F354057

General Info

Members Datasets Scaffolds Average Seq Length
241 161 232 1040

Family's Representative Sequence

Representative Sequence 3300046616|Ga0495668_0000384|Ga0495668_0000384_17632_20928
Length 1098
Sequence MSNKKYWQNFGDYNQSEAFQKSNEKEFQEELLPLEDLDGKGLLDAKTPRRDFLKYLGFSTAAAAIAASCEMPVRKAVPYLQRPDDIIPGVPNYYASTYVNGGDAISVVVKQRDGRPIKIEGNELSALTKGGTSAQSQASVLDLYDPTRLRHPLQKTGADFKEIPSFDIFDQMVGSAIGAIAGKPLVLLTSTIHSPSTLQIITEFLAKYPGSRHVQYDAVSYSGMLLANEAAYGKKALPQYRFDKAKTIVSLGADFLGTWLSPTEFSKGYAENKKVKGDKPELSRHIQFESMMSLTGSNADDRYTHKPSETGNIALALLSKLGGAVAAPALNAELAKAVEKTAGILAANKGTSLVVCGSNDVNIQLVVNAINEAIGANGTTINWAVTSNIRKGIDTDMVNLAKDMANGAIGGLMIYDCNPVYSYADGAAFGASLAKLPLSVSFNSTMDETAELCKFILPSHHWLESWGDTEATTGYVSLIQPIIYPLFKTRPFQTSLLKWSGKTAVTTTVAPTVPAASVNAKDTTSKMIAVQSHTGGDVYENYFKNYWSGKLGNTDAWEKALQDGVIQPAAMPEGGAAYSAGALAXXXXKIATIKGGAHEVVLYQKISIGTGSQANNPWLQELPDPISKVTWDNYAMVSPALAKEMFGFDVANPDSAKEADKYEVHPEKPVMKITVGKTTLALPILIIPGLHPSTVAIAVGYGRKSSNTDRDINLDRIGRAAYGSGENAYPMTGFDGVTMSYNMPATLEKTGETYPLAQTQVHGSSESRPVIYETSLEEYRKNPLEVLAEPRHEREEITPYGKEDYVKDATIYPDYEKPGIKWGMSIDLNTCTGCSACVVACTAENNVSVVGKIQVQRAHEMHWLRIDRYFTGDMNNPDVVFQPMLCQHCDNAPCENVCPVAATNHSSEGLNQMTYNRCIGTRYCANNCPYKVRRFNWLDYNGADSFPNNQKPLLGVDTNEVTVQMNDDLTRMVLNPDVTVRSRGVIEKCSFCVQRLQDSKLEAKKQQDPSLVRNVKVACAQACPSDCITFGNVNDKESEVYKIRNVEQVNRNFYVLEQLHVLPNVSYLAKIKNTDRKVTNEKEEGHMEAVHTEEKAHA

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2818991444 Filimonas endophytica 3197 Isolate Unclassified
3 2818991460 Chitinophaga polysaccharea 1209 Isolate Unclassified
4 2840677318 Chitinophaga alhagiae T22 Isolate Unclassified
5 2883068021 Chitinophaga rhizosphaerae T16R-86 Isolate Rhizosphere
6 2896085136 Chitinophaga alhagiae T22 Isolate Unclassified
7 2896109856 Chitinophaga sp. SYP-B3965 Isolate Rhizosphere
8 2914759650 Rhizosphaericola mali Isolate Rhizosphere
9 2929154850 Filimonas sp. R-72421 Hybrid assembly Isolate Unclassified
10 2929239360 Chitinophaga sp. R-73072 Hybrid assembly Isolate Unclassified
11 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
12 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
13 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
14 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
15 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
16 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
17 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
18 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
19 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
20 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
21 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
22 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
23 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
24 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
25 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
26 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
27 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
28 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
29 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
30 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
31 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
32 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
33 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
34 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
35 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
36 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
37 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
38 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
39 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
40 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
