F353256

General Info

Members Datasets Scaffolds Average Seq Length
240 172 480 322

Family's Representative Sequence

Representative Sequence 3300049572|Ga0501036_0228145|Ga0501036_0228145_113_1255
Length 380
Sequence MKTGASRRAPAVLGSKIKIAPGRNAQIRTAFRLRPIQRRHPAENRVESRARAAYAGRMKVFVTGGAGYIGSVCVEELLNKGHAVTVYDDLSEGHRSAVDPRAAFIHARPNEAGNIAAAVGSVRPDAILHFAAYALVGESMTNPGKYFRNNVYNALQLADAAVEFGVKKFVFSSTCATYGPPDRVPMTEDVPQRPINPYGESKLMFEKILLWYQQIHRLEFIAFRYFNAAGASETFGEHHRIETHLIPNVLKVALGQAKQCEIYGTDYPTPDGTCIRDYIHVRDLAQAHILGLAPGKTGFFNLGNGDGYSVRQVIQTCEKITGQPIPAVEKPRRPGDPPRLVASATKAFTELGWKPQFPKIEDIIATAWAWHVKHPNGYPD

Samples

Sample ID Description Type Environment
1 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
2 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
8 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
9 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
10 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
11 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
12 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
13 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
14 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
15 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
18 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
19 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
20 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
21 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
22 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
23 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
24 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
25 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
26 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
27 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
28 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
29 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
30 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
31 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
32 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
33 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
34 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
35 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
36 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
37 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
38 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
39 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
40 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
41 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
42 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
44 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
45 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
46 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
47 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
48 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
49 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
50 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
51 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
52 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
53 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
54 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
55 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
56 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
57 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
58 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
87 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
88 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
89 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
90 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
91 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
92 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
93 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
94 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
95 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
96 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
97 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
98 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
99 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
100 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
101 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
102 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
103 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
104 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
105 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
106 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
107 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
108 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
109 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
110 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
111 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
112 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
113 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
114 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
115 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
116 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
117 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
118 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
119 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
120 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
121 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
122 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
123 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
124 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
125 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
126 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
127 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
128 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
129 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
130 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
131 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
132 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
133 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
134 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
135 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
136 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
137 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
138 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
139 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
140 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
143 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
145 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
146 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
147 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
148 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
149 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
151 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
152 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
153 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
154 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
155 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
156 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
157 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
158 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
159 2600255229 Lactobacillus acidophilus A 16 Isolate Rhizosphere
160 2671180330 Peribacillus simplex SH-B26 Isolate Unclassified
161 2687453341 Pirellula sp. SH-Sr6A Isolate Unclassified
162 2786546517 Verrucomicrobia bacterium LW23 Isolate Rhizoplane
163 2816332139 Pseudonocardia kunmingensis DSM 45301 Isolate Unclassified
164 2816332186 Peribacillus frigoritolerans 3612 Isolate Unclassified
165 2818991441 Niallia circulans 3243 Isolate Rhizosphere
166 2842682962 Bacillus sp. R-72492 Isolate Unclassified
167 2849139964 Bacillus sp. R-71875 Isolate Unclassified
168 2857581216 Bacillus sp. R-71922 Isolate Unclassified
169 2899359706 Amycolatopsis anabasis EGI 650086 Isolate Unclassified
170 2936361878 Neobacillus endophyticus BRMEA1 Isolate Unclassified
171 2977254563 Bacillus sp. SORGH_AS 510 Isolate Unclassified
172 2990275345 Bacillus sp. SLBN-46 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 94.17
Metatranscriptomes 0
Isolates 5.83

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.83
Nodule 0
Rhizoplane 3.33
Rhizosphere 91.25
Stem 0
Stem Tuber 0
Unclassified 1.25

