F353121

General Info

Members Datasets Scaffolds Average Seq Length
240 121 478 436

Family's Representative Sequence

Representative Sequence 3300044712|Ga0453684_0132745|Ga0453684_0132745_371_1894
Length 490
Sequence MNLKDMQVSNIFLYLITQKFNLNLFNTIMKEKSGKNLNRRDFLGLSGIGLAGLTILPSYVINGVRIAPSDRVLMGTIGLGRQALSDFTGFAGVKGIQVIACCDVDTIKQLRYKRRVEEWQKSLGLAPRCDTYEQYEQLLERKDIDIVEVVSPDHWHALMTIHACQAGKDVYVQKPLSYTIKEALTMVRVANENKRVVQVGSQQRSSKEFQKAIELVQAGAIGHIEKIYAKVGDPPKPLDLPSQPIPANLNWNLWLGPLNDGKIMYNSDLAPQITLDPPQNETLWGAWRWYLETGNGYTADWGAHMFDIAQAAIGMDGSAPCEMIPKGYNGTQYMTFKYKNGIIMTEQPYLEDNPGAQGIKFIGTKGWIEVARGYIACSDQSLIPSEIAGNRPQARAAGAQDRPAPTAAGLRFEISSPHMQNFVDCVRSRQKPIASIEVGCSTAITCCLGNISNELQRPVKWDPATYTFVNDKEAENHRLMNYEYRRPYTL

Samples

Sample ID Description Type Environment
1 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
2 3300002077 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 Metagenome Rhizosphere
3 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
4 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
11 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
12 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
15 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
16 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
17 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
18 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
19 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
20 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
21 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
22 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
23 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
24 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
25 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
26 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
27 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
28 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
29 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
30 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
31 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
32 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
33 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
34 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
35 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
37 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
38 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
39 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
40 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
41 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
42 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
43 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
44 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
45 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
46 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
47 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
48 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
49 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
50 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
51 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
52 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
53 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
54 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
79 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
80 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
81 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
82 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
83 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
84 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
85 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
86 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
87 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
88 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
89 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
90 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
91 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
92 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
93 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
94 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
95 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
96 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
97 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
98 3300041456 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaG Metagenome Rhizoplane
99 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
100 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
101 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
102 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
103 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
104 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
105 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
106 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
107 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
108 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
109 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
110 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
111 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
112 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
113 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
115 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
116 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
117 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
118 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
119 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
120 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
121 2818991460 Chitinophaga polysaccharea 1209 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.58
Metatranscriptomes 0
Isolates 0.42

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.08
Nodule 0
Rhizoplane 0.42
Rhizosphere 92.08
Stem 0
Stem Tuber 0
Unclassified 3.33

