F353073

General Info

Members Datasets Scaffolds Average Seq Length
240 175 480 483

Family's Representative Sequence

Representative Sequence 3300039447|Ga0436361_0375424|Ga0436361_0375424_136_1830
Length 564
Sequence MYSQSTTLGKHDHCLGNQFMGTSMSFEGFPTTMRRASSGSTTSAIASSRGAGMTHKIFRRPPWRPAPLALVAALAVAGCAVGPDFQSPAPPPVAEAGHPYTPAAMPAQTASAPGGTGTPQVFVDGQDIPAAWWEAFHAPALDELVRAAIAHSPSLAAAQATLREAKENYEADYGNRMLPAVTGQVGGERQKVALGAIGGAPTGTTYNVFSAQVDVSYTVDLFGANRRELESVAAQIDYQRFQVEAAYLSLSANVVATAIQEAALREQLQATRDVVEAEQKSLDLIERQAQLGAVAKSVVLQQRTLVAQTQAQLPALDKQLAQTRHQLAVLVGRLPGDGGMPEFRLDGLTLPHELPVSVPSALVRQRPDVRASEALLHQASADIGVATAALYPQVTLSGAVDRQSLKLDKLFSMGTTGWSLLGGIAQPIFNGGALHAKKRAAVAAYDAANAQYQETVLNAFLSVANALRAIDTDAEGLRAQAEAESLAKDSLDLVERQYRLGAVSYLASLDAQRTWLQTRVALAQARAARLADTAVLFQALGGGWWNAPDAVASLGADAASAPTH

Samples

Sample ID Description Type Environment
1 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
2 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
3 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
4 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
5 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
6 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
7 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
8 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
9 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
10 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
11 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
12 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
13 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
14 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
15 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
16 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
17 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
18 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
19 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
20 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
21 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
22 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
23 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
24 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
25 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
26 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
27 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
28 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
29 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
30 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
31 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
32 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
33 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
34 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
35 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
36 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
37 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
38 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
39 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
40 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
41 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
42 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
43 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
44 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
45 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
46 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
47 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
48 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
49 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
61 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
62 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
63 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
64 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
65 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
66 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
67 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
68 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
69 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
70 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
71 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
72 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
73 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
74 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
75 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
76 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
77 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
78 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
79 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
80 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
81 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
82 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
83 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
84 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
85 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
86 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
87 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
88 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
89 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
90 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
91 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
92 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
93 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
94 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
95 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
96 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
97 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
98 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
99 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
100 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
101 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
102 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
103 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
104 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
105 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
106 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
107 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
108 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
109 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
110 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
111 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
112 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
113 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
114 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
115 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
116 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
117 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
118 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
119 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
120 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
121 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
122 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
123 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
124 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
125 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
126 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
127 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
128 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
129 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
130 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
131 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
132 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
133 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
134 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
135 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
136 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
137 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
138 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
139 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
141 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
142 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
143 3300053145 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 endosphere Metagenome Endosphere
144 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
145 2524023228 Bradyrhizobium sp. Th.b2 Isolate Nodule
146 2721755763 Pandoraea thiooxydans ATSB16 Isolate Rhizosphere
147 2728368998 Bradyrhizobium macuxiense BR 10303 Isolate Nodule
148 2738541297 Duganella sp. GV083 Isolate Unclassified
149 2738541357 Duganella sp. GV053 Isolate Unclassified
150 2738543003 Duganella sp. GV066 Isolate Unclassified
151 2738543026 Duganella sp. GV089 Isolate Unclassified
152 2738543029 Duganella sp. GV039 Isolate Unclassified
153 2744054633 Bradyrhizobium neotropicale BR 10247 Isolate Unclassified
154 2791355197 Bradyrhizobium sp. C9 Isolate Nodule
155 2821131069 Duganella sp. 1224 Isolate Unclassified
156 2842711865 Duganella sp. R-73148 Isolate Unclassified
157 2846033681 Chromobacterium sinusclupearum MWU13-2610 Isolate Rhizosphere
158 2846037992 Chromobacterium alticapitis MWU14-2602 Isolate Rhizosphere
159 2857553236 Duganella sp. R-74557 Isolate Unclassified
160 2857558681 Duganella sp. R-74565 Isolate Unclassified
161 2857564685 Duganella sp. R-74599 Isolate Unclassified
162 2885374607 Bradyrhizobium sp. NAS96.2 Isolate Unclassified
163 2885409591 Bradyrhizobium sp. NAS80.1 Isolate Unclassified
164 2903748898 Bradyrhizobium uaiense UFLA 03-164 Isolate Nodule
165 2904424332 Duganella sp. 1411 Isolate Rhizosphere
166 2904699407
167 2906610324
168 2908739725 Bradyrhizobium sp. UFLA03-84 Isolate Nodule
169 2919476304 Duganella sp. 3397 Isolate Unclassified
170 2922425934
171 3005474847 Bradyrhizobium sp. CCBAU 53421 Isolate Nodule
172 8006933436 Bradyrhizobium septentrionale 7(2017) Isolate Unclassified
173 8006973647 Bradyrhizobium septentrionale 162S2 Isolate Nodule
174 8019555841 Bradyrhizobium sp. JR6.1 Isolate Nodule
175 8019565922 Bradyrhizobium sp. JR3.5 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 88.19
Metatranscriptomes 0
Isolates 11.81