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501036_0228145 3300049572 Bacteria 1563
2 LJQas_1010650 3300000549 Bacteria 1099
3 Ga0065715_10000562 3300005293 Bacteria 10422
4 Ga0065707_10083410 3300005295 Bacteria 9288
5 Ga0070683_100098598 3300005329 Bacteria 2750
6 Ga0070683_100313036 3300005329 Bacteria 1494
7 Ga0068869_100089793 3300005334 Bacteria 2308
8 Ga0070661_100045523 3300005344 Bacteria 3208
9 Ga0070675_100297757 3300005354 Bacteria 1421
10 Ga0070688_100160828 3300005365 Bacteria 1543
11 Ga0070688_100228799 3300005365 Bacteria 1314
12 Ga0070659_100176009 3300005366 Bacteria 1754
13 Ga0070713_100047421 3300005436 Bacteria 3531
14 Ga0070713_100496991 3300005436 Bacteria 1150
15 Ga0070701_10127867 3300005438 Bacteria 1440
16 Ga0070663_100034671 3300005455 Bacteria 3496
17 Ga0070663_100094264 3300005455 Bacteria 2223
18 Ga0070663_100134772 3300005455 Bacteria 1879
19 Ga0070678_100057959 3300005456 Bacteria 2840
20 Ga0070678_100090283 3300005456 Bacteria 2348
21 Ga0070662_100000270 3300005457 Bacteria 30535
22 Ga0070681_10299917 3300005458 Bacteria 1517
23 Ga0068867_100062552 3300005459 Bacteria 2766
24 Ga0070685_10083173 3300005466 Bacteria 1923
25 Ga0070698_100502770 3300005471 Unclassified 1150
26 Ga0070697_100077665 3300005536 Bacteria 2732
27 Ga0070686_100000009 3300005544 Bacteria 202453
28 Ga0070686_100182024 3300005544 Bacteria 1494
29 Ga0070695_100009426 3300005545 Bacteria 5812
30 Ga0070665_100000297 3300005548 Bacteria 77862
31 Ga0070665_100101308 3300005548 Bacteria 2884
32 Ga0068855_100083140 3300005563 Bacteria 3709
33 Ga0068855_100128311 3300005563 Bacteria 2898
34 Ga0068857_100262069 3300005577 Bacteria 1587
35 Ga0068854_100060081 3300005578 Bacteria 2748
36 Ga0068856_100002261 3300005614 Bacteria 19892
37 Ga0068856_100002931 3300005614 Bacteria 17473
38 Ga0068859_100005660 3300005617 Bacteria 12722
39 Ga0068864_100152193 3300005618 Bacteria 2096
40 Ga0068864_100310137 3300005618 Bacteria 1479
41 Ga0068861_100020013 3300005719 Bacteria 4787
42 Ga0068851_10039232 3300005834 Bacteria 2378
43 Ga0068863_100042919 3300005841 Bacteria 4295
44 Ga0068858_100226216 3300005842 Bacteria 1773
45 Ga0068862_100048762 3300005844 Bacteria 3616
46 Ga0068862_100495913 3300005844 Bacteria 1158
47 Ga0081455_10000093 3300005937 Bacteria 97067
48 Ga0075428_100014367 3300006844 Bacteria 8800
49 Ga0075431_100152364 3300006847 Bacteria 2380
50 Ga0075434_100564254 3300006871 Bacteria 1158
51 Ga0068865_100334188 3300006881 Bacteria 1223
52 Ga0097620_100005659 3300006931 Bacteria 12722
53 Ga0105240_10045720 3300009093 Bacteria 5553
54 Ga0105240_10046763 3300009093 Bacteria 5480
55 Ga0105240_10202068 3300009093 Bacteria 2328
56 Ga0111539_10065354 3300009094 Bacteria 4298
57 Ga0105245_10403426 3300009098 Bacteria 1367
58 Ga0105247_10078561 3300009101 Bacteria 2076
59 Ga0105243_10096538 3300009148 Bacteria 2445
60 Ga0105238_10053381 3300009551 Bacteria 4061
61 Ga0105249_10013650 3300009553 Bacteria 7173
62 Ga0105239_10048680 3300010375 Bacteria 4648
63 Ga0157374_10191947 3300013296 Unclassified 1998
64 Ga0157378_10211532 3300013297 Bacteria 1839
65 Ga0157372_10048363 3300013307 Bacteria 4728
66 Ga0157372_10343512 3300013307 Bacteria 1739
67 Ga0157372_10902682 3300013307 Bacteria 1025
68 Ga0157375_10306043 3300013308 Bacteria 1753
69 Ga0157375_10347372 3300013308 Bacteria 1649