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0453684_0132745 3300044712 Bacteria 2986
2 JGI24744J21845_10002917 3300002077 Bacteria 3496
3 rootH1_10021525 3300003316 Bacteria 7401
4 rootH1_10029892 3300003316 Bacteria 5437
5 rootH2_10005336 3300003320 Bacteria 90063
6 rootH2_10058605 3300003320 Bacteria 8831
7 Ga0070658_10000028 3300005327 Bacteria 157278
8 Ga0070676_10000004 3300005328 Bacteria 82919
9 Ga0068869_100004728 3300005334 Bacteria 8495
10 Ga0068869_100073346 3300005334 Unclassified 2538
11 Ga0070666_10000101 3300005335 Bacteria 58900
12 Ga0070680_100173064 3300005336 Bacteria 1817
13 Ga0068868_100027289 3300005338 Bacteria 4356
14 Ga0070660_100082007 3300005339 Bacteria 2532
15 Ga0070668_100082318 3300005347 Bacteria 2524
16 Ga0070671_100024271 3300005355 Bacteria 4964
17 Ga0070671_100076716 3300005355 Unclassified 2792
18 Ga0070662_100000014 3300005457 Bacteria 110124
19 Ga0068867_100000636 3300005459 Bacteria 23189
20 Ga0070685_10055067 3300005466 Bacteria 2310
21 Ga0070679_100090618 3300005530 Bacteria 3046
22 Ga0068853_100012464 3300005539 Bacteria 6918
23 Ga0068853_100050391 3300005539 Bacteria 3582
24 Ga0070665_100000006 3300005548 Bacteria 718034
25 Ga0070665_100000032 3300005548 Bacteria 333352
26 Ga0068855_100000658 3300005563 Bacteria 42234
27 Ga0068855_100031569 3300005563 Bacteria 6325
28 Ga0068856_100000005 3300005614 Bacteria 225505
29 Ga0068856_100034455 3300005614 Bacteria 4959
30 Ga0068852_100000568 3300005616 Bacteria 24343
31 Ga0068852_100011249 3300005616 Bacteria 6727
32 Ga0068859_100000007 3300005617 Bacteria 390070
33 Ga0068864_100006739 3300005618 Bacteria 9407
34 Ga0068861_100208742 3300005719 Unclassified 1644
35 Ga0068851_10005085 3300005834 Bacteria 5965
36 Ga0068851_10074325 3300005834 Bacteria 1764
37 Ga0068863_100013437 3300005841 Bacteria 7895
38 Ga0068863_100184952 3300005841 Bacteria 2001
39 Ga0068858_100004375 3300005842 Bacteria 13862
40 Ga0068860_100000005 3300005843 Bacteria 472349
41 Ga0068860_100001504 3300005843 Bacteria 25146
42 Ga0068871_100000294 3300006358 Bacteria 34890
43 Ga0075428_100028033 3300006844 Bacteria 6229
44 Ga0068865_100000045 3300006881 Bacteria 70227
45 Ga0068865_100116944 3300006881 Bacteria 1976
46 Ga0097620_100000007 3300006931 Bacteria 390070
47 Ga0105240_10020146 3300009093 Bacteria 8902
48 Ga0105240_10028526 3300009093 Bacteria 7290
49 Ga0111539_10015621 3300009094 Bacteria 9439
50 Ga0105245_10160205 3300009098 Bacteria 2135
51 Ga0105241_10000622 3300009174 Bacteria 26623
52 Ga0105241_10013673 3300009174 Bacteria 5947
53 Ga0105241_10015082 3300009174 Bacteria 5660
54 Ga0105242_10048994 3300009176 Bacteria 3436
55 Ga0105242_10053003 3300009176 Bacteria 3311
56 Ga0105237_10001595 3300009545 Bacteria 29470
57 Ga0105237_10001647 3300009545 Bacteria 28970
58 Ga0105237_10008501 3300009545 Bacteria 11105
59 Ga0105237_10093405 3300009545 Bacteria 2997
60 Ga0105238_10032710 3300009551 Bacteria 5293
61 Ga0105249_10015955 3300009553 Bacteria 6658
62 Ga0105249_10151480 3300009553 Bacteria 2233
63 Ga0105239_10095123 3300010375 Bacteria 3291
64 Ga0105239_10114362 3300010375 Unclassified 2993
65 Ga0105239_10282576 3300010375 Bacteria 1868
66 Ga0105246_10043795 3300011119 Bacteria 3038
67 Ga0157373_10015109 3300013100 Bacteria 5645
68 Ga0157374_10001268 3300013296 Bacteria 21543
69 Ga0157374_10006814 3300013296 Bacteria 9719
70 Ga0157374_10055335 3300013296 Bacteria 3702
