F353518

General Info

Members Datasets Scaffolds Average Seq Length
241 155 240 285

Family's Representative Sequence

Representative Sequence 3300005367|Ga0070667_100000872|Ga0070667_10000087217
Length 305
Sequence MCHAARRSAPGVRHHPALCDDDAAEPDPTMNQSRLRAALLMCALLAPTAQAADLPQQRLAPGGVARIALGTSAEAPRASYHGVPVLVLRDRGQWTAVLGIALAATPGRAVLTLQRGDAAPTELPFTIKPFHYAEQRLSVAPGQVDLSPQDLARYERERAHLAAVVATFGSTGPETLRLRQPVPGARSSSFGLRRVFNGQSRNPHSGMDIAAPLGTPVVAAAAGTVIDTGDYFFNGNTVWIDHGTGLMTMYCHLSAISVAVGDTVAAGAPLGAVGATGRATGPHLHWSVSLNRAMVDPALFLPPAD

Samples

Sample ID Description Type Environment
1 2894023352 Diaphorobacter ruginosibacter DSM 27467 Isolate Nodule
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
5 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
6 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
9 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
10 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
11 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
12 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
13 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
14 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
15 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
16 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
17 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
18 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
19 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
20 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
21 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
22 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
23 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
24 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
27 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
28 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
29 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
30 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
31 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
32 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
33 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
34 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
35 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
36 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
37 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
38 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
39 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
40 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
41 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
42 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
43 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
44 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
45 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
47 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
48 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
50 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
51 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
52 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
53 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
54 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
55 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
56 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
57 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
58 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
59 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
60 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
61 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
62 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
63 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
64 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
65 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
66 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
67 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300027543 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes) (version 2) Metagenome Rhizosphere
96 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
97 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
98 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
102 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
103 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
104 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
105 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
106 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
107 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
108 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
109 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
110 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
111 3300042003 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821FE14Z081617_5551 Metagenome Rhizosphere
112 3300042115 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_080116_2642 Metagenome Rhizosphere
113 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
114 3300042437 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z081617_5554 Metagenome Rhizosphere
115 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
116 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
117 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
118 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
119 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
120 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
121 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
122 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
123 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
124 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
125 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
126 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
127 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
128 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
129 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
130 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
131 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
132 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
133 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
134 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
135 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
136 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
137 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
138 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
139 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
140 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
141 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
142 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
143 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
144 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
145 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
146 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
147 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
148 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
149 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
150 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
151 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
152 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
153 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
154 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
155 3300053739 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.59
Metatranscriptomes 0
Isolates 0.41

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 19.5
Nodule 0.41
Rhizoplane 1.24
Rhizosphere 64.32
Stem 0
Stem Tuber 0
Unclassified 14.52

