga0501074_0001996 3300049590 Bacteria 14048
186 Ga0501076_0011188 3300049592 Bacteria 6678
187 Ga0501080_0002999 3300049742 Bacteria 14880
188 Ga0501080_0112161 3300049742 Bacteria 2527
189 Ga0501083_0004288 3300049744 Bacteria 10042
190 Ga0501035_0004339 3300049822 Bacteria 13458
191 Ga0501044_0003297 3300049823 Bacteria 18183
192 Ga0501044_0012013 3300049823 Bacteria 9381
193 Ga0501044_0068542 3300049823 Bacteria 3613
194 Ga0501044_0081973 3300049823 Bacteria 3265
195 Ga0501045_0008203 3300049824 Bacteria 7276
196 Ga0501045_0100554 3300049824 Bacteria 2140
197 nmdc:mga00v17_102045_c1 3300050491 Bacteria 1812
198 nmdc:mga0yw44_31599_c1 3300050492 Bacteria 3080
199 nmdc:mga05p37_11825_c1 3300050507 Bacteria 10403
200 nmdc:mga05p37_13488_c1 3300050507 Bacteria 9793
201 nmdc:mga09592_33071_c1 3300050508 Bacteria 4314
202 nmdc:mga09592_37853_c1 3300050508 Bacteria 4048
203 nmdc:mga0qj67_127528_c1 3300050509 Bacteria 2059
204 nmdc:mga0qj67_26398_c1 3300050509 Bacteria 4497
205 nmdc:mga06r32_11219_c1 3300050510 Bacteria 8072
206 nmdc:mga06r32_67160_c1 3300050510 Bacteria 3461
207 nmdc:mga08y16_39694_c1 3300050511 Bacteria 4938
208 nmdc:mga08y16_60531_c1 3300050511 Bacteria 3955
209 nmdc:mga0n895_2309_c1 3300050512 Bacteria 14839
210 nmdc:mga0n895_7864_c1 3300050512 Bacteria 9193
211 nmdc:mga0rr50_12315_c1 3300050513 Bacteria 5522
212 nmdc:mga0rr50_2411_c1 3300050513 Bacteria 10521
213 nmdc:mga0a205_6131_c1 3300050515 Bacteria 10849
214 Ga0495601_0047441 3300053077 Bacteria 2704
215 Ga0500646_0000645 3300053090 Bacteria 9978
216 Ga0501084_0010598 3300054114 Bacteria 7625
217 Ga0501084_0012692 3300054114 Bacteria 6981
218 Ga0501082_0085189 3300060353 Bacteria 2726
219 Ga0530510_0051075 3300061734 Bacteria 2987

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300025961 Ga0207712_10086492 Ga0207712_100864922 482
2 3300041512 Ga0451853_3336712 Ga0451853_3336712_29_1501 487
3 3300048929 Ga0496126_0000006 Ga0496126_0000006_178386_180071 501
4 3300005937 Ga0081455_10109750 Ga0081455_101097502 515
5 3300044683 Ga0466965_0028779 Ga0466965_0028779_346_2058 525
6 3300005518 Ga0070699_100000014 Ga0070699_100000014160 526
7 3300049571 Ga0501034_0221926 Ga0501034_0221926_129_1784 526
8 3300049572 Ga0501036_0039875 Ga0501036_0039875_894_2582 530
9 3300049574 Ga0501038_0016407 Ga0501038_0016407_515_2203 530
10 3300049578 Ga0501042_0008056 Ga0501042_0008056_3221_4909 530
11 3300049580 Ga0501046_0042458 Ga0501046_0042458_45_1733 530
12 3300049587 Ga0501071_0014753 Ga0501071_0014753_1346_3034 530
13 3300049588 Ga0501072_0024061 Ga0501072_0024061_143_1831 530
14 3300049592 Ga0501076_0011188 Ga0501076_0011188_4548_6236 530
15 3300049742 Ga0501080_0112161 Ga0501080_0112161_278_1966 530
16 3300049824 Ga0501045_0008203 Ga0501045_0008203_1791_3479 530
17 3300054114 Ga0501084_0012692 Ga0501084_0012692_2360_4048 530
18 3300060353 Ga0501082_0085189 Ga0501082_0085189_313_2001 530
19 3300049571 Ga0501034_0005478 Ga0501034_0005478_1659_3266 531
20 3300049582 Ga0501048_0117499 Ga0501048_0117499_103_1713 531
21 3300049823 Ga0501044_0012013 Ga0501044_0012013_7381_8988 531
