F353758

General Info

Members Datasets Scaffolds Average Seq Length
241 144 482 220

Family's Representative Sequence

Representative Sequence 3300009551|Ga0105238_10071457|Ga0105238_100714575
Length 236
Sequence LNRTGPDVKIALPVVVCLLAGLGAVWAAPPLPADPRAAKVVQDYLRASQAEESRDRDERVAARLDALQSGSTVLANPQGDITIVEFSDYTCPYCKAAEPRLMRLVDGDKRVRLVMREFPILTRQSLVASRMALAAVKQGKYRVFHLAMMRREGLWGEAEVMETAKAVGVDVPRARKDMFAPDVTDEIIANFNLARGIRVFQTPAYIVGGHLVTGDSADINFAREVARAKGLSQRRP

Samples

Sample ID Description Type Environment
1 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
2 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
3 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
11 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
12 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
13 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
16 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
17 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
18 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
19 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
20 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
21 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
22 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
23 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
24 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
25 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
26 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
27 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
28 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
29 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
30 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
31 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
32 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
33 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
34 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
35 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
36 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
37 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
39 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
40 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
41 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
42 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
43 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
44 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
45 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
46 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
47 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
48 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
49 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
50 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
51 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
52 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
53 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
54 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
55 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
56 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
57 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
58 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
59 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
60 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
95 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
96 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
97 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
98 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
99 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
100 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
101 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
102 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
103 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
104 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
105 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
106 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
107 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
108 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
109 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
110 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
111 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
112 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
113 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
114 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
115 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
116 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
117 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
118 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
119 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
120 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
121 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
122 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
123 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
124 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
128 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
129 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
133 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
134 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
135 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
137 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
138 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
139 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
140 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
141 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
142 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
143 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
144 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.81
Nodule 0
Rhizoplane 0
Rhizosphere 92.53
Stem 0
Stem Tuber 0
Unclassified 21.99

