F352129

General Info

Members Datasets Scaffolds Average Seq Length
239 196 478 916

Family's Representative Sequence

Representative Sequence 3300037471|Ga0395905_0000022|Ga0395905_0000022_262881_265823
Length 975
Sequence MTYFGSRSRGRSFLRFLMLAIAKMLFGSSNDRKVKSMMGRVQRINALEPRFKAMSDDELRHQTELFKERLAKGNSLDSLMDEAFGVVREAAWRAIGQRHYDVQLVGGMILHKGGIAEMRTGEGKTLVGTAPVYLNALEGKGVHLITVNDYLAKRDAEWMGRVYRFLGMSTGVIVQGLSQSQRKQAYNSDVTYGTNNEFGFDYLRDNLAYSRNEMVQRGHNFCIVDEVDSILIDEARTPLIISGPTEDRSELYKILDATIREMIQDPETFELDEKQRQVLLSETGSERLEEMLTQAGHISEDTAGLYDPANISLVHHANQALRANTLYQLNRDYIVKDGEIILIDEFTGRMMTGRRLSEGLHQAIEAKERVEIQPENQTLASVTIQNYFRMYTKLSGMTGTAATEAQEFGDIYKMDVLEIPTNRPIQRIDDNDEVYRTEQEKFVAIAAQVAHCYVKGQPVLVGTASIEKSEQLSEFLNSYAYSVEQSRTLKPEYANAAKSEIVKLGEAAYDIVSKSGKGIPHNVLNARFHEQEAEIVADAGVPGAVTIATNMAGRGTDIQLGGNVDMRVQKWLAEQDAAGVEVTQEALFAKRGEIEAQVAELKERSLAAGGLFVLGTERHESRRIDNQLRGRTGRQGDPGRSKFFLSCEDDLMRIFAGDRLNTMMKSLGVAEGEAITHPLLNGAIATAQKRVEQRNYEIRKNLLKYDDVVNDQRKAVFEQRQDFMDSEDLSELIHEFRQDTIHDLVERHLPPKAYAEQWDIQGLKEQVLVLTGLDLPIEVWAAEEGIANEEIEERLQQAAGQKMTERLDLLGEEQMKALEKQFLLQMIDMHWREHLMHLDHLRAVIGLRGYGQRDPLNEYKTEAFTLFEQLLVNLRHSVTRWLMTMEIRFQPPEPEALPQMTQMMQAAPRQFQEVHLDPITGHNERAAKLSDDLSSEERENLPHTALPGGWENTPRNGLCPCGSGKKFKHCHGVLV