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.92
Nodule 3.75
Rhizoplane 0
Rhizosphere 65.42
Stem 0
Stem Tuber 0
Unclassified 1.25

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0436361_0375424 3300039447 Bacteria 2396
2 JGI25156J39149_1000286 3300002705 Bacteria 34121
3 JGI25154J39366_1000958 3300002738 Bacteria 11893
4 JGI25157J39369_1000107 3300002741 Bacteria 70500
5 rootH1_10020354 3300003316 Bacteria 6122
6 rootH2_10011138 3300003320 Bacteria 6352
7 rootL2_10000127 3300003322 Bacteria 8474
8 rootL2_10003661 3300003322 Bacteria 4676
9 rootH1_10003525 3300003323 Bacteria 2770
10 rootH1_10003526 3300003323 Bacteria 3724
11 Ga0055539_1000450 3300003752 Bacteria 14130
12 Ga0055539_1000526 3300003752 Bacteria 11681
13 Ga0055533_1000025 3300003756 Bacteria 332208
14 Ga0055525_1000692 3300003759 Bacteria 12468
15 Ga0055529_1000617 3300003763 Bacteria 26676
16 Ga0070658_10000986 3300005327 Bacteria 24454
17 Ga0068869_100060275 3300005334 Bacteria 2781
18 Ga0070660_100042047 3300005339 Bacteria 3486
19 Ga0070708_100055057 3300005445 Bacteria 3536
20 Ga0070698_100005075 3300005471 Bacteria 14415
21 Ga0070698_100129172 3300005471 Bacteria 2483
22 Ga0070699_100184427 3300005518 Bacteria 1852
23 Ga0070697_100002459 3300005536 Bacteria 14260
24 Ga0070697_100122681 3300005536 Bacteria 2174
25 Ga0070665_100004413 3300005548 Bacteria 14779
26 Ga0068855_100000456 3300005563 Bacteria 50301
27 Ga0068855_100033942 3300005563 Bacteria 6087
28 Ga0068855_100330960 3300005563 Bacteria 1681
29 Ga0068857_100012493 3300005577 Bacteria 7393
30 Ga0068854_100016227 3300005578 Bacteria 4960
31 Ga0068856_100001941 3300005614 Bacteria 21546
32 Ga0081540_1048955 3300005983 Bacteria 2113
33 Ga0105240_10000420 3300009093 Bacteria 78578
34 Ga0105240_10208343 3300009093 Bacteria 2286
35 Ga0105237_10054685 3300009545 Bacteria 3999
36 Ga0105237_10060184 3300009545 Bacteria 3799
37 Ga0105237_10075830 3300009545 Bacteria 3353
38 Ga0105239_10006833 3300010375 Bacteria 13163
39 Ga0157378_10243320 3300013297 Bacteria 1719
40 Ga0157375_10049846 3300013308 Bacteria 4105
41 Ga0182008_10056542 3300014497 Bacteria 1938
42 Ga0157376_10209670 3300014969 Bacteria 1798
43 Ga0182006_1000017 3300015261 Bacteria 299454
44 Ga0182007_10002735 3300015262 Bacteria 8620
45 Ga0182005_1000051 3300015265 Bacteria 114808
46 Ga0213872_10000001 3300021361 Bacteria 662532
47 Ga0213872_10000040 3300021361 Bacteria 122419
48 Ga0213872_10000744 3300021361 Bacteria 24091
49 Ga0213872_10014636 3300021361 Bacteria 3657
50 Ga0213872_10030877 3300021361 Bacteria 2456
51 Ga0213876_10023517 3300021384 Unclassified 3255
52 Ga0209674_100007 3300025226 Bacteria 1077082
53 Ga0209563_100033 3300025230 Bacteria 457883
54 Ga0209258_100502 3300025242 Bacteria 38791
55 Ga0209646_1000160 3300025246 Bacteria 91529
56 Ga0209026_1000020 3300025250 Bacteria 376211
57 Ga0209026_1004878 3300025250 Bacteria 3804
58 Ga0209677_100015 3300025253 Bacteria 532137
59 Ga0209677_100290 3300025253 Bacteria 33162
60 Ga0209759_1000017 3300025256 Bacteria 376232
61 Ga0209233_1002966 3300025261 Bacteria 6052
62 Ga0209455_1000043 3300025272 Bacteria 413928
63 Ga0209564_1000011 3300025295 Bacteria 822327
64 Ga0209051_1000867 3300025303 Bacteria 30608
65 Ga0207705_10001052 3300025909 Bacteria 22439
66 Ga0207684_10088895 3300025910 Bacteria 2632