71 Ga0157374_10259919 3300013296 Bacteria 1710
72 Ga0157378_10009825 3300013297 Bacteria 8342
73 Ga0157378_10030996 3300013297 Bacteria 4722
74 Ga0157378_10031096 3300013297 Bacteria 4714
75 Ga0157378_10056529 3300013297 Bacteria 3497
76 Ga0163162_10000010 3300013306 Bacteria 302032
77 Ga0163162_10000854 3300013306 Bacteria 28384
78 Ga0163162_10010157 3300013306 Bacteria 9146
79 Ga0157375_10028355 3300013308 Bacteria 5247
80 Ga0157375_10081975 3300013308 Bacteria 3267
81 Ga0163163_10048652 3300014325 Bacteria 4170
82 Ga0157380_10005499 3300014326 Bacteria 8855
83 Ga0157376_10000780 3300014969 Bacteria 20811
84 Ga0213872_10011316 3300021361 Bacteria 4224
85 Ga0213876_10019581 3300021384 Bacteria 3575
86 Ga0207680_10001183 3300025903 Bacteria 12328
87 Ga0207647_10000022 3300025904 Bacteria 118094
88 Ga0207645_10000908 3300025907 Bacteria 24560
89 Ga0207705_10000045 3300025909 Bacteria 180625
90 Ga0207654_10017736 3300025911 Bacteria 3726
91 Ga0207654_10020974 3300025911 Bacteria 3470
92 Ga0207654_10032355 3300025911 Bacteria 2889
93 Ga0207695_10014368 3300025913 Bacteria 9387
94 Ga0207695_10028782 3300025913 Bacteria 6152
95 Ga0207671_10001648 3300025914 Bacteria 25416
96 Ga0207671_10001869 3300025914 Bacteria 23423
97 Ga0207671_10034047 3300025914 Bacteria 3787
98 Ga0207657_10011125 3300025919 Bacteria 8944
99 Ga0207650_10073312 3300025925 Bacteria 2578
100 Ga0207706_10000047 3300025933 Bacteria 119022
101 Ga0207704_10000077 3300025938 Bacteria 60841
102 Ga0207704_10017026 3300025938 Bacteria 3756
103 Ga0207689_10003450 3300025942 Bacteria 14436
104 Ga0207689_10020783 3300025942 Bacteria 5521
105 Ga0207667_10001998 3300025949 Bacteria 25593
106 Ga0207667_10078008 3300025949 Bacteria 3434
107 Ga0207667_10081290 3300025949 Bacteria 3357
108 Ga0207712_10014695 3300025961 Bacteria 5042
109 Ga0207703_10000798 3300026035 Bacteria 31051
110 Ga0207639_10004256 3300026041 Bacteria 9651
111 Ga0207702_10001544 3300026078 Bacteria 22767
112 Ga0207702_10094792 3300026078 Bacteria 2621
113 Ga0207641_10000056 3300026088 Bacteria 170719
114 Ga0207641_10006998 3300026088 Bacteria 9435
115 Ga0207648_10001095 3300026089 Bacteria 30359
116 Ga0207648_10175446 3300026089 Bacteria 1895
117 Ga0207676_10005956 3300026095 Bacteria 8600
118 Ga0207675_100164129 3300026118 Bacteria 2120
119 Ga0207698_10117071 3300026142 Bacteria 2247
120 Ga0268266_10000010 3300028379 Bacteria 1030233
121 Ga0268266_10000030 3300028379 Bacteria 417120
122 Ga0268264_10000012 3300028381 Bacteria 521740
123 Ga0268264_10002267 3300028381 Bacteria 17033
124 Ga0307517_10002681 3300028786 Bacteria 28427
125 Ga0307515_10000078 3300028794 Bacteria 227988
126 Ga0265338_10021706 3300028800 Bacteria 6681
127 Ga0265327_10023693 3300031251 Bacteria 3628
128 Ga0265316_10022275 3300031344 Bacteria 5346
129 Ga0307513_10154949 3300031456 Unclassified 2193
130 Ga0307509_10047557 3300031507 Bacteria 4614
131 Ga0307508_10019521 3300031616 Bacteria 6161
132 Ga0316576_10025419 3300031727 Unclassified 4146
133 Ga0316576_10074790 3300031727 Bacteria 2505
134 Ga0316577_10011256 3300031733 Bacteria 4846
135 Ga0316585_10021577 3300032137 Bacteria 1978
136 Ga0307510_10000464 3300033180 Bacteria 39482
137 Ga0316584_0111165 3300036712 Bacteria 2050
138 Ga0316584_0184074 3300036712 Unclassified 1546
139 Ga0395899_0003371 3300037312 Bacteria 12676
140 Ga0395900_0000406 3300037418 Bacteria 62078
