F353475

General Info

Members Datasets Scaffolds Average Seq Length
241 146 241 354

Family's Representative Sequence

Representative Sequence 3300005333|Ga0070677_10057672|Ga0070677_100576721
Length 374
Sequence MTATLSVETPAPAARAQRIPVGVLGATGSVGQRFVQLLENHPWFRLHELVASERSAGKTYAEAADWRLDTMLPEETSGMTIKSLGADLESVILFSGLDSSVAGEAEEHYANRGAIIVSNSRNHRMDPDVPLLIPELNDDHCAAIEHQRKRRGGKGYIVTNPNCSTIGLAMAIAPIQKQYGIDCLHVTTMQAISGAGYAGVASYAILDNVIPYIGGGEEQKIETEPRKILGTWDGEKFVDASFRISAQVNRVPTIDGHLMTIALSLCNRDELRKVTPIETIIDGIELAIESYIGEPQRLGLPSAPRNPLHYIDADDRPQPRLDRDRESGMSVSIGRLRPDPILDLKMVALVHNTVRGAAGAAILNAELLEAKGLL

Samples

Sample ID Description Type Environment
1 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
2 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
8 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
9 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
10 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
11 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
12 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
13 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
14 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
15 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
16 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
17 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
18 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
19 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
20 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
21 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
22 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
23 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
24 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
25 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
26 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
27 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
28 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
29 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
30 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
31 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
32 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
33 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
34 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
35 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
36 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
37 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
38 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
39 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
40 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
41 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
42 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
43 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
44 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
45 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
46 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
47 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
48 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
49 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
50 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
51 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
52 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
53 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
54 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
55 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
56 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
57 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
58 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
59 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
60 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
61 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
62 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
63 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
64 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
65 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
66 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
67 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
68 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
69 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
70 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
71 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
72 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
73 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
74 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
75 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
76 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
77 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
78 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
79 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
80 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
81 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
82 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
83 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
115 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
118 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
119 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
120 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
121 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
122 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
123 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
124 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
125 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
126 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
127 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
128 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
129 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
130 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
131 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
132 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
133 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
134 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
135 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
136 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
137 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
138 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
139 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
140 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
141 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
142 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
143 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
144 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
145 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
146 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.41
Rhizosphere 97.51
Stem 0
Stem Tuber 0
Unclassified 2.07