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10064793 3300003316 Bacteria 3075
2 rootL2_10105318 3300003322 Bacteria 6623
3 Ga0055534_1007307 3300003784 Bacteria 2650
4 Ga0065165_1047756 3300005262 Bacteria 1234
5 Ga0065715_10175891 3300005293 Bacteria 1512
6 Ga0070670_100038284 3300005331 Bacteria 4124
7 Ga0070670_100072840 3300005331 Bacteria 2951
8 Ga0070677_10052309 3300005333 Bacteria 1657
9 Ga0068869_100029345 3300005334 Bacteria 3853
10 Ga0068869_100032494 3300005334 Bacteria 3678
11 Ga0068869_100241388 3300005334 Bacteria 1440
12 Ga0068868_100015977 3300005338 Bacteria 5567
13 Ga0068868_100268646 3300005338 Bacteria 1440
14 Ga0070668_100136139 3300005347 Unclassified 1976
15 Ga0070668_100302018 3300005347 Bacteria 1343
16 Ga0070669_100059064 3300005353 Bacteria 2816
17 Ga0070675_100052484 3300005354 Bacteria 3352
18 Ga0070671_100073261 3300005355 Bacteria 2861
19 Ga0070674_100211987 3300005356 Bacteria 1502
20 Ga0070673_100063590 3300005364 Unclassified 2937
21 Ga0070673_100112169 3300005364 Bacteria 2263
22 Ga0070673_100193187 3300005364 Bacteria 1749
23 Ga0070688_100179801 3300005365 Bacteria 1466
24 Ga0070667_100000872 3300005367 Bacteria 27983
25 Ga0070667_100346160 3300005367 Bacteria 1345
26 Ga0070667_100439087 3300005367 Bacteria 1192
27 Ga0070663_100044628 3300005455 Bacteria 3126
28 Ga0068867_100045326 3300005459 Bacteria 3224
29 Ga0068867_100079968 3300005459 Unclassified 2461
30 Ga0068867_100273416 3300005459 Bacteria 1382
31 Ga0070706_100002186 3300005467 Bacteria 19901
32 Ga0070698_100244175 3300005471 Bacteria 1729
33 Ga0068853_100197889 3300005539 Bacteria 1828
34 Ga0070672_100038505 3300005543 Bacteria 3654
35 Ga0070665_100032062 3300005548 Bacteria 5289
36 Ga0070665_100127614 3300005548 Bacteria 2546
37 Ga0068857_100004729 3300005577 Bacteria 11536
38 Ga0068857_100013220 3300005577 Bacteria 7193
39 Ga0068859_100009986 3300005617 Bacteria 9577
40 Ga0068859_100146659 3300005617 Bacteria 2435
41 Ga0068864_100005040 3300005618 Bacteria 10817
42 Ga0068864_100095168 3300005618 Bacteria 2634
43 Ga0068864_100472633 3300005618 Bacteria 1202
44 Ga0068861_100007940 3300005719 Bacteria 7303
45 Ga0068863_100051915 3300005841 Bacteria 3885
46 Ga0068863_100059103 3300005841 Bacteria 3627
47 Ga0068858_100018847 3300005842 Bacteria 6458
48 Ga0068860_100007050 3300005843 Bacteria 11250
49 Ga0068860_100134343 3300005843 Bacteria 2376
50 Ga0068862_100219226 3300005844 Bacteria 1722
51 Ga0068862_100394202 3300005844 Bacteria 1294
52 Ga0075368_10015429 3300006042 Bacteria 2834
53 Ga0075368_10022730 3300006042 Bacteria 2389
54 Ga0075363_100011095 3300006048 Bacteria 4304
55 Ga0075364_10045524 3300006051 Bacteria 2856
56 Ga0075362_10151788 3300006177 Bacteria 1112
57 Ga0075367_10003042 3300006178 Bacteria 7856
58 Ga0075367_10071056 3300006178 Bacteria 2093
59 Ga0075366_10000176 3300006195 Bacteria 27745
60 Ga0075366_10014807 3300006195 Bacteria 4461
61 Ga0075366_10015415 3300006195 Bacteria 4380
62 Ga0075366_10083094 3300006195 Bacteria 1914
63 Ga0075370_10008997 3300006353 Bacteria 5165
64 Ga0075370_10030266 3300006353 Bacteria 3020
65 Ga0075428_100013794 3300006844 Bacteria 9000
66 Ga0075428_100043539 3300006844 Bacteria 4935
67 Ga0075431_100102654 3300006847 Bacteria 2951
68 Ga0075429_100321430 3300006880 Bacteria 1354
69 Ga0097620_100009984 3300006931 Bacteria 9577
70 Ga0097620_100146663 3300006931 Bacteria 2435
71 Ga0111539_10009850 3300009094 Bacteria 12057
72 Ga0105245_10099928 3300009098 Bacteria 2683
73 Ga0105245_10202257 3300009098 Bacteria 1908
74 Ga0105247_10045773 3300009101 Bacteria 2685
75 Ga0114129_10049412 3300009147 Bacteria 5909
76 Ga0105242_10010013 3300009176 Bacteria 7259
77 Ga0105248_10019229 3300009177 Bacteria 7557
78 Ga0105249_10297528 3300009553 Bacteria 1617
79 Ga0105239_10095457 3300010375 Bacteria 3285
80 Ga0157374_10300112 3300013296 Bacteria 1589