22 3300005329 Ga0070683_100028216 Ga0070683_1000282165 533
23 3300053077 Ga0495601_0047441 Ga0495601_0047441_1055_2665 533
24 3300025906 Ga0207699_10012489 Ga0207699_100124894 534
25 3300046463 Ga0495653_0027150 Ga0495653_0027150_76_1767 534
26 3300049581 Ga0501047_0076794 Ga0501047_0076794_1501_3120 534
27 3300050509 nmdc:mga0qj67_127528_c1 nmdc:mga0qj67_127528_c1_396_2021 537
28 3300005347 Ga0070668_100000673 Ga0070668_10000067310 540
29 3300025972 Ga0207668_10001731 Ga0207668_100017313 540
30 3300031730 Ga0307516_10000954 Ga0307516_1000095424 540
31 3300049574 Ga0501038_0015832 Ga0501038_0015832_1726_3381 541
32 3300049583 Ga0501067_0007493 Ga0501067_0007493_1464_3152 541
33 3300049585 Ga0501069_0018372 Ga0501069_0018372_1384_3072 541
34 iso_pu_bacteria 2643221615 2644093215 542
35 iso_pu_bacteria 2643221657 2644322826 542
36 3300050491 nmdc:mga00v17_102045_c1 nmdc:mga00v17_102045_c1_91_1794 543
37 3300061734 Ga0530510_0051075 Ga0530510_0051075_303_1982 543
38 iso_pu_bacteria 2816332119 2816423785 544
39 3300005435 Ga0070714_100000592 Ga0070714_1000005927 545
40 3300048917 Ga0496114_0079535 Ga0496114_0079535_457_2178 546
41 3300028381 Ga0268264_10000687 Ga0268264_100006879 548
42 3300049581 Ga0501047_0080030 Ga0501047_0080030_224_1879 548
43 3300050510 nmdc:mga06r32_67160_c1 nmdc:mga06r32_67160_c1_241_1917 548
44 iso_pu_bacteria 2515154155 2515855170 548
45 iso_pu_bacteria 2675903058 2676473515 548
46 iso_pu_bacteria 2827628540 2827632026 548
47 iso_pu_bacteria 8057568493 8057575389 549
48 3300006847 Ga0075431_100037637 Ga0075431_1000376374 550
49 3300035692 Ga0373935_0003521 Ga0373935_0003521_455_2113 550
50 3300035725 Ga0373947_0000002 Ga0373947_0000002_134302_135960 550
51 iso_pu_bacteria 2861520306 2861523396 550
52 iso_pu_bacteria 8054609563 8054614007 550
53 3300006038 Ga0075365_10022240 Ga0075365_100222403 551
54 3300009551 Ga0105238_10091738 Ga0105238_100917382 551
55 3300048905 Ga0496102_0047408 Ga0496102_0047408_1074_2762 551
56 3300048912 Ga0496109_0037600 Ga0496109_0037600_2486_4174 551
57 3300049569 Ga0501032_0013844 Ga0501032_0013844_754_2424 551
58 3300049570 Ga0501033_0005707 Ga0501033_0005707_5482_7152 551
59 3300049572 Ga0501036_0002156 Ga0501036_0002156_11104_12774 551
60 3300049578 Ga0501042_0032273 Ga0501042_0032273_187_1857 551
61 3300049579 Ga0501043_0010528 Ga0501043_0010528_3734_5404 551
62 3300049579 Ga0501043_0025136 Ga0501043_0025136_1209_2879 551
63 3300049580 Ga0501046_0000188 Ga0501046_0000188_36070_37740 551
64 3300049580 Ga0501046_0027911 Ga0501046_0027911_2359_4029 551
65 3300049823 Ga0501044_0068542 Ga0501044_0068542_1615_3285 551
66 3300050492 nmdc:mga0yw44_31599_c1 nmdc:mga0yw44_31599_c1_639_2315 551
67 iso_pu_bacteria 2643221641 2644231562 551
68 iso_pu_bacteria 2773857762 2774394329 551
69 iso_pu_bacteria 2811994878 2812352937 551
70 iso_pu_bacteria 2891968417 2891972712 551
71 3300006880 Ga0075429_100068175 Ga0075429_1000681752 552
72 3300009147 Ga0114129_10004970 Ga0114129_1000497014 552
73 3300031616 Ga0307508_10040871 Ga0307508_100408712 552
74 3300044842 Ga0466957_0033614 Ga0466957_0033614_1066_2736 552
75 3300049572 Ga0501036_0055678 Ga0501036_0055678_1046_2749 552