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065712_10009177 3300005290 Bacteria 3455
2 Ga0065715_10160225 3300005293 Bacteria 1637
3 Ga0070658_10015931 3300005327 Bacteria 6012
4 Ga0070683_100000110 3300005329 Bacteria 54037
5 Ga0070690_100088729 3300005330 Bacteria 2033
6 Ga0070670_100000094 3300005331 Bacteria 84268
7 Ga0070670_100039197 3300005331 Bacteria 4074
8 Ga0070670_100180314 3300005331 Bacteria 1834
9 Ga0070677_10057672 3300005333 Bacteria 1592
10 Ga0068869_100049227 3300005334 Bacteria 3050
11 Ga0068869_100056992 3300005334 Archaea 2851
12 Ga0070682_100000035 3300005337 Bacteria 150016
13 Ga0068868_100000131 3300005338 Bacteria 48140
14 Ga0068868_100000528 3300005338 Bacteria 25598
15 Ga0070660_100027774 3300005339 Bacteria 4227
16 Ga0070689_100000901 3300005340 Bacteria 18551
17 Ga0070687_100016215 3300005343 Bacteria 3391
18 Ga0070661_100166840 3300005344 Unclassified 1671
19 Ga0070692_10001062 3300005345 Bacteria 9522
20 Ga0070668_100281964 3300005347 Unclassified 1388
21 Ga0070669_100142011 3300005353 Bacteria 1852
22 Ga0070675_100000257 3300005354 Bacteria 34796
23 Ga0070675_100022150 3300005354 Bacteria 5076
24 Ga0070675_100026278 3300005354 Unclassified 4672
25 Ga0070675_100321955 3300005354 Unclassified 1366
26 Ga0070674_100116768 3300005356 Bacteria 1969
27 Ga0070673_100093435 3300005364 Bacteria 2463
28 Ga0070688_100023418 3300005365 Bacteria 3632
29 Ga0070667_100008052 3300005367 Bacteria 8744
30 Ga0070667_100164880 3300005367 Unclassified 1954
31 Ga0070703_10000085 3300005406 Bacteria 47113
32 Ga0070703_10053296 3300005406 Unclassified 1301
33 Ga0070701_10000115 3300005438 Bacteria 23160
34 Ga0070705_100009870 3300005440 Bacteria 4763
35 Ga0070705_100213567 3300005440 Unclassified 1331
36 Ga0070700_100000023 3300005441 Bacteria 129791
37 Ga0070694_100057361 3300005444 Bacteria 2647
38 Ga0070708_100008369 3300005445 Bacteria 8309
39 Ga0070708_100009189 3300005445 Bacteria 7971
40 Ga0070708_100016966 3300005445 Bacteria 6058
41 Ga0070685_10008371 3300005466 Bacteria 5310
42 Ga0070706_100001642 3300005467 Bacteria 23286
43 Ga0070706_100005479 3300005467 Bacteria 12087
44 Ga0070706_100005483 3300005467 Bacteria 12082
45 Ga0070706_100032158 3300005467 Bacteria 4839
46 Ga0070706_100343559 3300005467 Unclassified 1391
47 Ga0070707_100000518 3300005468 Bacteria 38469
48 Ga0070707_100005526 3300005468 Bacteria 11818
49 Ga0070707_100036944 3300005468 Bacteria 4661
50 Ga0070707_100044567 3300005468 Bacteria 4247
51 Ga0070707_100118860 3300005468 Bacteria 2565
52 Ga0070707_100198529 3300005468 Bacteria 1955
53 Ga0070707_100441180 3300005468 Unclassified 1262
54 Ga0070698_100001385 3300005471 Bacteria 26872
55 Ga0070698_100030930 3300005471 Bacteria 5552
56 Ga0070698_100097171 3300005471 Bacteria 2921
57 Ga0070698_100170256 3300005471 Unclassified 2119
58 Ga0070698_100271470 3300005471 Bacteria 1627
59 Ga0070699_100011118 3300005518 Bacteria 7779
60 Ga0070699_100264761 3300005518 Bacteria 1538
61 Ga0070684_100001363 3300005535 Bacteria 17522
62 Ga0070684_100153802 3300005535 Unclassified 2085
63 Ga0070697_100015936 3300005536 Bacteria 5907
64 Ga0070697_100027064 3300005536 Unclassified 4586
65 Ga0070697_100028753 3300005536 Unclassified 4453
66 Ga0070697_100084208 3300005536 Bacteria 2622
67 Ga0068853_100031865 3300005539 Bacteria 4462
68 Ga0068853_100125959 3300005539 Unclassified 2288
69 Ga0070672_100000295 3300005543 Bacteria 28160
70 Ga0070686_100040419 3300005544 Bacteria 2909
71 Ga0070695_100033031 3300005545 Unclassified 3237
72 Ga0070695_100238225 3300005545 Bacteria 1319
73 Ga0070695_100255942 3300005545 Unclassified 1276
74 Ga0070665_100051506 3300005548 Unclassified 4129
75 Ga0070704_100001201 3300005549 Bacteria 13576
76 Ga0070664_100078745 3300005564 Bacteria 2835
77 Ga0068854_100051004 3300005578 Bacteria 2963
78 Ga0068859_100010466 3300005617 Bacteria 9332
79 Ga0068859_100010586 3300005617 Bacteria 9285
80 Ga0068859_100016406 3300005617 Bacteria 7440
