F353397

General Info

Members Datasets Scaffolds Average Seq Length
241 197 482 720

Family's Representative Sequence

Representative Sequence 3300002705|JGI25156J39149_1005200|JGI25156J39149_10052002
Length 858
Sequence MERERIALAIDGLLFLPLMAPWIFVAGRIKKGGLSERSEFASLPSPRHKSKESFAISGAPFFAYFLWQNKESESAPAGGEREATHQRKDNSETNELMLRFPKTLAPGKPFPLGAQWDGLGINFAVFSANASKIELCIFDPTGRKELTRFALPECTDEVWHGYLPGVEAGLVYGYRAYGPWEPQHGHRFNPHKXLLDPYARRLVGALRWSDALFGYRLXSNRGDLSFDRRDSAPAMPKAVVTDESFNWGNDIRPNTPWSRTVIYEGHVRGFSMLRQDLLPPERGTFSALGDSVFIERLQRLGITAIELLPIHAFLQDQFLVERGLRNYWGYNTLCFFAPEPSYLSAPSLHELKVAIRRLHAAGIEVLLDVVYNHTCEGSELGPTLSFRGLDNASYYRLVPGQERYYINDTGCGNTLNLSHPRVLQMVMDSLRYWVNAFHVDGFRFDLGVTLGREGNGFDPGSGFFDAIRQDPVLSTVKLIAEPWDVGPDGYQVGNHPPGFAEWNDRFRDGIRRFWRGDSGQRPDLAARLTGSGDLFDRRHRRPWASVNYVASHDGFTLHDLVSYADKHNDANGEDNRDGHNDNCSANWGTEGPTEDTAILALRERVTRALLATVFFSNGTPMLLAGDEFGRTQDGNNNAYCQDNALSWLDWSLLENDPGQALARYTARLIALRKESPALRWPHYVHGNTEILPGVQDIAWFDERGQVLSPDAWNDSEARALALRRACVETIDGEARPHVALLLINGAATDLTFTLPEPAMDWQIAIDSAAPEQEAHPHGSGTLKVAGRSVVLLFATQLATIAHIAGQPDADVSGETLGHVPETHNAPQNDLPEQPITDDERTAPTAGQAANDDNGDASR

