F353264

General Info

Members Datasets Scaffolds Average Seq Length
240 185 480 313

Family's Representative Sequence

Representative Sequence 3300049579|Ga0501043_0101549|Ga0501043_0101549_355_1302
Length 309
Sequence MAYFDVDNTERVVDDSVQGSVSDYVTLLKPRVMSLVVFTAFVGLAIAPGHLNWVLAAAALLAASGALNMWYDADIDAQMRRTAPRPIPAGRVPAGDALVLGVGLSVGSVAFLQLVTNWLAAGLLAFTIFFYVVIYTIWLKRSTPQNIVIGGAAGALPPMIGWAAVTGTVSLDSFILFLIIFLWTPPHFWALALYKSEDYAKAGVPMLPVVSGAATTKRQILIYSVVLTVVAAVAPVLTGLATPAYGIVAALLGAVFVWLAWQISRMPADDREVRPARRLFAYSMLYLFLLFTVLLVENGFDWRLAGLAT

Samples

Sample ID Description Type Environment
1 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
2 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
3 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
4 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
5 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
6 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
7 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
8 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
9 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
10 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
11 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
12 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
13 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
14 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
15 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
16 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
17 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
18 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
19 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
20 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
21 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
22 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
23 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
24 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
25 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
26 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
27 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
28 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
29 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
30 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
31 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
33 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
34 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
35 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
36 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
37 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
38 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
39 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
40 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
41 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
42 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
43 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
44 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300027512 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
59 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
60 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
61 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
62 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
63 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
64 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
65 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
66 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
67 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
68 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
69 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
70 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
71 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
72 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
73 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
74 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
75 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
76 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
77 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
78 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
79 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
80 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
81 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
82 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
83 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
84 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
85 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
86 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
87 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
88 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
89 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
90 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
91 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
92 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
93 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
94 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
95 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
96 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
97 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
98 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
99 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
100 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
101 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
102 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
103 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
104 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
105 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
106 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
107 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
108 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
109 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
110 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
111 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
112 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
113 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
114 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
115 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
116 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
117 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
118 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
119 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
120 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
121 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
122 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
123 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
124 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
125 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
126 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
127 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
128 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
129 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
130 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
131 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
132 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
133 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
134 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
135 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
136 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
137 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
141 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
144 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
145 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
146 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
147 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
148 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
149 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
150 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
151 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
152 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
153 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
154 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
155 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
156 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
157 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
158 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
159 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
160 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
161 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
162 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
163 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
164 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
165 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
166 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
167 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
168 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
169 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
170 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
171 2508501114 Microvirga lotononidis WSM3557 Isolate Nodule
172 2545555834 Methylobacterium sp. WSM2598 Isolate Nodule
173 2643221629 Devosia sp. Root105 Isolate Unclassified
174 2643221662 Devosia sp. Root413D1 Isolate Unclassified
175 2643221688 Rhizobium sp. Root482 Isolate Unclassified
176 2773857925 Microvirga vignae BR3299 Isolate Unclassified
177 2835312727 Microvirga calopogonii CCBAU 65841 Isolate Nodule
178 2837651117 Pseudohoeflea suaedae YC6898 Isolate Unclassified
179 2842694124 Methylopila sp. R-72369 Isolate Unclassified
180 2882456835 Microvirga sp. KLBC 81 Isolate Unclassified
181 2894232714 Microvirga tunisiensis Lmie10 Isolate Nodule
182 2917699015 Bosea sp. F3-2 Isolate Rhizosphere
183 2996336353 Mesorhizobium sp. YM1C-6-2 Isolate Unclassified
184 3003665799 Methylobacterium aquaticum BG2 Isolate Unclassified
185 641522639 Methylobacterium sp. 4-46 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 93.75
Metatranscriptomes 0
Isolates 6.25