81 Ga0068864_100000007 3300005618 Bacteria 392187
82 Ga0068861_100121587 3300005719 Bacteria 2107
83 Ga0068861_100349827 3300005719 Bacteria 1296
84 Ga0068863_100020199 3300005841 Bacteria 6372
85 Ga0068858_100000710 3300005842 Bacteria 34761
86 Ga0068860_100453666 3300005843 Bacteria 1275
87 Ga0097621_100027410 3300006237 Unclassified 4479
88 Ga0075428_100064693 3300006844 Bacteria 4006
89 Ga0075428_100118407 3300006844 Unclassified 2884
90 Ga0075431_100007942 3300006847 Bacteria 10575
91 Ga0075433_10002429 3300006852 Bacteria 14172
92 Ga0075433_10036415 3300006852 Unclassified 4239
93 Ga0075433_10150439 3300006852 Unclassified 2071
94 Ga0075434_100005857 3300006871 Bacteria 11225
95 Ga0075434_100010532 3300006871 Bacteria 8674
96 Ga0075434_100045345 3300006871 Bacteria 4361
97 Ga0075434_100069706 3300006871 Bacteria 3506
98 Ga0075429_100076939 3300006880 Bacteria 2906
99 Ga0075436_100005643 3300006914 Bacteria 8589
100 Ga0075436_100031369 3300006914 Bacteria 3659
101 Ga0075436_100232340 3300006914 Unclassified 1310
102 Ga0097620_100010466 3300006931 Bacteria 9332
103 Ga0097620_100010586 3300006931 Bacteria 9285
104 Ga0097620_100016406 3300006931 Bacteria 7440
105 Ga0075435_100072262 3300007076 Bacteria 2818
106 Ga0099794_10004168 3300007265 Bacteria 5639
107 Ga0105240_10011345 3300009093 Bacteria 12412
108 Ga0105240_10065148 3300009093 Unclassified 4524
109 Ga0111539_10006781 3300009094 Bacteria 14737
110 Ga0111539_10151979 3300009094 Bacteria 2710
111 Ga0111539_10155939 3300009094 Unclassified 2672
112 Ga0111539_10381094 3300009094 Unclassified 1642
113 Ga0105245_10000071 3300009098 Bacteria 106492
114 Ga0105245_10182116 3300009098 Bacteria 2008
115 Ga0114129_10027420 3300009147 Bacteria 8064
116 Ga0114129_10295468 3300009147 Unclassified 2161
117 Ga0114129_10367947 3300009147 Bacteria 1901
118 Ga0105243_10000128 3300009148 Bacteria 85995
119 Ga0105243_10104669 3300009148 Unclassified 2356
120 Ga0105242_10000046 3300009176 Bacteria 81672
121 Ga0105242_10016943 3300009176 Bacteria 5671
122 Ga0105248_10000718 3300009177 Bacteria 37517
123 Ga0105248_10158610 3300009177 Bacteria 2553
124 Ga0105238_10000030 3300009551 Bacteria 181972
125 Ga0105249_10107277 3300009553 Unclassified 2636
126 Ga0105246_10082370 3300011119 Unclassified 2296
127 Ga0157369_10000577 3300013105 Bacteria 47968
128 Ga0157374_10000020 3300013296 Bacteria 276902
129 Ga0157378_10000817 3300013297 Bacteria 28974
130 Ga0157378_10002890 3300013297 Bacteria 15295
131 Ga0157378_10019150 3300013297 Bacteria 6014
132 Ga0157378_10251316 3300013297 Bacteria 1693
133 Ga0163162_10005505 3300013306 Bacteria 12239
134 Ga0157375_10000003 3300013308 Bacteria 476325
135 Ga0157375_10000148 3300013308 Bacteria 68603
136 Ga0157375_10000787 3300013308 Bacteria 27686
137 Ga0157375_10086844 3300013308 Unclassified 3180
138 Ga0163163_10010444 3300014325 Bacteria 8353
139 Ga0157380_10007511 3300014326 Bacteria 7742
140 Ga0157377_10000031 3300014745 Bacteria 124109
141 Ga0157379_10030968 3300014968 Unclassified 4766
142 Ga0157376_10000003 3300014969 Bacteria 568634
143 Ga0163161_10000948 3300017792 Bacteria 22261
144 Ga0163161_10200068 3300017792 Unclassified 1539
145 Ga0163161_10264061 3300017792 Unclassified 1345
146 Ga0213873_10001323 3300021358 Archaea 4084
147 Ga0213876_10000045 3300021384 Bacteria 151827
148 Ga0213876_10008081 3300021384 Bacteria 5703
149 Ga0207653_10027720 3300025885 Bacteria 1818
150 Ga0207682_10025231 3300025893 Bacteria 2357
151 Ga0207705_10012885 3300025909 Bacteria 6037
152 Ga0207684_10014584 3300025910 Bacteria 6771
153 Ga0207684_10050586 3300025910 Unclassified 3525
154 Ga0207684_10117878 3300025910 Bacteria 2275
155 Ga0207684_10291380 3300025910 Bacteria 1407
156 Ga0207695_10013990 3300025913 Bacteria 9532
157 Ga0207695_10146347 3300025913 Bacteria 2306
158 Ga0207662_10032284 3300025918 Bacteria 3047
159 Ga0207649_10128692 3300025920 Unclassified 1717
160 Ga0207646_10002273 3300025922 Bacteria 22857
161 Ga0207646_10003379 3300025922 Bacteria 18052