41 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
42 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
43 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
44 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
45 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
46 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
47 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
48 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
49 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
50 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
51 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
52 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
53 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
54 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
55 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
56 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
57 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
58 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
59 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
60 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
61 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
62 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
63 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
64 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
65 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
66 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
67 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
68 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
69 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
70 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
71 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
72 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
73 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
74 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
75 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
76 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
77 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
78 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
79 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
80 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
81 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
82 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
83 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
84 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
85 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
86 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
87 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
88 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
89 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
90 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
91 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
92 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
93 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
116 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
117 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
118 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
119 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
120 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
121 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
122 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
123 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
124 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
125 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
126 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
127 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
128 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
129 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
130 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
131 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
132 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
133 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
134 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
135 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
136 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
137 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
139 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
143 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
147 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
148 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
149 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
150 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
151 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
152 3300049763 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_A_4_control Metagenome Rhizosphere
153 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
154 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
155 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
156 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
157 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
158 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
159 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
160 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere
161 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.27
Metatranscriptomes 0
Isolates 3.73

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.71
Nodule 0
Rhizoplane 0.41
Rhizosphere 86.31
Stem 0
Stem Tuber 0
Unclassified 4.56

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_677025 2162886007 Bacteria 181955
2 JGI24739J22299_10000037 3300001989 Bacteria 36627
3 JGI24751J29686_10002166 3300002459 Bacteria 3991
4 JGI25406J46586_10003271 3300003203 Bacteria 7626
5 JGI25160J50197_1001012 3300003354 Bacteria 14593
6 JGI25160J50197_1001910 3300003354 Bacteria 9978
7 Ga0055528_1000076 3300003790 Bacteria 76002
8 Ga0055530_10000023 3300003791 Bacteria 135890
9 Ga0055531_10000005 3300003794 Bacteria 242179
10 Ga0065165_1000110 3300005262 Bacteria 137063
11 Ga0065714_10065508 3300005288 Bacteria 9697
12 Ga0065704_10070133 3300005289 Bacteria 1266035
13 Ga0065704_10071276 3300005289 Bacteria 12024
14 Ga0070658_10017374 3300005327 Bacteria 5756
15 Ga0070658_10034008 3300005327 Bacteria 4102
16 Ga0070658_10049584 3300005327 Bacteria 3401
17 Ga0070683_100001729 3300005329 Bacteria 16990
18 Ga0070683_100005726 3300005329 Bacteria 10387
19 Ga0070690_100009060 3300005330 Bacteria 5755
20 Ga0070670_100020217 3300005331 Bacteria 5721
21 Ga0070670_100056512 3300005331 Bacteria 3368
22 Ga0068869_100008253 3300005334 Bacteria 6707
23 Ga0070666_10012725 3300005335 Bacteria 5317
24 Ga0070680_100011059 3300005336 Bacteria 6974
25 Ga0070682_100000012 3300005337 Bacteria 265658
26 Ga0070682_100003764 3300005337 Bacteria 8430
27 Ga0070660_100002179 3300005339 Bacteria 13502
28 Ga0070660_100004303 3300005339 Bacteria 9835
29 Ga0070660_100018344 3300005339 Bacteria 5112
30 Ga0070691_10000640 3300005341 Bacteria 13520
31 Ga0070661_100007918 3300005344 Bacteria 7339
32 Ga0070661_100017380 3300005344 Bacteria 5102
33 Ga0070668_100001487 3300005347 Bacteria 16922
34 Ga0070669_100030121 3300005353 Bacteria 3914
35 Ga0070675_100010438 3300005354 Bacteria 7257
36 Ga0070673_100002504 3300005364 Bacteria 11202
37 Ga0070673_100034392 3300005364 Bacteria 3835