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.17
Nodule 2.08
Rhizoplane 3.33
Rhizosphere 82.92
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501043_0101549 3300049579 Bacteria 2261
2 Ga0055526_1002788 3300003771 Bacteria 11579
3 Ga0070660_100179165 3300005339 Bacteria 1715
4 Ga0070659_100033078 3300005366 Bacteria 4015
5 Ga0070714_100191040 3300005435 Bacteria 1869
6 Ga0070713_100250679 3300005436 Bacteria 1615
7 Ga0070713_100461056 3300005436 Bacteria 1195
8 Ga0070711_100172684 3300005439 Bacteria 1649
9 Ga0070711_100267436 3300005439 Bacteria 1348
10 Ga0070678_100011257 3300005456 Bacteria 5510
11 Ga0070681_10433745 3300005458 Bacteria 1226
12 Ga0070665_100231352 3300005548 Bacteria 1848
13 Ga0068855_100409972 3300005563 Bacteria 1484
14 Ga0068856_100490148 3300005614 Bacteria 1250
15 Ga0068864_100128572 3300005618 Bacteria 2273
16 Ga0068861_100147977 3300005719 Bacteria 1924
17 Ga0068858_100133910 3300005842 Bacteria 2324
18 Ga0081540_1000168 3300005983 Bacteria 68153
19 Ga0070717_10204963 3300006028 Bacteria 1729
20 Ga0075365_10003120 3300006038 Bacteria 8433
21 Ga0075368_10006842 3300006042 Bacteria 4006
22 Ga0070715_10013349 3300006163 Bacteria 3015
23 Ga0070712_100029028 3300006175 Bacteria 3705
24 Ga0075367_10044057 3300006178 Bacteria 2614
25 Ga0075369_10010405 3300006186 Bacteria 3637
26 Ga0068871_100173322 3300006358 Bacteria 1850
27 Ga0068871_100186411 3300006358 Bacteria 1785
28 Ga0075434_100320306 3300006871 Bacteria 1571
29 Ga0075436_100006350 3300006914 Bacteria 8100
30 Ga0099794_10011507 3300007265 Bacteria 3790
31 Ga0099795_10060863 3300007788 Bacteria 1400
32 Ga0111539_10234511 3300009094 Bacteria 2136
33 Ga0105245_10001330 3300009098 Bacteria 22369
34 Ga0114129_10679413 3300009147 Bacteria 1326
35 Ga0105241_10084406 3300009174 Bacteria 2493
36 Ga0105242_10036941 3300009176 Bacteria 3922
37 Ga0105238_10457309 3300009551 Bacteria 1274
38 Ga0099796_10000771 3300010159 Bacteria 5762
39 Ga0099796_10031742 3300010159 Bacteria 1726
40 Ga0105246_10079442 3300011119 Bacteria 2333
41 Ga0105246_10190713 3300011119 Bacteria 1586
42 Ga0157370_10129944 3300013104 Bacteria 2350
43 Ga0157375_10235499 3300013308 Bacteria 1990
44 Ga0182008_10081307 3300014497 Bacteria 1595
45 Ga0157379_10013134 3300014968 Bacteria 7251
46 Ga0157379_10367419 3300014968 Bacteria 1319
47 Ga0213876_10000610 3300021384 Bacteria 26430
48 Ga0213876_10028082 3300021384 Bacteria 2967
49 Ga0213875_10012221 3300021388 Bacteria 4246
50 Ga0209564_1000019 3300025295 Bacteria 573686
51 Ga0207680_10081389 3300025903 Bacteria 2036
52 Ga0207695_10000018 3300025913 Bacteria 766611
53 Ga0207693_10000488 3300025915 Bacteria 35928
54 Ga0207693_10093668 3300025915 Bacteria 2355
55 Ga0207663_10002652 3300025916 Bacteria 8611
56 Ga0207663_10287045 3300025916 Bacteria 1224
57 Ga0207657_10209321 3300025919 Bacteria 1565
58 Ga0207687_10248892 3300025927 Bacteria 1412
59 Ga0207664_10095544 3300025929 Bacteria 2445
60 Ga0207664_10223841 3300025929 Bacteria 1633
61 Ga0207690_10076591 3300025932 Bacteria 2323
62 Ga0207686_10040723 3300025934 Bacteria 2827
63 Ga0207679_10119209 3300025945 Bacteria 2098
64 Ga0207677_10110224 3300026023 Bacteria 2048
65 Ga0207677_10351835 3300026023 Bacteria 1235
66 Ga0207703_10038996 3300026035 Bacteria 3795
67 Ga0207675_100315049 3300026118 Bacteria 1526
68 Ga0209179_1008573 3300027512 Bacteria 1727