67 Ga0207654_10071217 3300025911 Bacteria 2066
68 Ga0207695_10007796 3300025913 Bacteria 13556
69 Ga0207695_10014692 3300025913 Bacteria 9258
70 Ga0207671_10012455 3300025914 Bacteria 6834
71 Ga0207657_10053366 3300025919 Bacteria 3502
72 Ga0207689_10027356 3300025942 Bacteria 4775
73 Ga0207667_10011148 3300025949 Bacteria 10464
74 Ga0207667_10011929 3300025949 Bacteria 10064
75 Ga0207702_10000486 3300026078 Bacteria 44693
76 Ga0207674_10009823 3300026116 Bacteria 10894
77 Ga0268266_10002983 3300028379 Bacteria 17447
78 Ga0265334_10013896 3300028573 Unclassified 3363
79 Ga0265318_10011916 3300028577 Bacteria 3719
80 Ga0265336_10011271 3300028666 Bacteria 3045
81 Ga0307517_10001421 3300028786 Bacteria 40285
82 Ga0307517_10062896 3300028786 Bacteria 3481
83 Ga0307515_10022463 3300028794 Bacteria 11114
84 Ga0307515_10089131 3300028794 Bacteria 3889
85 Ga0307515_10130191 3300028794 Bacteria 2778
86 Ga0307515_10212453 3300028794 Bacteria 1775
87 Ga0265338_10007558 3300028800 Bacteria 13439
88 Ga0265338_10010439 3300028800 Bacteria 10888
89 Ga0265324_10000030 3300029957 Bacteria 126471
90 Ga0265330_10021069 3300031235 Bacteria 2978
91 Ga0265320_10026603 3300031240 Bacteria 3025
92 Ga0265325_10000278 3300031241 Bacteria 36118
93 Ga0265329_10005870 3300031242 Bacteria 4922
94 Ga0265331_10001126 3300031250 Bacteria 20450
95 Ga0265331_10005206 3300031250 Bacteria 7892
96 Ga0265316_10071271 3300031344 Bacteria 2679
97 Ga0307513_10047297 3300031456 Bacteria 4681
98 Ga0307509_10008863 3300031507 Bacteria 12693
99 Ga0307509_10037742 3300031507 Bacteria 5278
100 Ga0307509_10080437 3300031507 Bacteria 3370
101 Ga0307508_10000204 3300031616 Bacteria 71518
102 Ga0307508_10010764 3300031616 Bacteria 8363
103 Ga0307508_10039178 3300031616 Bacteria 4258
104 Ga0307514_10106529 3300031649 Bacteria 1999
105 Ga0316575_10003424 3300031665 Bacteria 5467
106 Ga0265314_10000586 3300031711 Bacteria 45773
107 Ga0265314_10041869 3300031711 Bacteria 3273
108 Ga0307507_10147295 3300033179 Bacteria 1784
109 Ga0307510_10017617 3300033180 Bacteria 8419
110 Ga0373931_0009529 3300035691 Bacteria 4643
111 Ga0395899_0028599 3300037312 Bacteria 4196
112 Ga0395899_0108682 3300037312 Unclassified 1996
113 Ga0395898_0000249 3300037466 Bacteria 134019
114 Ga0395898_0091581 3300037466 Bacteria 2925
115 Ga0436364_0325655 3300037853 Bacteria 2812
116 Ga0436364_0815863 3300037853 Bacteria 2539
117 Ga0395901_0005890 3300038443 Bacteria 12405
118 Ga0436365_0151477 3300039437 Bacteria 11768
119 Ga0436361_0145492 3300039447 Bacteria 3048
120 Ga0436361_0172527 3300039447 Bacteria 5955
121 Ga0436361_0419826 3300039447 Bacteria 59464
122 Ga0436361_0644926 3300039447 Bacteria 5700
123 Ga0436361_0953601 3300039447 Bacteria 68101
124 Ga0436361_0993359 3300039447 Bacteria 43823
125 Ga0436361_1124288 3300039447 Bacteria 24604
126 Ga0436361_1165468 3300039447 Bacteria 11800
127 Ga0451577_0168637 3300042876 Bacteria 1972
128 Ga0466969_0012568 3300044656 Bacteria 4461
129 Ga0453683_0015723 3300044673 Bacteria 4894
130 Ga0466966_0001099 3300044684 Bacteria 17319
131 Ga0466961_0006871 3300044693 Bacteria 7238
132 Ga0453684_0023770 3300044712 Bacteria 9002
133 Ga0466971_0023194 3300044719 Bacteria 2765
134 Ga0466970_0007774 3300044765 Bacteria 5378
135 Ga0466959_0001190 3300045049 Bacteria 15705