70 Ga0157375_10684320 3300013308 Bacteria 1180
71 Ga0163163_10017122 3300014325 Bacteria 6751
72 Ga0163163_10160136 3300014325 Bacteria 2296
73 Ga0157380_10126685 3300014326 Bacteria 2171
74 Ga0157379_10154165 3300014968 Bacteria 2072
75 Ga0157379_10291149 3300014968 Bacteria 1487
76 Ga0157376_10051776 3300014969 Bacteria 3411
77 Ga0163161_10122729 3300017792 Bacteria 1953
78 Ga0207642_10082498 3300025899 Bacteria 1565
79 Ga0207710_10079069 3300025900 Bacteria 1522
80 Ga0207688_10027056 3300025901 Bacteria 3155
81 Ga0207643_10012711 3300025908 Bacteria 4551
82 Ga0207707_10324618 3300025912 Bacteria 1328
83 Ga0207695_10089157 3300025913 Bacteria 3102
84 Ga0207695_10132747 3300025913 Bacteria 2446
85 Ga0207695_10143071 3300025913 Bacteria 2338
86 Ga0207663_10015996 3300025916 Bacteria 4151
87 Ga0207657_10152852 3300025919 Bacteria 1879
88 Ga0207681_10115483 3300025923 Bacteria 1960
89 Ga0207694_10014530 3300025924 Bacteria 5937
90 Ga0207659_10373148 3300025926 Bacteria 1188
91 Ga0207690_10005260 3300025932 Bacteria 7627
92 Ga0207706_10000905 3300025933 Bacteria 30498
93 Ga0207706_10170333 3300025933 Bacteria 1913
94 Ga0207669_10363803 3300025937 Bacteria 1122
95 Ga0207691_10148908 3300025940 Bacteria 2059
96 Ga0207661_10201941 3300025944 Bacteria 1748
97 Ga0207667_10101385 3300025949 Bacteria 2969
98 Ga0207667_10459197 3300025949 Bacteria 1294
99 Ga0207651_10448393 3300025960 Bacteria 1107
100 Ga0207668_10187195 3300025972 Bacteria 1638
101 Ga0207703_10194649 3300026035 Bacteria 1798
102 Ga0207639_10306115 3300026041 Bacteria 1406
103 Ga0207678_10013784 3300026067 Bacteria 7103
104 Ga0207678_10025378 3300026067 Bacteria 5174
105 Ga0207678_10039942 3300026067 Bacteria 4070
106 Ga0207708_10117415 3300026075 Bacteria 2070
107 Ga0207702_10001253 3300026078 Bacteria 25614
108 Ga0207702_10004844 3300026078 Bacteria 11853
109 Ga0207674_10153079 3300026116 Bacteria 2262
110 Ga0207675_100003979 3300026118 Bacteria 14333
111 Ga0207683_10092938 3300026121 Bacteria 2688
112 Ga0268266_10161122 3300028379 Bacteria 2030
113 Ga0265337_1000219 3300028556 Bacteria 30526
114 Ga0265337_1000536 3300028556 Bacteria 20216
115 Ga0265337_1010331 3300028556 Bacteria 3276
116 Ga0265337_1024108 3300028556 Bacteria 1865
117 Ga0265337_1031990 3300028556 Bacteria 1559
118 Ga0265326_10019891 3300028558 Bacteria 1927
119 Ga0265319_1000001 3300028563 Bacteria 549513
120 Ga0265319_1026315 3300028563 Bacteria 2075
121 Ga0265334_10006900 3300028573 Bacteria 4876
122 Ga0265323_10008023 3300028653 Bacteria 4366
123 Ga0265336_10000792 3300028666 Bacteria 16710
124 Ga0265338_10002692 3300028800 Bacteria 26111
125 Ga0265338_10005518 3300028800 Bacteria 16487
126 Ga0265338_10045827 3300028800 Bacteria 4016
127 Ga0265338_10068834 3300028800 Bacteria 3046
128 Ga0265338_10088514 3300028800 Bacteria 2569
129 Ga0265338_10093502 3300028800 Bacteria 2477
130 Ga0265338_10258987 3300028800 Bacteria 1280
131 Ga0265324_10000808 3300029957 Bacteria 20387
132 Ga0265324_10014156 3300029957 Bacteria 2958
133 Ga0265324_10044820 3300029957 Bacteria 1524
134 Ga0265332_10036453 3300031238 Bacteria 2135
135 Ga0265320_10007044 3300031240 Bacteria 7010
136 Ga0265320_10045384 3300031240 Bacteria 2159
137 Ga0265340_10036711 3300031247 Bacteria 2428
138 Ga0265339_10001507 3300031249 Bacteria 17203
139 Ga0265327_10002590 3300031251 Bacteria 18716
140 Ga0265327_10004859 3300031251 Bacteria 11624