76 3300050507 nmdc:mga05p37_11825_c1 nmdc:mga05p37_11825_c1_5114_6790 552
77 3300050508 nmdc:mga09592_37853_c1 nmdc:mga09592_37853_c1_257_1933 552
78 3300050509 nmdc:mga0qj67_26398_c1 nmdc:mga0qj67_26398_c1_1525_3201 552
79 iso_pu_bacteria 2739367898 2740167339 552
80 iso_pu_bacteria 2857481737 2857485667 552
81 3300005331 Ga0070670_100087412 Ga0070670_1000874121 553
82 3300005366 Ga0070659_100091267 Ga0070659_1000912671 553
83 3300005577 Ga0068857_100056182 Ga0068857_1000561821 553
84 3300005614 Ga0068856_100131564 Ga0068856_1001315642 553
85 3300006042 Ga0075368_10000787 Ga0075368_100007878 553
86 3300006353 Ga0075370_10012019 Ga0075370_100120193 553
87 3300009094 Ga0111539_10079243 Ga0111539_100792433 553
88 3300009553 Ga0105249_10064316 Ga0105249_100643162 553
89 3300010375 Ga0105239_10049935 Ga0105239_100499353 553
90 3300013307 Ga0157372_10192182 Ga0157372_101921822 553
91 3300025904 Ga0207647_10010750 Ga0207647_100107501 553
92 3300025932 Ga0207690_10077626 Ga0207690_100776261 553
93 3300026116 Ga0207674_10066132 Ga0207674_100661324 553
94 3300048903 Ga0496100_0036327 Ga0496100_0036327_688_2370 553
95 3300050508 nmdc:mga09592_33071_c1 nmdc:mga09592_33071_c1_1281_2942 553
96 3300050511 nmdc:mga08y16_60531_c1 nmdc:mga08y16_60531_c1_1374_3035 553
97 3300050512 nmdc:mga0n895_7864_c1 nmdc:mga0n895_7864_c1_1447_3108 553
98 3300050513 nmdc:mga0rr50_12315_c1 nmdc:mga0rr50_12315_c1_726_2387 553
99 iso_pu_bacteria 2643221561 2643824094 553
100 iso_pu_bacteria 2643221696 2644533400 553
101 iso_pu_bacteria 2808606439 2809194809 553
102 3300005327 Ga0070658_10003401 Ga0070658_100034014 554
103 3300005329 Ga0070683_100001990 Ga0070683_1000019902 554
104 3300005345 Ga0070692_10032032 Ga0070692_100320322 554
105 3300005366 Ga0070659_100026482 Ga0070659_1000264823 554
106 3300005535 Ga0070684_100015881 Ga0070684_1000158813 554
107 3300005535 Ga0070684_100076616 Ga0070684_1000766162 554
108 3300005564 Ga0070664_100040310 Ga0070664_1000403103 554
109 3300005577 Ga0068857_100144303 Ga0068857_1001443032 554
110 3300005577 Ga0068857_100157434 Ga0068857_1001574342 554
111 3300005618 Ga0068864_100023387 Ga0068864_1000233873 554
112 3300005841 Ga0068863_100002396 Ga0068863_10000239612 554
113 3300005983 Ga0081540_1006510 Ga0081540_10065107 554
114 3300005985 Ga0081539_10004935 Ga0081539_1000493511 554
115 3300009147 Ga0114129_10137314 Ga0114129_101373142 554
116 3300013104 Ga0157370_10068061 Ga0157370_100680613 554
117 3300013105 Ga0157369_10035215 Ga0157369_100352153 554
118 3300014325 Ga0163163_10011714 Ga0163163_100117142 554
119 3300020082 Ga0206353_11426036 Ga0206353_114260362 554
120 3300025944 Ga0207661_10004266 Ga0207661_100042662 554
121 3300026088 Ga0207641_10010453 Ga0207641_100104539 554
122 3300026095 Ga0207676_10058763 Ga0207676_100587633 554
123 3300026116 Ga0207674_10071647 Ga0207674_100716472 554
124 3300026116 Ga0207674_10141156 Ga0207674_101411562 554
125 3300028794 Ga0307515_10009874 Ga0307515_100098743 554
126 3300031852 Ga0307410_10080952 Ga0307410_100809521 554
127 3300031995 Ga0307409_100028847 Ga0307409_1000288471 554
