F352884

General Info

Members Datasets Scaffolds Average Seq Length
240 157 480 280

Family's Representative Sequence

Representative Sequence 3300014326|Ga0157380_10427488|Ga0157380_104274881
Length 304
Sequence MQWKSIQFFPAVPWKIIFSHSLLQTMWTLLQIEIFKIFKRPRTYISFLAITVIVTLIQLAFYADGGAYMDFALQALKDRFEINGQLLNGYFICYLVLQTLLIHVPLLITLVAGDVLSGEANMGTLRMLLTKPISRTTILLSKFIAAVIYAIILLAWMAFLSLVVSILIFGTDDLLIFKSDGAVLLRESDVMWRFIAAFVFGAIGMTTVTALALLLSVFADNSIGPIVGTMSVIILFTILSSLNLPFFNLINPLLFTRHMLAWKAFFNDTVNYGSVFRSALVLMLHIVLFIGISIFVFRKKDILS

Samples

Sample ID Description Type Environment
1 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
5 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
6 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
7 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
10 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
11 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
12 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
13 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
14 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
15 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
16 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
17 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
18 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
19 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
20 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
21 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
22 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
23 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
24 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
25 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
26 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
27 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
28 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
29 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
30 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
31 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
32 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
33 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
34 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
35 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
36 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
37 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
38 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
39 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
40 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
41 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
43 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
44 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
47 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
48 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
49 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
50 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
51 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
52 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
53 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
54 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
55 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
56 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
57 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
58 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
59 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
60 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
61 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
62 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
63 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
64 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
65 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
66 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300027552 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S AM (SPAdes) (version 2) Metagenome Rhizosphere
105 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
107 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
108 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
109 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
110 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
111 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
112 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
113 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
114 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
115 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
116 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
117 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
118 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
119 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
120 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
121 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
122 3300042124 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_082716_2423 Metagenome Rhizosphere
123 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
124 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
125 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
126 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
127 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
128 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
129 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
130 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
131 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
132 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
133 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
134 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
135 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
136 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
137 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
138 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
139 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
140 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049703 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control Metagenome Rhizosphere
142 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
143 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
145 3300050005 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought Metagenome Rhizosphere
146 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
147 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
148 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
149 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
150 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
151 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
152 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
153 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
154 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
155 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
156 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
157 2738541278 Niastella sp. CF465 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.58
Metatranscriptomes 0
Isolates 0.42

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.42
Nodule 0
Rhizoplane 2.08
Rhizosphere 87.92
Stem 0
Stem Tuber 0
Unclassified 7.5