162 Ga0207646_10003501 3300025922 Bacteria 17700
163 Ga0207646_10028940 3300025922 Bacteria 5040
164 Ga0207646_10245258 3300025922 Bacteria 1618
165 Ga0207694_10000002 3300025924 Bacteria 1165763
166 Ga0207694_10000003 3300025924 Bacteria 1165533
167 Ga0207650_10000101 3300025925 Bacteria 112066
168 Ga0207650_10022113 3300025925 Bacteria 4501
169 Ga0207659_10002422 3300025926 Bacteria 11116
170 Ga0207659_10003158 3300025926 Bacteria 9849
171 Ga0207659_10013051 3300025926 Bacteria 5310
172 Ga0207687_10000009 3300025927 Bacteria 443946
173 Ga0207687_10087482 3300025927 Bacteria 2264
174 Ga0207644_10016075 3300025931 Bacteria 5032
175 Ga0207686_10000009 3300025934 Bacteria 241706
176 Ga0207686_10033633 3300025934 Bacteria 3062
177 Ga0207709_10000048 3300025935 Bacteria 238474
178 Ga0207709_10062588 3300025935 Unclassified 2329
179 Ga0207670_10053750 3300025936 Bacteria 2715
180 Ga0207665_10003330 3300025939 Bacteria 10767
181 Ga0207665_10018336 3300025939 Bacteria 4599
182 Ga0207691_10011352 3300025940 Bacteria 8549
183 Ga0207711_10007876 3300025941 Bacteria 8913
184 Ga0207689_10053146 3300025942 Archaea 3337
185 Ga0207661_10000022 3300025944 Bacteria 198514
186 Ga0207679_10072511 3300025945 Bacteria 2601
187 Ga0207651_10020586 3300025960 Bacteria 3986
188 Ga0207658_10021884 3300025986 Unclassified 4445
189 Ga0207677_10000001 3300026023 Bacteria 534789
190 Ga0207677_10000132 3300026023 Bacteria 61373
191 Ga0207703_10000249 3300026035 Bacteria 60645
192 Ga0207639_10000013 3300026041 Bacteria 293084
193 Ga0207708_10000027 3300026075 Bacteria 166457
194 Ga0207641_10000798 3300026088 Bacteria 33681
195 Ga0207676_10000015 3300026095 Bacteria 329100
196 Ga0207675_100139535 3300026118 Bacteria 2302
197 Ga0207675_100417528 3300026118 Bacteria 1324
198 Ga0207428_10004100 3300027907 Bacteria 13957
199 Ga0268266_10191412 3300028379 Bacteria 1868
200 Ga0268264_10069604 3300028381 Bacteria 2976
201 Ga0307410_10033684 3300031852 Unclassified 3309
202 Ga0307407_10000406 3300031903 Bacteria 13084
203 Ga0307409_100429577 3300031995 Archaea 1269
204 Ga0307416_100104982 3300032002 Bacteria 2472
205 Ga0307411_10002060 3300032005 Bacteria 8637
206 Ga0373943_0007026 3300035170 Bacteria 5049
207 Ga0373931_0251821 3300035691 Unclassified 1074
208 Ga0373937_0187660 3300036401 Bacteria 1942
209 Ga0395905_0107288 3300037471 Bacteria 2622
210 Ga0395901_0406525 3300038443 Unclassified 1398
211 Ga0436365_0457873 3300039437 Unclassified 2800
212 Ga0436365_0721783 3300039437 Bacteria 24143
213 Ga0436365_0803500 3300039437 Archaea 2140
214 Ga0436362_0071827 3300039453 Bacteria 11272
215 Ga0466960_0130312 3300044901 Bacteria 1326
216 Ga0495638_0019194 3300046460 Bacteria 4526
217 Ga0495586_0010616 3300046535 Bacteria 4901
218 Ga0495598_0007657 3300046537 Bacteria 2486
219 Ga0495645_0200990 3300046543 Unclassified 1352
220 Ga0495658_0040337 3300046683 Bacteria 2595
221 Ga0495613_0026631 3300046689 Bacteria 4307
222 Ga0495636_0077563 3300047318 Unclassified 1426
223 Ga0495672_0009322 3300047320 Bacteria 7126
224 Ga0496104_0097665 3300048907 Unclassified 2811
225 nmdc:mga05p37_455540_c1 3300050507 Bacteria 1479
226 nmdc:mga05p37_54193_c1 3300050507 Bacteria 4934
227 nmdc:mga05p37_55425_c1 3300050507 Bacteria 4878
228 nmdc:mga06r32_115661_c1 3300050510 Unclassified 2642
229 nmdc:mga06r32_1780_c1 3300050510 Bacteria 19344
230 nmdc:mga06r32_517301_c1 3300050510 Unclassified 1169
231 nmdc:mga08y16_12880_c1 3300050511 Bacteria 8795
232 nmdc:mga08y16_205149_c1 3300050511 Unclassified 2043
233 nmdc:mga0n895_21796_c1 3300050512 Bacteria 5997
234 nmdc:mga0n895_222320_c1 3300050512 Bacteria 1917
235 nmdc:mga0n895_38180_c1 3300050512 Bacteria 4652
236 nmdc:mga0n895_5192_c1 3300050512 Bacteria 10836
237 nmdc:mga0rr50_456671_c1 3300050513 Unclassified 1083
238 nmdc:mga08x19_2612_c1 3300050514 Bacteria 10932
239 nmdc:mga0a205_375814_c1 3300050515 Unclassified 1287
240 nmdc:mga0a205_65932_c1 3300050515 Bacteria 3499
241 Ga0530510_0132896 3300061734 Bacteria 1831