128 3300032126 Ga0307415_100005487 Ga0307415_1000054872 554
129 3300048915 Ga0496112_0010558 Ga0496112_0010558_3328_5007 554
130 3300048915 Ga0496112_0029890 Ga0496112_0029890_382_2061 554
131 3300049588 Ga0501072_0084886 Ga0501072_0084886_141_1835 554
132 3300049823 Ga0501044_0081973 Ga0501044_0081973_1065_2744 554
133 3300053090 Ga0500646_0000645 Ga0500646_0000645_5854_7533 554
134 3300009098 Ga0105245_10012554 Ga0105245_100125543 555
135 3300025927 Ga0207687_10044426 Ga0207687_100444262 555
136 3300031731 Ga0307405_10002681 Ga0307405_100026819 555
137 3300031852 Ga0307410_10126388 Ga0307410_101263881 555
138 3300031901 Ga0307406_10007021 Ga0307406_100070212 555
139 3300031911 Ga0307412_10006955 Ga0307412_100069552 555
140 3300031995 Ga0307409_100000472 Ga0307409_10000047220 555
141 3300032126 Ga0307415_100000014 Ga0307415_10000001459 555
142 3300044901 Ga0466960_0016413 Ga0466960_0016413_903_2627 555
143 3300046462 Ga0495651_0095777 Ga0495651_0095777_337_2013 555
144 3300048911 Ga0496108_0104082 Ga0496108_0104082_184_1869 555
145 3300048914 Ga0496111_0097725 Ga0496111_0097725_13_1698 555
146 3300048917 Ga0496114_0100781 Ga0496114_0100781_597_2282 555
147 3300049568 Ga0501031_0001304 Ga0501031_0001304_4192_5871 555
148 3300049569 Ga0501032_0002887 Ga0501032_0002887_10270_11949 555
149 3300049570 Ga0501033_0002127 Ga0501033_0002127_14077_15756 555
150 3300049571 Ga0501034_0004872 Ga0501034_0004872_10142_11821 555
151 3300049572 Ga0501036_0003021 Ga0501036_0003021_11161_12840 555
152 3300049572 Ga0501036_0103668 Ga0501036_0103668_18_1724 555
153 3300049573 Ga0501037_0000782 Ga0501037_0000782_1127_2806 555
154 3300049574 Ga0501038_0003575 Ga0501038_0003575_11657_13336 555
155 3300049575 Ga0501039_0001546 Ga0501039_0001546_10918_12597 555
156 3300049576 Ga0501040_0054592 Ga0501040_0054592_950_2629 555
157 3300049578 Ga0501042_0019374 Ga0501042_0019374_2584_4263 555
158 3300049579 Ga0501043_0004131 Ga0501043_0004131_134_1813 555
159 3300049580 Ga0501046_0001159 Ga0501046_0001159_19643_21322 555
160 3300049581 Ga0501047_0005042 Ga0501047_0005042_1127_2806 555
161 3300049582 Ga0501048_0002485 Ga0501048_0002485_1192_2871 555
162 3300049583 Ga0501067_0006241 Ga0501067_0006241_3910_5589 555
163 3300049585 Ga0501069_0003444 Ga0501069_0003444_3468_5147 555
164 3300049586 Ga0501070_0001113 Ga0501070_0001113_19472_21151 555
165 3300049587 Ga0501071_0015443 Ga0501071_0015443_3099_4778 555
166 3300049589 Ga0501073_0012217 Ga0501073_0012217_3185_4864 555
167 3300049590 Ga0501074_0001996 Ga0501074_0001996_2841_4520 555
168 3300049742 Ga0501080_0002999 Ga0501080_0002999_6320_7999 555
169 3300049744 Ga0501083_0004288 Ga0501083_0004288_7991_9670 555
170 3300049822 Ga0501035_0004339 Ga0501035_0004339_8981_10660 555
171 3300049823 Ga0501044_0003297 Ga0501044_0003297_262_1941 555
172 3300049824 Ga0501045_0100554 Ga0501045_0100554_167_1873 555
173 3300054114 Ga0501084_0010598 Ga0501084_0010598_2867_4546 555
174 iso_pu_bacteria 2855386786 2855389593 555
175 iso_pu_bacteria 2883821847 2883823325 555
176 3300005337 Ga0070682_100009415 Ga0070682_1000094152 557
177 3300005347 Ga0070668_100042333 Ga0070668_1000423332 557