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0157380_10427488 3300014326 Bacteria 1265
2 SwRhRL2b_contig_1887178 2162886007 Bacteria 121938
3 JGI25406J46586_10000315 3300003203 Bacteria 21853
4 rootH2_10048088 3300003320 Bacteria 13084
5 rootL2_10138783 3300003322 Bacteria 3115
6 rootL2_10159482 3300003322 Bacteria 1627
7 rootH1_10066032 3300003323 Bacteria 15371
8 Ga0065704_10070136 3300005289 Bacteria 560402
9 Ga0070670_100113629 3300005331 Unclassified 2334
10 Ga0070670_100124953 3300005331 Bacteria 2221
11 Ga0070670_100207553 3300005331 Bacteria 1703
12 Ga0070670_100287363 3300005331 Bacteria 1436
13 Ga0068869_100186921 3300005334 Bacteria 1627
14 Ga0070682_100007258 3300005337 Bacteria 6246
15 Ga0068868_100364137 3300005338 Bacteria 1241
16 Ga0070660_100017255 3300005339 Bacteria 5259
17 Ga0070661_100022586 3300005344 Bacteria 4505
18 Ga0070668_100326750 3300005347 Bacteria 1292
19 Ga0070669_100206383 3300005353 Bacteria 1548
20 Ga0070674_100171867 3300005356 Unclassified 1653
21 Ga0070674_100224251 3300005356 Unclassified 1464
22 Ga0070673_100227819 3300005364 Bacteria 1616
23 Ga0070673_100326238 3300005364 Bacteria 1357
24 Ga0070688_100320725 3300005365 Bacteria 1126
25 Ga0070659_100030025 3300005366 Bacteria 4204
26 Ga0070667_100009050 3300005367 Bacteria 8243
27 Ga0070667_100314619 3300005367 Bacteria 1412
28 Ga0070700_100072866 3300005441 Unclassified 2197
29 Ga0070662_100179144 3300005457 Bacteria 1670
30 Ga0070681_10059529 3300005458 Bacteria 3799
31 Ga0068867_100083987 3300005459 Bacteria 2405
32 Ga0068867_100112795 3300005459 Bacteria 2091
33 Ga0068867_100271743 3300005459 Bacteria 1386
34 Ga0070679_100014019 3300005530 Bacteria 7684
35 Ga0070684_100013501 3300005535 Bacteria 6589
36 Ga0068853_100020616 3300005539 Bacteria 5482
37 Ga0068853_100149690 3300005539 Bacteria 2100
38 Ga0068853_100240520 3300005539 Bacteria 1659
39 Ga0070686_100058422 3300005544 Bacteria 2481
40 Ga0070693_100034956 3300005547 Bacteria 2784
41 Ga0068855_100018879 3300005563 Bacteria 8288
42 Ga0070664_100058264 3300005564 Bacteria 3285
43 Ga0070664_100412867 3300005564 Bacteria 1235
44 Ga0068857_100018288 3300005577 Bacteria 6148
45 Ga0068857_100075201 3300005577 Bacteria 3011
46 Ga0068857_100153709 3300005577 Bacteria 2086
47 Ga0068856_100005029 3300005614 Bacteria 13093
48 Ga0068852_100006702 3300005616 Bacteria 8351
49 Ga0068852_100786817 3300005616 Bacteria 965
50 Ga0068864_100455808 3300005618 Bacteria 1224
51 Ga0068863_100136530 3300005841 Bacteria 2343
52 Ga0068858_100103912 3300005842 Bacteria 2651
53 Ga0068860_100199383 3300005843 Bacteria 1939
54 Ga0068860_100384392 3300005843 Bacteria 1386
55 Ga0068860_100614571 3300005843 Bacteria 1093
56 Ga0068860_100643899 3300005843 Bacteria 1067
57 Ga0081539_10000042 3300005985 Bacteria 289955
58 Ga0075366_10190890 3300006195 Bacteria 1245
59 Ga0097621_100000129 3300006237 Bacteria 44253
60 Ga0068871_100000075 3300006358 Bacteria 55346
61 Ga0068871_100004743 3300006358 Bacteria 9504
62 Ga0105240_10243099 3300009093 Bacteria 2086
63 Ga0111539_10360468 3300009094 Bacteria 1692
64 Ga0114129_10011343 3300009147 Bacteria 12693
65 Ga0105241_10138673 3300009174 Bacteria 1978
66 Ga0105241_10520497 3300009174 Bacteria 1064
67 Ga0105242_10024576 3300009176 Bacteria 4759
68 Ga0105242_10557949 3300009176 Bacteria 1099
69 Ga0105237_10006428 3300009545 Bacteria 13035
70 Ga0105237_10048463 3300009545 Bacteria 4271