Samples

Sample ID Description Type Environment
1 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
2 3300001977 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5 Metagenome Rhizosphere
3 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
4 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
5 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
6 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
9 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
10 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
11 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
12 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
13 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
14 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
15 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
16 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
17 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
18 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
19 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
20 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
21 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
22 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
23 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
24 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
25 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
26 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
27 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
28 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
29 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
30 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
31 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
32 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
33 3300015684 Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.2_F02 Metagenome Unclassified
34 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
35 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
36 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
37 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
38 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
39 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
40 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
41 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
42 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
59 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
60 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
61 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
62 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
63 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
64 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
65 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
66 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
67 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
68 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
69 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
70 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
71 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
72 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
73 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
74 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
75 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
76 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
77 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
78 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
79 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
80 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
81 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
82 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
83 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
84 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
85 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
86 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
87 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
88 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
89 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
90 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
91 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
92 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
93 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
94 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
95 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
96 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
97 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
98 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
99 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
100 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
101 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
102 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
103 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
104 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
105 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
106 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
107 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
108 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
109 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
110 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
111 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
112 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
113 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
114 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
115 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
116 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
117 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
118 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
119 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
120 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
121 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
122 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
124 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
127 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
129 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
133 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
134 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
135 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
136 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
137 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
138 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
139 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
140 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
141 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
142 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
143 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
145 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
146 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
147 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
148 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
149 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
150 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
151 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
152 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
153 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
154 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
155 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
156 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
157 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
158 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
159 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
160 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
161 2510917020 Caulobacter sp. AP07 Isolate Rhizosphere
162 2523231067 Pleomorphomonas oryzae DSM 16300 Isolate Unclassified
163 2534681786 Brucella suis 92/29 Isolate Unclassified
164 2582581279 Caulobacter henricii OK261 Isolate Rhizosphere
165 2582581280 Caulobacter henricii CF287 Isolate Rhizosphere
166 2582581293 Caulobacter henricii YR570 Isolate Rhizosphere
167 2585428106 Caulobacter sp. OV484 Isolate Rhizosphere
168 2643221545 Caulobacter sp. Root1455 Isolate Unclassified
169 2643221552 Caulobacter sp. Root1472 Isolate Unclassified
170 2643221574 Brevundimonas sp. Root608 Isolate Unclassified
171 2643221583 Caulobacter sp. Root655 Isolate Unclassified
172 2643221584 Caulobacter sp. Root656 Isolate Unclassified
173 2643221640 Caulobacter sp. Root342 Isolate Unclassified
174 2643221642 Caulobacter sp. Root343 Isolate Unclassified
175 2643221663 Brevundimonas sp. Root1279 Isolate Unclassified
176 2643221691 Caulobacter sp. Root487D2Y Isolate Unclassified
177 2738543031 Pleomorphomonas sp. CF100 Isolate Unclassified
178 2739367756 Asticcacaulis sp. CF398 Isolate Unclassified
179 2758568016 [Ochrobactrum] quorumnocens A44 Isolate Rhizosphere
180 2791355048 Caulobacter flavus CGMCC1 15093 Isolate Rhizosphere
181 2818991435 Caulobacter henricii 536 Isolate Unclassified
182 2818991454 Caulobacter rhizosphaerae 3260 Isolate Rhizosphere
183 2843744320 Caulobacter flavus RHGG3 Isolate Unclassified
184 2849560528 Caulobacter zeae 410 Isolate Unclassified
185 2849573788 Caulobacter endophyticus 774 Isolate Unclassified
186 2851153111 Caulobacter radicis 736 Isolate Unclassified
187 2854911287 Brucella lupini LUP21 Isolate Unclassified
188 2857504554 Caulobacter sp. R-72291 Isolate Unclassified
189 2884960567 Caulobacter sp. 602-1 Isolate Rhizosphere
190 2898329390 Caulobacter sp. 602-2 Isolate Rhizosphere
191 2909042592 Labrys sp. LIt4 Isolate Nodule
192 2915650412 Ochrobactrum sp. CM-21-5 Isolate Rhizosphere
193 2928531327 Caulobacter sp. 1776 Isolate Rhizosphere
194 2928972540 Brevundimonas sp. 1080 Isolate Rhizosphere
195 2941485952 Brevundimonas faecalis 2814 Isolate Rhizosphere
196 2977240413 Brevundimonas vesicularis SORGH_AS 431 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 84.94
Metatranscriptomes 0
Isolates 15.06