141 Ga0265327_10056803 3300031251 Bacteria 2015
142 Ga0265316_10128536 3300031344 Bacteria 1909
143 Ga0265316_10161149 3300031344 Bacteria 1677
144 Ga0265313_10002054 3300031595 Bacteria 18055
145 Ga0307416_100124149 3300032002 Bacteria 2309
146 Ga0373930_0001365 3300034816 Bacteria 3605
147 Ga0373928_0000015 3300035084 Bacteria 30043
148 Ga0373929_0001261 3300035085 Bacteria 4888
149 Ga0373944_0001137 3300035089 Bacteria 6627
150 Ga0373932_0000002 3300035112 Bacteria 711821
151 Ga0373962_0000053 3300035242 Bacteria 25615
152 Ga0316574_0080616 3300035398 Bacteria 2066
153 Ga0373931_0000015 3300035691 Bacteria 236539
154 Ga0373935_0006254 3300035692 Bacteria 7088
155 Ga0373927_0007134 3300035695 Bacteria 7584
156 Ga0373927_0118079 3300035695 Bacteria 1730
157 Ga0373927_0136134 3300035695 Bacteria 1605
158 Ga0373947_0032218 3300035725 Bacteria 3088
159 Ga0373937_0107377 3300036401 Unclassified 2595
160 Ga0373937_0132364 3300036401 Bacteria 2330
161 Ga0316584_0014206 3300036712 Bacteria 5662
162 Ga0316584_0072434 3300036712 Bacteria 2583
163 Ga0373925_0000306 3300037068 Bacteria 51383
164 Ga0373925_0005272 3300037068 Bacteria 9652
165 Ga0373925_0008845 3300037068 Bacteria 7335
166 Ga0373925_0402118 3300037068 Bacteria 1117
167 Ga0451577_0001107 3300042876 Bacteria 38251
168 Ga0451577_0009233 3300042876 Bacteria 9509
169 Ga0451577_0072518 3300042876 Bacteria 3072
170 Ga0451577_0176815 3300042876 Bacteria 1924
171 Ga0453684_0000046 3300044712 Bacteria 575242
172 Ga0453684_0002234 3300044712 Bacteria 48025
173 Ga0453684_0529941 3300044712 Bacteria 1300
174 Ga0466970_0015012 3300044765 Bacteria 3983
175 Ga0451576_0099921 3300045051 Bacteria 3018
176 Ga0451576_0168365 3300045051 Bacteria 2287
177 Ga0466967_0373473 3300045976 Bacteria 1383
178 Ga0495629_0118882 3300046459 Bacteria 1841
179 Ga0495650_0017204 3300046471 Bacteria 3630
180 Ga0495618_0003292 3300046514 Bacteria 10111
181 Ga0495630_0032243 3300046517 Bacteria 3903
182 Ga0495630_0045421 3300046517 Bacteria 3283
183 Ga0495666_0017572 3300046526 Bacteria 3562
184 Ga0495586_0000823 3300046535 Bacteria 17828
185 Ga0495667_0208093 3300046559 Bacteria 1250
186 Ga0495634_0002967 3300046642 Bacteria 13837
187 Ga0495669_0017450 3300046684 Bacteria 3082
188 Ga0495613_0001891 3300046689 Bacteria 15891
189 Ga0495680_0003238 3300047322 Bacteria 16163
190 Ga0495675_0168054 3300047444 Bacteria 1348
191 Ga0495684_0025727 3300047471 Bacteria 4522
192 Ga0495684_0183562 3300047471 Bacteria 1550
193 Ga0496104_0236944 3300048907 Bacteria 1737
194 Ga0496104_0420417 3300048907 Bacteria 1249
195 Ga0496106_0123233 3300048909 Bacteria 2028
196 Ga0496109_0195000 3300048912 Bacteria 1904
197 Ga0496110_0013274 3300048913 Bacteria 6803
198 Ga0496112_0003197 3300048915 Bacteria 13479
199 Ga0496113_0199646 3300048916 Bacteria 1590
200 Ga0501031_0000039 3300049568 Bacteria 72794
201 Ga0501032_0015831 3300049569 Bacteria 5317
202 Ga0501033_0013210 3300049570 Bacteria 6291
203 Ga0501033_0075157 3300049570 Bacteria 2480
204 Ga0501034_0181224 3300049571 Bacteria 2071
205 Ga0501034_0400465 3300049571 Bacteria 1295
206 Ga0501036_0370377 3300049572 Bacteria 1196
207 Ga0501039_0300379 3300049575 Bacteria 1262
208 Ga0501046_0003835 3300049580 Bacteria 13758
209 Ga0501070_0000546 3300049586 Bacteria 34402
210 Ga0501075_0454893 3300049591 Bacteria 976
211 Ga0501080_0085872 3300049742 Bacteria 2924