71 Ga0105249_10002584 3300009553 Bacteria 15666
72 Ga0105249_10057466 3300009553 Bacteria 3564
73 Ga0105239_10001283 3300010375 Bacteria 33928
74 Ga0157373_10024614 3300013100 Bacteria 4360
75 Ga0157371_10015988 3300013102 Bacteria 5613
76 Ga0157371_10031131 3300013102 Bacteria 3844
77 Ga0157371_10050985 3300013102 Bacteria 2940
78 Ga0157371_10155704 3300013102 Bacteria 1631
79 Ga0157370_10062216 3300013104 Bacteria 3540
80 Ga0157370_10238117 3300013104 Bacteria 1684
81 Ga0157369_10021997 3300013105 Bacteria 7126
82 Ga0157374_10165110 3300013296 Bacteria 2158
83 Ga0157378_10007157 3300013297 Bacteria 9745
84 Ga0157378_10010730 3300013297 Bacteria 8008
85 Ga0157378_10043371 3300013297 Bacteria 3994
86 Ga0157378_10084895 3300013297 Bacteria 2868
87 Ga0163162_10001415 3300013306 Bacteria 22313
88 Ga0163162_10003780 3300013306 Bacteria 14510
89 Ga0163162_10027026 3300013306 Bacteria 5675
90 Ga0163162_10111115 3300013306 Bacteria 2838
91 Ga0157372_10039715 3300013307 Bacteria 5195
92 Ga0157372_10050094 3300013307 Bacteria 4646
93 Ga0157372_10075600 3300013307 Bacteria 3801
94 Ga0157372_10126866 3300013307 Bacteria 2934
95 Ga0157372_10139337 3300013307 Bacteria 2794
96 Ga0157372_10210044 3300013307 Bacteria 2256
97 Ga0157372_10214620 3300013307 Bacteria 2230
98 Ga0157372_10236232 3300013307 Unclassified 2120
99 Ga0157375_10000327 3300013308 Bacteria 42691
100 Ga0157375_10126172 3300013308 Unclassified 2674
101 Ga0163163_10000191 3300014325 Bacteria 63102
102 Ga0163163_10098885 3300014325 Bacteria 2939
103 Ga0163163_10160150 3300014325 Bacteria 2296
104 Ga0157380_10004620 3300014326 Bacteria 9565
105 Ga0157380_10103099 3300014326 Bacteria 2380
106 Ga0157377_10002841 3300014745 Bacteria 7735
107 Ga0157377_10004428 3300014745 Bacteria 6466
108 Ga0157379_10082238 3300014968 Unclassified 2886
109 Ga0157379_10179382 3300014968 Bacteria 1913
110 Ga0157379_10308998 3300014968 Bacteria 1442
111 Ga0157376_10000413 3300014969 Bacteria 27856
112 Ga0157376_10051371 3300014969 Bacteria 3424
113 Ga0157376_10310593 3300014969 Unclassified 1496
114 Ga0157376_10881186 3300014969 Bacteria 912
115 Ga0163161_10001316 3300017792 Bacteria 18501
116 Ga0163161_10353709 3300017792 Unclassified 1168
117 Ga0209646_1001847 3300025246 Bacteria 5226
118 Ga0207680_10055373 3300025903 Bacteria 2390
119 Ga0207647_10019663 3300025904 Bacteria 4539
120 Ga0207645_10052414 3300025907 Bacteria 2607
121 Ga0207654_10234442 3300025911 Bacteria 1224
122 Ga0207707_10310134 3300025912 Bacteria 1363
123 Ga0207695_10345226 3300025913 Bacteria 1376
124 Ga0207662_10019239 3300025918 Bacteria 3883
125 Ga0207657_10028234 3300025919 Bacteria 5121
126 Ga0207649_10075099 3300025920 Bacteria 2171
127 Ga0207652_10095611 3300025921 Bacteria 2617
128 Ga0207650_10036191 3300025925 Bacteria 3589
129 Ga0207650_10305795 3300025925 Bacteria 1300
130 Ga0207659_10419282 3300025926 Unclassified 1122
131 Ga0207659_10474430 3300025926 Bacteria 1056
132 Ga0207700_10482011 3300025928 Bacteria 1096
133 Ga0207644_10251293 3300025931 Bacteria 1411
134 Ga0207690_10064862 3300025932 Bacteria 2495
135 Ga0207706_10009104 3300025933 Bacteria 9129
136 Ga0207686_10177766 3300025934 Bacteria 1507
137 Ga0207686_10225865 3300025934 Bacteria 1355
138 Ga0207670_10378349 3300025936 Bacteria 1127
139 Ga0207669_10186285 3300025937 Bacteria 1493
140 Ga0207704_10460135 3300025938 Unclassified 1017
141 Ga0207691_10013541 3300025940 Bacteria 7799