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300035691 Ga0373931_0251821 Ga0373931_0251821_183_1049 280
2 3300031903 Ga0307407_10000406 Ga0307407_1000040613 304
3 3300032005 Ga0307411_10002060 Ga0307411_100020606 304
4 3300038443 Ga0395901_0406525 Ga0395901_0406525_419_1375 310
5 3300046535 Ga0495586_0010616 Ga0495586_0010616_202_1218 312
6 3300046683 Ga0495658_0040337 Ga0495658_0040337_316_1332 312
7 3300050513 nmdc:mga0rr50_456671_c1 nmdc:mga0rr50_456671_c1_30_1028 315
8 3300061734 Ga0530510_0132896 Ga0530510_0132896_35_1036 318
9 3300037471 Ga0395905_0107288 Ga0395905_0107288_1534_2523 321
10 3300009147 Ga0114129_10027420 Ga0114129_100274203 325
11 3300046543 Ga0495645_0200990 Ga0495645_0200990_229_1230 325
12 3300050507 nmdc:mga05p37_55425_c1 nmdc:mga05p37_55425_c1_3838_4839 325
13 3300011119 Ga0105246_10082370 Ga0105246_100823702 326
14 3300005343 Ga0070687_100016215 Ga0070687_1000162152 329
15 3300025918 Ga0207662_10032284 Ga0207662_100322842 329
16 3300006871 Ga0075434_100069706 Ga0075434_1000697064 330
17 3300017792 Ga0163161_10264061 Ga0163161_102640612 330
18 3300036401 Ga0373937_0187660 Ga0373937_0187660_500_1516 330
19 3300046689 Ga0495613_0026631 Ga0495613_0026631_462_1478 330
20 3300050512 nmdc:mga0n895_222320_c1 nmdc:mga0n895_222320_c1_282_1334 330
21 3300009093 Ga0105240_10065148 Ga0105240_100651484 332
22 3300044901 Ga0466960_0130312 Ga0466960_0130312_158_1252 332
23 3300005334 Ga0068869_100049227 Ga0068869_1000492272 333
24 3300009098 Ga0105245_10182116 Ga0105245_101821162 333
25 3300025927 Ga0207687_10087482 Ga0207687_100874822 333
26 3300005339 Ga0070660_100027774 Ga0070660_1000277743 334
27 3300005367 Ga0070667_100164880 Ga0070667_1001648802 334
28 3300005468 Ga0070707_100036944 Ga0070707_1000369445 334
29 3300005719 Ga0068861_100349827 Ga0068861_1003498272 334
30 3300017792 Ga0163161_10000948 Ga0163161_1000094811 334
31 3300025922 Ga0207646_10003379 Ga0207646_1000337910 334
32 3300026118 Ga0207675_100417528 Ga0207675_1004175282 334
33 3300031852 Ga0307410_10033684 Ga0307410_100336842 334
34 3300005471 Ga0070698_100271470 Ga0070698_1002714701 335
35 3300005545 Ga0070695_100238225 Ga0070695_1002382252 335
36 3300025939 Ga0207665_10018336 Ga0207665_100183364 335
37 3300005445 Ga0070708_100009189 Ga0070708_1000091896 336
38 3300005536 Ga0070697_100084208 Ga0070697_1000842082 336
39 3300013297 Ga0157378_10251316 Ga0157378_102513162 336
40 3300039437 Ga0436365_0721783 Ga0436365_0721783_22548_23585 336
41 3300039453 Ga0436362_0071827 Ga0436362_0071827_5167_6204 336
42 3300005406 Ga0070703_10053296 Ga0070703_100532961 337
43 3300005438 Ga0070701_10000115 Ga0070701_1000011525 337
44 3300005440 Ga0070705_100213567 Ga0070705_1002135671 337
45 3300005444 Ga0070694_100057361 Ga0070694_1000573613 337
46 3300005445 Ga0070708_100008369 Ga0070708_1000083694 337
47 3300005467 Ga0070706_100005479 Ga0070706_10000547917 337
48 3300005467 Ga0070706_100343559 Ga0070706_1003435591 337
49 3300005468 Ga0070707_100441180 Ga0070707_1004411801 337
50 3300005471 Ga0070698_100030930 Ga0070698_1000309302 337
51 3300005518 Ga0070699_100011118 Ga0070699_1000111182 337
52 3300005536 Ga0070697_100015936 Ga0070697_1000159362 337
53 3300005545 Ga0070695_100255942 Ga0070695_1002559421 337
54 3300005549 Ga0070704_100001201 Ga0070704_10000120112 337
55 3300006844 Ga0075428_100064693 Ga0075428_1000646935 337
56 3300006847 Ga0075431_100007942 Ga0075431_1000079424 337
57 3300006852 Ga0075433_10002429 Ga0075433_1000242918 337
58 3300006852 Ga0075433_10150439 Ga0075433_101504392 337
59 3300006871 Ga0075434_100005857 Ga0075434_10000585715 337
60 3300006871 Ga0075434_100045345 Ga0075434_1000453452 337
61 3300006914 Ga0075436_100005643 Ga0075436_1000056435 337
62 3300006914 Ga0075436_100031369 Ga0075436_1000313691 337
63 3300007076 Ga0075435_100072262 Ga0075435_1000722622 337
64 3300025910 Ga0207684_10014584 Ga0207684_100145846 337
65 3300025922 Ga0207646_10003501 Ga0207646_1000350112 337
66 3300025939 Ga0207665_10003330 Ga0207665_1000333010 337
67 3300050510 nmdc:mga06r32_1780_c1 nmdc:mga06r32_1780_c1_2558_3646 337
68 3300050512 nmdc:mga0n895_38180_c1 nmdc:mga0n895_38180_c1_3382_4428 337
69 3300050512 nmdc:mga0n895_5192_c1 nmdc:mga0n895_5192_c1_1278_2324 337
70 3300050514 nmdc:mga08x19_2612_c1 nmdc:mga08x19_2612_c1_9667_10713 337
71 3300050515 nmdc:mga0a205_375814_c1 nmdc:mga0a205_375814_c1_152_1198 337
72 3300050515 nmdc:mga0a205_65932_c1 nmdc:mga0a205_65932_c1_1564_2610 337
73 3300005327 Ga0070658_10015931 Ga0070658_100159315 338
74 3300005329 Ga0070683_100000110 Ga0070683_10000011034 338
75 3300005331 Ga0070670_100000094 Ga0070670_10000009461 338
76 3300005331 Ga0070670_100180314 Ga0070670_1001803143 338
77 3300005334 Ga0068869_100056992 Ga0068869_1000569922 338
78 3300005338 Ga0068868_100000131 Ga0068868_10000013127 338
79 3300005345 Ga0070692_10001062 Ga0070692_100010625 338