69 Ga0265338_10086767 3300028800 Bacteria 2602
70 Ga0265338_10111743 3300028800 Bacteria 2199
71 Ga0265332_10090282 3300031238 Bacteria 1296
72 Ga0265320_10001113 3300031240 Bacteria 19838
73 Ga0265325_10013302 3300031241 Bacteria 4688
74 Ga0265325_10027487 3300031241 Bacteria 3075
75 Ga0265325_10167572 3300031241 Bacteria 1030
76 Ga0265340_10000397 3300031247 Bacteria 23270
77 Ga0265340_10032482 3300031247 Bacteria 2606
78 Ga0265339_10013283 3300031249 Bacteria 4995
79 Ga0265331_10000003 3300031250 Bacteria 499358
80 Ga0265331_10076509 3300031250 Bacteria 1559
81 Ga0265313_10001332 3300031595 Bacteria 23248
82 Ga0316575_10014220 3300031665 Bacteria 2984
83 Ga0316579_10165287 3300031691 Bacteria 1069
84 Ga0265314_10017535 3300031711 Bacteria 5617
85 Ga0265314_10055341 3300031711 Bacteria 2740
86 Ga0265342_10017459 3300031712 Bacteria 4664
87 Ga0316576_10060905 3300031727 Bacteria 2766
88 Ga0316578_10003100 3300031728 Bacteria 7509
89 Ga0307407_10026772 3300031903 Bacteria 3059
90 Ga0307414_10028557 3300032004 Bacteria 3620
91 Ga0307411_10055116 3300032005 Bacteria 2614
92 Ga0373936_0000156 3300035113 Bacteria 22727
93 Ga0373936_0034324 3300035113 Bacteria 2015
94 Ga0373936_0058870 3300035113 Bacteria 1565
95 Ga0373945_0036025 3300035116 Bacteria 1771
96 Ga0373954_0001229 3300035118 Bacteria 10310
97 Ga0373956_0113796 3300035119 Bacteria 1261
98 Ga0373946_0011305 3300035171 Bacteria 3327
99 Ga0373946_0023276 3300035171 Bacteria 2419
100 Ga0373955_0000384 3300035172 Bacteria 18669
101 Ga0316574_0000021 3300035398 Bacteria 39279
102 Ga0373935_0000026 3300035692 Bacteria 58851
103 Ga0373927_0053053 3300035695 Bacteria 2622
104 Ga0373933_0008667 3300035724 Bacteria 5545
105 Ga0373947_0171915 3300035725 Bacteria 1406
106 Ga0373937_0000475 3300036401 Bacteria 37166
107 Ga0316584_0008990 3300036712 Bacteria 6909
108 Ga0373925_0000034 3300037068 Bacteria 144257
109 Ga0373925_0342743 3300037068 Bacteria 1212
110 Ga0395905_0142871 3300037471 Bacteria 2251
111 Ga0436365_0041342 3300039437 Bacteria 25133
112 Ga0436365_0075908 3300039437 Bacteria 1793
113 Ga0436365_0428728 3300039437 Bacteria 2448
114 Ga0436365_0933871 3300039437 Bacteria 3296
115 Ga0436365_1317879 3300039437 Bacteria 37660
116 Ga0436360_0837240 3300039438 Bacteria 3385
117 Ga0466960_0137809 3300044901 Bacteria 1293
118 Ga0466967_0083540 3300045976 Bacteria 2888
119 Ga0495592_0000031 3300046454 Bacteria 128596
120 Ga0495629_0012286 3300046459 Bacteria 6202
121 Ga0495651_0000200 3300046462 Bacteria 45618
122 Ga0495651_0081033 3300046462 Bacteria 2451
123 Ga0495651_0177755 3300046462 Bacteria 1509
124 Ga0495653_0000063 3300046463 Bacteria 93232
125 Ga0495582_0030708 3300046473 Bacteria 2951
126 Ga0495582_0054797 3300046473 Bacteria 2198
127 Ga0495639_0068602 3300046475 Bacteria 1635
128 Ga0495662_0037450 3300046476 Bacteria 2342
129 Ga0495664_0000004 3300046477 Bacteria 489411
130 Ga0495608_0000005 3300046511 Bacteria 350726
131 Ga0495618_0001532 3300046514 Bacteria 15514
132 Ga0495618_0245984 3300046514 Bacteria 1123
133 Ga0495628_0000001 3300046516 Bacteria 917742
134 Ga0495630_0072142 3300046517 Bacteria 2599
135 Ga0495652_0000002 3300046529 Bacteria 946606
136 Ga0495665_0061247 3300046531 Bacteria 1987
137 Ga0495640_0000001 3300046533 Bacteria 853827
138 Ga0495640_0039802 3300046533 Bacteria 3296
139 Ga0495640_0099820 3300046533 Bacteria 1907