38 Ga0070688_100007470 3300005365 Bacteria 5897
39 Ga0070659_100003202 3300005366 Bacteria 11649
40 Ga0070662_100001127 3300005457 Bacteria 16320
41 Ga0070662_100006313 3300005457 Bacteria 7637
42 Ga0070681_10028854 3300005458 Bacteria 5575
43 Ga0068867_100002814 3300005459 Bacteria 12228
44 Ga0070698_100001240 3300005471 Bacteria 28441
45 Ga0070698_100001314 3300005471 Bacteria 27660
46 Ga0070698_100021094 3300005471 Bacteria 6824
47 Ga0070684_100016663 3300005535 Bacteria 6012
48 Ga0070684_100048606 3300005535 Bacteria 3680
49 Ga0068853_100003093 3300005539 Bacteria 12715
50 Ga0068853_100005413 3300005539 Bacteria 10003
51 Ga0068853_100032332 3300005539 Bacteria 4432
52 Ga0070672_100003343 3300005543 Bacteria 10394
53 Ga0070665_100013506 3300005548 Bacteria 8215
54 Ga0068855_100001122 3300005563 Bacteria 33246
55 Ga0068855_100031152 3300005563 Bacteria 6371
56 Ga0068855_100069217 3300005563 Bacteria 4107
57 Ga0068855_100081850 3300005563 Bacteria 3742
58 Ga0070664_100002665 3300005564 Bacteria 14400
59 Ga0068857_100003490 3300005577 Bacteria 13120
60 Ga0068857_100030241 3300005577 Bacteria 4780
61 Ga0068856_100013213 3300005614 Bacteria 7996
62 Ga0068852_100004150 3300005616 Bacteria 10206
63 Ga0068852_100005787 3300005616 Bacteria 8873
64 Ga0068859_100000592 3300005617 Bacteria 36168
65 Ga0068859_100002273 3300005617 Bacteria 19500
66 Ga0068859_100008633 3300005617 Bacteria 10295
67 Ga0068864_100035352 3300005618 Bacteria 4253
68 Ga0068863_100031323 3300005841 Bacteria 5076
69 Ga0068863_100054426 3300005841 Bacteria 3791
70 Ga0068858_100002187 3300005842 Bacteria 19799
71 Ga0068860_100003814 3300005843 Bacteria 15504
72 Ga0068860_100007541 3300005843 Bacteria 10883
73 Ga0068862_100002954 3300005844 Bacteria 14850
74 Ga0081539_10002627 3300005985 Bacteria 24558
75 Ga0081539_10002693 3300005985 Bacteria 24106
76 Ga0097621_100009317 3300006237 Bacteria 7125
77 Ga0097621_100030754 3300006237 Bacteria 4254
78 Ga0097621_100045627 3300006237 Bacteria 3541
79 Ga0068871_100002355 3300006358 Bacteria 12882
80 Ga0068871_100009343 3300006358 Bacteria 7100
81 Ga0068871_100046977 3300006358 Bacteria 3479
82 Ga0075428_100049040 3300006844 Bacteria 4633
83 Ga0075430_100022282 3300006846 Bacteria 5388
84 Ga0075431_100028452 3300006847 Bacteria 5744
85 Ga0097620_100000592 3300006931 Bacteria 36168
86 Ga0097620_100002273 3300006931 Bacteria 19500
87 Ga0097620_100008633 3300006931 Bacteria 10295
88 Ga0105240_10010519 3300009093 Bacteria 12997
89 Ga0111539_10023215 3300009094 Bacteria 7619
90 Ga0111539_10023829 3300009094 Bacteria 7521
91 Ga0105247_10001033 3300009101 Bacteria 20949
92 Ga0114129_10004788 3300009147 Bacteria 19131
93 Ga0105242_10043559 3300009176 Bacteria 3631
94 Ga0105249_10004472 3300009553 Bacteria 12086
95 Ga0105249_10024004 3300009553 Bacteria 5477
96 Ga0105249_10065350 3300009553 Bacteria 3347
97 Ga0105239_10035307 3300010375 Bacteria 5491
98 Ga0105239_10038616 3300010375 Bacteria 5233
99 Ga0105246_10001264 3300011119 Bacteria 14839
100 Ga0157373_10000518 3300013100 Bacteria 30285
101 Ga0157373_10002876 3300013100 Bacteria 13026
102 Ga0157371_10000401 3300013102 Bacteria 54323
103 Ga0157371_10002490 3300013102 Bacteria 17513
104 Ga0157371_10008719 3300013102 Bacteria 8048
105 Ga0157371_10009545 3300013102 Bacteria 7632
106 Ga0157370_10002566 3300013104 Bacteria 21804
107 Ga0157370_10004058 3300013104 Bacteria 16984
108 Ga0157370_10004229 3300013104 Bacteria 16610
109 Ga0157370_10004529 3300013104 Bacteria 15925
110 Ga0157369_10004445 3300013105 Bacteria 16529
111 Ga0157369_10025151 3300013105 Bacteria 6611
112 Ga0157369_10049352 3300013105 Bacteria 4563
113 Ga0157374_10002056 3300013296 Bacteria 16922
114 Ga0157374_10002752 3300013296 Bacteria 14766