80 3300005441 Ga0070700_100000023 Ga0070700_10000002374 338
81 3300005467 Ga0070706_100005483 Ga0070706_1000054832 338
82 3300005468 Ga0070707_100000518 Ga0070707_1000005184 338
83 3300005468 Ga0070707_100005526 Ga0070707_10000552610 338
84 3300005468 Ga0070707_100044567 Ga0070707_1000445673 338
85 3300005468 Ga0070707_100118860 Ga0070707_1001188602 338
86 3300005468 Ga0070707_100198529 Ga0070707_1001985292 338
87 3300005471 Ga0070698_100001385 Ga0070698_10000138521 338
88 3300005471 Ga0070698_100170256 Ga0070698_1001702562 338
89 3300005518 Ga0070699_100264761 Ga0070699_1002647611 338
90 3300005535 Ga0070684_100001363 Ga0070684_1000013633 338
91 3300005536 Ga0070697_100027064 Ga0070697_1000270642 338
92 3300005536 Ga0070697_100028753 Ga0070697_1000287534 338
93 3300005539 Ga0068853_100031865 Ga0068853_1000318654 338
94 3300005539 Ga0068853_100125959 Ga0068853_1001259592 338
95 3300005543 Ga0070672_100000295 Ga0070672_10000029521 338
96 3300005545 Ga0070695_100033031 Ga0070695_1000330313 338
97 3300005578 Ga0068854_100051004 Ga0068854_1000510042 338
98 3300009093 Ga0105240_10011345 Ga0105240_1001134511 338
99 3300009094 Ga0111539_10381094 Ga0111539_103810941 338
100 3300009098 Ga0105245_10000071 Ga0105245_1000007181 338
101 3300009551 Ga0105238_10000030 Ga0105238_10000030126 338
102 3300013105 Ga0157369_10000577 Ga0157369_1000057742 338
103 3300013296 Ga0157374_10000020 Ga0157374_10000020226 338
104 3300013297 Ga0157378_10000817 Ga0157378_1000081715 338
105 3300013297 Ga0157378_10002890 Ga0157378_1000289013 338
106 3300013297 Ga0157378_10019150 Ga0157378_100191503 338
107 3300013308 Ga0157375_10000003 Ga0157375_10000003289 338
108 3300013308 Ga0157375_10000148 Ga0157375_1000014851 338
109 3300013308 Ga0157375_10000787 Ga0157375_1000078725 338
110 3300014326 Ga0157380_10007511 Ga0157380_100075119 338
111 3300014745 Ga0157377_10000031 Ga0157377_1000003171 338
112 3300014969 Ga0157376_10000003 Ga0157376_1000000336 338
113 3300021358 Ga0213873_10001323 Ga0213873_100013234 338
114 3300021384 Ga0213876_10000045 Ga0213876_100000456 338
115 3300021384 Ga0213876_10008081 Ga0213876_100080812 338
116 3300025885 Ga0207653_10027720 Ga0207653_100277202 338
117 3300025909 Ga0207705_10012885 Ga0207705_100128855 338
118 3300025910 Ga0207684_10291380 Ga0207684_102913802 338
119 3300025913 Ga0207695_10013990 Ga0207695_100139902 338
120 3300025922 Ga0207646_10002273 Ga0207646_100022734 338
121 3300025922 Ga0207646_10028940 Ga0207646_100289403 338
122 3300025924 Ga0207694_10000002 Ga0207694_100000021052 338
123 3300025924 Ga0207694_10000003 Ga0207694_1000000348 338
124 3300025925 Ga0207650_10000101 Ga0207650_1000010161 338
125 3300025925 Ga0207650_10022113 Ga0207650_100221133 338
126 3300025927 Ga0207687_10000009 Ga0207687_1000000983 338
127 3300025942 Ga0207689_10053146 Ga0207689_100531463 338
128 3300025944 Ga0207661_10000022 Ga0207661_10000022133 338
129 3300026023 Ga0207677_10000132 Ga0207677_1000013224 338
130 3300026041 Ga0207639_10000013 Ga0207639_10000013218 338
131 3300026075 Ga0207708_10000027 Ga0207708_10000027151 338
132 3300031995 Ga0307409_100429577 Ga0307409_1004295771 338
133 3300032002 Ga0307416_100104982 Ga0307416_1001049822 338
134 3300035170 Ga0373943_0007026 Ga0373943_0007026_1203_2300 338
135 3300039437 Ga0436365_0803500 Ga0436365_0803500_479_1576 338
136 3300047318 Ga0495636_0077563 Ga0495636_0077563_353_1405 338
137 3300005333 Ga0070677_10057672 Ga0070677_100576721 339
138 3300005337 Ga0070682_100000035 Ga0070682_10000003565 339
139 3300005338 Ga0068868_100000528 Ga0068868_10000052827 339
140 3300005340 Ga0070689_100000901 Ga0070689_10000090112 339
141 3300005364 Ga0070673_100093435 Ga0070673_1000934352 339
142 3300005440 Ga0070705_100009870 Ga0070705_1000098703 339
143 3300005445 Ga0070708_100016966 Ga0070708_1000169665 339
144 3300005467 Ga0070706_100001642 Ga0070706_1000016424 339
145 3300005467 Ga0070706_100032158 Ga0070706_1000321582 339
146 3300005471 Ga0070698_100097171 Ga0070698_1000971711 339
147 3300005618 Ga0068864_100000007 Ga0068864_10000000795 339
148 3300005842 Ga0068858_100000710 Ga0068858_10000071020 339
149 3300006852 Ga0075433_10036415 Ga0075433_100364152 339
150 3300006871 Ga0075434_100010532 Ga0075434_1000105323 339
151 3300009148 Ga0105243_10104669 Ga0105243_101046693 339
152 3300025893 Ga0207682_10025231 Ga0207682_100252311 339
153 3300025910 Ga0207684_10050586 Ga0207684_100505861 339
154 3300025910 Ga0207684_10117878 Ga0207684_101178782 339
155 3300025922 Ga0207646_10245258 Ga0207646_102452581 339
156 3300025935 Ga0207709_10062588 Ga0207709_100625882 339
157 3300025960 Ga0207651_10020586 Ga0207651_100205864 339
158 3300026023 Ga0207677_10000001 Ga0207677_10000001326 339
159 3300026035 Ga0207703_10000249 Ga0207703_1000024946 339
160 3300026095 Ga0207676_10000015 Ga0207676_10000015235 339
161 3300039437 Ga0436365_0457873 Ga0436365_0457873_259_1365 339