140 Ga0495586_0083743 3300046535 Bacteria 1755
141 Ga0495587_0000016 3300046536 Bacteria 185585
142 Ga0495609_0013381 3300046538 Bacteria 3876
143 Ga0495645_0000002 3300046543 Bacteria 651644
144 Ga0495667_0000007 3300046559 Bacteria 234736
145 Ga0495634_0001607 3300046642 Bacteria 19751
146 Ga0495635_0000002 3300046663 Bacteria 490490
147 Ga0495657_0000554 3300046675 Bacteria 34519
148 Ga0495599_0000005 3300046678 Bacteria 300169
149 Ga0495623_0000016 3300046679 Bacteria 113454
150 Ga0495646_0000002 3300046680 Bacteria 310568
151 Ga0495658_0000632 3300046683 Bacteria 19106
152 Ga0495613_0057111 3300046689 Bacteria 2866
153 Ga0495613_0138223 3300046689 Bacteria 1742
154 Ga0495600_0000018 3300046809 Bacteria 102683
155 Ga0495604_0000020 3300047317 Bacteria 171989
156 Ga0495604_0156206 3300047317 Bacteria 1616
157 Ga0495674_0000002 3300047319 Bacteria 642785
158 Ga0495674_0256689 3300047319 Bacteria 1437
159 Ga0495680_0000862 3300047322 Bacteria 33741
160 Ga0495675_0000120 3300047444 Bacteria 57071
161 Ga0495684_0000017 3300047471 Bacteria 160663
162 Ga0495593_0002994 3300047673 Bacteria 10177
163 Ga0495602_0000040 3300048088 Bacteria 127280
164 Ga0495602_0101916 3300048088 Bacteria 2354
165 Ga0496100_0170322 3300048903 Bacteria 1568
166 Ga0496104_0094852 3300048907 Bacteria 2854
167 Ga0496104_0151193 3300048907 Bacteria 2228
168 Ga0496105_0100979 3300048908 Bacteria 2382
169 Ga0496109_0276274 3300048912 Bacteria 1583
170 Ga0496112_0268649 3300048915 Bacteria 1654
171 Ga0496114_0113312 3300048917 Bacteria 2325
172 Ga0496114_0119982 3300048917 Bacteria 2261
173 Ga0496126_0332821 3300048929 Bacteria 1246
174 Ga0501032_0010591 3300049569 Bacteria 6642
175 Ga0501033_0071255 3300049570 Bacteria 2553
176 Ga0501034_0008496 3300049571 Bacteria 10845
177 Ga0501034_0109360 3300049571 Bacteria 2755
178 Ga0501034_0113360 3300049571 Bacteria 2701
179 Ga0501034_0153307 3300049571 Bacteria 2279
180 Ga0501036_0051170 3300049572 Bacteria 3497
181 Ga0501037_0014091 3300049573 Bacteria 5889
182 Ga0501038_0006293 3300049574 Bacteria 10978
183 Ga0501039_0027344 3300049575 Bacteria 4386
184 Ga0501042_0026457 3300049578 Bacteria 4076
185 Ga0501043_0021553 3300049579 Bacteria 5053
186 Ga0501046_0003181 3300049580 Bacteria 15155
187 Ga0501047_0002631 3300049581 Bacteria 17092
188 Ga0501047_0022690 3300049581 Bacteria 6024
189 Ga0501047_0101844 3300049581 Bacteria 2751
190 Ga0501048_0002118 3300049582 Bacteria 15125
191 Ga0501068_0020099 3300049584 Bacteria 3886
192 Ga0501069_0007476 3300049585 Bacteria 5738
193 Ga0501070_0003784 3300049586 Bacteria 13074
194 Ga0501070_0248007 3300049586 Bacteria 1457
195 Ga0501072_0071420 3300049588 Bacteria 2743
196 Ga0501073_0001658 3300049589 Bacteria 16509
197 Ga0501073_0107816 3300049589 Bacteria 1933
198 Ga0501074_0002248 3300049590 Bacteria 13406
199 Ga0501079_0009837 3300049741 Bacteria 7253
200 Ga0501079_0250014 3300049741 Bacteria 1386
201 Ga0501080_0082958 3300049742 Bacteria 2978
202 Ga0501080_0172447 3300049742 Bacteria 1994
203 Ga0501080_0209503 3300049742 Bacteria 1786
204 Ga0501083_0000872 3300049744 Bacteria 19937
205 Ga0501083_0095012 3300049744 Bacteria 1967
206 Ga0501035_0011853 3300049822 Bacteria 8071
207 Ga0501035_0012078 3300049822 Bacteria 7986
208 Ga0501035_0113718 3300049822 Bacteria 2371
209 Ga0501035_0148486 3300049822 Bacteria 2035