Samples

Sample ID Description Type Environment
1 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
2 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
3 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
4 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
5 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
6 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
7 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
8 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
9 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
10 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
11 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
12 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
13 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
14 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
15 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
16 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
17 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
18 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
19 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
20 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
21 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
22 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
23 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
24 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
25 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
26 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
27 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
28 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
29 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
30 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
31 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
32 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
33 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
34 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
35 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
36 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
37 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
38 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
39 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
40 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
41 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
42 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
43 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
44 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
45 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
46 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
47 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
48 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
49 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
50 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
51 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
52 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
53 3300020610 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
54 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
55 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
56 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
57 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
58 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
59 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
60 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
66 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
67 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
68 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
69 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
70 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
72 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
73 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
74 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
75 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
76 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
77 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
78 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
91 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
92 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
93 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
94 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
95 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
96 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
97 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
98 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
99 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
100 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
101 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
102 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
103 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
104 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
105 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
106 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
107 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
108 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
109 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
110 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
111 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
112 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
113 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
114 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
115 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
116 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
117 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
118 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
119 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
120 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
121 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
122 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
123 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
124 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
125 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
126 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
127 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
128 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
129 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
130 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
131 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
132 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
133 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
134 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
135 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
136 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
137 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
138 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
139 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
140 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
141 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
142 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
143 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
144 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
145 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
146 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
148 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
149 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
150 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
151 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
152 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
153 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
154 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
155 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
156 3300059643 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 13R_AD_T1_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
157 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
158 2511231026 Herbaspirillum sp. YR522 Isolate Rhizosphere
159 2513237150 Cupriavidus taiwanensis STM6018 Isolate Nodule
160 2513237165 Cupriavidus neocaledonicus STM6070 Isolate Nodule
161 2521172590 Herbaspirillum sp. GW103 Isolate Rhizosphere
162 2551306416 Herbaspirillum seropedicae Os34 Isolate Unclassified
163 2593339238 Luteibacter sp. UNCMF366Tsu5.1 Isolate Unclassified
164 2593339239 Luteibacter sp. UNCMF331Sha3.1 Isolate Unclassified
165 2596583598 Ralstonia sp. UNCCL144 Isolate Unclassified
166 2599185178 Ralstonia sp. NFACC01 Isolate Rhizoplane
167 2600255067 Paraburkholderia kururiensis thiooxydans NBRC 107107 Isolate Unclassified
168 2643221603 Noviherbaspirillum sp. Root189 Isolate Unclassified
169 2718218334 Luteibacter rhizovicinus LJ96 Isolate Rhizosphere
170 2734482264 Dyella sp. AD052 Isolate Unclassified
171 2739367655 Pusillimonas sp. YR330 Isolate Unclassified
172 2765235838 Herbaspirillum robiniae AA6 Isolate Unclassified
173 2821443989 Inquilinus ginsengisoli 584 Isolate Unclassified
174 2839094727 Herbaspirillum robiniae HZ10 Isolate Nodule
175 2842775625 Roseomonas sp. R-71825 Isolate Unclassified
176 2857576091 Pigmentiphaga sp. R-72090 Isolate Unclassified
177 2881927736 Candidimonas sp. SYP-B2681 Isolate Rhizosphere
178 2885266251 Ralstonia sp. SET104 Isolate Nodule
179 2887375801 Parapusillimonas sp. SGNA-6 Isolate Rhizosphere
180 2900577576 Ralstonia sp. TCR112 Isolate Rhizosphere
181 2904439833 Herbaspirillum sp. 1589 Isolate Rhizosphere
182 2904530477 Herbaspirillum huttiense 611 Isolate Unclassified
183 2904584206 Herbaspirillum sp. 1050 Isolate Unclassified
184 2904589729 Herbaspirillum sp. 1130 Isolate Unclassified
185 2904601388 Herbaspirillum sp. 1273 Isolate Rhizosphere
186 2919079590 Herbaspirillum sp. 1173 Isolate Unclassified
187 2919404418 Luteibacter sp. 3190 Isolate Unclassified
188 2923510766 Herbaspirillum rubrisubalbicans SLBN-127 Isolate Rhizosphere
189 2928058823 Ralstonia sp. 1138 Isolate Unclassified
190 2928130867 Herbaspirillum seropedicae 1977 Isolate Unclassified
191 2929199973 Roseomonas sp. R-73070 Hybrid assembly Isolate Unclassified
192 641228493 Gluconacetobacter diazotrophicus PA1 5 Isolate Unclassified
193 643348555 Gluconacetobacter diazotrophicus PA1 5 Isolate Unclassified
194 644736347 Cupriavidus taiwanensis LMG 19424 Isolate Nodule
195 8001522603 Methylomicrobium sp. RS1 Isolate Unclassified
196 8003400568 Cupriavidus gilardii USM5 Isolate Rhizosphere
197 8055909800 Plastoroseomonas hellenica LMG 31523 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 82.57
Metatranscriptomes 0.83
Isolates 16.6