162 3300046460 Ga0495638_0019194 Ga0495638_0019194_1244_2296 339
163 3300047320 Ga0495672_0009322 Ga0495672_0009322_5807_6862 339
164 3300005330 Ga0070690_100088729 Ga0070690_1000887292 340
165 3300005331 Ga0070670_100039197 Ga0070670_1000391974 340
166 3300005344 Ga0070661_100166840 Ga0070661_1001668402 340
167 3300005347 Ga0070668_100281964 Ga0070668_1002819642 340
168 3300005353 Ga0070669_100142011 Ga0070669_1001420111 340
169 3300005354 Ga0070675_100000257 Ga0070675_1000002573 340
170 3300005354 Ga0070675_100022150 Ga0070675_1000221503 340
171 3300005354 Ga0070675_100026278 Ga0070675_1000262783 340
172 3300005354 Ga0070675_100321955 Ga0070675_1003219552 340
173 3300005356 Ga0070674_100116768 Ga0070674_1001167682 340
174 3300005365 Ga0070688_100023418 Ga0070688_1000234183 340
175 3300005367 Ga0070667_100008052 Ga0070667_1000080524 340
176 3300005406 Ga0070703_10000085 Ga0070703_100000852 340
177 3300005466 Ga0070685_10008371 Ga0070685_100083714 340
178 3300005535 Ga0070684_100153802 Ga0070684_1001538022 340
179 3300005544 Ga0070686_100040419 Ga0070686_1000404192 340
180 3300005548 Ga0070665_100051506 Ga0070665_1000515063 340
181 3300005564 Ga0070664_100078745 Ga0070664_1000787452 340
182 3300005617 Ga0068859_100010466 Ga0068859_1000104662 340
183 3300005617 Ga0068859_100010586 Ga0068859_1000105862 340
184 3300005617 Ga0068859_100016406 Ga0068859_1000164062 340
185 3300005719 Ga0068861_100121587 Ga0068861_1001215872 340
186 3300005841 Ga0068863_100020199 Ga0068863_1000201992 340
187 3300005843 Ga0068860_100453666 Ga0068860_1004536662 340
188 3300006237 Ga0097621_100027410 Ga0097621_1000274102 340
189 3300006844 Ga0075428_100118407 Ga0075428_1001184072 340
190 3300006880 Ga0075429_100076939 Ga0075429_1000769393 340
191 3300006914 Ga0075436_100232340 Ga0075436_1002323402 340
192 3300006931 Ga0097620_100010466 Ga0097620_1000104662 340
193 3300006931 Ga0097620_100010586 Ga0097620_1000105869 340
194 3300006931 Ga0097620_100016406 Ga0097620_1000164062 340
195 3300007265 Ga0099794_10004168 Ga0099794_100041682 340
196 3300009094 Ga0111539_10006781 Ga0111539_100067816 340
197 3300009094 Ga0111539_10151979 Ga0111539_101519793 340
198 3300009094 Ga0111539_10155939 Ga0111539_101559391 340
199 3300009147 Ga0114129_10295468 Ga0114129_102954682 340
200 3300009147 Ga0114129_10367947 Ga0114129_103679472 340
201 3300009148 Ga0105243_10000128 Ga0105243_100001281 340
202 3300009176 Ga0105242_10000046 Ga0105242_100000461 340
203 3300009176 Ga0105242_10016943 Ga0105242_100169433 340
204 3300009177 Ga0105248_10000718 Ga0105248_1000071836 340
205 3300009177 Ga0105248_10158610 Ga0105248_101586101 340
206 3300009553 Ga0105249_10107277 Ga0105249_101072772 340
207 3300013306 Ga0163162_10005505 Ga0163162_100055058 340
208 3300013308 Ga0157375_10086844 Ga0157375_100868443 340
209 3300014325 Ga0163163_10010444 Ga0163163_100104446 340
210 3300014968 Ga0157379_10030968 Ga0157379_100309682 340
211 3300017792 Ga0163161_10200068 Ga0163161_102000682 340
212 3300025920 Ga0207649_10128692 Ga0207649_101286922 340
213 3300025926 Ga0207659_10002422 Ga0207659_100024223 340
214 3300025926 Ga0207659_10003158 Ga0207659_100031588 340
215 3300025926 Ga0207659_10013051 Ga0207659_100130513 340
216 3300025931 Ga0207644_10016075 Ga0207644_100160754 340
217 3300025934 Ga0207686_10000009 Ga0207686_1000000966 340
218 3300025934 Ga0207686_10033633 Ga0207686_100336332 340
219 3300025935 Ga0207709_10000048 Ga0207709_10000048134 340
220 3300025936 Ga0207670_10053750 Ga0207670_100537502 340
221 3300025940 Ga0207691_10011352 Ga0207691_100113527 340
222 3300025941 Ga0207711_10007876 Ga0207711_100078766 340
223 3300025945 Ga0207679_10072511 Ga0207679_100725112 340
224 3300025986 Ga0207658_10021884 Ga0207658_100218843 340
225 3300026088 Ga0207641_10000798 Ga0207641_1000079830 340
226 3300026118 Ga0207675_100139535 Ga0207675_1001395352 340
227 3300027907 Ga0207428_10004100 Ga0207428_1000410011 340
228 3300028379 Ga0268266_10191412 Ga0268266_101914122 340
229 3300028381 Ga0268264_10069604 Ga0268264_100696042 340
230 3300046537 Ga0495598_0007657 Ga0495598_0007657_959_2017 340
231 3300048907 Ga0496104_0097665 Ga0496104_0097665_659_1714 340
232 3300050507 nmdc:mga05p37_455540_c1 nmdc:mga05p37_455540_c1_124_1233 340
233 3300050507 nmdc:mga05p37_54193_c1 nmdc:mga05p37_54193_c1_1025_2080 340
234 3300050510 nmdc:mga06r32_115661_c1 nmdc:mga06r32_115661_c1_898_1953 340
235 3300050510 nmdc:mga06r32_517301_c1 nmdc:mga06r32_517301_c1_63_1118 340
236 3300050511 nmdc:mga08y16_12880_c1 nmdc:mga08y16_12880_c1_7007_8065 340
237 3300050511 nmdc:mga08y16_205149_c1 nmdc:mga08y16_205149_c1_567_1625 340
238 3300050512 nmdc:mga0n895_21796_c1 nmdc:mga0n895_21796_c1_3307_4362 340
239 3300025913 Ga0207695_10146347 Ga0207695_101463472 342
240 3300005290 Ga0065712_10009177 Ga0065712_100091773 343
241 3300005293 Ga0065715_10160225 Ga0065715_101602252 343