178 3300005356 Ga0070674_100021641 Ga0070674_1000216413 557
179 3300005441 Ga0070700_100067812 Ga0070700_1000678122 557
180 3300005455 Ga0070663_100075204 Ga0070663_1000752042 557
181 3300005459 Ga0068867_100011162 Ga0068867_1000111623 557
182 3300005578 Ga0068854_100056761 Ga0068854_1000567612 557
183 3300005937 Ga0081455_10000960 Ga0081455_1000096027 557
184 3300005937 Ga0081455_10016587 Ga0081455_100165875 557
185 3300005981 Ga0081538_10000350 Ga0081538_1000035023 557
186 3300006058 Ga0075432_10000656 Ga0075432_1000065610 557
187 3300006844 Ga0075428_100003868 Ga0075428_1000038687 557
188 3300006844 Ga0075428_100011981 Ga0075428_1000119815 557
189 3300006847 Ga0075431_100005313 Ga0075431_10000531313 557
190 3300006852 Ga0075433_10036532 Ga0075433_100365324 557
191 3300006852 Ga0075433_10037986 Ga0075433_100379862 557
192 3300006871 Ga0075434_100002464 Ga0075434_1000024649 557
193 3300006871 Ga0075434_100009840 Ga0075434_1000098402 557
194 3300006880 Ga0075429_100027856 Ga0075429_1000278564 557
195 3300007076 Ga0075435_100003711 Ga0075435_1000037114 557
196 3300007076 Ga0075435_100016791 Ga0075435_1000167912 557
197 3300009094 Ga0111539_10001067 Ga0111539_1000106710 557
198 3300009098 Ga0105245_10014413 Ga0105245_100144136 557
199 3300009147 Ga0114129_10004878 Ga0114129_100048782 557
200 3300009148 Ga0105243_10038836 Ga0105243_100388362 557
201 3300009176 Ga0105242_10008765 Ga0105242_100087654 557
202 3300013297 Ga0157378_10139451 Ga0157378_101394512 557
203 3300013307 Ga0157372_10172540 Ga0157372_101725402 557
204 3300014326 Ga0157380_10051811 Ga0157380_100518111 557
205 3300025901 Ga0207688_10019181 Ga0207688_100191812 557
206 3300025933 Ga0207706_10021400 Ga0207706_100214003 557
207 3300025934 Ga0207686_10026447 Ga0207686_100264473 557
208 3300025972 Ga0207668_10014028 Ga0207668_100140282 557
209 3300026075 Ga0207708_10102770 Ga0207708_101027702 557
210 3300026118 Ga0207675_100132608 Ga0207675_1001326082 557
211 3300027907 Ga0207428_10005586 Ga0207428_1000558610 557
212 3300027907 Ga0207428_10034106 Ga0207428_100341062 557
213 3300031548 Ga0307408_100004134 Ga0307408_10000413411 557
214 3300031548 Ga0307408_100148117 Ga0307408_1001481171 557
215 3300031731 Ga0307405_10000253 Ga0307405_100002534 557
216 3300031824 Ga0307413_10000542 Ga0307413_1000054213 557
217 3300031852 Ga0307410_10001896 Ga0307410_1000189610 557
218 3300031852 Ga0307410_10010228 Ga0307410_100102285 557
219 3300031901 Ga0307406_10000219 Ga0307406_100002196 557
220 3300031901 Ga0307406_10007008 Ga0307406_100070086 557
221 3300031903 Ga0307407_10000481 Ga0307407_100004815 557
222 3300031995 Ga0307409_100001137 Ga0307409_1000011377 557
223 3300032002 Ga0307416_100000297 Ga0307416_10000029728 557
224 3300032004 Ga0307414_10001561 Ga0307414_100015613 557
225 3300032005 Ga0307411_10000676 Ga0307411_1000067611 557
226 3300032126 Ga0307415_100000401 Ga0307415_10000040113 557
227 3300042016 Ga0439463_007173 Ga0439463_007173_169_1890 557
228 3300042993 Ga0439440_0005503 Ga0439440_0005503_734_2455 557
229 3300046523 Ga0495644_0017990 Ga0495644_0017990_288_2009 557