81 Ga0157378_10111466 3300013297 Bacteria 2509
82 Ga0163162_10327632 3300013306 Bacteria 1664
83 Ga0157375_10058660 3300013308 Bacteria 3809
84 Ga0157375_10060955 3300013308 Bacteria 3744
85 Ga0157375_10067386 3300013308 Bacteria 3577
86 Ga0157375_10143709 3300013308 Bacteria 2515
87 Ga0157375_10640803 3300013308 Bacteria 1219
88 Ga0163163_10080059 3300014325 Bacteria 3266
89 Ga0163163_10580165 3300014325 Bacteria 1184
90 Ga0157380_10276555 3300014326 Bacteria 1534
91 Ga0157377_10146630 3300014745 Bacteria 1455
92 Ga0157379_10006260 3300014968 Bacteria 10248
93 Ga0163161_10089229 3300017792 Bacteria 2280
94 Ga0209673_1022251 3300025273 Bacteria 2192
95 Ga0209130_1006182 3300025284 Bacteria 3940
96 Ga0209675_1002727 3300025291 Bacteria 8844
97 Ga0209676_1010246 3300025292 Bacteria 3935
98 Ga0209025_1026606 3300025294 Bacteria 2896
99 Ga0209050_1034931 3300025298 Bacteria 1494
100 Ga0209257_1018120 3300025304 Bacteria 2730
101 Ga0207682_10043343 3300025893 Bacteria 1841
102 Ga0207645_10015772 3300025907 Bacteria 5010
103 Ga0207645_10023426 3300025907 Unclassified 4014
104 Ga0207645_10033526 3300025907 Bacteria 3300
105 Ga0207645_10089201 3300025907 Bacteria 1983
106 Ga0207684_10001654 3300025910 Bacteria 23687
107 Ga0207671_10037642 3300025914 Bacteria 3587
108 Ga0207646_10093086 3300025922 Bacteria 2698
109 Ga0207650_10011921 3300025925 Bacteria 5992
110 Ga0207650_10501893 3300025925 Bacteria 1014
111 Ga0207659_10017836 3300025926 Bacteria 4644
112 Ga0207687_10070816 3300025927 Bacteria 2490
113 Ga0207644_10135050 3300025931 Bacteria 1893
114 Ga0207706_10047601 3300025933 Bacteria 3793
115 Ga0207686_10024479 3300025934 Bacteria 3500
116 Ga0207691_10006908 3300025940 Bacteria 10947
117 Ga0207691_10084522 3300025940 Bacteria 2849
118 Ga0207711_10295268 3300025941 Bacteria 1494
119 Ga0207689_10039217 3300025942 Bacteria 3921
120 Ga0207689_10102496 3300025942 Bacteria 2351
121 Ga0207689_10127447 3300025942 Bacteria 2093
122 Ga0207651_10010267 3300025960 Bacteria 5181
123 Ga0207651_10066929 3300025960 Bacteria 2526
124 Ga0207658_10002493 3300025986 Bacteria 13419
125 Ga0207658_10270262 3300025986 Bacteria 1453
126 Ga0207677_10013550 3300026023 Bacteria 4730
127 Ga0207677_10164768 3300026023 Bacteria 1726
128 Ga0207677_10242510 3300026023 Bacteria 1459
129 Ga0207677_10432951 3300026023 Bacteria 1123
130 Ga0207703_10018541 3300026035 Bacteria 5433
131 Ga0207678_10049715 3300026067 Bacteria 3624
132 Ga0207678_10052635 3300026067 Bacteria 3511
133 Ga0207678_10077832 3300026067 Bacteria 2840
134 Ga0207641_10216550 3300026088 Bacteria 1774
135 Ga0207648_10003312 3300026089 Bacteria 16914
136 Ga0207648_10069214 3300026089 Bacteria 3075
137 Ga0207648_10204907 3300026089 Bacteria 1750
138 Ga0207676_10042423 3300026095 Bacteria 3499
139 Ga0207676_10166775 3300026095 Bacteria 1914
140 Ga0207676_10434801 3300026095 Bacteria 1234
141 Ga0207674_10005424 3300026116 Bacteria 15158
142 Ga0207674_10028375 3300026116 Bacteria 5908
143 Ga0207674_10086583 3300026116 Bacteria 3128
144 Ga0207675_100006975 3300026118 Bacteria 10685
145 Ga0207675_100122519 3300026118 Bacteria 2461
146 Ga0207683_10007176 3300026121 Bacteria 9551
147 Ga0207698_10020960 3300026142 Bacteria 4512
148 Ga0209999_1006972 3300027543 Bacteria 2033
149 Ga0209813_10002877 3300027866 Bacteria 3982
150 Ga0207428_10042147 3300027907 Bacteria 3692
151 Ga0268266_10008606 3300028379 Bacteria 9062
152 Ga0268265_10419386 3300028380 Bacteria 1242
153 Ga0268264_10023216 3300028381 Bacteria 5061
154 Ga0268264_10066690 3300028381 Bacteria 3036
155 Ga0307517_10001469 3300028786 Bacteria 39464
156 Ga0307517_10039962 3300028786 Bacteria 5130
157 Ga0307517_10184762 3300028786 Bacteria 1337
158 Ga0307515_10022377 3300028794 Bacteria 11141
159 Ga0307515_10202705 3300028794 Bacteria 1854
160 Ga0307512_10077495 3300030522 Bacteria 2415