141 Ga0395898_0047397 3300037466 Bacteria 4217
142 Ga0395905_0000175 3300037471 Bacteria 104024
143 Ga0395901_0000313 3300038443 Bacteria 59766
144 Ga0436365_1879596 3300039437 Bacteria 24111
145 Ga0436361_0793109 3300039447 Bacteria 21720
146 Ga0451795_1673722 3300041456 Bacteria 2221
147 Ga0439448_0002964 3300042005 Bacteria 4655
148 Ga0451577_0000010 3300042876 Bacteria 616686
149 Ga0451577_0000022 3300042876 Bacteria 437063
150 Ga0451577_0002361 3300042876 Bacteria 22704
151 Ga0451577_0003740 3300042876 Bacteria 16595
152 Ga0451577_0004086 3300042876 Bacteria 15684
153 Ga0451577_0011581 3300042876 Bacteria 8335
154 Ga0451577_0014243 3300042876 Bacteria 7413
155 Ga0451577_0022408 3300042876 Bacteria 5767
156 Ga0451577_0032849 3300042876 Bacteria 4678
157 Ga0451577_0053392 3300042876 Bacteria 3607
158 Ga0451577_0066149 3300042876 Bacteria 3224
159 Ga0451577_0084038 3300042876 Bacteria 2840
160 Ga0451577_0150773 3300042876 Bacteria 2092
161 Ga0451577_0156686 3300042876 Bacteria 2050
162 Ga0451577_0158294 3300042876 Bacteria 2039
163 Ga0466972_0000006 3300044658 Bacteria 282264
164 Ga0453683_0000005 3300044673 Bacteria 741657
165 Ga0453683_0000065 3300044673 Bacteria 166630
166 Ga0453683_0000161 3300044673 Bacteria 98122
167 Ga0453683_0000397 3300044673 Bacteria 51516
168 Ga0453683_0000637 3300044673 Bacteria 38080
169 Ga0453683_0001967 3300044673 Bacteria 16650
170 Ga0453683_0014883 3300044673 Bacteria 5050
171 Ga0453683_0026025 3300044673 Bacteria 3715
172 Ga0453683_0026659 3300044673 Bacteria 3668
173 Ga0453683_0042524 3300044673 Bacteria 2852
174 Ga0453683_0057031 3300044673 Bacteria 2444
175 Ga0453683_0084110 3300044673 Bacteria 1994
176 Ga0453684_0000086 3300044712 Bacteria 397278
177 Ga0453684_0000130 3300044712 Bacteria 331761
178 Ga0453684_0000139 3300044712 Bacteria 320330
179 Ga0453684_0000256 3300044712 Bacteria 228862
180 Ga0453684_0000501 3300044712 Bacteria 153475
181 Ga0453684_0000648 3300044712 Bacteria 125276
182 Ga0453684_0001006 3300044712 Bacteria 91343
183 Ga0453684_0002537 3300044712 Bacteria 43991
184 Ga0453684_0004158 3300044712 Bacteria 31318
185 Ga0453684_0018376 3300044712 Bacteria 10732
186 Ga0453684_0018553 3300044712 Bacteria 10666
187 Ga0453684_0021014 3300044712 Bacteria 9788
188 Ga0453684_0021433 3300044712 Bacteria 9655
189 Ga0453684_0026706 3300044712 Bacteria 8322
190 Ga0453684_0029058 3300044712 Bacteria 7865
191 Ga0453684_0036261 3300044712 Bacteria 6798
192 Ga0453684_0036608 3300044712 Bacteria 6760
193 Ga0453684_0054318 3300044712 Bacteria 5218
194 Ga0453684_0057407 3300044712 Bacteria 5038
195 Ga0453684_0071125 3300044712 Bacteria 4401
196 Ga0453684_0073775 3300044712 Unclassified 4300
197 Ga0453684_0088890 3300044712 Bacteria 3823
198 Ga0453684_0095663 3300044712 Bacteria 3650
199 Ga0453684_0102491 3300044712 Bacteria 3499
200 Ga0453684_0138179 3300044712 Bacteria 2914
201 Ga0453684_0147640 3300044712 Bacteria 2799
202 Ga0453684_0202888 3300044712 Bacteria 2310
203 Ga0453684_0210536 3300044712 Bacteria 2260
204 Ga0453684_0255646 3300044712 Bacteria 2009
205 Ga0466970_0014724 3300044765 Bacteria 4018
206 Ga0451576_0000044 3300045051 Bacteria 334467
207 Ga0451576_0000083 3300045051 Bacteria 236908
208 Ga0451576_0000180 3300045051 Bacteria 159491
209 Ga0451576_0000332 3300045051 Bacteria 114268
210 Ga0451576_0000395 3300045051 Bacteria 101608
211 Ga0451576_0000957 3300045051 Bacteria 54079