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.13
Nodule 0.42
Rhizoplane 4.18
Rhizosphere 68.62
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0395905_0000022 3300037471 Bacteria 321527
2 JGI24746J21847_1000600 3300001977 Bacteria 5463
3 Ga0055537_1001712 3300003773 Bacteria 8105
4 Ga0055536_1001585 3300003781 Bacteria 13615
5 Ga0055528_1001988 3300003790 Bacteria 11508
6 Ga0055531_10005550 3300003794 Bacteria 7360
7 Ga0070680_100003092 3300005336 Bacteria 12356
8 Ga0070691_10000428 3300005341 Bacteria 15488
9 Ga0070709_10022941 3300005434 Bacteria 3658
10 Ga0070713_100000830 3300005436 Bacteria 19766
11 Ga0070710_10005691 3300005437 Bacteria 5933
12 Ga0070681_10000001 3300005458 Bacteria 946857
13 Ga0070679_100002513 3300005530 Bacteria 16622
14 Ga0068853_100012094 3300005539 Bacteria 7021
15 Ga0070665_100018021 3300005548 Bacteria 7088
16 Ga0068855_100019478 3300005563 Bacteria 8154
17 Ga0068857_100000031 3300005577 Bacteria 75513
18 Ga0068856_100001105 3300005614 Bacteria 28524
19 Ga0075368_10014142 3300006042 Bacteria 2943
20 Ga0075369_10002144 3300006186 Bacteria 6967
21 Ga0068865_100000885 3300006881 Bacteria 16967
22 Ga0114129_10001060 3300009147 Bacteria 36097
23 Ga0105241_10027174 3300009174 Bacteria 4261
24 Ga0105237_10001309 3300009545 Bacteria 33107
25 Ga0105239_10002559 3300010375 Bacteria 23073
26 Ga0157373_10001315 3300013100 Bacteria 19009
27 Ga0157371_10018115 3300013102 Bacteria 5214
28 Ga0157370_10012270 3300013104 Bacteria 8895
29 Ga0157369_10003088 3300013105 Bacteria 19904
30 Ga0157369_10010741 3300013105 Bacteria 10423
31 Ga0157372_10004048 3300013307 Bacteria 15708
32 Ga0157375_10002784 3300013308 Bacteria 15121
33 Ga0157379_10011138 3300014968 Bacteria 7839
34 Ga0183365_10001 3300015684 Bacteria 2090444
35 Ga0213876_10000341 3300021384 Bacteria 40559
36 Ga0209565_1000242 3300025263 Bacteria 58681
37 Ga0209673_1000976 3300025273 Bacteria 35297
38 Ga0209675_1007704 3300025291 Bacteria 4079
39 Ga0209676_1000115 3300025292 Bacteria 205183
40 Ga0209676_1000289 3300025292 Bacteria 103078
41 Ga0209676_1000840 3300025292 Bacteria 39709
42 Ga0209050_1002120 3300025298 Bacteria 18075
43 Ga0209051_1002760 3300025303 Bacteria 12127
44 Ga0209257_1000036 3300025304 Bacteria 616006
45 Ga0209257_1000090 3300025304 Bacteria 274746
46 Ga0209257_1003164 3300025304 Bacteria 14646
47 Ga0207654_10006578 3300025911 Bacteria 5843
48 Ga0207707_10000011 3300025912 Bacteria 282857
49 Ga0207695_10006975 3300025913 Bacteria 14503
50 Ga0207671_10021408 3300025914 Bacteria 4906
51 Ga0207660_10000737 3300025917 Bacteria 21749
52 Ga0207652_10000089 3300025921 Bacteria 99680
53 Ga0207700_10006285 3300025928 Bacteria 7169
54 Ga0207704_10004907 3300025938 Bacteria 6144
55 Ga0207667_10012058 3300025949 Bacteria 9997
56 Ga0207667_10023842 3300025949 Bacteria 6735
57 Ga0207639_10008796 3300026041 Bacteria 6938
58 Ga0207702_10000875 3300026078 Bacteria 31344
59 Ga0207674_10000003 3300026116 Bacteria 241674
60 Ga0207698_10012208 3300026142 Bacteria 5611
61 Ga0268266_10013221 3300028379 Bacteria 7115
62 Ga0268265_10009696 3300028380 Bacteria 6500
63 Ga0268264_10028542 3300028381 Bacteria 4564
64 Ga0265337_1000830 3300028556 Bacteria 16238
65 Ga0265338_10012908 3300028800 Bacteria 9490
66 Ga0265332_10001618 3300031238 Bacteria 12333