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105238_10071457 3300009551 Bacteria 3468
2 JGI25165J46597_1000047 3300003214 Bacteria 254601
3 JGI25153J46596_10000409 3300003215 Bacteria 28508
4 rootH1_10028047 3300003323 Bacteria 1841
5 rootH1_10100666 3300003323 Bacteria 1153
6 Ga0070658_10012858 3300005327 Bacteria 6718
7 Ga0070683_100381076 3300005329 Bacteria 1344
8 Ga0070670_100209913 3300005331 Bacteria 1693
9 Ga0068869_100014274 3300005334 Bacteria 5303
10 Ga0070680_100017822 3300005336 Bacteria 5603
11 Ga0068868_100173142 3300005338 Bacteria 1788
12 Ga0070660_100010039 3300005339 Bacteria 6678
13 Ga0070660_100292649 3300005339 Bacteria 1334
14 Ga0070689_100430174 3300005340 Bacteria 1120
15 Ga0070661_100075488 3300005344 Unclassified 2484
16 Ga0070661_100243031 3300005344 Bacteria 1387
17 Ga0070675_100255802 3300005354 Bacteria 1534
18 Ga0070675_100778803 3300005354 Unclassified 874
19 Ga0070667_100059952 3300005367 Bacteria 3220
20 Ga0070667_100393815 3300005367 Unclassified 1260
21 Ga0070713_100129868 3300005436 Bacteria 2221
22 Ga0070711_100063378 3300005439 Bacteria 2580
23 Ga0070694_100207984 3300005444 Bacteria 1462
24 Ga0070678_100009884 3300005456 Bacteria 5799
25 Ga0070679_100004210 3300005530 Bacteria 13275
26 Ga0070684_100259386 3300005535 Unclassified 1590
27 Ga0070684_100432942 3300005535 Unclassified 1215
28 Ga0068853_100150308 3300005539 Bacteria 2096
29 Ga0068853_100287548 3300005539 Bacteria 1517
30 Ga0070665_100000639 3300005548 Bacteria 47531
31 Ga0070665_100027788 3300005548 Bacteria 5696
32 Ga0070665_100061828 3300005548 Bacteria 3754
33 Ga0070665_100251176 3300005548 Bacteria 1769
34 Ga0070665_100332633 3300005548 Bacteria 1524
35 Ga0070665_100530942 3300005548 Bacteria 1188
36 Ga0068855_100135075 3300005563 Bacteria 2814
37 Ga0068855_100208903 3300005563 Unclassified 2195
38 Ga0068855_100372444 3300005563 Bacteria 1569
39 Ga0068857_100508863 3300005577 Bacteria 1131
40 Ga0068856_100515170 3300005614 Archaea 1217
41 Ga0068864_100196336 3300005618 Bacteria 1852
42 Ga0068864_100263892 3300005618 Unclassified 1603
43 Ga0068866_10205308 3300005718 Unclassified 1180
44 Ga0068861_100279111 3300005719 Bacteria 1438
45 Ga0068870_10097589 3300005840 Bacteria 1654
46 Ga0068870_10099833 3300005840 Bacteria 1638
47 Ga0068863_100038862 3300005841 Bacteria 4527
48 Ga0068858_100240025 3300005842 Bacteria 1719
49 Ga0097621_100000986 3300006237 Bacteria 19981
50 Ga0097621_100184303 3300006237 Unclassified 1805
51 Ga0097621_100216951 3300006237 Bacteria 1666
52 Ga0097621_100993777 3300006237 Unclassified 785
53 Ga0068871_100013505 3300006358 Bacteria 6062
54 Ga0068871_100106238 3300006358 Unclassified 2356
55 Ga0068871_100118175 3300006358 Bacteria 2237
56 Ga0068865_100117083 3300006881 Bacteria 1975
57 Ga0068865_100139719 3300006881 Bacteria 1825
58 Ga0068865_100512814 3300006881 Bacteria 1001
59 Ga0105240_10021886 3300009093 Bacteria 8494
60 Ga0105240_10058607 3300009093 Bacteria 4807
61 Ga0105240_10094741 3300009093 Bacteria 3641
62 Ga0105240_10114362 3300009093 Bacteria 3260
63 Ga0105240_10560770 3300009093 Bacteria 1262
64 Ga0111539_10292924 3300009094 Unclassified 1894
65 Ga0105245_10012533 3300009098 Bacteria 7377
66 Ga0105245_10012928 3300009098 Bacteria 7276
67 Ga0105247_10333584 3300009101 Bacteria 1062
68 Ga0105243_10113255 3300009148 Bacteria 2274
69 Ga0105241_10021254 3300009174 Bacteria 4796
70 Ga0105241_10100790 3300009174 Unclassified 2295