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01118

Semialdhyde_dh

Semialdehyde dehydrogenase, NAD binding domain

20

144

0.92

PF02774

Semialdhyde_dhC

Semialdehyde dehydrogenase, dimerisation domain

172

355

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
4zic-assembly2.cif.gz_E crystal structure of aspartate semialdehyde dehydrogenase with nadp from trichophyton rubrum 0.9534 2 338
6c8w-assembly1.cif.gz_A crystal structure of aspartate semialdehyde dehydrogenase with nadp from blastomyces dermatitidis 0.9524 2 338
4zic-assembly1.cif.gz_D crystal structure of aspartate semialdehyde dehydrogenase with nadp from trichophyton rubrum 0.9514 2 338
4zhs-assembly1.cif.gz_D crystal structure of aspartate semialdehyde dehydrogenase from trichophyton rubrum 0.9514 2 338
1ys4-assembly1.cif.gz_A structure of aspartate-semialdehyde dehydrogenase from methanococcus jannaschii 0.9495 1 336
ID Description Score Start End Superfamily
af_P78780_5_150_3.30.360.10 Alpha Beta;2-Layer Sandwich;Dihydrodipicolinate Reductase; domain 2;Dihydrodipicolinate Reductase; domain 2 0.9823 3 144 3.30.360.10
af_Q57658_3_151_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9755 1 139 3.40.50.720
4dpkC01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9538 1 143 3.40.50.720
af_P78780_5_150_3.30.360.10 Alpha Beta;2-Layer Sandwich;Dihydrodipicolinate Reductase; domain 2;Dihydrodipicolinate Reductase; domain 2 0.9494 3 144 3.30.360.10
2ep5C01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9439 1 147 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A831U3J7-F1-model_v4 Aspartate-semialdehyde dehydrogenase 0.9988 1 81 GO:0004073
GO:0009086
GO:0009088
GO:0051287
AF-A0A523HK59-F1-model_v4 Aspartate-semialdehyde dehydrogenase 0.9963 1 64 GO:0004073
GO:0009086
GO:0009088
GO:0051287
AF-A0A359ICG9-F1-model_v4 Semialdehyde dehydrogenase NAD-binding domain-containing protein 0.9961 1 84 GO:0004073
GO:0009086
GO:0009088
GO:0051287
AF-A0A3R7VUI8-F1-model_v4 Aspartate-semialdehyde dehydrogenase 0.9952 1 65 GO:0004073
GO:0009086
GO:0009088
GO:0051287
AF-A0A2V7GTZ4-F1-model_v4 Aspartate-semialdehyde dehydrogenase 0.9945 1 104 GO:0004073
GO:0009086
GO:0009088
GO:0051287

Feature Viewer

pLDDT pTM Quality
89.69 0.9 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar

Map