115 Ga0157374_10007445 3300013296 Bacteria 9338
116 Ga0157378_10007179 3300013297 Bacteria 9729
117 Ga0163162_10003305 3300013306 Bacteria 15432
118 Ga0163162_10015011 3300013306 Bacteria 7566
119 Ga0163162_10030490 3300013306 Bacteria 5343
120 Ga0157372_10020732 3300013307 Bacteria 7096
121 Ga0157375_10006781 3300013308 Bacteria 9977
122 Ga0163163_10001998 3300014325 Bacteria 17228
123 Ga0157377_10008655 3300014745 Bacteria 4969
124 Ga0157379_10003755 3300014968 Bacteria 12918
125 Ga0157376_10011619 3300014969 Bacteria 6500
126 Ga0213876_10003744 3300021384 Bacteria 8626
127 Ga0209258_100029 3300025242 Bacteria 490648
128 Ga0209148_1000194 3300025254 Bacteria 112740
129 Ga0209673_1000501 3300025273 Bacteria 64685
130 Ga0209564_1010675 3300025295 Bacteria 4199
131 Ga0209050_1000216 3300025298 Bacteria 128896
132 Ga0207426_1000040 3300025302 Bacteria 433920
133 Ga0207426_1002713 3300025302 Bacteria 10779
134 Ga0209257_1000004 3300025304 Bacteria 1678347
135 Ga0209257_1002442 3300025304 Bacteria 18483
136 Ga0207680_10006165 3300025903 Bacteria 5785
137 Ga0207645_10000385 3300025907 Bacteria 36499
138 Ga0207705_10008701 3300025909 Bacteria 7395
139 Ga0207705_10022687 3300025909 Bacteria 4477
140 Ga0207705_10023634 3300025909 Bacteria 4384
141 Ga0207654_10005079 3300025911 Bacteria 6638
142 Ga0207707_10006526 3300025912 Bacteria 10186
143 Ga0207657_10008173 3300025919 Bacteria 10659
144 Ga0207649_10010196 3300025920 Bacteria 5158
145 Ga0207652_10000258 3300025921 Bacteria 55325
146 Ga0207652_10001428 3300025921 Bacteria 21177
147 Ga0207652_10010837 3300025921 Bacteria 7346
148 Ga0207706_10006233 3300025933 Bacteria 11084
149 Ga0207706_10009185 3300025933 Bacteria 9086
150 Ga0207686_10002365 3300025934 Bacteria 10310
151 Ga0207670_10002414 3300025936 Bacteria 9794
152 Ga0207691_10001280 3300025940 Bacteria 25134
153 Ga0207691_10037840 3300025940 Bacteria 4466
154 Ga0207689_10001049 3300025942 Bacteria 26546
155 Ga0207689_10001761 3300025942 Bacteria 20418
156 Ga0207689_10002381 3300025942 Bacteria 17551
157 Ga0207689_10036712 3300025942 Bacteria 4068
158 Ga0207712_10012493 3300025961 Bacteria 5427
159 Ga0207658_10005514 3300025986 Bacteria 8671
160 Ga0207703_10018278 3300026035 Bacteria 5474
161 Ga0207641_10006308 3300026088 Bacteria 10025
162 Ga0207648_10001955 3300026089 Bacteria 22528
163 Ga0207648_10014990 3300026089 Bacteria 7139
164 Ga0207648_10027025 3300026089 Bacteria 5096
165 Ga0207674_10002491 3300026116 Bacteria 23220
166 Ga0207674_10007475 3300026116 Bacteria 12733
167 Ga0207674_10016488 3300026116 Bacteria 8086
168 Ga0207675_100000282 3300026118 Bacteria 48883
169 Ga0207675_100038102 3300026118 Bacteria 4486
170 Ga0207683_10000957 3300026121 Bacteria 26469
171 Ga0268266_10027740 3300028379 Bacteria 4814
172 Ga0307515_10000001 3300028794 Bacteria 4259510
173 Ga0307515_10002982 3300028794 Bacteria 35942
174 Ga0265327_10000013 3300031251 Bacteria 519549
175 Ga0307406_10007175 3300031901 Bacteria 6173
176 Ga0307414_10008247 3300032004 Bacteria 5896
177 Ga0307411_10007736 3300032005 Bacteria 5505
178 Ga0395900_0033795 3300037418 Bacteria 5262
179 Ga0395905_0019253 3300037471 Bacteria 6472
180 Ga0395901_0025398 3300038443 Bacteria 6081
181 Ga0436365_0450427 3300039437 Bacteria 29342
182 Ga0439457_000079 3300042014 Bacteria 21395
183 Ga0466972_0000001 3300044658 Bacteria 412457
184 Ga0466972_0000080 3300044658 Bacteria 89226
185 Ga0466966_0000096 3300044684 Bacteria 54307
186 Ga0453684_0005320 3300044712 Bacteria 25644
187 Ga0453684_0021992 3300044712 Bacteria 9490
188 Ga0453684_0067395 3300044712 Bacteria 4551
189 Ga0466957_0003737 3300044842 Bacteria 8414
190 Ga0466959_0000014 3300045049 Bacteria 150962