212 Ga0451576_0001597 3300045051 Bacteria 38095
213 Ga0451576_0007410 3300045051 Bacteria 13127
214 Ga0451576_0013006 3300045051 Bacteria 9322
215 Ga0451576_0068761 3300045051 Bacteria 3685
216 Ga0451576_0069170 3300045051 Bacteria 3673
217 Ga0451576_0134418 3300045051 Bacteria 2579
218 Ga0451576_0141187 3300045051 Bacteria 2511
219 Ga0451576_0163321 3300045051 Bacteria 2324
220 Ga0451576_0224212 3300045051 Bacteria 1963
221 Ga0451576_0242986 3300045051 Bacteria 1881
222 Ga0495638_0099815 3300046460 Bacteria 1737
223 Ga0495648_0001260 3300046524 Bacteria 25264
224 Ga0495668_0003393 3300046616 Bacteria 11979
225 Ga0495625_0066458 3300046660 Bacteria 2540
226 Ga0495649_0040173 3300046694 Bacteria 2563
227 Ga0495683_0005192 3300047323 Bacteria 7254
228 Ga0495687_000009 3300047443 Bacteria 419317
229 Ga0495686_0000083 3300047472 Bacteria 198933
230 Ga0501034_0100771 3300049571 Bacteria 2882
231 Ga0501044_0014915 3300049823 Bacteria 8378
232 Ga0501044_0016286 3300049823 Bacteria 7988
233 nmdc:mga08y16_260274_c1 3300050511 Bacteria 1792
234 Ga0500635_0015647 3300053080 Bacteria 2244
235 Ga0500578_0161900 3300053086 Bacteria 1388
236 Ga0500583_0000633 3300053092 Bacteria 10450
237 Ga0500608_057013 3300053122 Bacteria 1871
238 Ga0500568_0015297 3300053139 Bacteria 3437
239 2819681482 2818991460 Bacteria 7595395
240 Ga0453684_0132745
241 JGI24744J21845_10002917
242 rootH1_10021525
243 rootH1_10029892
244 rootH2_10005336
245 rootH2_10058605
246 Ga0070658_10000028
247 Ga0070676_10000004
248 Ga0068869_100004728
249 Ga0068869_100073346
250 Ga0070666_10000101
251 Ga0070680_100173064
252 Ga0068868_100027289
253 Ga0070660_100082007
254 Ga0070668_100082318
255 Ga0070671_100024271
256 Ga0070671_100076716
257 Ga0070662_100000014
258 Ga0068867_100000636
259 Ga0070685_10055067
260 Ga0070679_100090618
261 Ga0068853_100012464
262 Ga0068853_100050391
263 Ga0070665_100000006
264 Ga0070665_100000032
265 Ga0068855_100000658
266 Ga0068855_100031569
267 Ga0068856_100000005
268 Ga0068856_100034455
269 Ga0068852_100000568
270 Ga0068852_100011249
271 Ga0068859_100000007
272 Ga0068864_100006739
273 Ga0068861_100208742
274 Ga0068851_10005085
275 Ga0068851_10074325
276 Ga0068863_100013437
277 Ga0068863_100184952
278 Ga0068858_100004375
279 Ga0068860_100000005
280 Ga0068860_100001504
281 Ga0068871_100000294
282 Ga0075428_100028033
283 Ga0068865_100000045
284 Ga0068865_100116944
285 Ga0097620_100000007
286 Ga0105240_10020146
287 Ga0105240_10028526
288 Ga0111539_10015621
289 Ga0105245_10160205
290 Ga0105241_10000622
291 Ga0105241_10013673
292 Ga0105241_10015082
293 Ga0105242_10048994
294 Ga0105242_10053003
295 Ga0105237_10001595
296 Ga0105237_10001647
297 Ga0105237_10008501
298 Ga0105237_10093405
299 Ga0105238_10032710
300 Ga0105249_10015955
301 Ga0105249_10151480
302 Ga0105239_10095123
303 Ga0105239_10114362
304 Ga0105239_10282576
305 Ga0105246_10043795
306 Ga0157373_10015109
307 Ga0157374_10001268
308 Ga0157374_10006814
309 Ga0157374_10055335
310 Ga0157374_10259919
311 Ga0157378_10009825
312 Ga0157378_10030996
313 Ga0157378_10031096
314 Ga0157378_10056529
315 Ga0163162_10000010
316 Ga0163162_10000854
317 Ga0163162_10010157
318 Ga0157375_10028355
319 Ga0157375_10081975
320 Ga0163163_10048652
321 Ga0157380_10005499
322 Ga0157376_10000780
323 Ga0213872_10011316
324 Ga0213876_10019581
325 Ga0207680_10001183
326 Ga0207647_10000022