212 Ga0501080_0090010 3300049742 Bacteria 2851
213 Ga0501035_0050495 3300049822 Bacteria 3727
214 Ga0501044_0000133 3300049823 Bacteria 91116
215 Ga0501044_0064048 3300049823 Bacteria 3754
216 Ga0501044_0071028 3300049823 Bacteria 3541
217 Ga0501045_0066271 3300049824 Bacteria 2652
218 nmdc:mga0qj67_82749_c1 3300050509 Bacteria 2573
219 nmdc:mga08y16_38145_c1 3300050511 Bacteria 5045
220 nmdc:mga08y16_497794_c1 3300050511 Bacteria 1238
221 Ga0500566_0000013 3300053094 Bacteria 115589
222 Ga0500637_0020425 3300053178 Bacteria 3587
223 Ga0501084_0085421 3300054114 Bacteria 2649
224 Ga0501082_0159768 3300060353 Bacteria 1958
225 Ga0501082_0274344 3300060353 Bacteria 1468
226 Ga0530510_0340687 3300061734 Bacteria 1125
227 2601446096 2600255229 Bacteria 1988965
228 2672338091 2671180330 Bacteria 5521719
229 2688392847 2687453341 Bacteria 6534136
230 2787437974 2786546517 Bacteria 6614109
231 2816506655 2816332139 Bacteria 9138787
232 2816861433 2816332186 Bacteria 5331395
233 2819566817 2818991441 Bacteria 5062707
234 2842687188 2842682962 Bacteria 5589973
235 2849143685 2849139964 Bacteria 5613304
236 2857586335 2857581216 Bacteria 5522813
237 2899366901 2899359706 Bacteria 10940472
238 2936362834 2936361878 Bacteria 5632809
239 2977255751 2977254563 Bacteria 4828420
240 2990276565 2990275345 Bacteria 4887158
241 Ga0501036_0228145
242 LJQas_1010650
243 Ga0065715_10000562
244 Ga0065707_10083410
245 Ga0070683_100098598
246 Ga0070683_100313036
247 Ga0068869_100089793
248 Ga0070661_100045523
249 Ga0070675_100297757
250 Ga0070688_100160828
251 Ga0070688_100228799
252 Ga0070659_100176009
253 Ga0070713_100047421
254 Ga0070713_100496991
255 Ga0070701_10127867
256 Ga0070663_100034671
257 Ga0070663_100094264
258 Ga0070663_100134772
259 Ga0070678_100057959
260 Ga0070678_100090283
261 Ga0070662_100000270
262 Ga0070681_10299917
263 Ga0068867_100062552
264 Ga0070685_10083173
265 Ga0070698_100502770
266 Ga0070697_100077665
267 Ga0070686_100000009
268 Ga0070686_100182024
269 Ga0070695_100009426
270 Ga0070665_100000297
271 Ga0070665_100101308
272 Ga0068855_100083140
273 Ga0068855_100128311
274 Ga0068857_100262069
275 Ga0068854_100060081
276 Ga0068856_100002261
277 Ga0068856_100002931
278 Ga0068859_100005660
279 Ga0068864_100152193
280 Ga0068864_100310137
281 Ga0068861_100020013
282 Ga0068851_10039232
283 Ga0068863_100042919
284 Ga0068858_100226216
285 Ga0068862_100048762
286 Ga0068862_100495913
287 Ga0081455_10000093
288 Ga0075428_100014367
289 Ga0075431_100152364
290 Ga0075434_100564254
291 Ga0068865_100334188
292 Ga0097620_100005659
293 Ga0105240_10045720
294 Ga0105240_10046763
295 Ga0105240_10202068
296 Ga0111539_10065354
297 Ga0105245_10403426
298 Ga0105247_10078561
299 Ga0105243_10096538
300 Ga0105238_10053381
301 Ga0105249_10013650
302 Ga0105239_10048680
303 Ga0157374_10191947
304 Ga0157378_10211532
305 Ga0157372_10048363
306 Ga0157372_10343512
307 Ga0157372_10902682
308 Ga0157375_10306043
309 Ga0157375_10347372
310 Ga0157375_10684320
311 Ga0163163_10017122
312 Ga0163163_10160136
313 Ga0157380_10126685
314 Ga0157379_10154165
315 Ga0157379_10291149
316 Ga0157376_10051776
317 Ga0163161_10122729
318 Ga0207642_10082498
319 Ga0207710_10079069
320 Ga0207688_10027056
321 Ga0207643_10012711
322 Ga0207707_10324618
323 Ga0207695_10089157
324 Ga0207695_10132747
325 Ga0207695_10143071
326 Ga0207663_10015996