161 Ga0307513_10021337 3300031456 Bacteria 7648
162 Ga0307513_10033378 3300031456 Bacteria 5786
163 Ga0307513_10363931 3300031456 Bacteria 1190
164 Ga0307509_10008057 3300031507 Bacteria 13530
165 Ga0307509_10015104 3300031507 Bacteria 9036
166 Ga0307509_10017777 3300031507 Bacteria 8171
167 Ga0307509_10283922 3300031507 Bacteria 1415
168 Ga0307508_10001483 3300031616 Bacteria 26326
169 Ga0307508_10045763 3300031616 Bacteria 3908
170 Ga0307508_10085616 3300031616 Bacteria 2735
171 Ga0307508_10128825 3300031616 Bacteria 2134
172 Ga0307514_10095919 3300031649 Bacteria 2144
173 Ga0307516_10000181 3300031730 Bacteria 81531
174 Ga0307516_10004925 3300031730 Bacteria 16239
175 Ga0307516_10178879 3300031730 Bacteria 1856
176 Ga0307516_10285780 3300031730 Bacteria 1330
177 Ga0307507_10031843 3300033179 Bacteria 5524
178 Ga0307510_10000311 3300033180 Bacteria 44908
179 Ga0307510_10132572 3300033180 Bacteria 2159
180 Ga0307510_10219174 3300033180 Bacteria 1416
181 Ga0439443_000768 3300042003 Bacteria 3163
182 Ga0450911_000642 3300042115 Bacteria 10478
183 Ga0439435_0002071 3300042436 Bacteria 3890
184 Ga0439444_0001198 3300042437 Bacteria 3279
185 Ga0439460_0005681 3300042461 Bacteria 3072
186 Ga0439460_0020140 3300042461 Unclassified 1812
187 Ga0495592_0000787 3300046454 Bacteria 21892
188 Ga0495630_0053624 3300046517 Bacteria 3020
189 Ga0495632_0005025 3300046519 Bacteria 8861
190 Ga0495632_0188305 3300046519 Bacteria 943
191 Ga0495666_0016982 3300046526 Bacteria 3623
192 Ga0495622_0113709 3300046557 Bacteria 1238
193 Ga0495668_0094779 3300046616 Bacteria 1634
194 Ga0495625_0011549 3300046660 Bacteria 7195
195 Ga0495658_0049573 3300046683 Bacteria 2372
196 Ga0495624_0122251 3300046690 Bacteria 1598
197 Ga0495649_0005469 3300046694 Bacteria 8069
198 Ga0495660_0021871 3300046810 Bacteria 3658
199 Ga0495687_000596 3300047443 Bacteria 42162
200 Ga0495687_052566 3300047443 Bacteria 1721
201 Ga0495626_0060310 3300048091 Bacteria 1729
202 Ga0495626_0079156 3300048091 Bacteria 1463
203 Ga0495626_0111078 3300048091 Bacteria 1187
204 Ga0496102_0065235 3300048905 Bacteria 3337
205 Ga0496106_0004261 3300048909 Bacteria 10649
206 Ga0496108_0535675 3300048911 Bacteria 1022
207 Ga0496122_0049030 3300048925 Bacteria 3240
208 Ga0496123_0082057 3300048926 Bacteria 1956
209 Ga0496123_0168064 3300048926 Bacteria 1160
210 Ga0496124_0077520 3300048927 Bacteria 2741
211 Ga0496125_0000621 3300048928 Bacteria 59634
212 Ga0496125_0008173 3300048928 Bacteria 11015
213 Ga0496126_0004505 3300048929 Bacteria 16596
214 nmdc:mga03683_221492_c1 3300050489 Bacteria 873
215 nmdc:mga03683_63745_c1 3300050489 Bacteria 1563
216 nmdc:mga00v17_47804_c1 3300050491 Bacteria 2592
217 nmdc:mga0yw44_94080_c1 3300050492 Bacteria 1899
218 nmdc:mga0k408_32451_c1 3300050493 Bacteria 2984
219 nmdc:mga0k408_564_c1 3300050493 Bacteria 20438
220 nmdc:mga0k408_72117_c1 3300050493 Bacteria 2016
221 nmdc:mga0k408_726_c1 3300050493 Bacteria 18066
222 nmdc:mga0k408_8724_c1 3300050493 Bacteria 5453
223 nmdc:mga0k408_9978_c1 3300050493 Bacteria 5126
224 nmdc:mga07m45_11680_c1 3300050496 Bacteria 4620
225 nmdc:mga07m45_121_c1 3300050496 Bacteria 31078
226 nmdc:mga07m45_62006_c1 3300050496 Bacteria 2119
227 nmdc:mga09592_27927_c1 3300050508 Bacteria 4685
228 nmdc:mga0qj67_128299_c1 3300050509 Bacteria 2053
229 nmdc:mga06r32_101208_c1 3300050510 Bacteria 2828
230 nmdc:mga0sz30_30361_c1 3300050516 Bacteria 2233
231 Ga0500578_0011083 3300053086 Bacteria 5826
232 Ga0500607_089087 3300053121 Bacteria 1557
233 Ga0500652_135942 3300053131 Bacteria 1024
234 Ga0500658_0008315 3300053134 Bacteria 3834
235 Ga0500559_0000954 3300053136 Bacteria 18188
236 Ga0500568_0034493 3300053139 Bacteria 2070
237 Ga0500619_018808 3300053154 Bacteria 1947
238 Ga0500622_0029318 3300053156 Bacteria 2894
239 Ga0500645_008501 3300053730 Bacteria 3502
240 Ga0500587_001730 3300053739 Bacteria 3099