210 Ga0501044_0033316 3300049823 Bacteria 5414
211 Ga0501044_0114956 3300049823 Bacteria 2696
212 Ga0501044_0225920 3300049823 Bacteria 1822
213 Ga0501045_0077095 3300049824 Bacteria 2456
214 nmdc:mga0yw44_15193_c1 3300050492 Bacteria 4115
215 nmdc:mga06z11_19913_c2 3300050494 Bacteria 1917
216 nmdc:mga04h51_13399_c1 3300050495 Bacteria 2320
217 nmdc:mga08y16_475584_c1 3300050511 Bacteria 1272
218 nmdc:mga0n895_36768_c1 3300050512 Bacteria 4730
219 Ga0495601_0000018 3300053077 Bacteria 171665
220 Ga0495601_0018796 3300053077 Bacteria 4208
221 Ga0495612_0000011 3300053078 Bacteria 224729
222 Ga0495595_0000016 3300053084 Bacteria 134329
223 Ga0495619_0000014 3300053085 Bacteria 261449
224 Ga0500641_0012005 3300053096 Bacteria 3156
225 Ga0501084_0113607 3300054114 Bacteria 2276
226 2509080120 2508501114 Bacteria 7082538
227 2545677903 2545555834 Bacteria 8130841
228 2644168895 2643221629 Bacteria 5850260
229 2644347446 2643221662 Bacteria 5851492
230 2644493654 2643221688 Bacteria 5260751
231 2774872798 2773857925 Bacteria 6472445
232 2835313277 2835312727 Bacteria 7413381
233 2837652379 2837651117 Bacteria 3772164
234 2842696424 2842694124 Bacteria 4063419
235 2882456954 2882456835 Bacteria 6863978
236 2894238008 2894232714 Bacteria 8834183
237 2917701534 2917699015 Bacteria 7043791
238 2996340051 2996336353 Bacteria 5511628
239 3003670663 3003665799 Bacteria 7279786
240 641642572 641522639 Bacteria 7737025
241 Ga0501043_0101549
242 Ga0055526_1002788
243 Ga0070660_100179165
244 Ga0070659_100033078
245 Ga0070714_100191040
246 Ga0070713_100250679
247 Ga0070713_100461056
248 Ga0070711_100172684
249 Ga0070711_100267436
250 Ga0070678_100011257
251 Ga0070681_10433745
252 Ga0070665_100231352
253 Ga0068855_100409972
254 Ga0068856_100490148
255 Ga0068864_100128572
256 Ga0068861_100147977
257 Ga0068858_100133910
258 Ga0081540_1000168
259 Ga0070717_10204963
260 Ga0075365_10003120
261 Ga0075368_10006842
262 Ga0070715_10013349
263 Ga0070712_100029028
264 Ga0075367_10044057
265 Ga0075369_10010405
266 Ga0068871_100173322
267 Ga0068871_100186411
268 Ga0075434_100320306
269 Ga0075436_100006350
270 Ga0099794_10011507
271 Ga0099795_10060863
272 Ga0111539_10234511
273 Ga0105245_10001330
274 Ga0114129_10679413
275 Ga0105241_10084406
276 Ga0105242_10036941
277 Ga0105238_10457309
278 Ga0099796_10000771
279 Ga0099796_10031742
280 Ga0105246_10079442
281 Ga0105246_10190713
282 Ga0157370_10129944
283 Ga0157375_10235499
284 Ga0182008_10081307
285 Ga0157379_10013134
286 Ga0157379_10367419
287 Ga0213876_10000610
288 Ga0213876_10028082
289 Ga0213875_10012221
290 Ga0209564_1000019
291 Ga0207680_10081389
292 Ga0207695_10000018
293 Ga0207693_10000488
294 Ga0207693_10093668
295 Ga0207663_10002652
296 Ga0207663_10287045
297 Ga0207657_10209321
298 Ga0207687_10248892
299 Ga0207664_10095544
300 Ga0207664_10223841
301 Ga0207690_10076591
302 Ga0207686_10040723
303 Ga0207679_10119209
304 Ga0207677_10110224
305 Ga0207677_10351835
306 Ga0207703_10038996
307 Ga0207675_100315049
308 Ga0209179_1008573
309 Ga0265338_10086767
310 Ga0265338_10111743
311 Ga0265332_10090282
312 Ga0265320_10001113
313 Ga0265325_10013302
314 Ga0265325_10027487
315 Ga0265325_10167572
316 Ga0265340_10000397
317 Ga0265340_10032482
318 Ga0265339_10013283
319 Ga0265331_10000003
320 Ga0265331_10076509
321 Ga0265313_10001332
322 Ga0316575_10014220
323 Ga0316579_10165287
324 Ga0265314_10017535