67 Ga0265325_10000097 3300031241 Bacteria 61606
68 Ga0265340_10005865 3300031247 Bacteria 6794
69 Ga0265339_10001849 3300031249 Bacteria 15548
70 Ga0307513_10001175 3300031456 Bacteria 37977
71 Ga0265313_10014914 3300031595 Bacteria 4560
72 Ga0265314_10001493 3300031711 Bacteria 25971
73 Ga0265342_10000139 3300031712 Bacteria 81785
74 Ga0307406_10014976 3300031901 Bacteria 4476
75 Ga0307412_10025423 3300031911 Bacteria 3668
76 Ga0373941_0000137 3300035115 Bacteria 12917
77 Ga0373955_0000856 3300035172 Bacteria 13023
78 Ga0373933_0000965 3300035724 Bacteria 17529
79 Ga0373937_0011052 3300036401 Bacteria 7913
80 Ga0373937_0021936 3300036401 Bacteria 5734
81 Ga0373925_0028193 3300037068 Bacteria 4113
82 Ga0373925_0057270 3300037068 Bacteria 2920
83 Ga0395899_0000003 3300037312 Bacteria 1232684
84 Ga0395899_0000847 3300037312 Bacteria 29441
85 Ga0395900_0000016 3300037418 Bacteria 382407
86 Ga0395898_0001824 3300037466 Bacteria 27470
87 Ga0395905_0003985 3300037471 Bacteria 15525
88 Ga0436364_0811097 3300037853 Bacteria 4304
89 Ga0395901_0000028 3300038443 Bacteria 242653
90 Ga0400483_291609 3300039062 Bacteria 6666
91 Ga0436365_1702191 3300039437 Bacteria 116634
92 Ga0436361_0242079 3300039447 Bacteria 15971
93 Ga0466969_0002300 3300044656 Bacteria 10198
94 Ga0466966_0000560 3300044684 Bacteria 23677
95 Ga0466971_0012396 3300044719 Bacteria 3735
96 Ga0466957_0004008 3300044842 Bacteria 8144
97 Ga0466959_0000040 3300045049 Bacteria 101109
98 Ga0466958_0000417 3300045836 Bacteria 17527
99 Ga0495627_000397 3300046453 Bacteria 39323
100 Ga0495592_0009989 3300046454 Bacteria 7146
101 Ga0495590_0003454 3300046457 Bacteria 6447
102 Ga0495638_0001545 3300046460 Bacteria 20702
103 Ga0495651_0018263 3300046462 Bacteria 5431
104 Ga0495650_0000068 3300046471 Bacteria 266671
105 Ga0495583_0000002 3300046506 Bacteria 782521
106 Ga0495606_0007111 3300046507 Bacteria 10117
107 Ga0495610_0003956 3300046512 Bacteria 11212
108 Ga0495616_0000756 3300046513 Bacteria 23652
109 Ga0495631_0008021 3300046518 Bacteria 5336
110 Ga0495648_0000067 3300046524 Bacteria 140250
111 Ga0495645_0022296 3300046543 Bacteria 4580
112 Ga0495668_0000026 3300046616 Bacteria 297287
113 Ga0495668_0002997 3300046616 Bacteria 13188
114 Ga0495625_0000127 3300046660 Bacteria 118526
115 Ga0495669_0000005 3300046684 Bacteria 193971
116 Ga0495669_0000356 3300046684 Bacteria 23366
117 Ga0495649_0000077 3300046694 Bacteria 84222
118 Ga0495672_0000808 3300047320 Bacteria 33700
119 Ga0495672_0002737 3300047320 Bacteria 15802
120 Ga0495680_0009055 3300047322 Bacteria 8989
121 Ga0496100_0005125 3300048903 Bacteria 7024
122 Ga0496101_0001893 3300048904 Bacteria 12638
123 Ga0496104_0000311 3300048907 Bacteria 43387
124 Ga0496104_0001419 3300048907 Bacteria 20752
125 Ga0496105_0000144 3300048908 Bacteria 46774
126 Ga0496107_0007541 3300048910 Bacteria 7505
127 Ga0496107_0033653 3300048910 Bacteria 3668
128 Ga0496108_0016792 3300048911 Bacteria 5980
129 Ga0496114_0009187 3300048917 Bacteria 7838
130 Ga0496115_0000546 3300048918 Bacteria 29331
131 Ga0496119_0008059 3300048922 Bacteria 9352
132 Ga0496122_0001424 3300048925 Bacteria 38740
133 Ga0496122_0003716 3300048925 Bacteria 19725
134 Ga0496123_0001147 3300048926 Bacteria 39513
135 Ga0496123_0001452 3300048926 Bacteria 32997