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 23.65
Nodule 2.9
Rhizoplane 3.73
Rhizosphere 54.77
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25156J39149_1005200 3300002705 Bacteria 3811
2 JGI24741J21665_1002229 3300001915 Bacteria 5135
3 JGI24740J21852_10002719 3300001979 Bacteria 7917
4 JGI25154J39366_1000827 3300002738 Bacteria 13435
5 JGI25151J46595_10001798 3300003187 Bacteria 13848
6 JGI25151J46595_10005954 3300003187 Bacteria 6216
7 Ga0055538_1000002 3300003751 Bacteria 999437
8 Ga0055539_1000002 3300003752 Bacteria 999437
9 Ga0055539_1000108 3300003752 Bacteria 91377
10 Ga0055533_1000004 3300003756 Bacteria 999437
11 Ga0055533_1001260 3300003756 Bacteria 6956
12 Ga0055533_1003157 3300003756 Bacteria 3435
13 Ga0055532_1000073 3300003758 Bacteria 131021
14 Ga0055525_1000002 3300003759 Bacteria 999437
15 Ga0055525_1000441 3300003759 Bacteria 24075
16 Ga0055527_1000411 3300003760 Bacteria 17814
17 Ga0055535_1000055 3300003761 Bacteria 131021
18 Ga0055542_1000892 3300003762 Bacteria 20500
19 Ga0055542_1001571 3300003762 Bacteria 10670
20 Ga0055529_1000149 3300003763 Bacteria 100620
21 Ga0055526_1001360 3300003771 Bacteria 17490
22 Ga0055526_1003851 3300003771 Bacteria 9305
23 Ga0055536_1000026 3300003781 Bacteria 166220
24 Ga0055534_1000433 3300003784 Bacteria 24921
25 Ga0055541_1000002 3300003841 Bacteria 896405
26 Ga0070683_100029626 3300005329 Bacteria 4959
27 Ga0070670_100076341 3300005331 Bacteria 2879
28 Ga0070661_100000061 3300005344 Bacteria 86581
29 Ga0070669_100021203 3300005353 Bacteria 4643
30 Ga0070709_10010461 3300005434 Bacteria 5142
31 Ga0070714_100044120 3300005435 Bacteria 3774
32 Ga0070713_100005923 3300005436 Bacteria 8406
33 Ga0070710_10003678 3300005437 Bacteria 7253
34 Ga0070711_100011075 3300005439 Bacteria 5596
35 Ga0070663_100000009 3300005455 Bacteria 187718
36 Ga0070679_100052513 3300005530 Bacteria 4059
37 Ga0070672_100027463 3300005543 Bacteria 4245
38 Ga0068855_100017108 3300005563 Bacteria 8722
39 Ga0070664_100000010 3300005564 Bacteria 165664
40 Ga0068857_100025294 3300005577 Bacteria 5229
41 Ga0068854_100000077 3300005578 Bacteria 69779
42 Ga0068854_100016084 3300005578 Bacteria 4976
43 Ga0068856_100000045 3300005614 Bacteria 110625
44 Ga0068852_100030104 3300005616 Bacteria 4465
45 Ga0081455_10000551 3300005937 Bacteria 48719
46 Ga0081539_10002330 3300005985 Bacteria 27346
47 Ga0081539_10040695 3300005985 Bacteria 2726
48 Ga0070717_10022315 3300006028 Bacteria 5001
49 Ga0075365_10019841 3300006038 Bacteria 4157
50 Ga0099826_10000036 3300006948 Bacteria 104982
51 Ga0105240_10068504 3300009093 Bacteria 4394
52 Ga0105247_10002060 3300009101 Bacteria 13922
53 Ga0105238_10004195 3300009551 Bacteria 14307
54 Ga0105239_10004160 3300010375 Bacteria 17377
55 Ga0105239_10015665 3300010375 Bacteria 8391
56 Ga0157373_10004138 3300013100 Bacteria 10942
57 Ga0157371_10000088 3300013102 Bacteria 145526
58 Ga0157370_10000041 3300013104 Bacteria 133912
59 Ga0157370_10033643 3300013104 Bacteria 4997
60 Ga0157369_10006007 3300013105 Bacteria 14106
61 Ga0157369_10016799 3300013105 Bacteria 8225
62 Ga0157372_10000097 3300013307 Bacteria 90742
63 Ga0163163_10003958 3300014325 Bacteria 12645
64 Ga0182006_1000027 3300015261 Bacteria 252946
65 Ga0182006_1000911 3300015261 Bacteria 19708
66 Ga0182006_1001971 3300015261 Bacteria 11628