327 Ga0207657_10152852
328 Ga0207681_10115483
329 Ga0207694_10014530
330 Ga0207659_10373148
331 Ga0207690_10005260
332 Ga0207706_10000905
333 Ga0207706_10170333
334 Ga0207669_10363803
335 Ga0207691_10148908
336 Ga0207661_10201941
337 Ga0207667_10101385
338 Ga0207667_10459197
339 Ga0207651_10448393
340 Ga0207668_10187195
341 Ga0207703_10194649
342 Ga0207639_10306115
343 Ga0207678_10013784
344 Ga0207678_10025378
345 Ga0207678_10039942
346 Ga0207708_10117415
347 Ga0207702_10001253
348 Ga0207702_10004844
349 Ga0207674_10153079
350 Ga0207675_100003979
351 Ga0207683_10092938
352 Ga0268266_10161122
353 Ga0265337_1000219
354 Ga0265337_1000536
355 Ga0265337_1010331
356 Ga0265337_1024108
357 Ga0265337_1031990
358 Ga0265326_10019891
359 Ga0265319_1000001
360 Ga0265319_1026315
361 Ga0265334_10006900
362 Ga0265323_10008023
363 Ga0265336_10000792
364 Ga0265338_10002692
365 Ga0265338_10005518
366 Ga0265338_10045827
367 Ga0265338_10068834
368 Ga0265338_10088514
369 Ga0265338_10093502
370 Ga0265338_10258987
371 Ga0265324_10000808
372 Ga0265324_10014156
373 Ga0265324_10044820
374 Ga0265332_10036453
375 Ga0265320_10007044
376 Ga0265320_10045384
377 Ga0265340_10036711
378 Ga0265339_10001507
379 Ga0265327_10002590
380 Ga0265327_10004859
381 Ga0265327_10056803
382 Ga0265316_10128536
383 Ga0265316_10161149
384 Ga0265313_10002054
385 Ga0307416_100124149
386 Ga0373930_0001365
387 Ga0373928_0000015
388 Ga0373929_0001261
389 Ga0373944_0001137
390 Ga0373932_0000002
391 Ga0373962_0000053
392 Ga0316574_0080616
393 Ga0373931_0000015
394 Ga0373935_0006254
395 Ga0373927_0007134
396 Ga0373927_0118079
397 Ga0373927_0136134
398 Ga0373947_0032218
399 Ga0373937_0107377
400 Ga0373937_0132364
401 Ga0316584_0014206
402 Ga0316584_0072434
403 Ga0373925_0000306
404 Ga0373925_0005272
405 Ga0373925_0008845
406 Ga0373925_0402118
407 Ga0451577_0001107
408 Ga0451577_0009233
409 Ga0451577_0072518
410 Ga0451577_0176815
411 Ga0453684_0000046
412 Ga0453684_0002234
413 Ga0453684_0529941
414 Ga0466970_0015012
415 Ga0451576_0099921
416 Ga0451576_0168365
417 Ga0466967_0373473
418 Ga0495629_0118882
419 Ga0495650_0017204
420 Ga0495618_0003292
421 Ga0495630_0032243
422 Ga0495630_0045421
423 Ga0495666_0017572
424 Ga0495586_0000823
425 Ga0495667_0208093
426 Ga0495634_0002967
427 Ga0495669_0017450
428 Ga0495613_0001891
429 Ga0495680_0003238
430 Ga0495675_0168054
431 Ga0495684_0025727
432 Ga0495684_0183562
433 Ga0496104_0236944
434 Ga0496104_0420417
435 Ga0496106_0123233
436 Ga0496109_0195000
437 Ga0496110_0013274
438 Ga0496112_0003197
439 Ga0496113_0199646
440 Ga0501031_0000039
441 Ga0501032_0015831
442 Ga0501033_0013210
443 Ga0501033_0075157
444 Ga0501034_0181224
445 Ga0501034_0400465
446 Ga0501036_0370377
447 Ga0501039_0300379
448 Ga0501046_0003835
449 Ga0501070_0000546
450 Ga0501075_0454893
451 Ga0501080_0085872
452 Ga0501080_0090010
453 Ga0501035_0050495
454 Ga0501044_0000133
455 Ga0501044_0064048
456 Ga0501044_0071028
457 Ga0501045_0066271
458 nmdc:mga0qj67_82749_c1
459 nmdc:mga08y16_38145_c1
460 nmdc:mga08y16_497794_c1
461 Ga0500566_0000013
462 Ga0500637_0020425
463 Ga0501084_0085421
464 Ga0501082_0159768
465 Ga0501082_0274344
466 Ga0530510_0340687
467 2601446096
468 2672338091
469 2688392847
470 2787437974
471 2816506655
472 2816861433
473 2819566817
474 2842687188
475 2849143685
476 2857586335
477 2899366901
478 2936362834
479 2977255751
480 2990276565