136 Ga0451576_0040158 3300045051 Bacteria 4954
137 Ga0466967_0061634 3300045976 Bacteria 3328
138 Ga0495617_000003 3300046452 Bacteria 541914
139 Ga0495617_000355 3300046452 Bacteria 25292
140 Ga0495627_000008 3300046453 Bacteria 572150
141 Ga0495627_011145 3300046453 Bacteria 3237
142 Ga0495592_0000295 3300046454 Bacteria 42617
143 Ga0495638_0052078 3300046460 Bacteria 2551
144 Ga0495653_0000002 3300046463 Bacteria 507262
145 Ga0495653_0000417 3300046463 Bacteria 34126
146 Ga0495650_0000072 3300046471 Bacteria 257886
147 Ga0495650_0000267 3300046471 Bacteria 100234
148 Ga0495650_0010030 3300046471 Bacteria 5328
149 Ga0495650_0013432 3300046471 Bacteria 4327
150 Ga0495585_0003697 3300046492 Bacteria 10222
151 Ga0495594_0010639 3300046499 Bacteria 4770
152 Ga0495583_0000017 3300046506 Bacteria 310888
153 Ga0495606_0000030 3300046507 Bacteria 249484
154 Ga0495606_0000104 3300046507 Bacteria 143973
155 Ga0495606_0000212 3300046507 Bacteria 103309
156 Ga0495606_0000344 3300046507 Bacteria 79864
157 Ga0495606_0001116 3300046507 Bacteria 38355
158 Ga0495606_0002697 3300046507 Bacteria 20059
159 Ga0495610_0000003 3300046512 Bacteria 1203910
160 Ga0495610_0002778 3300046512 Bacteria 14339
161 Ga0495610_0004231 3300046512 Bacteria 10694
162 Ga0495637_0000042 3300046520 Bacteria 114979
163 Ga0495637_0000980 3300046520 Bacteria 18107
164 Ga0495643_0000028 3300046522 Bacteria 262886
165 Ga0495648_0002159 3300046524 Bacteria 18532
166 Ga0495648_0013863 3300046524 Bacteria 5934
167 Ga0495666_0001035 3300046526 Bacteria 13192
168 Ga0495654_0000037 3300046530 Bacteria 188218
169 Ga0495654_0007289 3300046530 Bacteria 6193
170 Ga0495665_0001042 3300046531 Bacteria 14709
171 Ga0495586_0010390 3300046535 Bacteria 4949
172 Ga0495609_0001742 3300046538 Bacteria 14026
173 Ga0495597_0000323 3300046542 Bacteria 43285
174 Ga0495645_0103605 3300046543 Bacteria 2021
175 Ga0495633_0005020 3300046558 Bacteria 8249
176 Ga0495668_0000678 3300046616 Bacteria 41065
177 Ga0495668_0005565 3300046616 Bacteria 8476
178 Ga0495634_0058130 3300046642 Bacteria 2579
179 Ga0495625_0000697 3300046660 Bacteria 47751
180 Ga0495625_0041430 3300046660 Bacteria 3352
181 Ga0495625_0086734 3300046660 Bacteria 2171
182 Ga0495623_0000636 3300046679 Bacteria 23320
183 Ga0495671_0000010 3300046692 Bacteria 368641
184 Ga0495649_0000542 3300046694 Bacteria 31992
185 Ga0495660_0000118 3300046810 Bacteria 85202
186 Ga0495660_0000314 3300046810 Bacteria 43822
187 Ga0495660_0011237 3300046810 Bacteria 5197
188 Ga0495604_0002345 3300047317 Bacteria 15177
189 Ga0495604_0036823 3300047317 Bacteria 3856
190 Ga0495672_0000221 3300047320 Bacteria 81255
191 Ga0495683_0035076 3300047323 Bacteria 2550
192 Ga0495675_0001088 3300047444 Bacteria 16480
193 Ga0495673_0000003 3300047469 Bacteria 1491337
194 Ga0495673_0000016 3300047469 Bacteria 580643
195 Ga0495681_0004936 3300047470 Bacteria 9003
196 Ga0495686_0015029 3300047472 Bacteria 5305
197 Ga0496120_0049954 3300048923 Bacteria 2397
198 Ga0496123_0001782 3300048926 Bacteria 28366
199 Ga0496124_0108564 3300048927 Bacteria 2238
200 Ga0496126_0043256 3300048929 Bacteria 4155
201 Ga0495678_000029 3300049459 Bacteria 219803
202 Ga0495678_000032 3300049459 Bacteria 212537
203 Ga0501034_0025421 3300049571 Bacteria 6028
204 Ga0501037_0015787 3300049573 Bacteria 5557