67 Ga0154015_1236682 3300020610 Bacteria 14753
68 Ga0213872_10001213 3300021361 Bacteria 17450
69 Ga0213872_10010272 3300021361 Bacteria 4459
70 Ga0213874_10002943 3300021377 Bacteria 3720
71 Ga0213876_10000490 3300021384 Bacteria 31285
72 Ga0213875_10000040 3300021388 Bacteria 156362
73 Ga0213871_10000269 3300021441 Bacteria 6430
74 Ga0209784_100002 3300025224 Bacteria 1753105
75 Ga0209784_100008 3300025224 Bacteria 740293
76 Ga0209566_100003 3300025225 Bacteria 1753105
77 Ga0209566_100006 3300025225 Bacteria 789272
78 Ga0209566_100992 3300025225 Bacteria 12390
79 Ga0209674_100004 3300025226 Bacteria 1753105
80 Ga0209674_100045 3300025226 Bacteria 362387
81 Ga0209674_100116 3300025226 Bacteria 135937
82 Ga0209674_100891 3300025226 Bacteria 9686
83 Ga0209674_102692 3300025226 Bacteria 3654
84 Ga0209672_100128 3300025228 Bacteria 77946
85 Ga0209147_100005 3300025229 Bacteria 1036530
86 Ga0209563_100006 3300025230 Bacteria 1753105
87 Ga0209563_100016 3300025230 Bacteria 802091
88 Ga0209437_101239 3300025233 Bacteria 7191
89 Ga0209258_100007 3300025242 Bacteria 1036530
90 Ga0209646_1000027 3300025246 Bacteria 395141
91 Ga0209026_1002389 3300025250 Bacteria 7080
92 Ga0209677_100003 3300025253 Bacteria 1753105
93 Ga0209677_100008 3300025253 Bacteria 802091
94 Ga0209148_1000019 3300025254 Bacteria 748518
95 Ga0209148_1001600 3300025254 Bacteria 10651
96 Ga0209148_1005572 3300025254 Bacteria 2867
97 Ga0209129_1001280 3300025258 Bacteria 14364
98 Ga0209455_1000011 3300025272 Bacteria 947242
99 Ga0209455_1000426 3300025272 Bacteria 33045
100 Ga0209675_1000026 3300025291 Bacteria 284716
101 Ga0209676_1000059 3300025292 Bacteria 344882
102 Ga0209676_1000100 3300025292 Bacteria 229621
103 Ga0209025_1000066 3300025294 Bacteria 298742
104 Ga0209025_1000178 3300025294 Bacteria 158040
105 Ga0209564_1000084 3300025295 Bacteria 252729
106 Ga0209564_1000161 3300025295 Bacteria 162489
107 Ga0207426_1011256 3300025302 Bacteria 3421
108 Ga0207695_10003041 3300025913 Bacteria 24043
109 Ga0207695_10008848 3300025913 Bacteria 12537
110 Ga0207671_10008809 3300025914 Bacteria 8499
111 Ga0207671_10049120 3300025914 Bacteria 3123
112 Ga0207693_10000847 3300025915 Bacteria 27280
113 Ga0207663_10002592 3300025916 Bacteria 8695
114 Ga0207694_10002294 3300025924 Bacteria 15652
115 Ga0207679_10000002 3300025945 Bacteria 634491
116 Ga0207651_10062010 3300025960 Bacteria 2604
117 Ga0207640_10000222 3300025981 Bacteria 40052
118 Ga0207640_10004319 3300025981 Bacteria 7698
119 Ga0207678_10000018 3300026067 Bacteria 135549
120 Ga0207702_10000053 3300026078 Bacteria 137538
121 Ga0207702_10042388 3300026078 Bacteria 3818
122 Ga0207702_10087797 3300026078 Bacteria 2716
123 Ga0207674_10018998 3300026116 Bacteria 7450
124 Ga0207683_10024129 3300026121 Bacteria 5234
125 Ga0209282_1000155 3300027666 Bacteria 39904
126 Ga0265334_10000927 3300028573 Bacteria 14590
127 Ga0265338_10000636 3300028800 Bacteria 60768
128 Ga0265338_10030048 3300028800 Bacteria 5368
129 Ga0373946_0008544 3300035171 Bacteria 3759
130 Ga0373947_0015356 3300035725 Bacteria 4395
131 Ga0373937_0017194 3300036401 Bacteria 6437
132 Ga0373937_0040503 3300036401 Bacteria 4246
133 Ga0373925_0120514 3300037068 Bacteria 2036
134 Ga0395900_0007478 3300037418 Bacteria 11294
135 Ga0395905_0006081 3300037471 Bacteria 12201