191 Ga0466959_0014327 3300045049 Bacteria 5756
192 Ga0495633_0000036 3300046558 Bacteria 184999
193 Ga0495668_0000384 3300046616 Bacteria 58265
194 Ga0495636_0000116 3300047318 Bacteria 33107
195 Ga0495672_0009536 3300047320 Bacteria 7023
196 Ga0495686_0001575 3300047472 Bacteria 24161
197 Ga0496114_0002141 3300048917 Bacteria 15014
198 Ga0496121_0000082 3300048924 Bacteria 228557
199 Ga0501031_0008289 3300049568 Bacteria 6759
200 Ga0501032_0004884 3300049569 Bacteria 10033
201 Ga0501034_0000152 3300049571 Bacteria 130576
202 Ga0501034_0006265 3300049571 Bacteria 12798
203 Ga0501034_0007824 3300049571 Bacteria 11368
204 Ga0501034_0039638 3300049571 Bacteria 4771
205 Ga0501034_0072821 3300049571 Bacteria 3444
206 Ga0501037_0009866 3300049573 Bacteria 7006
207 Ga0501037_0014235 3300049573 Bacteria 5859
208 Ga0501038_0002256 3300049574 Bacteria 17927
209 Ga0501038_0003120 3300049574 Bacteria 15461
210 Ga0501039_0016490 3300049575 Bacteria 5659
211 Ga0501043_0002067 3300049579 Bacteria 17117
212 Ga0501046_0031003 3300049580 Bacteria 4338
213 Ga0501047_0008193 3300049581 Bacteria 9873
214 Ga0501048_0002001 3300049582 Bacteria 15480
215 Ga0501068_0007366 3300049584 Bacteria 6093
216 Ga0501070_0007289 3300049586 Bacteria 9390
217 Ga0501074_0001847 3300049590 Bacteria 14526
218 Ga0501079_0032779 3300049741 Bacteria 3996
219 Ga0501083_0007969 3300049744 Bacteria 7500
220 Ga0501266_000282 3300049763 Bacteria 6681
221 Ga0501035_0001762 3300049822 Bacteria 21856
222 Ga0501035_0028811 3300049822 Bacteria 5067
223 Ga0501044_0003029 3300049823 Bacteria 19020
224 Ga0501044_0004698 3300049823 Bacteria 15272
225 nmdc:mga05p37_3268_c1 3300050507 Bacteria 18878
226 Ga0500583_0000001 3300053092 Bacteria 241642
227 Ga0500562_000070 3300053108 Bacteria 49835
228 Ga0500568_0000380 3300053139 Bacteria 33995
229 Ga0500622_0000085 3300053156 Bacteria 100276
230 Ga0500622_0000462 3300053156 Bacteria 38552
231 Ga0500611_000003 3300053727 Bacteria 333431
232 Ga0501084_0030198 3300054114 Bacteria 4533

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300049822 Ga0501035_0028811 Ga0501035_0028811_40_2901 897
2 3300049571 Ga0501034_0039638 Ga0501034_0039638_75_2954 902
3 3300028794 Ga0307515_10002982 Ga0307515_1000298213 905
4 3300049568 Ga0501031_0008289 Ga0501031_0008289_3864_6749 905
5 3300049580 Ga0501046_0031003 Ga0501046_0031003_57_3011 928
6 3300005341 Ga0070691_10000640 Ga0070691_100006409 936
7 3300044712 Ga0453684_0005320 Ga0453684_0005320_2153_5149 938
8 3300005617 Ga0068859_100008633 Ga0068859_1000086336 950
9 3300005843 Ga0068860_100007541 Ga0068860_1000075413 950
10 3300006931 Ga0097620_100008633 Ga0097620_1000086336 950
11 3300009553 Ga0105249_10065350 Ga0105249_100653501 953
12 3300005354 Ga0070675_100010438 Ga0070675_1000104382 957
13 3300005577 Ga0068857_100003490 Ga0068857_1000034906 957
14 3300005844 Ga0068862_100002954 Ga0068862_1000029542 957
15 3300009094 Ga0111539_10023215 Ga0111539_100232154 957
16 3300009094 Ga0111539_10023829 Ga0111539_100238292 957
17 3300009553 Ga0105249_10024004 Ga0105249_100240041 957
18 3300026116 Ga0207674_10002491 Ga0207674_100024915 957
19 3300026118 Ga0207675_100000282 Ga0207675_10000028246 957
20 3300005364 Ga0070673_100034392 Ga0070673_1000343921 959
21 3300044658 Ga0466972_0000080 Ga0466972_0000080_5908_9102 962
22 3300010375 Ga0105239_10035307 Ga0105239_100353072 963
23 3300006358 Ga0068871_100046977 Ga0068871_1000469771 965
24 3300013306 Ga0163162_10030490 Ga0163162_100304902 965
25 3300049763 Ga0501266_000282 Ga0501266_000282_1394_4576 965
26 3300005365 Ga0070688_100007470 Ga0070688_1000074704 966
27 3300005841 Ga0068863_100054426 Ga0068863_1000544262 966