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

60

303

0.94

PF04321

RmlD_sub_bind

RmlD substrate binding domain

58

222

0.93

PF02719

Polysacc_synt_2

Polysaccharide biosynthesis protein

60

234

0.86

PF05368

NmrA

NmrA-like family

60

180

0.85

PF16363

GDP_Man_Dehyd

GDP-mannose 4,6 dehydratase

61

366

0.84

PF01073

3Beta_HSD

3-beta hydroxysteroid dehydrogenase/isomerase family

61

294

0.76

PF13460

NAD_binding_10

NAD(P)H-binding

64

213

0.71

Structural Annotation

Top 5 Hits

ID Description Score Start End
1lrj-assembly1.cif.gz_A-2 crystal structure of e. coli udp-galactose 4-epimerase complexed with udp-n-acetylglucosamine 0.9685 1 317
2c20-assembly3.cif.gz_F crystal structure of udp-glucose 4-epimerase 0.9657 1 317
4wok-assembly1.cif.gz_A crystal structure of udp-glucose 4-epimerase from brucella ovis in complex with nad 0.9635 2 314
4lis-assembly1.cif.gz_A crystal structure of udp-galactose-4-epimerase from aspergillus nidulans 0.9626 2 316
1lrk-assembly1.cif.gz_A crystal structure of escherichia coli udp-galactose 4-epimerase mutant y299c complexed with udp-n-acetylglucosamine 0.9597 1 317
ID Description Score Start End Superfamily
2c20D02 Alpha Beta;Alpha-Beta Complex;UDP-galactose 4-epimerase; domain 1;UDP-galactose 4-epimerase, domain 1 0.9826 177 318 3.90.25.10
af_A0A1D6K005_288_418_3.90.25.10 Alpha Beta;Alpha-Beta Complex;UDP-galactose 4-epimerase; domain 1;UDP-galactose 4-epimerase, domain 1 0.9729 192 317 3.90.25.10
af_A0A1D6PCE2_262_419_3.90.25.10 Alpha Beta;Alpha-Beta Complex;UDP-galactose 4-epimerase; domain 1;UDP-galactose 4-epimerase, domain 1 0.9697 175 317 3.90.25.10
3zdnC01 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9589 2 32 3.50.50.60
6cr0A01 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9534 2 32 3.50.50.60
ID Description Score Start End GO Terms
AF-A0A2T0KLV6-F1-model_v4 UDP-glucose 4-epimerase (EC 5.1.3.2) 0.9855 1 319 GO:0003978
GO:0033499
AF-A0A3M1YL98-F1-model_v4 UDP-glucose 4-epimerase (Galactowaldenase) (UDP-galactose 4-epimerase) 0.9843 1 184 GO:0016853
GO:0033499
AF-A0A0F9H5A2-F1-model_v4 NAD-dependent epimerase/dehydratase domain-containing protein 0.9827 1 254 GO:0003978
GO:0033499
AF-G6C3G9-F1-model_v4 UDP-glucose 4-epimerase (Galactowaldenase) (UDP-galactose 4-epimerase) 0.9809 1 175 GO:0016853
GO:0033499
AF-A0A838UQ82-F1-model_v4 UDP-glucose 4-epimerase (EC 5.1.3.2) 0.9796 1 317 GO:0003978
GO:0033499

Map