136 Ga0436364_0710836 3300037853 Bacteria 7866
137 Ga0395901_0001403 3300038443 Bacteria 25166
138 Ga0436365_0506456 3300039437 Bacteria 108332
139 Ga0436360_1135922 3300039438 Bacteria 19629
140 Ga0436361_0385217 3300039447 Bacteria 10824
141 Ga0436361_0386114 3300039447 Bacteria 33656
142 Ga0436363_1720012 3300039450 Bacteria 11713
143 Ga0450908_000180 3300042184 Bacteria 12998
144 Ga0466972_0004912 3300044658 Bacteria 6708
145 Ga0466965_0015435 3300044683 Bacteria 3629
146 Ga0466961_0000339 3300044693 Bacteria 30569
147 Ga0466970_0002987 3300044765 Bacteria 8199
148 Ga0466970_0004516 3300044765 Bacteria 6865
149 Ga0466959_0002894 3300045049 Bacteria 11082
150 Ga0466959_0009119 3300045049 Bacteria 7045
151 Ga0451576_0001156 3300045051 Bacteria 47552
152 Ga0466967_0005592 3300045976 Bacteria 8737
153 Ga0466967_0020002 3300045976 Bacteria 5399
154 Ga0495605_0012046 3300046474 Bacteria 4806
155 Ga0495664_0000512 3300046477 Bacteria 19389
156 Ga0495607_0000007 3300046501 Bacteria 272517
157 Ga0495616_0004390 3300046513 Bacteria 8898
158 Ga0495628_0009317 3300046516 Bacteria 8389
159 Ga0495643_0001092 3300046522 Bacteria 26990
160 Ga0495640_0010074 3300046533 Bacteria 7326
161 Ga0495587_0018927 3300046536 Bacteria 4268
162 Ga0495609_0003456 3300046538 Bacteria 9045
163 Ga0495597_0016209 3300046542 Bacteria 3522
164 Ga0495645_0002733 3300046543 Bacteria 11974
165 Ga0495667_0005520 3300046559 Bacteria 8548
166 Ga0495667_0035753 3300046559 Bacteria 3319
167 Ga0495661_0001214 3300046665 Bacteria 22356
168 Ga0495599_0002039 3300046678 Bacteria 11701
169 Ga0495671_0005041 3300046692 Bacteria 7780
170 Ga0495660_0000769 3300046810 Bacteria 24089
171 Ga0495581_0035052 3300047315 Bacteria 2904
172 Ga0495674_0012722 3300047319 Bacteria 7927
173 Ga0495687_012007 3300047443 Bacteria 4609
174 Ga0495675_0024317 3300047444 Bacteria 3861
175 Ga0495675_0049515 3300047444 Bacteria 2671
176 Ga0495673_0000001 3300047469 Bacteria 1630730
177 Ga0495686_0005001 3300047472 Bacteria 10648
178 Ga0495602_0001043 3300048088 Bacteria 27060
179 Ga0496105_0000503 3300048908 Bacteria 25775
180 Ga0496106_0001213 3300048909 Bacteria 19274
181 Ga0496109_0005419 3300048912 Bacteria 10672
182 Ga0496110_0025656 3300048913 Bacteria 5039
183 Ga0496111_0001046 3300048914 Bacteria 15237
184 Ga0496112_0019583 3300048915 Bacteria 6390
185 Ga0496113_0001021 3300048916 Bacteria 15043
186 Ga0496115_0081687 3300048918 Bacteria 2632
187 Ga0496121_0002725 3300048924 Bacteria 26358
188 Ga0496125_0008002 3300048928 Bacteria 11164
189 Ga0501034_0000628 3300049571 Bacteria 54785
190 Ga0501034_0007768 3300049571 Bacteria 11409
191 Ga0501044_0085301 3300049823 Bacteria 3191
192 nmdc:mga0yw44_39119_c1 3300050492 Bacteria 2810
193 Ga0495601_0003151 3300053077 Bacteria 9445
194 Ga0495612_0004292 3300053078 Bacteria 5916
195 Ga0495595_0005836 3300053084 Bacteria 4987
196 Ga0495619_0025314 3300053085 Bacteria 3810
197 Ga0500588_0001197 3300053146 Bacteria 4805
198 Ga0500604_0000186 3300053151 Bacteria 17653
199 Ga0501084_0000243 3300054114 Bacteria 41174
200 Ga0587072_000010 3300059643 Bacteria 12207
201 Ga0501082_0103375 3300060353 Bacteria 2464
202 2511386954 2511231026 Bacteria 5225445
203 2513955690 2513237150 Bacteria 6553639
204 2514041884 2513237165 Bacteria 6771773
205 2521558490 2521172590 Bacteria 5047645
206 2553004123 2551306416 Bacteria 6152985