325 Ga0265314_10055341
326 Ga0265342_10017459
327 Ga0316576_10060905
328 Ga0316578_10003100
329 Ga0307407_10026772
330 Ga0307414_10028557
331 Ga0307411_10055116
332 Ga0373936_0000156
333 Ga0373936_0034324
334 Ga0373936_0058870
335 Ga0373945_0036025
336 Ga0373954_0001229
337 Ga0373956_0113796
338 Ga0373946_0011305
339 Ga0373946_0023276
340 Ga0373955_0000384
341 Ga0316574_0000021
342 Ga0373935_0000026
343 Ga0373927_0053053
344 Ga0373933_0008667
345 Ga0373947_0171915
346 Ga0373937_0000475
347 Ga0316584_0008990
348 Ga0373925_0000034
349 Ga0373925_0342743
350 Ga0395905_0142871
351 Ga0436365_0041342
352 Ga0436365_0075908
353 Ga0436365_0428728
354 Ga0436365_0933871
355 Ga0436365_1317879
356 Ga0436360_0837240
357 Ga0466960_0137809
358 Ga0466967_0083540
359 Ga0495592_0000031
360 Ga0495629_0012286
361 Ga0495651_0000200
362 Ga0495651_0081033
363 Ga0495651_0177755
364 Ga0495653_0000063
365 Ga0495582_0030708
366 Ga0495582_0054797
367 Ga0495639_0068602
368 Ga0495662_0037450
369 Ga0495664_0000004
370 Ga0495608_0000005
371 Ga0495618_0001532
372 Ga0495618_0245984
373 Ga0495628_0000001
374 Ga0495630_0072142
375 Ga0495652_0000002
376 Ga0495665_0061247
377 Ga0495640_0000001
378 Ga0495640_0039802
379 Ga0495640_0099820
380 Ga0495586_0083743
381 Ga0495587_0000016
382 Ga0495609_0013381
383 Ga0495645_0000002
384 Ga0495667_0000007
385 Ga0495634_0001607
386 Ga0495635_0000002
387 Ga0495657_0000554
388 Ga0495599_0000005
389 Ga0495623_0000016
390 Ga0495646_0000002
391 Ga0495658_0000632
392 Ga0495613_0057111
393 Ga0495613_0138223
394 Ga0495600_0000018
395 Ga0495604_0000020
396 Ga0495604_0156206
397 Ga0495674_0000002
398 Ga0495674_0256689
399 Ga0495680_0000862
400 Ga0495675_0000120
401 Ga0495684_0000017
402 Ga0495593_0002994
403 Ga0495602_0000040
404 Ga0495602_0101916
405 Ga0496100_0170322
406 Ga0496104_0094852
407 Ga0496104_0151193
408 Ga0496105_0100979
409 Ga0496109_0276274
410 Ga0496112_0268649
411 Ga0496114_0113312
412 Ga0496114_0119982
413 Ga0496126_0332821
414 Ga0501032_0010591
415 Ga0501033_0071255
416 Ga0501034_0008496
417 Ga0501034_0109360
418 Ga0501034_0113360
419 Ga0501034_0153307
420 Ga0501036_0051170
421 Ga0501037_0014091
422 Ga0501038_0006293
423 Ga0501039_0027344
424 Ga0501042_0026457
425 Ga0501043_0021553
426 Ga0501046_0003181
427 Ga0501047_0002631
428 Ga0501047_0022690
429 Ga0501047_0101844
430 Ga0501048_0002118
431 Ga0501068_0020099
432 Ga0501069_0007476
433 Ga0501070_0003784
434 Ga0501070_0248007
435 Ga0501072_0071420
436 Ga0501073_0001658
437 Ga0501073_0107816
438 Ga0501074_0002248
439 Ga0501079_0009837
440 Ga0501079_0250014
441 Ga0501080_0082958
442 Ga0501080_0172447
443 Ga0501080_0209503
444 Ga0501083_0000872
445 Ga0501083_0095012
446 Ga0501035_0011853
447 Ga0501035_0012078
448 Ga0501035_0113718
449 Ga0501035_0148486
450 Ga0501044_0033316
451 Ga0501044_0114956
452 Ga0501044_0225920
453 Ga0501045_0077095
454 nmdc:mga0yw44_15193_c1
455 nmdc:mga06z11_19913_c2
456 nmdc:mga04h51_13399_c1
457 nmdc:mga08y16_475584_c1
458 nmdc:mga0n895_36768_c1
459 Ga0495601_0000018
460 Ga0495601_0018796
461 Ga0495612_0000011
462 Ga0495595_0000016
463 Ga0495619_0000014
464 Ga0500641_0012005
465 Ga0501084_0113607
466 2509080120
467 2545677903
468 2644168895
469 2644347446
470 2644493654
471 2774872798
472 2835313277
473 2837652379
474 2842696424
475 2882456954
476 2894238008
477 2917701534
478 2996340051
479 3003670663
480 641642572