28 3300013100 Ga0157373_10000518 Ga0157373_1000051826 966
29 3300013102 Ga0157371_10008719 Ga0157371_100087192 966
30 3300013105 Ga0157369_10049352 Ga0157369_100493522 966
31 3300037418 Ga0395900_0033795 Ga0395900_0033795_65_3334 966
32 3300049571 Ga0501034_0072821 Ga0501034_0072821_13_3099 967
33 3300005336 Ga0070680_100011059 Ga0070680_1000110593 968
34 3300005539 Ga0068853_100032332 Ga0068853_1000323322 968
35 3300009093 Ga0105240_10010519 Ga0105240_100105197 968
36 3300009101 Ga0105247_10001033 Ga0105247_1000103320 968
37 3300013104 Ga0157370_10004529 Ga0157370_100045298 968
38 3300025911 Ga0207654_10005079 Ga0207654_100050791 968
39 3300025912 Ga0207707_10006526 Ga0207707_100065266 968
40 3300025921 Ga0207652_10001428 Ga0207652_1000142813 968
41 3300044842 Ga0466957_0003737 Ga0466957_0003737_1875_5024 968
42 3300053092 Ga0500583_0000001 Ga0500583_0000001_10793_13945 968
43 3300026088 Ga0207641_10006308 Ga0207641_100063082 969
44 3300005331 Ga0070670_100020217 Ga0070670_1000202172 972
45 3300009147 Ga0114129_10004788 Ga0114129_100047885 972
46 3300009553 Ga0105249_10004472 Ga0105249_100044727 972
47 3300025961 Ga0207712_10012493 Ga0207712_100124933 972
48 3300049571 Ga0501034_0007824 Ga0501034_0007824_1794_5006 972
49 3300050507 nmdc:mga05p37_3268_c1 nmdc:mga05p37_3268_c1_1869_5027 972
50 3300002459 JGI24751J29686_10002166 JGI24751J29686_100021661 973
51 3300025909 Ga0207705_10023634 Ga0207705_100236342 974
52 3300049823 Ga0501044_0004698 Ga0501044_0004698_7208_10342 974
53 3300006237 Ga0097621_100045627 Ga0097621_1000456272 975
54 3300013104 Ga0157370_10004229 Ga0157370_1000422910 975
55 3300053156 Ga0500622_0000462 Ga0500622_0000462_13654_16785 975
56 3300005334 Ga0068869_100008253 Ga0068869_1000082532 976
57 3300053108 Ga0500562_000070 Ga0500562_000070_27257_30391 976
58 3300005841 Ga0068863_100031323 Ga0068863_1000313233 979
59 3300044712 Ga0453684_0021992 Ga0453684_0021992_1026_4193 980
60 3300044712 Ga0453684_0067395 Ga0453684_0067395_1368_4511 981
61 3300049569 Ga0501032_0004884 Ga0501032_0004884_2118_5282 981
62 3300049571 Ga0501034_0000152 Ga0501034_0000152_90616_93882 981
63 3300049571 Ga0501034_0006265 Ga0501034_0006265_6148_9312 981
64 3300049573 Ga0501037_0009866 Ga0501037_0009866_1996_5160 981
65 3300049574 Ga0501038_0003120 Ga0501038_0003120_9745_12909 981
66 3300049575 Ga0501039_0016490 Ga0501039_0016490_1390_4554 981
67 3300049579 Ga0501043_0002067 Ga0501043_0002067_926_4090 981
68 3300049581 Ga0501047_0008193 Ga0501047_0008193_1827_4991 981
69 3300049582 Ga0501048_0002001 Ga0501048_0002001_11781_14945 981
70 3300049584 Ga0501068_0007366 Ga0501068_0007366_1501_4665 981
71 3300049586 Ga0501070_0007289 Ga0501070_0007289_2589_5753 981
72 3300049590 Ga0501074_0001847 Ga0501074_0001847_9450_12614 981
73 3300049741 Ga0501079_0032779 Ga0501079_0032779_678_3842 981
74 3300049744 Ga0501083_0007969 Ga0501083_0007969_2538_5702 981
75 3300049822 Ga0501035_0001762 Ga0501035_0001762_16489_19653 981
76 3300049823 Ga0501044_0003029 Ga0501044_0003029_13401_16565 981
77 3300053727 Ga0500611_000003 Ga0500611_000003_216807_220001 981
78 iso_pu_bacteria 2840677318 2840678571 981
79 iso_pu_bacteria 2896085136 2896086389 981
80 3300026118 Ga0207675_100038102 Ga0207675_1000381022 983
81 3300005471 Ga0070698_100001314 Ga0070698_10000131411 985
82 3300005459 Ga0068867_100002814 Ga0068867_1000028145 986
83 3300006844 Ga0075428_100049040 Ga0075428_1000490402 986
84 3300006847 Ga0075431_100028452 Ga0075431_1000284522 986
85 3300021384 Ga0213876_10003744 Ga0213876_100037445 986
86 3300025942 Ga0207689_10001761 Ga0207689_100017612 986
87 3300026089 Ga0207648_10014990 Ga0207648_100149902 986