207 2595445783 2593339238 Bacteria 4182970
208 2595449369 2593339239 Bacteria 4124669
209 2597032453 2596583598 Bacteria 5251611
210 2599447774 2599185178 Bacteria 5365746
211 2600814059 2600255067 Bacteria 6795583
212 2644027464 2643221603 Bacteria 6147767
213 2721027911 2718218334 Bacteria 4765486
214 2735836516 2734482264 Unclassified 5014763
215 2739611524 2739367655 Bacteria 4051151
216 2765569598 2765235838 Bacteria 5445269
217 2821444082 2821443989 Bacteria 7658172
218 2839095520 2839094727 Bacteria 5534556
219 2842776004 2842775625 Bacteria 5587290
220 2857579192 2857576091 Bacteria 5465855
221 2881929042 2881927736 Bacteria 3993927
222 2885266586 2885266251 Bacteria 4796748
223 2887376772 2887375801 Bacteria 5334027
224 2900581046 2900577576 Bacteria 5438534
225 2904444977 2904439833 Bacteria 5931679
226 2904534189 2904530477 Bacteria 5876334
227 2904588969 2904584206 Bacteria 6028872
228 2904590550 2904589729 Bacteria 6113573
229 2904603578 2904601388 Bacteria 5884906
230 2919080411 2919079590 Bacteria 5946433
231 2919405884 2919404418 Bacteria 4232372
232 2923511957 2923510766 Bacteria 5926163
233 2928059557 2928058823 Bacteria 5520022
234 2928131681 2928130867 Bacteria 5467269
235 2929201210 2929199973 Bacteria 7260745
236 641334503 641228493 Bacteria 3999591
237 643390993 643348555 Bacteria 3914947
238 644751398 644736347 Bacteria 6476522
239 8001525541 8001522603 Bacteria 4726425
240 8003403498 8003400568 Bacteria 5535898
241 8055909978 8055909800 Bacteria 7278581
242 JGI25156J39149_1005200
243 JGI24741J21665_1002229
244 JGI24740J21852_10002719
245 JGI25154J39366_1000827
246 JGI25151J46595_10001798
247 JGI25151J46595_10005954
248 Ga0055538_1000002
249 Ga0055539_1000002
250 Ga0055539_1000108
251 Ga0055533_1000004
252 Ga0055533_1001260
253 Ga0055533_1003157
254 Ga0055532_1000073
255 Ga0055525_1000002
256 Ga0055525_1000441
257 Ga0055527_1000411
258 Ga0055535_1000055
259 Ga0055542_1000892
260 Ga0055542_1001571
261 Ga0055529_1000149
262 Ga0055526_1001360
263 Ga0055526_1003851
264 Ga0055536_1000026
265 Ga0055534_1000433
266 Ga0055541_1000002
267 Ga0070683_100029626
268 Ga0070670_100076341
269 Ga0070661_100000061
270 Ga0070669_100021203
271 Ga0070709_10010461
272 Ga0070714_100044120
273 Ga0070713_100005923
274 Ga0070710_10003678
275 Ga0070711_100011075
276 Ga0070663_100000009
277 Ga0070679_100052513
278 Ga0070672_100027463
279 Ga0068855_100017108
280 Ga0070664_100000010
281 Ga0068857_100025294
282 Ga0068854_100000077
283 Ga0068854_100016084
284 Ga0068856_100000045
285 Ga0068852_100030104
286 Ga0081455_10000551
287 Ga0081539_10002330
288 Ga0081539_10040695
289 Ga0070717_10022315
290 Ga0075365_10019841
291 Ga0099826_10000036
292 Ga0105240_10068504
293 Ga0105247_10002060
294 Ga0105238_10004195
295 Ga0105239_10004160
296 Ga0105239_10015665
297 Ga0157373_10004138
298 Ga0157371_10000088
299 Ga0157370_10000041
300 Ga0157370_10033643
301 Ga0157369_10006007
302 Ga0157369_10016799
303 Ga0157372_10000097
304 Ga0163163_10003958
305 Ga0182006_1000027
306 Ga0182006_1000911
307 Ga0182006_1001971
308 Ga0154015_1236682
309 Ga0213872_10001213
310 Ga0213872_10010272
311 Ga0213874_10002943
312 Ga0213876_10000490
313 Ga0213875_10000040
314 Ga0213871_10000269
315 Ga0209784_100002
316 Ga0209784_100008
317 Ga0209566_100003
318 Ga0209566_100006
319 Ga0209566_100992