142 Ga0207691_10042299 3300025940 Bacteria 4201
143 Ga0207691_10282089 3300025940 Bacteria 1429
144 Ga0207689_10002426 3300025942 Bacteria 17350
145 Ga0207689_10154838 3300025942 Bacteria 1889
146 Ga0207661_10068401 3300025944 Bacteria 2892
147 Ga0207679_10032938 3300025945 Bacteria 3644
148 Ga0207679_10359445 3300025945 Bacteria 1271
149 Ga0207667_10001378 3300025949 Bacteria 30467
150 Ga0207651_10193377 3300025960 Unclassified 1625
151 Ga0207651_10219919 3300025960 Bacteria 1535
152 Ga0207651_10395299 3300025960 Bacteria 1175
153 Ga0207712_10043947 3300025961 Bacteria 3085
154 Ga0207668_10053952 3300025972 Bacteria 2788
155 Ga0207658_10009222 3300025986 Bacteria 6689
156 Ga0207677_10225996 3300026023 Bacteria 1504
157 Ga0207703_10131782 3300026035 Bacteria 2160
158 Ga0207639_10039388 3300026041 Bacteria 3521
159 Ga0207639_10227304 3300026041 Bacteria 1615
160 Ga0207639_10498477 3300026041 Bacteria 1112
161 Ga0207702_10036942 3300026078 Bacteria 4086
162 Ga0207648_10216753 3300026089 Bacteria 1700
163 Ga0207676_10232174 3300026095 Bacteria 1650
164 Ga0207674_10056277 3300026116 Bacteria 3995
165 Ga0207674_10067799 3300026116 Bacteria 3591
166 Ga0207674_10086703 3300026116 Bacteria 3125
167 Ga0207675_100200420 3300026118 Bacteria 1917
168 Ga0207675_100495602 3300026118 Bacteria 1215
169 Ga0207698_10005824 3300026142 Bacteria 7654
170 Ga0209982_1013720 3300027552 Bacteria 1221
171 Ga0268264_10234659 3300028381 Bacteria 1696
172 Ga0265338_10064621 3300028800 Bacteria 3181
173 Ga0265327_10000030 3300031251 Bacteria 333531
174 Ga0265316_10066689 3300031344 Bacteria 2785
175 Ga0307513_10112989 3300031456 Bacteria 2705
176 Ga0307513_10183420 3300031456 Bacteria 1953
177 Ga0307513_10210548 3300031456 Bacteria 1776
178 Ga0307414_10028831 3300032004 Unclassified 3605
179 Ga0307411_10387137 3300032005 Bacteria 1152
180 Ga0373927_0013497 3300035695 Bacteria 5428
181 Ga0373925_0442301 3300037068 Unclassified 1064
182 Ga0400483_142988 3300039062 Bacteria 1272
183 Ga0439436_0008707 3300041404 Bacteria 3119
184 Ga0439439_0030909 3300041406 Bacteria 1363
185 Ga0439439_0054547 3300041406 Bacteria 1053
186 Ga0451791_1598316 3300041451 Bacteria 1198
187 Ga0451853_2779953 3300041512 Bacteria 1309
188 Ga0439442_022097 3300042002 Bacteria 1320
189 Ga0439449_0009521 3300042007 Unclassified 3681
190 Ga0439449_0110312 3300042007 Bacteria 1019
191 Ga0439457_000368 3300042014 Bacteria 12639
192 Ga0439457_022175 3300042014 Bacteria 1406
193 Ga0450922_004716 3300042124 Bacteria 1257
194 Ga0451577_0057833 3300042876 Bacteria 3456
195 Ga0466972_0000016 3300044658 Bacteria 208802
196 Ga0466972_0000105 3300044658 Bacteria 73294
197 Ga0466972_0012502 3300044658 Bacteria 4266
198 Ga0466965_0191543 3300044683 Bacteria 1082
199 Ga0466966_0073637 3300044684 Bacteria 2135
200 Ga0466961_0182903 3300044693 Bacteria 1301
201 Ga0453684_0039840 3300044712 Bacteria 6392
202 Ga0453684_0149338 3300044712 Bacteria 2779
203 Ga0453684_0242970 3300044712 Bacteria 2072
204 Ga0466971_0080941 3300044719 Bacteria 1481
205 Ga0466971_0121174 3300044719 Bacteria 1211
206 Ga0466970_0000705 3300044765 Bacteria 16339
207 Ga0466957_0004771 3300044842 Bacteria 7589
208 Ga0466957_0005187 3300044842 Bacteria 7288
209 Ga0466957_0244748 3300044842 Bacteria 1191
210 Ga0466960_0201433 3300044901 Bacteria 1088
211 Ga0466959_0000076 3300045049 Bacteria 62314
212 Ga0451576_0227644 3300045051 Bacteria 1947