71 Ga0105241_10357372 3300009174 Bacteria 1270
72 Ga0105242_10295339 3300009176 Bacteria 1477
73 Ga0105248_10230724 3300009177 Bacteria 2084
74 Ga0105237_10124036 3300009545 Bacteria 2578
75 Ga0105237_10483291 3300009545 Unclassified 1245
76 Ga0105237_10490304 3300009545 Bacteria 1235
77 Ga0105238_10079306 3300009551 Bacteria 3273
78 Ga0105238_10098987 3300009551 Bacteria 2899
79 Ga0105238_10396276 3300009551 Bacteria 1373
80 Ga0105238_10422790 3300009551 Bacteria 1327
81 Ga0105249_10487270 3300009553 Bacteria 1276
82 Ga0105239_10310322 3300010375 Unclassified 1778
83 Ga0105246_10020128 3300011119 Unclassified 4277
84 Ga0105246_10304015 3300011119 Bacteria 1289
85 Ga0157370_10067735 3300013104 Bacteria 3374
86 Ga0157370_10380094 3300013104 Unclassified 1301
87 Ga0157369_10433940 3300013105 Unclassified 1361
88 Ga0157374_10312547 3300013296 Unclassified 1556
89 Ga0157374_10352022 3300013296 Bacteria 1463
90 Ga0157378_10040005 3300013297 Bacteria 4158
91 Ga0157378_10088027 3300013297 Bacteria 2818
92 Ga0157378_10424502 3300013297 Bacteria 1315
93 Ga0163162_10241462 3300013306 Bacteria 1937
94 Ga0163162_10450837 3300013306 Unclassified 1418
95 Ga0157372_10014988 3300013307 Bacteria 8296
96 Ga0163163_10000002 3300014325 Bacteria 609846
97 Ga0157380_10166087 3300014326 Bacteria 1923
98 Ga0157380_10176206 3300014326 Bacteria 1874
99 Ga0157379_10000852 3300014968 Bacteria 24711
100 Ga0157379_10154223 3300014968 Bacteria 2072
101 Ga0157379_10333772 3300014968 Bacteria 1386
102 Ga0157379_10496799 3300014968 Unclassified 1130
103 Ga0157376_10215590 3300014969 Bacteria 1775
104 Ga0157376_10222934 3300014969 Bacteria 1747
105 Ga0157376_10701756 3300014969 Bacteria 1017
106 Ga0209233_1000045 3300025261 Bacteria 473379
107 Ga0209233_1001578 3300025261 Bacteria 8920
108 Ga0209233_1047434 3300025261 Bacteria 892
109 Ga0209758_1000008 3300025297 Bacteria 1215263
110 Ga0207680_10040878 3300025903 Bacteria 2702
111 Ga0207680_10042403 3300025903 Bacteria 2662
112 Ga0207680_10064136 3300025903 Bacteria 2251
113 Ga0207645_10291164 3300025907 Bacteria 1086
114 Ga0207643_10178738 3300025908 Bacteria 1283
115 Ga0207705_10001563 3300025909 Bacteria 18185
116 Ga0207654_10165828 3300025911 Bacteria 1430
117 Ga0207695_10079346 3300025913 Bacteria 3327
118 Ga0207695_10109234 3300025913 Unclassified 2748
119 Ga0207695_10145968 3300025913 Unclassified 2310
120 Ga0207695_10204723 3300025913 Bacteria 1886
121 Ga0207695_10250849 3300025913 Bacteria 1669
122 Ga0207695_10378643 3300025913 Unclassified 1301
123 Ga0207695_10410094 3300025913 Bacteria 1239
124 Ga0207671_10077087 3300025914 Bacteria 2495
125 Ga0207671_10104446 3300025914 Bacteria 2149
126 Ga0207671_10310136 3300025914 Unclassified 1247
127 Ga0207671_10483516 3300025914 Bacteria 987
128 Ga0207660_10129420 3300025917 Unclassified 1920
129 Ga0207657_10019080 3300025919 Bacteria 6524
130 Ga0207657_10101434 3300025919 Bacteria 2388
131 Ga0207649_10733832 3300025920 Bacteria 768
132 Ga0207652_10220236 3300025921 Unclassified 1710
133 Ga0207694_10245476 3300025924 Bacteria 1464
134 Ga0207694_10262045 3300025924 Unclassified 1416
135 Ga0207694_10314008 3300025924 Bacteria 1292
136 Ga0207659_10206682 3300025926 Bacteria 1571
137 Ga0207687_10006766 3300025927 Bacteria 7552
138 Ga0207686_10196759 3300025934 Bacteria 1441
139 Ga0207709_10064608 3300025935 Unclassified 2299
140 Ga0207704_10104413 3300025938 Bacteria 1898
141 Ga0207704_10122343 3300025938 Bacteria 1784