136 Ga0496125_0001230 3300048928 Bacteria 38324
137 Ga0496125_0005432 3300048928 Bacteria 14173
138 Ga0496126_0001854 3300048929 Bacteria 30807
139 Ga0495678_003822 3300049459 Bacteria 9066
140 Ga0501031_0000016 3300049568 Bacteria 110858
141 Ga0501032_0000011 3300049569 Bacteria 198158
142 Ga0501032_0000044 3300049569 Bacteria 110899
143 Ga0501033_0000052 3300049570 Bacteria 110545
144 Ga0501033_0000225 3300049570 Bacteria 54311
145 Ga0501034_0000001 3300049571 Bacteria 2184493
146 Ga0501034_0000212 3300049571 Bacteria 110795
147 Ga0501034_0004855 3300049571 Bacteria 14836
148 Ga0501036_0000022 3300049572 Bacteria 111251
149 Ga0501037_0000049 3300049573 Bacteria 113246
150 Ga0501037_0000052 3300049573 Bacteria 110932
151 Ga0501038_0000044 3300049574 Bacteria 110876
152 Ga0501038_0033716 3300049574 Bacteria 4507
153 Ga0501039_0000034 3300049575 Bacteria 126569
154 Ga0501039_0000042 3300049575 Bacteria 113008
155 Ga0501043_0000006 3300049579 Bacteria 234413
156 Ga0501043_0000054 3300049579 Bacteria 105924
157 Ga0501043_0017279 3300049579 Bacteria 5660
158 Ga0501047_0000838 3300049581 Bacteria 31753
159 Ga0501047_0001075 3300049581 Bacteria 27218
160 Ga0501047_0013059 3300049581 Bacteria 7867
161 Ga0501047_0051057 3300049581 Bacteria 3994
162 Ga0501069_0000048 3300049585 Bacteria 71487
163 Ga0501070_0002195 3300049586 Bacteria 17158
164 Ga0501070_0003223 3300049586 Bacteria 14190
165 Ga0501071_0010313 3300049587 Bacteria 6257
166 Ga0501072_0064879 3300049588 Bacteria 2879
167 Ga0501073_0005922 3300049589 Bacteria 9126
168 Ga0501074_0000059 3300049590 Bacteria 54551
169 Ga0501076_0004022 3300049592 Bacteria 10391
170 Ga0501077_0001770 3300049593 Bacteria 13042
171 Ga0501080_0000662 3300049742 Bacteria 27361
172 Ga0501081_0007060 3300049743 Bacteria 7302
173 Ga0501083_0000122 3300049744 Bacteria 52893
174 Ga0501083_0017828 3300049744 Bacteria 4952
175 Ga0501035_0000095 3300049822 Bacteria 110735
176 Ga0501035_0000233 3300049822 Bacteria 66205
177 Ga0501035_0000371 3300049822 Bacteria 51668
178 Ga0501035_0008400 3300049822 Bacteria 9615
179 Ga0501044_0000082 3300049823 Bacteria 115127
180 Ga0501044_0000091 3300049823 Bacteria 111251
181 Ga0501044_0004081 3300049823 Bacteria 16377
182 Ga0501044_0011973 3300049823 Bacteria 9400
183 Ga0501044_0070122 3300049823 Bacteria 3566
184 nmdc:mga05p37_2001_c1 3300050507 Bacteria 23793
185 Ga0495601_0000279 3300053077 Bacteria 27517
186 Ga0495619_0000175 3300053085 Bacteria 47129
187 Ga0495619_0003491 3300053085 Bacteria 10143
188 Ga0500643_005790 3300053087 Bacteria 5272
189 Ga0500644_0000036 3300053088 Bacteria 80681
190 Ga0500651_0010855 3300053093 Bacteria 5475
191 Ga0500554_001838 3300053102 Bacteria 4099
192 Ga0500594_0000216 3300053118 Bacteria 14167
193 Ga0500595_012880 3300053119 Bacteria 3217
194 Ga0500608_000373 3300053122 Bacteria 17412
195 Ga0500608_009744 3300053122 Bacteria 4093
196 Ga0500618_000074 3300053125 Bacteria 81608
197 Ga0500652_000056 3300053131 Bacteria 51871
198 Ga0500559_0000856 3300053136 Bacteria 19636
199 Ga0500564_000048 3300053138 Bacteria 31432
200 Ga0501084_0005188 3300054114 Bacteria 10657
201 Ga0501084_0006757 3300054114 Bacteria 9429
202 Ga0501082_0001935 3300060353 Bacteria 18229
203 Ga0501082_0010575 3300060353 Bacteria 7942
204 2511123024 2510917020 Bacteria 5657507