230 3300050507 nmdc:mga05p37_13488_c1 nmdc:mga05p37_13488_c1_1721_3442 557
231 3300050510 nmdc:mga06r32_11219_c1 nmdc:mga06r32_11219_c1_5039_6760 557
232 3300050511 nmdc:mga08y16_39694_c1 nmdc:mga08y16_39694_c1_1217_2938 557
233 3300050512 nmdc:mga0n895_2309_c1 nmdc:mga0n895_2309_c1_5792_7513 557
234 3300050513 nmdc:mga0rr50_2411_c1 nmdc:mga0rr50_2411_c1_5587_7308 557
235 3300050515 nmdc:mga0a205_6131_c1 nmdc:mga0a205_6131_c1_2299_4020 557
236 3300003203 JGI25406J46586_10005282 JGI25406J46586_100052822 558
237 3300005985 Ga0081539_10000208 Ga0081539_1000020814 558
238 3300032002 Ga0307416_100051334 Ga0307416_1000513342 558
239 3300032004 Ga0307414_10018449 Ga0307414_100184491 558

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05960

DUF885

Bacterial protein of unknown function (DUF885)

59

592

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
3iuk-assembly1.cif.gz_A crystal structure of putative bacterial protein of unknown function (duf885, pf05960.1, ) from arthrobacter aurescens tc1, reveals fold similar to that of m32 carboxypeptidases 0.9152 1 554
3iuk-assembly1.cif.gz_A crystal structure of putative bacterial protein of unknown function (duf885, pf05960.1, ) from arthrobacter aurescens tc1, reveals fold similar to that of m32 carboxypeptidases 0.9104 1 554
3iuk-assembly2.cif.gz_B crystal structure of putative bacterial protein of unknown function (duf885, pf05960.1, ) from arthrobacter aurescens tc1, reveals fold similar to that of m32 carboxypeptidases 0.9089 1 554
3iuk-assembly2.cif.gz_B crystal structure of putative bacterial protein of unknown function (duf885, pf05960.1, ) from arthrobacter aurescens tc1, reveals fold similar to that of m32 carboxypeptidases 0.9058 1 554
3o0y-assembly4.cif.gz_A the crystal structure of the putative lipoprotein from colwellia psychrerythraea 0.8382 6 556
ID Description Score Start End Superfamily
af_Q54Y95_120_681_1.10.1370.30 Mainly Alpha;Orthogonal Bundle;Neurolysin; domain 3; 0.8381 34 553 1.10.1370.30
af_Q54Y95_120_681_1.10.1370.30 Mainly Alpha;Orthogonal Bundle;Neurolysin; domain 3; 0.7848 34 553 1.10.1370.30
af_A0A0R0EQ18_1_252_1.25.10.10 Mainly Alpha;Alpha Horseshoe;Leucine-rich Repeat Variant;Leucine-rich Repeat Variant 0.3261 47 216 1.25.10.10
af_V9GX04_14_137_1.20.140.150 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3; 0.3037 117 214 1.20.140.150
af_Q55CA5_72_237_3.40.390.10 Alpha Beta;3-Layer(aba) Sandwich;Collagenase (Catalytic Domain);Collagenase (Catalytic Domain) 0.3007 281 488 3.40.390.10
ID Description Score Start End GO Terms
AF-A0A543AYP6-F1-model_v4 Uncharacterized protein (DUF885 family) 0.9856 3 557
AF-A0A1C4WMT1-F1-model_v4 Uncharacterized conserved protein, DUF885 familyt 0.9849 3 557
AF-A0A248YTP6-F1-model_v4 DUF885 domain-containing protein 0.9841 3 557
AF-A0A317DDP0-F1-model_v4 DUF885 domain-containing protein 0.9837 3 557
AF-A0A7W0HA62-F1-model_v4 DUF885 domain-containing protein 0.9827 3 557

Feature Viewer

pLDDT pTM Quality
94.81 0.92 High
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Predicted Structure (AlphaFold2)

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