142 Ga0207704_10131383 3300025938 Bacteria 1735
143 Ga0207711_10140655 3300025941 Bacteria 2171
144 Ga0207689_10050551 3300025942 Unclassified 3427
145 Ga0207679_10924897 3300025945 Unclassified 798
146 Ga0207667_10030381 3300025949 Bacteria 5846
147 Ga0207667_10348397 3300025949 Bacteria 1511
148 Ga0207667_10465730 3300025949 Bacteria 1283
149 Ga0207667_10544612 3300025949 Unclassified 1174
150 Ga0207640_10623074 3300025981 Unclassified 916
151 Ga0207658_10381123 3300025986 Unclassified 1235
152 Ga0207677_10097829 3300026023 Unclassified 2151
153 Ga0207703_10251770 3300026035 Bacteria 1592
154 Ga0207703_10664642 3300026035 Unclassified 989
155 Ga0207639_10155393 3300026041 Bacteria 1921
156 Ga0207702_10446732 3300026078 Archaea 1254
157 Ga0207648_10016157 3300026089 Bacteria 6832
158 Ga0207676_10272689 3300026095 Bacteria 1533
159 Ga0207674_10113047 3300026116 Unclassified 2688
160 Ga0207674_10414611 3300026116 Bacteria 1301
161 Ga0207675_100247821 3300026118 Bacteria 1723
162 Ga0207683_10063703 3300026121 Bacteria 3248
163 Ga0207683_10154401 3300026121 Bacteria 2073
164 Ga0268266_10000381 3300028379 Bacteria 67749
165 Ga0268266_10010455 3300028379 Bacteria 8110
166 Ga0268266_10021060 3300028379 Bacteria 5556
167 Ga0268266_10048664 3300028379 Bacteria 3634
168 Ga0268266_10103383 3300028379 Bacteria 2514
169 Ga0268266_10128362 3300028379 Bacteria 2265
170 Ga0268266_10148165 3300028379 Unclassified 2112
171 Ga0268266_10409376 3300028379 Bacteria 1284
172 Ga0268265_10759155 3300028380 Bacteria 942
173 Ga0265318_10000581 3300028577 Bacteria 25684
174 Ga0265338_10175004 3300028800 Bacteria 1641
175 Ga0265332_10169570 3300031238 Bacteria 911
176 Ga0265320_10217037 3300031240 Bacteria 852
177 Ga0265325_10015449 3300031241 Bacteria 4292
178 Ga0265325_10155806 3300031241 Bacteria 1078
179 Ga0265340_10159765 3300031247 Bacteria 1024
180 Ga0265331_10028118 3300031250 Bacteria 2813
181 Ga0265316_10092327 3300031344 Bacteria 2308
182 Ga0265313_10001846 3300031595 Bacteria 19319
183 Ga0265313_10002833 3300031595 Bacteria 14580
184 Ga0265314_10048917 3300031711 Bacteria 2963
185 Ga0265314_10110174 3300031711 Bacteria 1751
186 Ga0265314_10332261 3300031711 Unclassified 842
187 Ga0265342_10031944 3300031712 Bacteria 3250
188 Ga0307516_10160141 3300031730 Bacteria 2002
189 Ga0307510_10417452 3300033180 Bacteria 784
190 Ga0373937_0088379 3300036401 Unclassified 2869
191 Ga0395900_0043928 3300037418 Bacteria 4606
192 Ga0439460_0048787 3300042461 Bacteria 1264
193 Ga0495592_0268891 3300046454 Unclassified 1119
194 Ga0495580_0389943 3300046472 Bacteria 940
195 Ga0495664_0107009 3300046477 Unclassified 1687
196 Ga0495630_0161728 3300046517 Unclassified 1705
197 Ga0495665_0172641 3300046531 Bacteria 1125
198 Ga0495640_0253834 3300046533 Unclassified 1100
199 Ga0495621_0115042 3300046539 Unclassified 1035
200 Ga0495622_0036678 3300046557 Unclassified 2285
201 Ga0495634_0059840 3300046642 Unclassified 2536
202 Ga0495625_0222549 3300046660 Bacteria 1236
203 Ga0495674_0196490 3300047319 Unclassified 1675
204 Ga0495672_0035290 3300047320 Bacteria 3081
205 Ga0501032_0082294 3300049569 Bacteria 2142
206 Ga0501033_0008866 3300049570 Bacteria 7770
207 Ga0501033_0047244 3300049570 Bacteria 3200
208 Ga0501033_0058561 3300049570 Bacteria 2845
209 Ga0501033_0086682 3300049570 Bacteria 2292
210 Ga0501034_0419051 3300049571 Unclassified 1260
211 Ga0501036_0140609 3300049572 Unclassified 2037
212 Ga0501037_0087833 3300049573 Bacteria 2250