213 Ga0495668_0002496 3300046616 Bacteria 15050
214 Ga0496101_0025782 3300048904 Bacteria 4081
215 Ga0496105_0095267 3300048908 Bacteria 2459
216 Ga0496108_0363901 3300048911 Bacteria 1263
217 Ga0496109_0180407 3300048912 Bacteria 1983
218 Ga0501034_0000007 3300049571 Bacteria 357805
219 Ga0501034_0255086 3300049571 Bacteria 1698
220 Ga0501219_000061 3300049703 Bacteria 17816
221 Ga0501225_0000229 3300049705 Bacteria 17619
222 Ga0501035_0067607 3300049822 Unclassified 3170
223 Ga0501035_0145606 3300049822 Bacteria 2058
224 Ga0501044_0006455 3300049823 Bacteria 12954
225 Ga0501284_00006 3300050005 Bacteria 153628
226 nmdc:mga0k408_222257_c1 3300050493 Bacteria 1127
227 nmdc:mga05p37_42812_c1 3300050507 Bacteria 5566
228 Ga0500578_0000100 3300053086 Bacteria 99827
229 Ga0500578_0037246 3300053086 Bacteria 3124
230 Ga0500578_0125755 3300053086 Bacteria 1610
231 Ga0500583_0000009 3300053092 Bacteria 160749
232 Ga0500583_0018367 3300053092 Bacteria 2841
233 Ga0500594_0038938 3300053118 Unclassified 1291
234 Ga0500559_0030819 3300053136 Unclassified 2300
235 Ga0500588_0099962 3300053146 Bacteria 999
236 Ga0500604_0003653 3300053151 Bacteria 4135
237 Ga0500619_007055 3300053154 Bacteria 2634
238 Ga0500622_0061316 3300053156 Bacteria 1917
239 Ga0466962_0069886 3300061719 Bacteria 1677
240 2738725932 2738541278 Bacteria 9755573
241 Ga0157380_10427488
242 SwRhRL2b_contig_1887178
243 JGI25406J46586_10000315
244 rootH2_10048088
245 rootL2_10138783
246 rootL2_10159482
247 rootH1_10066032
248 Ga0065704_10070136
249 Ga0070670_100113629
250 Ga0070670_100124953
251 Ga0070670_100207553
252 Ga0070670_100287363
253 Ga0068869_100186921
254 Ga0070682_100007258
255 Ga0068868_100364137
256 Ga0070660_100017255
257 Ga0070661_100022586
258 Ga0070668_100326750
259 Ga0070669_100206383
260 Ga0070674_100171867
261 Ga0070674_100224251
262 Ga0070673_100227819
263 Ga0070673_100326238
264 Ga0070688_100320725
265 Ga0070659_100030025
266 Ga0070667_100009050
267 Ga0070667_100314619
268 Ga0070700_100072866
269 Ga0070662_100179144
270 Ga0070681_10059529
271 Ga0068867_100083987
272 Ga0068867_100112795
273 Ga0068867_100271743
274 Ga0070679_100014019
275 Ga0070684_100013501
276 Ga0068853_100020616
277 Ga0068853_100149690
278 Ga0068853_100240520
279 Ga0070686_100058422
280 Ga0070693_100034956
281 Ga0068855_100018879
282 Ga0070664_100058264
283 Ga0070664_100412867
284 Ga0068857_100018288
285 Ga0068857_100075201
286 Ga0068857_100153709
287 Ga0068856_100005029
288 Ga0068852_100006702
289 Ga0068852_100786817
290 Ga0068864_100455808
291 Ga0068863_100136530
292 Ga0068858_100103912
293 Ga0068860_100199383
294 Ga0068860_100384392
295 Ga0068860_100614571
296 Ga0068860_100643899
297 Ga0081539_10000042
298 Ga0075366_10190890
299 Ga0097621_100000129
300 Ga0068871_100000075
301 Ga0068871_100004743
302 Ga0105240_10243099
303 Ga0111539_10360468
304 Ga0114129_10011343
305 Ga0105241_10138673
306 Ga0105241_10520497
307 Ga0105242_10024576
308 Ga0105242_10557949
309 Ga0105237_10006428
310 Ga0105237_10048463
311 Ga0105249_10002584
312 Ga0105249_10057466
313 Ga0105239_10001283
314 Ga0157373_10024614
315 Ga0157371_10015988
316 Ga0157371_10031131
317 Ga0157371_10050985
318 Ga0157371_10155704
319 Ga0157370_10062216
320 Ga0157370_10238117
321 Ga0157369_10021997
322 Ga0157374_10165110
323 Ga0157378_10007157
324 Ga0157378_10010730
325 Ga0157378_10043371
326 Ga0157378_10084895
327 Ga0163162_10001415
328 Ga0163162_10003780
329 Ga0163162_10027026