205 Ga0500594_0003441 3300053118 Bacteria 3475
206 Ga0500594_0011749 3300053118 Bacteria 2049
207 Ga0500618_000672 3300053125 Bacteria 20111
208 Ga0500586_000999 3300053145 Bacteria 5842
209 Ga0500636_0001242 3300053177 Bacteria 13796
210 2524534059 2524023228 Bacteria 10118060
211 2723876085 2721755763 Bacteria 4464185
212 2728753070 2728368998 Bacteria 8720350
213 2738829842 2738541297 Bacteria 6549566
214 2739153638 2738541357 Bacteria 6549408
215 2739195558 2738543003 Bacteria 6549560
216 2739322034 2738543026 Bacteria 6549408
217 2739340275 2738543029 Bacteria 6549249
218 2745074750 2744054633 Bacteria 8678936
219 2793068936 2791355197 Bacteria 8420563
220 2821131793 2821131069 Bacteria 6108407
221 2842715473 2842711865 Bacteria 7155354
222 2846037213 2846033681 Bacteria 4377894
223 2846041376 2846037992 Bacteria 4526407
224 2857555967 2857553236 Bacteria 6166726
225 2857559179 2857558681 Bacteria 6617694
226 2857566991 2857564685 Bacteria 6290584
227 2885381416 2885374607 Bacteria 8927485
228 2885409630 2885409591 Bacteria 9235467
229 2903750206 2903748898 Bacteria 9972761
230 2904425760 2904424332 Bacteria 7633521
231 2904704054
232 2906617118
233 2908742263 2908739725 Bacteria 8628932
234 2919478292 2919476304 Bacteria 5888696
235 2922430729
236 3005480634 3005474847 Bacteria 9259049
237 8006940135 8006933436 Bacteria 10410654
238 8006979918 8006973647 Bacteria 10679141
239 8019556110 8019555841 Bacteria 9642137
240 8019569197 8019565922 Bacteria 9639779
241 Ga0436361_0375424
242 JGI25156J39149_1000286
243 JGI25154J39366_1000958
244 JGI25157J39369_1000107
245 rootH1_10020354
246 rootH2_10011138
247 rootL2_10000127
248 rootL2_10003661
249 rootH1_10003525
250 rootH1_10003526
251 Ga0055539_1000450
252 Ga0055539_1000526
253 Ga0055533_1000025
254 Ga0055525_1000692
255 Ga0055529_1000617
256 Ga0070658_10000986
257 Ga0068869_100060275
258 Ga0070660_100042047
259 Ga0070708_100055057
260 Ga0070698_100005075
261 Ga0070698_100129172
262 Ga0070699_100184427
263 Ga0070697_100002459
264 Ga0070697_100122681
265 Ga0070665_100004413
266 Ga0068855_100000456
267 Ga0068855_100033942
268 Ga0068855_100330960
269 Ga0068857_100012493
270 Ga0068854_100016227
271 Ga0068856_100001941
272 Ga0081540_1048955
273 Ga0105240_10000420
274 Ga0105240_10208343
275 Ga0105237_10054685
276 Ga0105237_10060184
277 Ga0105237_10075830
278 Ga0105239_10006833
279 Ga0157378_10243320
280 Ga0157375_10049846
281 Ga0182008_10056542
282 Ga0157376_10209670
283 Ga0182006_1000017
284 Ga0182007_10002735
285 Ga0182005_1000051
286 Ga0213872_10000001
287 Ga0213872_10000040
288 Ga0213872_10000744
289 Ga0213872_10014636
290 Ga0213872_10030877
291 Ga0213876_10023517
292 Ga0209674_100007
293 Ga0209563_100033
294 Ga0209258_100502
295 Ga0209646_1000160
296 Ga0209026_1000020
297 Ga0209026_1004878
298 Ga0209677_100015
299 Ga0209677_100290
300 Ga0209759_1000017
301 Ga0209233_1002966
302 Ga0209455_1000043
303 Ga0209564_1000011
304 Ga0209051_1000867
305 Ga0207705_10001052
306 Ga0207684_10088895
307 Ga0207654_10071217
308 Ga0207695_10007796
309 Ga0207695_10014692
310 Ga0207671_10012455
311 Ga0207657_10053366
312 Ga0207689_10027356
313 Ga0207667_10011148
314 Ga0207667_10011929
315 Ga0207702_10000486
316 Ga0207674_10009823
317 Ga0268266_10002983
318 Ga0265334_10013896
319 Ga0265318_10011916
320 Ga0265336_10011271
321 Ga0307517_10001421