213 Ga0501038_0535514 3300049574 Bacteria 892
214 Ga0501039_0214616 3300049575 Unclassified 1513
215 Ga0501043_0024418 3300049579 Bacteria 4744
216 Ga0501046_0003957 3300049580 Bacteria 13532
217 Ga0501047_0008827 3300049581 Bacteria 9511
218 Ga0501047_0231428 3300049581 Bacteria 1701
219 Ga0501073_0014236 3300049589 Bacteria 5776
220 Ga0501073_0029640 3300049589 Unclassified 3910
221 Ga0501073_0103898 3300049589 Bacteria 1972
222 Ga0501080_0014544 3300049742 Bacteria 7249
223 Ga0501083_0115981 3300049744 Bacteria 1758
224 Ga0501035_0033185 3300049822 Bacteria 4695
225 Ga0501035_0036679 3300049822 Bacteria 4442
226 Ga0501035_0080671 3300049822 Bacteria 2872
227 Ga0501035_0165370 3300049822 Unclassified 1913
228 Ga0501044_0005030 3300049823 Bacteria 14759
229 Ga0501044_0087716 3300049823 Bacteria 3142
230 Ga0501044_0112284 3300049823 Bacteria 2732
231 Ga0501044_0364967 3300049823 Bacteria 1362
232 Ga0501044_0408589 3300049823 Bacteria 1269
233 Ga0500643_000023 3300053087 Bacteria 273090
234 Ga0500641_0028649 3300053096 Bacteria 2177
235 Ga0500595_000623 3300053119 Bacteria 21193
236 Ga0500595_030332 3300053119 Bacteria 1823
237 Ga0500642_0236691 3300053130 Bacteria 842
238 Ga0500559_0036853 3300053136 Bacteria 2118
239 Ga0500568_0032459 3300053139 Bacteria 2147
240 Ga0500573_0000002 3300053140 Bacteria 407088
241 Ga0501082_0154280 3300060353 Bacteria 1995
242 Ga0105238_10071457
243 JGI25165J46597_1000047
244 JGI25153J46596_10000409
245 rootH1_10028047
246 rootH1_10100666
247 Ga0070658_10012858
248 Ga0070683_100381076
249 Ga0070670_100209913
250 Ga0068869_100014274
251 Ga0070680_100017822
252 Ga0068868_100173142
253 Ga0070660_100010039
254 Ga0070660_100292649
255 Ga0070689_100430174
256 Ga0070661_100075488
257 Ga0070661_100243031
258 Ga0070675_100255802
259 Ga0070675_100778803
260 Ga0070667_100059952
261 Ga0070667_100393815
262 Ga0070713_100129868
263 Ga0070711_100063378
264 Ga0070694_100207984
265 Ga0070678_100009884
266 Ga0070679_100004210
267 Ga0070684_100259386
268 Ga0070684_100432942
269 Ga0068853_100150308
270 Ga0068853_100287548
271 Ga0070665_100000639
272 Ga0070665_100027788
273 Ga0070665_100061828
274 Ga0070665_100251176
275 Ga0070665_100332633
276 Ga0070665_100530942
277 Ga0068855_100135075
278 Ga0068855_100208903
279 Ga0068855_100372444
280 Ga0068857_100508863
281 Ga0068856_100515170
282 Ga0068864_100196336
283 Ga0068864_100263892
284 Ga0068866_10205308
285 Ga0068861_100279111
286 Ga0068870_10097589
287 Ga0068870_10099833
288 Ga0068863_100038862
289 Ga0068858_100240025
290 Ga0097621_100000986
291 Ga0097621_100184303
292 Ga0097621_100216951
293 Ga0097621_100993777
294 Ga0068871_100013505
295 Ga0068871_100106238
296 Ga0068871_100118175
297 Ga0068865_100117083
298 Ga0068865_100139719
299 Ga0068865_100512814
300 Ga0105240_10021886
301 Ga0105240_10058607
302 Ga0105240_10094741
303 Ga0105240_10114362
304 Ga0105240_10560770
305 Ga0111539_10292924
306 Ga0105245_10012533
307 Ga0105245_10012928
308 Ga0105247_10333584
309 Ga0105243_10113255
310 Ga0105241_10021254
311 Ga0105241_10100790
312 Ga0105241_10357372
313 Ga0105242_10295339
314 Ga0105248_10230724
315 Ga0105237_10124036
316 Ga0105237_10483291
317 Ga0105237_10490304
318 Ga0105238_10079306
319 Ga0105238_10098987
320 Ga0105238_10396276
321 Ga0105238_10422790
322 Ga0105249_10487270
323 Ga0105239_10310322
324 Ga0105246_10020128
325 Ga0105246_10304015
326 Ga0157370_10067735
327 Ga0157370_10380094
328 Ga0157369_10433940
329 Ga0157374_10312547