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300027543 Ga0209999_1006972 Ga0209999_10069724 232
2 3300030522 Ga0307512_10077495 Ga0307512_100774953 245
3 3300046454 Ga0495592_0000787 Ga0495592_0000787_8157_8894 245
4 3300053154 Ga0500619_018808 Ga0500619_018808_753_1490 245
5 3300050489 nmdc:mga03683_221492_c1 nmdc:mga03683_221492_c1_106_861 251
6 3300005618 Ga0068864_100472633 Ga0068864_1004726332 253
7 3300005347 Ga0070668_100302018 Ga0070668_1003020181 254
8 3300005844 Ga0068862_100394202 Ga0068862_1003942022 254
9 3300026118 Ga0207675_100122519 Ga0207675_1001225192 254
10 3300025925 Ga0207650_10501893 Ga0207650_105018932 257
11 3300026088 Ga0207641_10216550 Ga0207641_102165502 257
12 3300026095 Ga0207676_10434801 Ga0207676_104348012 257
13 3300006844 Ga0075428_100043539 Ga0075428_1000435392 259
14 3300009147 Ga0114129_10049412 Ga0114129_100494126 259
15 3300042461 Ga0439460_0005681 Ga0439460_0005681_713_1498 259
16 3300050508 nmdc:mga09592_27927_c1 nmdc:mga09592_27927_c1_1413_2198 259
17 3300050509 nmdc:mga0qj67_128299_c1 nmdc:mga0qj67_128299_c1_876_1661 259
18 3300050510 nmdc:mga06r32_101208_c1 nmdc:mga06r32_101208_c1_1673_2458 259
19 3300026142 Ga0207698_10020960 Ga0207698_100209603 260
20 3300053086 Ga0500578_0011083 Ga0500578_0011083_3237_4034 260
21 3300053730 Ga0500645_008501 Ga0500645_008501_1062_1859 260
22 3300005367 Ga0070667_100439087 Ga0070667_1004390871 261
23 3300005356 Ga0070674_100211987 Ga0070674_1002119872 262
24 3300053131 Ga0500652_135942 Ga0500652_135942_200_1000 262
25 3300025986 Ga0207658_10270262 Ga0207658_102702622 263
26 3300048925 Ga0496122_0049030 Ga0496122_0049030_1921_2751 263
27 3300048926 Ga0496123_0082057 Ga0496123_0082057_859_1689 263
28 3300048928 Ga0496125_0000621 Ga0496125_0000621_23350_24180 263
29 3300048929 Ga0496126_0004505 Ga0496126_0004505_13303_14133 263
30 3300005459 Ga0068867_100045326 Ga0068867_1000453262 265
31 3300005843 Ga0068860_100134343 Ga0068860_1001343433 265
32 3300009553 Ga0105249_10297528 Ga0105249_102975282 265
33 3300013308 Ga0157375_10640803 Ga0157375_106408032 265
34 3300025940 Ga0207691_10084522 Ga0207691_100845224 265
35 3300025941 Ga0207711_10295268 Ga0207711_102952682 265
36 3300026067 Ga0207678_10049715 Ga0207678_100497154 265
37 3300026089 Ga0207648_10069214 Ga0207648_100692143 265
38 3300026121 Ga0207683_10007176 Ga0207683_100071767 265
39 3300028381 Ga0268264_10066690 Ga0268264_100666902 265
40 3300031730 Ga0307516_10285780 Ga0307516_102857802 265
41 3300046519 Ga0495632_0188305 Ga0495632_0188305_70_894 265
42 3300053136 Ga0500559_0000954 Ga0500559_0000954_11097_11921 265
43 3300053156 Ga0500622_0029318 Ga0500622_0029318_1186_2010 265
44 3300053739 Ga0500587_001730 Ga0500587_001730_750_1574 265
45 3300005331 Ga0070670_100072840 Ga0070670_1000728401 266
46 3300009176 Ga0105242_10010013 Ga0105242_100100133 266
47 3300025934 Ga0207686_10024479 Ga0207686_100244794 266
48 3300031616 Ga0307508_10085616 Ga0307508_100856163 266
49 3300033179 Ga0307507_10031843 Ga0307507_100318437 266
50 3300046526 Ga0495666_0016982 Ga0495666_0016982_1466_2317 266
51 3300046683 Ga0495658_0049573 Ga0495658_0049573_1155_2006 266
52 3300025907 Ga0207645_10023426 Ga0207645_100234264 268
53 3300026023 Ga0207677_10432951 Ga0207677_104329512 268
54 3300026067 Ga0207678_10077832 Ga0207678_100778322 268
55 3300042461 Ga0439460_0020140 Ga0439460_0020140_906_1739 268
56 3300006178 Ga0075367_10071056 Ga0075367_100710562 269
57 3300006195 Ga0075366_10015415 Ga0075366_100154154 269
58 3300006195 Ga0075366_10083094 Ga0075366_100830942 269
59 3300006844 Ga0075428_100013794 Ga0075428_1000137946 269
60 3300009094 Ga0111539_10009850 Ga0111539_100098507 269
61 3300014745 Ga0157377_10146630 Ga0157377_101466302 269
62 3300027907 Ga0207428_10042147 Ga0207428_100421474 269
63 3300050493 nmdc:mga0k408_72117_c1 nmdc:mga0k408_72117_c1_150_1022 269
64 3300005467 Ga0070706_100002186 Ga0070706_10000218618 270
65 3300025910 Ga0207684_10001654 Ga0207684_100016541 270
66 3300025922 Ga0207646_10093086 Ga0207646_100930862 270
67 3300048926 Ga0496123_0168064 Ga0496123_0168064_237_1109 270
68 3300003784 Ga0055534_1007307 Ga0055534_10073072 271
69 3300005262 Ga0065165_1047756 Ga0065165_10477562 271
70 3300005367 Ga0070667_100346160 Ga0070667_1003461602 271
71 3300025273 Ga0209673_1022251 Ga0209673_10222513 271
72 3300025284 Ga0209130_1006182 Ga0209130_10061822 271
73 3300025291 Ga0209675_1002727 Ga0209675_10027279 271
74 3300025292 Ga0209676_1010246 Ga0209676_10102462 271
75 3300025294 Ga0209025_1026606 Ga0209025_10266062 271
76 3300025298 Ga0209050_1034931 Ga0209050_10349312 271
77 3300031507 Ga0307509_10008057 Ga0307509_1000805712 271
78 3300031507 Ga0307509_10017777 Ga0307509_100177773 271
79 3300006042 Ga0075368_10015429 Ga0075368_100154292 272
80 3300006048 Ga0075363_100011095 Ga0075363_1000110952 272
81 3300006051 Ga0075364_10045524 Ga0075364_100455242 272