322 Ga0307517_10062896
323 Ga0307515_10022463
324 Ga0307515_10089131
325 Ga0307515_10130191
326 Ga0307515_10212453
327 Ga0265338_10007558
328 Ga0265338_10010439
329 Ga0265324_10000030
330 Ga0265330_10021069
331 Ga0265320_10026603
332 Ga0265325_10000278
333 Ga0265329_10005870
334 Ga0265331_10001126
335 Ga0265331_10005206
336 Ga0265316_10071271
337 Ga0307513_10047297
338 Ga0307509_10008863
339 Ga0307509_10037742
340 Ga0307509_10080437
341 Ga0307508_10000204
342 Ga0307508_10010764
343 Ga0307508_10039178
344 Ga0307514_10106529
345 Ga0316575_10003424
346 Ga0265314_10000586
347 Ga0265314_10041869
348 Ga0307507_10147295
349 Ga0307510_10017617
350 Ga0373931_0009529
351 Ga0395899_0028599
352 Ga0395899_0108682
353 Ga0395898_0000249
354 Ga0395898_0091581
355 Ga0436364_0325655
356 Ga0436364_0815863
357 Ga0395901_0005890
358 Ga0436365_0151477
359 Ga0436361_0145492
360 Ga0436361_0172527
361 Ga0436361_0419826
362 Ga0436361_0644926
363 Ga0436361_0953601
364 Ga0436361_0993359
365 Ga0436361_1124288
366 Ga0436361_1165468
367 Ga0451577_0168637
368 Ga0466969_0012568
369 Ga0453683_0015723
370 Ga0466966_0001099
371 Ga0466961_0006871
372 Ga0453684_0023770
373 Ga0466971_0023194
374 Ga0466970_0007774
375 Ga0466959_0001190
376 Ga0451576_0040158
377 Ga0466967_0061634
378 Ga0495617_000003
379 Ga0495617_000355
380 Ga0495627_000008
381 Ga0495627_011145
382 Ga0495592_0000295
383 Ga0495638_0052078
384 Ga0495653_0000002
385 Ga0495653_0000417
386 Ga0495650_0000072
387 Ga0495650_0000267
388 Ga0495650_0010030
389 Ga0495650_0013432
390 Ga0495585_0003697
391 Ga0495594_0010639
392 Ga0495583_0000017
393 Ga0495606_0000030
394 Ga0495606_0000104
395 Ga0495606_0000212
396 Ga0495606_0000344
397 Ga0495606_0001116
398 Ga0495606_0002697
399 Ga0495610_0000003
400 Ga0495610_0002778
401 Ga0495610_0004231
402 Ga0495637_0000042
403 Ga0495637_0000980
404 Ga0495643_0000028
405 Ga0495648_0002159
406 Ga0495648_0013863
407 Ga0495666_0001035
408 Ga0495654_0000037
409 Ga0495654_0007289
410 Ga0495665_0001042
411 Ga0495586_0010390
412 Ga0495609_0001742
413 Ga0495597_0000323
414 Ga0495645_0103605
415 Ga0495633_0005020
416 Ga0495668_0000678
417 Ga0495668_0005565
418 Ga0495634_0058130
419 Ga0495625_0000697
420 Ga0495625_0041430
421 Ga0495625_0086734
422 Ga0495623_0000636
423 Ga0495671_0000010
424 Ga0495649_0000542
425 Ga0495660_0000118
426 Ga0495660_0000314
427 Ga0495660_0011237
428 Ga0495604_0002345
429 Ga0495604_0036823
430 Ga0495672_0000221
431 Ga0495683_0035076
432 Ga0495675_0001088
433 Ga0495673_0000003
434 Ga0495673_0000016
435 Ga0495681_0004936
436 Ga0495686_0015029
437 Ga0496120_0049954
438 Ga0496123_0001782
439 Ga0496124_0108564
440 Ga0496126_0043256
441 Ga0495678_000029
442 Ga0495678_000032
443 Ga0501034_0025421
444 Ga0501037_0015787
445 Ga0500594_0003441
446 Ga0500594_0011749
447 Ga0500618_000672
448 Ga0500586_000999
449 Ga0500636_0001242
450 2524534059
451 2723876085
452 2728753070
453 2738829842
454 2739153638
455 2739195558
456 2739322034
457 2739340275
458 2745074750
459 2793068936
460 2821131793
461 2842715473
462 2846037213
463 2846041376
464 2857555967
465 2857559179
466 2857566991
467 2885381416
468 2885409630
469 2903750206
470 2904425760
471 2904704054
472 2906617118
473 2908742263
474 2919478292
475 2922430729
476 3005480634
477 8006940135
478 8006979918
479 8019556110
480 8019569197