205 2523467572 2523231067 Bacteria 5230452
206 2535485397 2534681786 Bacteria 3308809
207 2585146500 2582581279 Bacteria 4980720
208 2585151911 2582581280 Bacteria 5994497
209 2585194604 2582581293 Bacteria 5907401
210 2587918431 2585428106 Bacteria 5179711
211 2643748546 2643221545 Bacteria 5083237
212 2643779534 2643221552 Bacteria 5708754
213 2643884485 2643221574 Bacteria 2789653
214 2643923550 2643221583 Bacteria 5218014
215 2643931098 2643221584 Bacteria 5511711
216 2644225008 2643221640 Bacteria 5258820
217 2644234058 2643221642 Bacteria 5357871
218 2644351569 2643221663 Bacteria 3425771
219 2644510220 2643221691 Bacteria 5093099
220 2739351884 2738543031 Bacteria 5769731
221 2739793548 2739367756 Bacteria 4553612
222 2758642779 2758568016 Bacteria 5645291
223 2792462854 2791355048 Bacteria 5832535
224 2819537411 2818991435 Bacteria 5433759
225 2819646527 2818991454 Bacteria 5563326
226 2843746401 2843744320 Bacteria 5659202
227 2849561884 2849560528 Bacteria 5393480
228 2849574054 2849573788 Bacteria 5421256
229 2851157732 2851153111 Bacteria 5542585
230 2854913555 2854911287 Bacteria 5582813
231 2857505371 2857504554 Bacteria 5369913
232 2884962365 2884960567 Bacteria 5437054
233 2898332621 2898329390 Bacteria 5168154
234 2909047544 2909042592 Bacteria 6499737
235 2915650433 2915650412 Bacteria 4288180
236 2928533171 2928531327 Bacteria 5101314
237 2928974571 2928972540 Bacteria 3058286
238 2941486020 2941485952 Bacteria 3591484
239 2977243494 2977240413 Bacteria 3191065
240 Ga0395905_0000022
241 JGI24746J21847_1000600
242 Ga0055537_1001712
243 Ga0055536_1001585
244 Ga0055528_1001988
245 Ga0055531_10005550
246 Ga0070680_100003092
247 Ga0070691_10000428
248 Ga0070709_10022941
249 Ga0070713_100000830
250 Ga0070710_10005691
251 Ga0070681_10000001
252 Ga0070679_100002513
253 Ga0068853_100012094
254 Ga0070665_100018021
255 Ga0068855_100019478
256 Ga0068857_100000031
257 Ga0068856_100001105
258 Ga0075368_10014142
259 Ga0075369_10002144
260 Ga0068865_100000885
261 Ga0114129_10001060
262 Ga0105241_10027174
263 Ga0105237_10001309
264 Ga0105239_10002559
265 Ga0157373_10001315
266 Ga0157371_10018115
267 Ga0157370_10012270
268 Ga0157369_10003088
269 Ga0157369_10010741
270 Ga0157372_10004048
271 Ga0157375_10002784
272 Ga0157379_10011138
273 Ga0183365_10001
274 Ga0213876_10000341
275 Ga0209565_1000242
276 Ga0209673_1000976
277 Ga0209675_1007704
278 Ga0209676_1000115
279 Ga0209676_1000289
280 Ga0209676_1000840
281 Ga0209050_1002120
282 Ga0209051_1002760
283 Ga0209257_1000036
284 Ga0209257_1000090
285 Ga0209257_1003164
286 Ga0207654_10006578
287 Ga0207707_10000011
288 Ga0207695_10006975
289 Ga0207671_10021408
290 Ga0207660_10000737
291 Ga0207652_10000089
292 Ga0207700_10006285
293 Ga0207704_10004907
294 Ga0207667_10012058
295 Ga0207667_10023842
296 Ga0207639_10008796
297 Ga0207702_10000875
298 Ga0207674_10000003
299 Ga0207698_10012208
300 Ga0268266_10013221
301 Ga0268265_10009696
302 Ga0268264_10028542
303 Ga0265337_1000830
304 Ga0265338_10012908
305 Ga0265332_10001618
306 Ga0265325_10000097
307 Ga0265340_10005865
308 Ga0265339_10001849
309 Ga0307513_10001175
310 Ga0265313_10014914
311 Ga0265314_10001493
312 Ga0265342_10000139
313 Ga0307406_10014976
314 Ga0307412_10025423
315 Ga0373941_0000137
316 Ga0373955_0000856
317 Ga0373933_0000965