82 3300006178 Ga0075367_10003042 Ga0075367_100030429 272
83 3300006353 Ga0075370_10008997 Ga0075370_100089973 272
84 3300006847 Ga0075431_100102654 Ga0075431_1001026542 272
85 3300006880 Ga0075429_100321430 Ga0075429_1003214302 272
86 3300027866 Ga0209813_10002877 Ga0209813_100028773 272
87 3300042003 Ga0439443_000768 Ga0439443_000768_1201_2112 272
88 3300042436 Ga0439435_0002071 Ga0439435_0002071_1200_2111 272
89 3300042437 Ga0439444_0001198 Ga0439444_0001198_1477_2388 272
90 3300005333 Ga0070677_10052309 Ga0070677_100523091 273
91 3300005367 Ga0070667_100000872 Ga0070667_10000087217 273
92 3300013308 Ga0157375_10060955 Ga0157375_100609553 273
93 3300025986 Ga0207658_10002493 Ga0207658_100024932 273
94 3300031456 Ga0307513_10033378 Ga0307513_100333785 273
95 3300031507 Ga0307509_10283922 Ga0307509_102839221 273
96 3300033180 Ga0307510_10000311 Ga0307510_1000031133 273
97 3300048909 Ga0496106_0004261 Ga0496106_0004261_1793_2632 273
98 3300050491 nmdc:mga00v17_47804_c1 nmdc:mga00v17_47804_c1_233_1078 273
99 3300050492 nmdc:mga0yw44_94080_c1 nmdc:mga0yw44_94080_c1_568_1413 273
100 3300050493 nmdc:mga0k408_564_c1 nmdc:mga0k408_564_c1_12616_13461 273
101 3300050496 nmdc:mga07m45_62006_c1 nmdc:mga07m45_62006_c1_494_1339 273
102 3300050516 nmdc:mga0sz30_30361_c1 nmdc:mga0sz30_30361_c1_899_1744 273
103 3300053121 Ga0500607_089087 Ga0500607_089087_148_987 273
104 3300005471 Ga0070698_100244175 Ga0070698_1002441751 274
105 3300006353 Ga0075370_10030266 Ga0075370_100302662 274
106 3300042115 Ga0450911_000642 Ga0450911_000642_4062_4925 275
107 3300048927 Ga0496124_0077520 Ga0496124_0077520_918_1781 275
108 3300048928 Ga0496125_0008173 Ga0496125_0008173_7593_8456 275
109 3300014325 Ga0163163_10580165 Ga0163163_105801652 276
110 3300031649 Ga0307514_10095919 Ga0307514_100959192 276
111 3300046517 Ga0495630_0053624 Ga0495630_0053624_396_1232 276
112 3300046557 Ga0495622_0113709 Ga0495622_0113709_300_1136 276
113 3300046690 Ga0495624_0122251 Ga0495624_0122251_198_1034 276
114 3300005293 Ga0065715_10175891 Ga0065715_101758912 277
115 3300005331 Ga0070670_100038284 Ga0070670_1000382847 277
116 3300005334 Ga0068869_100032494 Ga0068869_1000324944 277
117 3300005338 Ga0068868_100268646 Ga0068868_1002686462 277
118 3300005353 Ga0070669_100059064 Ga0070669_1000590642 277
119 3300005364 Ga0070673_100112169 Ga0070673_1001121692 277
120 3300005365 Ga0070688_100179801 Ga0070688_1001798012 277
121 3300005459 Ga0068867_100079968 Ga0068867_1000799682 277
122 3300005577 Ga0068857_100004729 Ga0068857_10000472910 277
123 3300005617 Ga0068859_100009986 Ga0068859_10000998610 277
124 3300005618 Ga0068864_100005040 Ga0068864_1000050405 277
125 3300005719 Ga0068861_100007940 Ga0068861_1000079408 277
126 3300005841 Ga0068863_100059103 Ga0068863_1000591032 277
127 3300005842 Ga0068858_100018847 Ga0068858_1000188475 277
128 3300005843 Ga0068860_100007050 Ga0068860_1000070509 277
129 3300006931 Ga0097620_100009984 Ga0097620_1000099842 277
130 3300017792 Ga0163161_10089229 Ga0163161_100892292 277
131 3300025907 Ga0207645_10033526 Ga0207645_100335262 277
132 3300025925 Ga0207650_10011921 Ga0207650_100119215 277
133 3300025927 Ga0207687_10070816 Ga0207687_100708162 277
134 3300025942 Ga0207689_10039217 Ga0207689_100392174 277
135 3300026035 Ga0207703_10018541 Ga0207703_100185412 277
136 3300026089 Ga0207648_10204907 Ga0207648_102049072 277
137 3300026095 Ga0207676_10042423 Ga0207676_100424232 277
138 3300026116 Ga0207674_10005424 Ga0207674_100054244 277
139 3300026118 Ga0207675_100006975 Ga0207675_10000697513 277
140 3300028381 Ga0268264_10023216 Ga0268264_100232163 277
141 3300028786 Ga0307517_10001469 Ga0307517_1000146922 277
142 3300028786 Ga0307517_10184762 Ga0307517_101847622 277
143 3300028794 Ga0307515_10022377 Ga0307515_100223777 277
144 3300031456 Ga0307513_10021337 Ga0307513_100213378 277
145 3300031507 Ga0307509_10015104 Ga0307509_100151042 277
146 3300031616 Ga0307508_10001483 Ga0307508_100014832 277
147 3300031730 Ga0307516_10178879 Ga0307516_101788791 277
148 3300005548 Ga0070665_100032062 Ga0070665_1000320623 278
149 3300006195 Ga0075366_10000176 Ga0075366_100001766 278
150 3300013297 Ga0157378_10111466 Ga0157378_101114662 278
151 3300025304 Ga0209257_1018120 Ga0209257_10181203 278
152 3300028379 Ga0268266_10008606 Ga0268266_100086067 278
153 3300028794 Ga0307515_10202705 Ga0307515_102027052 278
154 3300031456 Ga0307513_10363931 Ga0307513_103639312 278
155 3300047443 Ga0495687_000596 Ga0495687_000596_19491_20339 278
156 3300048091 Ga0495626_0060310 Ga0495626_0060310_35_883 278
157 3300050493 nmdc:mga0k408_8724_c1 nmdc:mga0k408_8724_c1_4555_5403 278
158 3300050496 nmdc:mga07m45_121_c1 nmdc:mga07m45_121_c1_3053_3901 278
159 3300025933 Ga0207706_10047601 Ga0207706_100476012 279
160 3300031616 Ga0307508_10045763 Ga0307508_100457633 279