327 Ga0207645_10000908
328 Ga0207705_10000045
329 Ga0207654_10017736
330 Ga0207654_10020974
331 Ga0207654_10032355
332 Ga0207695_10014368
333 Ga0207695_10028782
334 Ga0207671_10001648
335 Ga0207671_10001869
336 Ga0207671_10034047
337 Ga0207657_10011125
338 Ga0207650_10073312
339 Ga0207706_10000047
340 Ga0207704_10000077
341 Ga0207704_10017026
342 Ga0207689_10003450
343 Ga0207689_10020783
344 Ga0207667_10001998
345 Ga0207667_10078008
346 Ga0207667_10081290
347 Ga0207712_10014695
348 Ga0207703_10000798
349 Ga0207639_10004256
350 Ga0207702_10001544
351 Ga0207702_10094792
352 Ga0207641_10000056
353 Ga0207641_10006998
354 Ga0207648_10001095
355 Ga0207648_10175446
356 Ga0207676_10005956
357 Ga0207675_100164129
358 Ga0207698_10117071
359 Ga0268266_10000010
360 Ga0268266_10000030
361 Ga0268264_10000012
362 Ga0268264_10002267
363 Ga0307517_10002681
364 Ga0307515_10000078
365 Ga0265338_10021706
366 Ga0265327_10023693
367 Ga0265316_10022275
368 Ga0307513_10154949
369 Ga0307509_10047557
370 Ga0307508_10019521
371 Ga0316576_10025419
372 Ga0316576_10074790
373 Ga0316577_10011256
374 Ga0316585_10021577
375 Ga0307510_10000464
376 Ga0316584_0111165
377 Ga0316584_0184074
378 Ga0395899_0003371
379 Ga0395900_0000406
380 Ga0395898_0047397
381 Ga0395905_0000175
382 Ga0395901_0000313
383 Ga0436365_1879596
384 Ga0436361_0793109
385 Ga0451795_1673722
386 Ga0439448_0002964
387 Ga0451577_0000010
388 Ga0451577_0000022
389 Ga0451577_0002361
390 Ga0451577_0003740
391 Ga0451577_0004086
392 Ga0451577_0011581
393 Ga0451577_0014243
394 Ga0451577_0022408
395 Ga0451577_0032849
396 Ga0451577_0053392
397 Ga0451577_0066149
398 Ga0451577_0084038
399 Ga0451577_0150773
400 Ga0451577_0156686
401 Ga0451577_0158294
402 Ga0466972_0000006
403 Ga0453683_0000005
404 Ga0453683_0000065
405 Ga0453683_0000161
406 Ga0453683_0000397
407 Ga0453683_0000637
408 Ga0453683_0001967
409 Ga0453683_0014883
410 Ga0453683_0026025
411 Ga0453683_0026659
412 Ga0453683_0042524
413 Ga0453683_0057031
414 Ga0453683_0084110
415 Ga0453684_0000086
416 Ga0453684_0000130
417 Ga0453684_0000139
418 Ga0453684_0000256
419 Ga0453684_0000501
420 Ga0453684_0000648
421 Ga0453684_0001006
422 Ga0453684_0002537
423 Ga0453684_0004158
424 Ga0453684_0018376
425 Ga0453684_0018553
426 Ga0453684_0021014
427 Ga0453684_0021433
428 Ga0453684_0026706
429 Ga0453684_0029058
430 Ga0453684_0036261
431 Ga0453684_0036608
432 Ga0453684_0054318
433 Ga0453684_0057407
434 Ga0453684_0071125
435 Ga0453684_0073775
436 Ga0453684_0088890
437 Ga0453684_0095663
438 Ga0453684_0102491
439 Ga0453684_0138179
440 Ga0453684_0147640
441 Ga0453684_0202888
442 Ga0453684_0210536
443 Ga0453684_0255646
444 Ga0466970_0014724
445 Ga0451576_0000044
446 Ga0451576_0000083
447 Ga0451576_0000180
448 Ga0451576_0000332
449 Ga0451576_0000395
450 Ga0451576_0000957
451 Ga0451576_0001597
452 Ga0451576_0007410
453 Ga0451576_0013006
454 Ga0451576_0068761
455 Ga0451576_0069170
456 Ga0451576_0134418
457 Ga0451576_0141187
458 Ga0451576_0163321
459 Ga0451576_0224212
460 Ga0451576_0242986
461 Ga0495638_0099815
462 Ga0495648_0001260
463 Ga0495668_0003393
464 Ga0495625_0066458
465 Ga0495649_0040173
466 Ga0495683_0005192
467 Ga0495687_000009
468 Ga0495686_0000083
469 Ga0501034_0100771
470 Ga0501044_0014915
471 Ga0501044_0016286
472 nmdc:mga08y16_260274_c1
473 Ga0500635_0015647
474 Ga0500578_0161900
475 Ga0500583_0000633
476 Ga0500608_057013
477 Ga0500568_0015297
478 2819681482