330 Ga0163162_10111115
331 Ga0157372_10039715
332 Ga0157372_10050094
333 Ga0157372_10075600
334 Ga0157372_10126866
335 Ga0157372_10139337
336 Ga0157372_10210044
337 Ga0157372_10214620
338 Ga0157372_10236232
339 Ga0157375_10000327
340 Ga0157375_10126172
341 Ga0163163_10000191
342 Ga0163163_10098885
343 Ga0163163_10160150
344 Ga0157380_10004620
345 Ga0157380_10103099
346 Ga0157377_10002841
347 Ga0157377_10004428
348 Ga0157379_10082238
349 Ga0157379_10179382
350 Ga0157379_10308998
351 Ga0157376_10000413
352 Ga0157376_10051371
353 Ga0157376_10310593
354 Ga0157376_10881186
355 Ga0163161_10001316
356 Ga0163161_10353709
357 Ga0209646_1001847
358 Ga0207680_10055373
359 Ga0207647_10019663
360 Ga0207645_10052414
361 Ga0207654_10234442
362 Ga0207707_10310134
363 Ga0207695_10345226
364 Ga0207662_10019239
365 Ga0207657_10028234
366 Ga0207649_10075099
367 Ga0207652_10095611
368 Ga0207650_10036191
369 Ga0207650_10305795
370 Ga0207659_10419282
371 Ga0207659_10474430
372 Ga0207700_10482011
373 Ga0207644_10251293
374 Ga0207690_10064862
375 Ga0207706_10009104
376 Ga0207686_10177766
377 Ga0207686_10225865
378 Ga0207670_10378349
379 Ga0207669_10186285
380 Ga0207704_10460135
381 Ga0207691_10013541
382 Ga0207691_10042299
383 Ga0207691_10282089
384 Ga0207689_10002426
385 Ga0207689_10154838
386 Ga0207661_10068401
387 Ga0207679_10032938
388 Ga0207679_10359445
389 Ga0207667_10001378
390 Ga0207651_10193377
391 Ga0207651_10219919
392 Ga0207651_10395299
393 Ga0207712_10043947
394 Ga0207668_10053952
395 Ga0207658_10009222
396 Ga0207677_10225996
397 Ga0207703_10131782
398 Ga0207639_10039388
399 Ga0207639_10227304
400 Ga0207639_10498477
401 Ga0207702_10036942
402 Ga0207648_10216753
403 Ga0207676_10232174
404 Ga0207674_10056277
405 Ga0207674_10067799
406 Ga0207674_10086703
407 Ga0207675_100200420
408 Ga0207675_100495602
409 Ga0207698_10005824
410 Ga0209982_1013720
411 Ga0268264_10234659
412 Ga0265338_10064621
413 Ga0265327_10000030
414 Ga0265316_10066689
415 Ga0307513_10112989
416 Ga0307513_10183420
417 Ga0307513_10210548
418 Ga0307414_10028831
419 Ga0307411_10387137
420 Ga0373927_0013497
421 Ga0373925_0442301
422 Ga0400483_142988
423 Ga0439436_0008707
424 Ga0439439_0030909
425 Ga0439439_0054547
426 Ga0451791_1598316
427 Ga0451853_2779953
428 Ga0439442_022097
429 Ga0439449_0009521
430 Ga0439449_0110312
431 Ga0439457_000368
432 Ga0439457_022175
433 Ga0450922_004716
434 Ga0451577_0057833
435 Ga0466972_0000016
436 Ga0466972_0000105
437 Ga0466972_0012502
438 Ga0466965_0191543
439 Ga0466966_0073637
440 Ga0466961_0182903
441 Ga0453684_0039840
442 Ga0453684_0149338
443 Ga0453684_0242970
444 Ga0466971_0080941
445 Ga0466971_0121174
446 Ga0466970_0000705
447 Ga0466957_0004771
448 Ga0466957_0005187
449 Ga0466957_0244748
450 Ga0466960_0201433
451 Ga0466959_0000076
452 Ga0451576_0227644
453 Ga0495668_0002496
454 Ga0496101_0025782
455 Ga0496105_0095267
456 Ga0496108_0363901
457 Ga0496109_0180407
458 Ga0501034_0000007
459 Ga0501034_0255086
460 Ga0501219_000061
461 Ga0501225_0000229
462 Ga0501035_0067607
463 Ga0501035_0145606
464 Ga0501044_0006455
465 Ga0501284_00006
466 nmdc:mga0k408_222257_c1
467 nmdc:mga05p37_42812_c1
468 Ga0500578_0000100
469 Ga0500578_0037246
470 Ga0500578_0125755
471 Ga0500583_0000009
472 Ga0500583_0018367
473 Ga0500594_0038938
474 Ga0500559_0030819
475 Ga0500588_0099962
476 Ga0500604_0003653
477 Ga0500619_007055
478 Ga0500622_0061316
479 Ga0466962_0069886
480 2738725932