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02321

OEP

Outer membrane efflux protein

358

541

0.96

PF02321

OEP

Outer membrane efflux protein

141

332

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
1yc9-assembly1.cif.gz_A the crystal structure of the outer membrane protein vcec from the bacterial pathogen vibrio cholerae at 1.8 resolution 0.8315 77 450
5azp-assembly1.cif.gz_A crystal structure of a membrane protein from pseudomonas aeruginosa 0.798 27 450
3lsq-assembly1.cif.gz_B trypanosoma brucei seryl-trna synthetase 0.7862 197 278
4dk0-assembly1.cif.gz_A crystal structure of maca from actinobacillus actinomycetemcomitans 0.7832 193 278
1wp1-assembly1.cif.gz_A crystal structure of the drug-discharge outer membrane protein, oprm 0.7784 27 450
ID Description Score Start End Superfamily
3lsqA01 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Serine-tRNA synthetase, tRNA binding domain 0.9032 197 282 1.10.287.40
af_Q8I250_5_112_1.20.58.90 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1; 0.8853 200 278 1.20.58.90
1vf7L03 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Helix hairpin bin 0.8711 212 268 1.10.287.470
3fppA03 Special;Helix non-globular;Helix Hairpins; 0.8685 197 278 6.10.140.1990
1vf7C03 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Helix hairpin bin 0.8674 212 268 1.10.287.470
ID Description Score Start End GO Terms
AF-A0A1G6GBW2-F1-model_v4 Outer membrane efflux protein 0.884 86 282 GO:0009279
GO:0015288
GO:0015562
GO:1990281
AF-A0A7C9VPK2-F1-model_v4 Efflux transporter outer membrane subunit 0.8744 73 403 GO:0005886
GO:0015562
AF-A0A4P0V9T9-F1-model_v4 deleted 0.8666 86 389
AF-A0A127QIX5-F1-model_v4 Efflux transporter, outer membrane factor (OMF) lipo, NodT family protein 0.8562 30 458 GO:0005886
GO:0015562
AF-A0A2R7MZ29-F1-model_v4 deleted 0.8549 24 398

Map