318 Ga0373937_0011052
319 Ga0373937_0021936
320 Ga0373925_0028193
321 Ga0373925_0057270
322 Ga0395899_0000003
323 Ga0395899_0000847
324 Ga0395900_0000016
325 Ga0395898_0001824
326 Ga0395905_0003985
327 Ga0436364_0811097
328 Ga0395901_0000028
329 Ga0400483_291609
330 Ga0436365_1702191
331 Ga0436361_0242079
332 Ga0466969_0002300
333 Ga0466966_0000560
334 Ga0466971_0012396
335 Ga0466957_0004008
336 Ga0466959_0000040
337 Ga0466958_0000417
338 Ga0495627_000397
339 Ga0495592_0009989
340 Ga0495590_0003454
341 Ga0495638_0001545
342 Ga0495651_0018263
343 Ga0495650_0000068
344 Ga0495583_0000002
345 Ga0495606_0007111
346 Ga0495610_0003956
347 Ga0495616_0000756
348 Ga0495631_0008021
349 Ga0495648_0000067
350 Ga0495645_0022296
351 Ga0495668_0000026
352 Ga0495668_0002997
353 Ga0495625_0000127
354 Ga0495669_0000005
355 Ga0495669_0000356
356 Ga0495649_0000077
357 Ga0495672_0000808
358 Ga0495672_0002737
359 Ga0495680_0009055
360 Ga0496100_0005125
361 Ga0496101_0001893
362 Ga0496104_0000311
363 Ga0496104_0001419
364 Ga0496105_0000144
365 Ga0496107_0007541
366 Ga0496107_0033653
367 Ga0496108_0016792
368 Ga0496114_0009187
369 Ga0496115_0000546
370 Ga0496119_0008059
371 Ga0496122_0001424
372 Ga0496122_0003716
373 Ga0496123_0001147
374 Ga0496123_0001452
375 Ga0496125_0001230
376 Ga0496125_0005432
377 Ga0496126_0001854
378 Ga0495678_003822
379 Ga0501031_0000016
380 Ga0501032_0000011
381 Ga0501032_0000044
382 Ga0501033_0000052
383 Ga0501033_0000225
384 Ga0501034_0000001
385 Ga0501034_0000212
386 Ga0501034_0004855
387 Ga0501036_0000022
388 Ga0501037_0000049
389 Ga0501037_0000052
390 Ga0501038_0000044
391 Ga0501038_0033716
392 Ga0501039_0000034
393 Ga0501039_0000042
394 Ga0501043_0000006
395 Ga0501043_0000054
396 Ga0501043_0017279
397 Ga0501047_0000838
398 Ga0501047_0001075
399 Ga0501047_0013059
400 Ga0501047_0051057
401 Ga0501069_0000048
402 Ga0501070_0002195
403 Ga0501070_0003223
404 Ga0501071_0010313
405 Ga0501072_0064879
406 Ga0501073_0005922
407 Ga0501074_0000059
408 Ga0501076_0004022
409 Ga0501077_0001770
410 Ga0501080_0000662
411 Ga0501081_0007060
412 Ga0501083_0000122
413 Ga0501083_0017828
414 Ga0501035_0000095
415 Ga0501035_0000233
416 Ga0501035_0000371
417 Ga0501035_0008400
418 Ga0501044_0000082
419 Ga0501044_0000091
420 Ga0501044_0004081
421 Ga0501044_0011973
422 Ga0501044_0070122
423 nmdc:mga05p37_2001_c1
424 Ga0495601_0000279
425 Ga0495619_0000175
426 Ga0495619_0003491
427 Ga0500643_005790
428 Ga0500644_0000036
429 Ga0500651_0010855
430 Ga0500554_001838
431 Ga0500594_0000216
432 Ga0500595_012880
433 Ga0500608_000373
434 Ga0500608_009744
435 Ga0500618_000074
436 Ga0500652_000056
437 Ga0500559_0000856
438 Ga0500564_000048
439 Ga0501084_0005188
440 Ga0501084_0006757
441 Ga0501082_0001935
442 Ga0501082_0010575
443 2511123024
444 2523467572
445 2535485397
446 2585146500
447 2585151911
448 2585194604
449 2587918431
450 2643748546
451 2643779534
452 2643884485
453 2643923550
454 2643931098
455 2644225008
456 2644234058
457 2644351569
458 2644510220
459 2739351884
460 2739793548
461 2758642779
462 2792462854
463 2819537411
464 2819646527
465 2843746401
466 2849561884
467 2849574054
468 2851157732
469 2854913555
470 2857505371
471 2884962365
472 2898332621
473 2909047544
474 2915650433
475 2928533171
476 2928974571
477 2941486020
478 2977243494