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12730

ABC2_membrane_4

ABC-2 family transporter protein

29

236

0.73

PF12679

ABC2_membrane_2

ABC-2 family transporter protein

27

302

0.71

Structural Annotation

Top 5 Hits

ID Description Score Start End
7znq-assembly1.cif.gz_y abc transporter complex nosdfyl in gdn 0.6157 2 259
7znq-assembly1.cif.gz_y abc transporter complex nosdfyl in gdn 0.6017 2 259
7o0z-assembly1.cif.gz_E abc transporter nosfy, nucleotide-free in gdn 0.5917 2 258
7osf-assembly1.cif.gz_E abc transporter complex nosdfyl, r-domain 1 0.586 2 258
7o0z-assembly1.cif.gz_E abc transporter nosfy, nucleotide-free in gdn 0.5805 2 258
ID Description Score Start End Superfamily
af_Q86P18_394_773_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.5658 51 253 3.40.1710.10
af_Q9VMM9_322_706_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.5453 51 250 3.40.1710.10
af_Q86P18_394_773_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.4579 51 253 3.40.1710.10
af_Q2G1V6_3_205_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.4517 1 253 1.10.3720.10
af_Q2G1V6_3_205_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.4466 1 253 1.10.3720.10
ID Description Score Start End GO Terms
AF-A0A3D5J5M3-F1-model_v4 ABC transporter permease 0.9437 2 177 GO:0016020
AF-A0A136KMM7-F1-model_v4 ABC-2 family transporter protein 0.9402 2 174 GO:0005886
GO:0140359
AF-A0A660ZRR7-F1-model_v4 ABC transporter permease 0.9366 2 262 GO:0005886
GO:0140359
AF-A0A0C1KXI5-F1-model_v4 ABC transporter permease 0.9327 2 262 GO:0016020
AF-A0A660ZRR7-F1-model_v4 ABC transporter permease 0.9298 2 262 GO:0005886
GO:0140359

Map