330 Ga0157374_10352022
331 Ga0157378_10040005
332 Ga0157378_10088027
333 Ga0157378_10424502
334 Ga0163162_10241462
335 Ga0163162_10450837
336 Ga0157372_10014988
337 Ga0163163_10000002
338 Ga0157380_10166087
339 Ga0157380_10176206
340 Ga0157379_10000852
341 Ga0157379_10154223
342 Ga0157379_10333772
343 Ga0157379_10496799
344 Ga0157376_10215590
345 Ga0157376_10222934
346 Ga0157376_10701756
347 Ga0209233_1000045
348 Ga0209233_1001578
349 Ga0209233_1047434
350 Ga0209758_1000008
351 Ga0207680_10040878
352 Ga0207680_10042403
353 Ga0207680_10064136
354 Ga0207645_10291164
355 Ga0207643_10178738
356 Ga0207705_10001563
357 Ga0207654_10165828
358 Ga0207695_10079346
359 Ga0207695_10109234
360 Ga0207695_10145968
361 Ga0207695_10204723
362 Ga0207695_10250849
363 Ga0207695_10378643
364 Ga0207695_10410094
365 Ga0207671_10077087
366 Ga0207671_10104446
367 Ga0207671_10310136
368 Ga0207671_10483516
369 Ga0207660_10129420
370 Ga0207657_10019080
371 Ga0207657_10101434
372 Ga0207649_10733832
373 Ga0207652_10220236
374 Ga0207694_10245476
375 Ga0207694_10262045
376 Ga0207694_10314008
377 Ga0207659_10206682
378 Ga0207687_10006766
379 Ga0207686_10196759
380 Ga0207709_10064608
381 Ga0207704_10104413
382 Ga0207704_10122343
383 Ga0207704_10131383
384 Ga0207711_10140655
385 Ga0207689_10050551
386 Ga0207679_10924897
387 Ga0207667_10030381
388 Ga0207667_10348397
389 Ga0207667_10465730
390 Ga0207667_10544612
391 Ga0207640_10623074
392 Ga0207658_10381123
393 Ga0207677_10097829
394 Ga0207703_10251770
395 Ga0207703_10664642
396 Ga0207639_10155393
397 Ga0207702_10446732
398 Ga0207648_10016157
399 Ga0207676_10272689
400 Ga0207674_10113047
401 Ga0207674_10414611
402 Ga0207675_100247821
403 Ga0207683_10063703
404 Ga0207683_10154401
405 Ga0268266_10000381
406 Ga0268266_10010455
407 Ga0268266_10021060
408 Ga0268266_10048664
409 Ga0268266_10103383
410 Ga0268266_10128362
411 Ga0268266_10148165
412 Ga0268266_10409376
413 Ga0268265_10759155
414 Ga0265318_10000581
415 Ga0265338_10175004
416 Ga0265332_10169570
417 Ga0265320_10217037
418 Ga0265325_10015449
419 Ga0265325_10155806
420 Ga0265340_10159765
421 Ga0265331_10028118
422 Ga0265316_10092327
423 Ga0265313_10001846
424 Ga0265313_10002833
425 Ga0265314_10048917
426 Ga0265314_10110174
427 Ga0265314_10332261
428 Ga0265342_10031944
429 Ga0307516_10160141
430 Ga0307510_10417452
431 Ga0373937_0088379
432 Ga0395900_0043928
433 Ga0439460_0048787
434 Ga0495592_0268891
435 Ga0495580_0389943
436 Ga0495664_0107009
437 Ga0495630_0161728
438 Ga0495665_0172641
439 Ga0495640_0253834
440 Ga0495621_0115042
441 Ga0495622_0036678
442 Ga0495634_0059840
443 Ga0495625_0222549
444 Ga0495674_0196490
445 Ga0495672_0035290
446 Ga0501032_0082294
447 Ga0501033_0008866
448 Ga0501033_0047244
449 Ga0501033_0058561
450 Ga0501033_0086682
451 Ga0501034_0419051
452 Ga0501036_0140609
453 Ga0501037_0087833
454 Ga0501038_0535514
455 Ga0501039_0214616
456 Ga0501043_0024418
457 Ga0501046_0003957
458 Ga0501047_0008827
459 Ga0501047_0231428
460 Ga0501073_0014236
461 Ga0501073_0029640
462 Ga0501073_0103898
463 Ga0501080_0014544
464 Ga0501083_0115981
465 Ga0501035_0033185
466 Ga0501035_0036679
467 Ga0501035_0080671
468 Ga0501035_0165370
469 Ga0501044_0005030
470 Ga0501044_0087716
471 Ga0501044_0112284
472 Ga0501044_0364967
473 Ga0501044_0408589
474 Ga0500643_000023
475 Ga0500641_0028649
476 Ga0500595_000623
477 Ga0500595_030332
478 Ga0500642_0236691
479 Ga0500559_0036853
480 Ga0500568_0032459
481 Ga0500573_0000002
482 Ga0501082_0154280