161 3300033180 Ga0307510_10132572 Ga0307510_101325722 279
162 3300048091 Ga0495626_0079156 Ga0495626_0079156_28_879 279
163 iso_pu_bacteria 2894023352 2894024891 279
164 3300005334 Ga0068869_100029345 Ga0068869_1000293452 280
165 3300005338 Ga0068868_100015977 Ga0068868_1000159775 280
166 3300005364 Ga0070673_100193187 Ga0070673_1001931872 280
167 3300005543 Ga0070672_100038505 Ga0070672_1000385054 280
168 3300005577 Ga0068857_100013220 Ga0068857_1000132202 280
169 3300006177 Ga0075362_10151788 Ga0075362_101517882 280
170 3300010375 Ga0105239_10095457 Ga0105239_100954574 280
171 3300013308 Ga0157375_10058660 Ga0157375_100586602 280
172 3300025893 Ga0207682_10043343 Ga0207682_100433431 280
173 3300025907 Ga0207645_10015772 Ga0207645_100157725 280
174 3300025931 Ga0207644_10135050 Ga0207644_101350502 280
175 3300025940 Ga0207691_10006908 Ga0207691_100069085 280
176 3300025942 Ga0207689_10127447 Ga0207689_101274472 280
177 3300025960 Ga0207651_10066929 Ga0207651_100669292 280
178 3300026023 Ga0207677_10013550 Ga0207677_100135502 280
179 3300026089 Ga0207648_10003312 Ga0207648_100033128 280
180 3300026116 Ga0207674_10028375 Ga0207674_100283752 280
181 3300005334 Ga0068869_100241388 Ga0068869_1002413881 281
182 3300005354 Ga0070675_100052484 Ga0070675_1000524844 281
183 3300005364 Ga0070673_100063590 Ga0070673_1000635904 281
184 3300005455 Ga0070663_100044628 Ga0070663_1000446283 281
185 3300005459 Ga0068867_100273416 Ga0068867_1002734162 281
186 3300005539 Ga0068853_100197889 Ga0068853_1001978892 281
187 3300005548 Ga0070665_100127614 Ga0070665_1001276142 281
188 3300005844 Ga0068862_100219226 Ga0068862_1002192262 281
189 3300006042 Ga0075368_10022730 Ga0075368_100227301 281
190 3300006195 Ga0075366_10014807 Ga0075366_100148071 281
191 3300014326 Ga0157380_10276555 Ga0157380_102765552 281
192 3300025907 Ga0207645_10089201 Ga0207645_100892012 281
193 3300025914 Ga0207671_10037642 Ga0207671_100376422 281
194 3300025926 Ga0207659_10017836 Ga0207659_100178362 281
195 3300025942 Ga0207689_10102496 Ga0207689_101024962 281
196 3300025960 Ga0207651_10010267 Ga0207651_100102673 281
197 3300026067 Ga0207678_10052635 Ga0207678_100526355 281
198 3300026116 Ga0207674_10086583 Ga0207674_100865833 281
199 3300031616 Ga0307508_10128825 Ga0307508_101288252 281
200 3300046519 Ga0495632_0005025 Ga0495632_0005025_2720_3577 281
201 3300046616 Ga0495668_0094779 Ga0495668_0094779_619_1476 281
202 3300046660 Ga0495625_0011549 Ga0495625_0011549_4854_5711 281
203 3300046694 Ga0495649_0005469 Ga0495649_0005469_1101_1958 281
204 3300046810 Ga0495660_0021871 Ga0495660_0021871_1750_2607 281
205 3300047443 Ga0495687_052566 Ga0495687_052566_260_1117 281
206 3300048091 Ga0495626_0111078 Ga0495626_0111078_309_1166 281
207 3300050489 nmdc:mga03683_63745_c1 nmdc:mga03683_63745_c1_339_1196 281
208 3300050493 nmdc:mga0k408_726_c1 nmdc:mga0k408_726_c1_14109_14966 281
209 3300050493 nmdc:mga0k408_9978_c1 nmdc:mga0k408_9978_c1_2276_3130 281
210 3300050496 nmdc:mga07m45_11680_c1 nmdc:mga07m45_11680_c1_2599_3456 281
211 3300053134 Ga0500658_0008315 Ga0500658_0008315_288_1145 281
212 3300053139 Ga0500568_0034493 Ga0500568_0034493_16_873 281
213 3300005347 Ga0070668_100136139 Ga0070668_1001361392 282
214 3300009098 Ga0105245_10099928 Ga0105245_100999282 282
215 3300009101 Ga0105247_10045773 Ga0105247_100457732 282
216 3300009177 Ga0105248_10019229 Ga0105248_100192295 282
217 3300013306 Ga0163162_10327632 Ga0163162_103276322 282
218 3300013308 Ga0157375_10067386 Ga0157375_100673862 282
219 3300014325 Ga0163163_10080059 Ga0163163_100800593 282
220 3300014968 Ga0157379_10006260 Ga0157379_100062606 282
221 3300026023 Ga0207677_10242510 Ga0207677_102425102 282
222 3300028380 Ga0268265_10419386 Ga0268265_104193861 282
223 3300031730 Ga0307516_10004925 Ga0307516_1000492511 282
224 3300048905 Ga0496102_0065235 Ga0496102_0065235_2223_3167 282
225 3300048911 Ga0496108_0535675 Ga0496108_0535675_40_984 282
226 3300005355 Ga0070671_100073261 Ga0070671_1000732613 283
227 3300005618 Ga0068864_100095168 Ga0068864_1000951682 283
228 3300005841 Ga0068863_100051915 Ga0068863_1000519154 283
229 3300009098 Ga0105245_10202257 Ga0105245_102022572 283
230 3300013296 Ga0157374_10300112 Ga0157374_103001122 283
231 3300013308 Ga0157375_10143709 Ga0157375_101437092 283
232 3300026095 Ga0207676_10166775 Ga0207676_101667752 283
233 3300033180 Ga0307510_10219174 Ga0307510_102191742 283
234 3300050493 nmdc:mga0k408_32451_c1 nmdc:mga0k408_32451_c1_1053_1937 283
235 3300005617 Ga0068859_100146659 Ga0068859_1001466592 286
236 3300006931 Ga0097620_100146663 Ga0097620_1001466632 286
237 3300026023 Ga0207677_10164768 Ga0207677_101647682 289
238 3300028786 Ga0307517_10039962 Ga0307517_100399623 300
239 3300031730 Ga0307516_10000181 Ga0307516_1000018160 300
240 3300003316 rootH1_10064793 rootH1_100647932 301
241 3300003322 rootL2_10105318 rootL2_101053186 301