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01040

UbiA

UbiA prenyltransferase family

36

289

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
7bpu-assembly1.cif.gz_A structural and mechanistic insights into the biosynthesis of digeranylgeranylglyceryl phosphate synthase in membranes 0.802 20 299
7bpu-assembly1.cif.gz_A structural and mechanistic insights into the biosynthesis of digeranylgeranylglyceryl phosphate synthase in membranes 0.7871 20 299
8dz8-assembly2.cif.gz_B neoleukin 4, a de novo designed il-4 mimetic 0.7425 182 289
4tq4-assembly3.cif.gz_C structure of a ubia homolog from archaeoglobus fulgidus bound to dmapp and mg2+ 0.7265 21 296
4od4-assembly1.cif.gz_A error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.7239 28 300
ID Description Score Start End Superfamily
af_P0AEA5_14_182_1.10.357.140 Mainly Alpha;Orthogonal Bundle;Tetracycline Repressor; domain 2;UbiA prenyltransferase 0.9616 31 196 1.10.357.140
af_K8ES01_95_243_1.10.357.140 Mainly Alpha;Orthogonal Bundle;Tetracycline Repressor; domain 2;UbiA prenyltransferase 0.9615 25 174 1.10.357.140
af_A4I0M3_131_276_1.10.357.140 Mainly Alpha;Orthogonal Bundle;Tetracycline Repressor; domain 2;UbiA prenyltransferase 0.9573 29 175 1.10.357.140
af_K8ES01_95_243_1.10.357.140 Mainly Alpha;Orthogonal Bundle;Tetracycline Repressor; domain 2;UbiA prenyltransferase 0.9553 25 174 1.10.357.140
af_P0AEA5_183_296_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.9537 201 298 1.20.1070.10
ID Description Score Start End GO Terms
AF-A0A519YLL6-F1-model_v4 deleted 0.9939 108 306
AF-A0A529NSV7-F1-model_v4 Heme o synthase (EC 2.5.1.141) 0.9938 31 231 GO:0005886
GO:0006783
GO:0008495
AF-A0A383A7E2-F1-model_v4 Protoheme IX farnesyltransferase (Heme B farnesyltransferase) 0.9933 20 271 GO:0005886
GO:0006783
GO:0008495
AF-A0A368A4G7-F1-model_v4 Protoheme IX farnesyltransferase (EC 2.5.1.141) (Heme B farnesyltransferase) (Heme O synthase) 0.9927 15 300 GO:0005886
GO:0008495
GO:0048034
AF-A0A2S7K8E0-F1-model_v4 Protoheme IX farnesyltransferase (EC 2.5.1.141) (Heme B farnesyltransferase) (Heme O synthase) 0.9897 17 305 GO:0005886
GO:0008495
GO:0048034

Map