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07516

SecA_SW

SecA Wing and Scaffold domain

674

886

0.98

PF07517

SecA_DEAD

SecA DEAD-like domain

22

409

0.98

PF21090

P-loop_SecA

SecA P-loop domain

424

672

0.97

PF02810

SEC-C

SEC-C motif

955

972

0.94

PF01043

SecA_PP_bind

SecA preprotein cross-linking domain

247

365

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
3bxz-assembly1.cif.gz_A crystal structure of the isolated dead motor domains from escherichia coli seca 0.9328 11 612
3bxz-assembly1.cif.gz_A crystal structure of the isolated dead motor domains from escherichia coli seca 0.9266 11 612
3jv2-assembly1.cif.gz_A crystal structure of b. subtilis seca with bound peptide 0.8959 21 849
3jv2-assembly2.cif.gz_B crystal structure of b. subtilis seca with bound peptide 0.8937 21 849
3jv2-assembly1.cif.gz_A crystal structure of b. subtilis seca with bound peptide 0.8904 21 849
ID Description Score Start End Superfamily
af_A0A1D6MS70_87_296_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9596 20 227 3.40.50.300
af_A0A1D6MS70_87_296_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9463 20 227 3.40.50.300
af_O06446_605_782_1.10.3060.10 Mainly Alpha;Orthogonal Bundle;Helical scaffold and wing domains of SecA;Helical scaffold and wing domains of SecA 0.9298 669 849 1.10.3060.10
2ibmB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9253 14 402 3.40.50.300
af_O06446_605_782_1.10.3060.10 Mainly Alpha;Orthogonal Bundle;Helical scaffold and wing domains of SecA;Helical scaffold and wing domains of SecA 0.9199 669 849 1.10.3060.10
ID Description Score Start End GO Terms
AF-A0A7S2S437-F1-model_v4 SecA family profile domain-containing protein 0.9894 25 155 GO:0005524
GO:0006605
GO:0006886
GO:0016020
GO:0017038
AF-A0A6N6X6J1-F1-model_v4 deleted 0.9883 22 170
AF-A0A534ILX1-F1-model_v4 Preprotein translocase subunit SecA 0.9868 67 181 GO:0005524
GO:0005829
GO:0005886
GO:0006605
GO:0006886
GO:0017038
AF-A0A356W8K2-F1-model_v4 Preprotein translocase subunit SecA 0.9848 1 166 GO:0005524
GO:0005829
GO:0005886
GO:0006605
GO:0006886
GO:0017038
GO:0031522
GO:0043952
AF-A0A7C2I7D3-F1-model_v4 Preprotein translocase subunit SecA 0.9841 1 178 GO:0005524
GO:0005829
GO:0005886
GO:0006605
GO:0006886
GO:0017038
GO:0031522
GO:0043952

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