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01551

Peptidase_M23

Peptidase family M23

202

297

0.97

PF18421

Peptidase_M23_N

Peptidase family M23 N-terminal domain

57

129

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
2hsi-assembly2.cif.gz_B crystal structure of putative peptidase m23 from pseudomonas aeruginosa, new york structural genomics consortium 0.948 46 290
2hsi-assembly1.cif.gz_A crystal structure of putative peptidase m23 from pseudomonas aeruginosa, new york structural genomics consortium 0.9317 47 290
5j1l-assembly1.cif.gz_A crystal structure of csd1-csd2 dimer i 0.9243 190 289
4bh5-assembly4.cif.gz_D lytm domain of envc, an activator of cell wall amidases in escherichia coli 0.9111 165 290
2hsi-assembly2.cif.gz_B crystal structure of putative peptidase m23 from pseudomonas aeruginosa, new york structural genomics consortium 0.9038 46 290
ID Description Score Start End Superfamily
2hsiA02 Mainly Beta;Distorted Sandwich;Glucose Permease (Domain IIA);Glucose Permease (Domain IIA) 0.9414 140 290 2.70.70.10
af_Q2FW53_122_280_2.70.70.10 Mainly Beta;Distorted Sandwich;Glucose Permease (Domain IIA);Glucose Permease (Domain IIA) 0.9199 202 277 2.70.70.10
4bh5D00 Mainly Beta;Distorted Sandwich;Glucose Permease (Domain IIA);Glucose Permease (Domain IIA) 0.9111 165 290 2.70.70.10
2hsiA02 Mainly Beta;Distorted Sandwich;Glucose Permease (Domain IIA);Glucose Permease (Domain IIA) 0.8975 140 290 2.70.70.10
2hsiB01 Mainly Beta;Sandwich;Immunoglobulin-like;Peptidoglycan hydrolase domains 0.8921 46 120 2.60.40.1590
ID Description Score Start End GO Terms
AF-A0A7C3QZH3-F1-model_v4 M23 family metallopeptidase 0.9633 193 287 GO:0004222
AF-A0A538HIL5-F1-model_v4 M23 family metallopeptidase 0.9602 195 290 GO:0004222
AF-A0A800LSA0-F1-model_v4 M23 family metallopeptidase 0.9577 193 286 GO:0004222
AF-A0A060C518-F1-model_v4 Peptidase_M23 0.9558 197 275 GO:0004222
AF-X1LTD7-F1-model_v4 Peptidase M23 domain-containing protein 0.9513 191 293 GO:0004222

Feature Viewer

pLDDT pTM Quality
86.07 0.81 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map