320 Ga0209674_100004
321 Ga0209674_100045
322 Ga0209674_100116
323 Ga0209674_100891
324 Ga0209674_102692
325 Ga0209672_100128
326 Ga0209147_100005
327 Ga0209563_100006
328 Ga0209563_100016
329 Ga0209437_101239
330 Ga0209258_100007
331 Ga0209646_1000027
332 Ga0209026_1002389
333 Ga0209677_100003
334 Ga0209677_100008
335 Ga0209148_1000019
336 Ga0209148_1001600
337 Ga0209148_1005572
338 Ga0209129_1001280
339 Ga0209455_1000011
340 Ga0209455_1000426
341 Ga0209675_1000026
342 Ga0209676_1000059
343 Ga0209676_1000100
344 Ga0209025_1000066
345 Ga0209025_1000178
346 Ga0209564_1000084
347 Ga0209564_1000161
348 Ga0207426_1011256
349 Ga0207695_10003041
350 Ga0207695_10008848
351 Ga0207671_10008809
352 Ga0207671_10049120
353 Ga0207693_10000847
354 Ga0207663_10002592
355 Ga0207694_10002294
356 Ga0207679_10000002
357 Ga0207651_10062010
358 Ga0207640_10000222
359 Ga0207640_10004319
360 Ga0207678_10000018
361 Ga0207702_10000053
362 Ga0207702_10042388
363 Ga0207702_10087797
364 Ga0207674_10018998
365 Ga0207683_10024129
366 Ga0209282_1000155
367 Ga0265334_10000927
368 Ga0265338_10000636
369 Ga0265338_10030048
370 Ga0373946_0008544
371 Ga0373947_0015356
372 Ga0373937_0017194
373 Ga0373937_0040503
374 Ga0373925_0120514
375 Ga0395900_0007478
376 Ga0395905_0006081
377 Ga0436364_0710836
378 Ga0395901_0001403
379 Ga0436365_0506456
380 Ga0436360_1135922
381 Ga0436361_0385217
382 Ga0436361_0386114
383 Ga0436363_1720012
384 Ga0450908_000180
385 Ga0466972_0004912
386 Ga0466965_0015435
387 Ga0466961_0000339
388 Ga0466970_0002987
389 Ga0466970_0004516
390 Ga0466959_0002894
391 Ga0466959_0009119
392 Ga0451576_0001156
393 Ga0466967_0005592
394 Ga0466967_0020002
395 Ga0495605_0012046
396 Ga0495664_0000512
397 Ga0495607_0000007
398 Ga0495616_0004390
399 Ga0495628_0009317
400 Ga0495643_0001092
401 Ga0495640_0010074
402 Ga0495587_0018927
403 Ga0495609_0003456
404 Ga0495597_0016209
405 Ga0495645_0002733
406 Ga0495667_0005520
407 Ga0495667_0035753
408 Ga0495661_0001214
409 Ga0495599_0002039
410 Ga0495671_0005041
411 Ga0495660_0000769
412 Ga0495581_0035052
413 Ga0495674_0012722
414 Ga0495687_012007
415 Ga0495675_0024317
416 Ga0495675_0049515
417 Ga0495673_0000001
418 Ga0495686_0005001
419 Ga0495602_0001043
420 Ga0496105_0000503
421 Ga0496106_0001213
422 Ga0496109_0005419
423 Ga0496110_0025656
424 Ga0496111_0001046
425 Ga0496112_0019583
426 Ga0496113_0001021
427 Ga0496115_0081687
428 Ga0496121_0002725
429 Ga0496125_0008002
430 Ga0501034_0000628
431 Ga0501034_0007768
432 Ga0501044_0085301
433 nmdc:mga0yw44_39119_c1
434 Ga0495601_0003151
435 Ga0495612_0004292
436 Ga0495595_0005836
437 Ga0495619_0025314
438 Ga0500588_0001197
439 Ga0500604_0000186
440 Ga0501084_0000243
441 Ga0587072_000010
442 Ga0501082_0103375
443 2511386954
444 2513955690
445 2514041884
446 2521558490
447 2553004123
448 2595445783
449 2595449369
450 2597032453
451 2599447774
452 2600814059
453 2644027464
454 2721027911
455 2735836516
456 2739611524
457 2765569598
458 2821444082
459 2839095520
460 2842776004
461 2857579192
462 2881929042
463 2885266586
464 2887376772
465 2900581046
466 2904444977
467 2904534189
468 2904588969
469 2904590550
470 2904603578
471 2919080411
472 2919405884
473 2923511957
474 2928059557
475 2928131681
476 2929201210
477 641334503
478 643390993
479 644751398
480 8001525541
481 8003403498
482 8055909978