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF19051

GFO_IDH_MocA_C2

Oxidoreductase family, C-terminal alpha/beta domain

409

490

0.91

PF01408

GFO_IDH_MocA

Oxidoreductase family, NAD-binding Rossmann fold

74

201

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
3q2k-assembly2.cif.gz_P crystal structure of the wlba dehydrogenase from bordetella pertussis in complex with nadh and udp-glcnaca 0.7991 45 406
1x7d-assembly1.cif.gz_B crystal structure analysis of ornithine cyclodeaminase complexed with nad and ornithine to 1.6 angstroms 0.7938 44 127
3q2k-assembly1.cif.gz_E crystal structure of the wlba dehydrogenase from bordetella pertussis in complex with nadh and udp-glcnaca 0.7883 45 406
3q2k-assembly2.cif.gz_P crystal structure of the wlba dehydrogenase from bordetella pertussis in complex with nadh and udp-glcnaca 0.7849 45 406
3q2k-assembly1.cif.gz_E crystal structure of the wlba dehydrogenase from bordetella pertussis in complex with nadh and udp-glcnaca 0.7745 45 406
ID Description Score Start End Superfamily
4hktB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9551 46 177 3.40.50.720
af_P39353_1_125_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9499 45 184 3.40.50.720
3moiA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9431 45 177 3.40.50.720
4hktB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9394 46 177 3.40.50.720
af_P39353_1_125_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9354 45 184 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A836SQT7-F1-model_v4 Gfo/Idh/MocA family oxidoreductase 0.9593 41 200 GO:0000166
AF-A0A536UNG7-F1-model_v4 Gfo/Idh/MocA family oxidoreductase 0.9566 45 177 GO:0000166
AF-A0A7C1YPV6-F1-model_v4 Gfo/Idh/MocA family oxidoreductase 0.9499 44 184 GO:0000166
AF-A0A151BEY2-F1-model_v4 Gfo/Idh/MocA-like oxidoreductase N-terminal domain-containing protein 0.9448 44 199 GO:0000166
AF-A0A455UKN8-F1-model_v4 Gfo/Idh/MocA-like oxidoreductase N-terminal domain-containing protein 0.943 41 184 GO:0000166

Map