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01323

DSBA

DSBA-like thioredoxin domain

82

226

0.9

PF13462

Thioredoxin_4

Thioredoxin

67

223

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
7rgv-assembly1.cif.gz_A structure of caulobacter crescentus suppressor of copper sensitivity protein c 0.9538 21 218
3gyk-assembly4.cif.gz_D the crystal structure of a thioredoxin-like oxidoreductase from silicibacter pomeroyi dss-3 0.9422 51 219
4gxz-assembly3.cif.gz_C crystal structure of a periplasmic thioredoxin-like protein from salmonella enterica serovar typhimurium 0.9194 50 219
3gyk-assembly4.cif.gz_D the crystal structure of a thioredoxin-like oxidoreductase from silicibacter pomeroyi dss-3 0.9167 51 219
6nen-assembly1.cif.gz_A catalytic domain of proteus mirabilis scsc 0.902 43 219
ID Description Score Start End Superfamily
3gykA00 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.9459 48 218 3.40.30.10
3gykA00 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.9242 48 218 3.40.30.10
af_Q655X0_59_172_3.40.30.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.9072 69 103 3.40.30.10
af_I1K367_67_180_3.40.30.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.8853 69 103 3.40.30.10
af_B4FH04_90_206_3.40.30.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.879 66 103 3.40.30.10
ID Description Score Start End GO Terms
AF-K4MWQ7-F1-model_v4 Outer membrane protein 0.9882 60 179 GO:0016491
AF-A0A386JUY2-F1-model_v4 27 kDa outer membrane protein 0.9875 53 169 GO:0016491
AF-A0A1S5WJ03-F1-model_v4 27kDa outer membrane protein 0.9837 75 175 GO:0016491
AF-A0A6B9KVW2-F1-model_v4 Capsular outer membrane protein 0.9734 25 166 GO:0016491
AF-A0A7V9MZ58-F1-model_v4 Thioredoxin domain-containing protein 0.9727 1 219 GO:0015036

Map