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02922

CBM_48

Carbohydrate-binding module 48 (Isoamylase N-terminal domain)

111

199

0.92

PF00128

Alpha-amylase

Alpha amylase, catalytic domain

294

406

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
7u3b-assembly1.cif.gz_H structure of s. venezuelae glgx bound to c-di-gmp and acarbose (ph 8.5) 0.9577 7 697
7u3b-assembly1.cif.gz_C structure of s. venezuelae glgx bound to c-di-gmp and acarbose (ph 8.5) 0.9571 7 698
7u3a-assembly2.cif.gz_D structure of the streptomyces venezuelae glgx-c-di-gmp complex 0.957 7 698
7u3b-assembly4.cif.gz_G structure of s. venezuelae glgx bound to c-di-gmp and acarbose (ph 8.5) 0.9559 7 698
7eav-assembly1.cif.gz_A the x-ray crystallographic structure of glycogen debranching enzyme from sulfolobus solfataricus stb09 0.9554 8 698
ID Description Score Start End Superfamily
2vuyA02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.9717 148 586 3.20.20.80
af_P9WQ25_15_155_2.60.40.10 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.9647 7 146 2.60.40.10
2wskA02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.9619 149 589 3.20.20.80
2vuyA02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.9567 148 586 3.20.20.80
2wskA02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.9533 149 589 3.20.20.80
ID Description Score Start End GO Terms
AF-A0A060BQU1-F1-model_v4 CAZy families CBM48|GH13 protein 0.9955 390 511
AF-A0A520IZC3-F1-model_v4 Glycogen debranching enzyme GlgX 0.9949 1 140 GO:0004553
GO:0005975
AF-A0A3D2M4T1-F1-model_v4 Glycogen debranching enzyme GlgX 0.9945 75 587 GO:0004133
GO:0004553
GO:0005980
AF-A0A4Q5QNT2-F1-model_v4 Glycogen debranching enzyme GlgX 0.9939 30 483 GO:0004133
GO:0004553
GO:0005980
AF-A0A6N9YF89-F1-model_v4 deleted 0.9932 393 499

Map