88 3300039437 Ga0436365_0450427 Ga0436365_0450427_15942_19028 986
89 3300003203 JGI25406J46586_10003271 JGI25406J46586_100032712 987
90 3300005327 Ga0070658_10017374 Ga0070658_100173744 987
91 3300005335 Ga0070666_10012725 Ga0070666_100127252 987
92 3300005347 Ga0070668_100001487 Ga0070668_10000148713 987
93 3300005364 Ga0070673_100002504 Ga0070673_1000025043 987
94 3300005457 Ga0070662_100001127 Ga0070662_1000011273 987
95 3300005543 Ga0070672_100003343 Ga0070672_1000033435 987
96 3300005548 Ga0070665_100013506 Ga0070665_1000135065 987
97 3300005563 Ga0068855_100031152 Ga0068855_1000311523 987
98 3300005842 Ga0068858_100002187 Ga0068858_1000021873 987
99 3300005843 Ga0068860_100003814 Ga0068860_1000038148 987
100 3300005985 Ga0081539_10002693 Ga0081539_100026932 987
101 3300006237 Ga0097621_100009317 Ga0097621_1000093173 987
102 3300010375 Ga0105239_10038616 Ga0105239_100386162 987
103 3300013296 Ga0157374_10002056 Ga0157374_100020566 987
104 3300013306 Ga0163162_10003305 Ga0163162_100033057 987
105 3300014968 Ga0157379_10003755 Ga0157379_100037558 987
106 3300014969 Ga0157376_10011619 Ga0157376_100116193 987
107 3300025903 Ga0207680_10006165 Ga0207680_100061653 987
108 3300025909 Ga0207705_10022687 Ga0207705_100226872 987
109 3300025933 Ga0207706_10009185 Ga0207706_100091852 987
110 3300025940 Ga0207691_10001280 Ga0207691_100012808 987
111 3300025986 Ga0207658_10005514 Ga0207658_100055143 987
112 3300026035 Ga0207703_10018278 Ga0207703_100182783 987
113 3300026089 Ga0207648_10001955 Ga0207648_100019556 987
114 3300028379 Ga0268266_10027740 Ga0268266_100277402 987
115 iso_pu_bacteria 2818991444 2819585782 987
116 iso_pu_bacteria 2929154850 2929159458 987
117 3300005458 Ga0070681_10028854 Ga0070681_100288543 988
118 3300005563 Ga0068855_100001122 Ga0068855_10000112228 988
119 3300013102 Ga0157371_10002490 Ga0157371_1000249010 988
120 3300013104 Ga0157370_10002566 Ga0157370_100025666 988
121 3300013105 Ga0157369_10004445 Ga0157369_100044453 988
122 3300038443 Ga0395901_0025398 Ga0395901_0025398_1132_4398 988
123 iso_pu_bacteria 2914759650 2914763374 988
124 3300005339 Ga0070660_100002179 Ga0070660_1000021795 989
125 3300044658 Ga0466972_0000001 Ga0466972_0000001_397166_400294 989
126 3300005289 Ga0065704_10071276 Ga0065704_100712764 990
127 3300005329 Ga0070683_100001729 Ga0070683_1000017299 990
128 3300005331 Ga0070670_100056512 Ga0070670_1000565121 990
129 3300005344 Ga0070661_100007918 Ga0070661_1000079183 990
130 3300005535 Ga0070684_100016663 Ga0070684_1000166633 990
131 3300005539 Ga0068853_100005413 Ga0068853_1000054132 990
132 3300005564 Ga0070664_100002665 Ga0070664_1000026653 990
133 3300005577 Ga0068857_100030241 Ga0068857_1000302412 990
134 3300005618 Ga0068864_100035352 Ga0068864_1000353522 990
135 3300013296 Ga0157374_10002752 Ga0157374_100027524 990
136 3300013308 Ga0157375_10006781 Ga0157375_100067817 990
137 3300014325 Ga0163163_10001998 Ga0163163_1000199810 990
138 3300014745 Ga0157377_10008655 Ga0157377_100086552 990
139 3300025920 Ga0207649_10010196 Ga0207649_100101962 990
140 3300025936 Ga0207670_10002414 Ga0207670_100024143 990
141 3300025940 Ga0207691_10037840 Ga0207691_100378402 990
142 3300026116 Ga0207674_10007475 Ga0207674_100074756 990
143 iso_pu_bacteria 2883068021 2883071485 990
144 3300003354 JGI25160J50197_1001012 JGI25160J50197_10010125 991
145 3300005327 Ga0070658_10034008 Ga0070658_100340081 991
146 3300005327 Ga0070658_10049584 Ga0070658_100495841 991
147 3300005339 Ga0070660_100004303 Ga0070660_1000043034 991
148 3300005563 Ga0068855_100069217 Ga0068855_1000692172 991
149 3300005563 Ga0068855_100081850 Ga0068855_1000818502 991
150 3300005616 Ga0068852_100004150 Ga0068852_1000041505 991
151 3300013102 Ga0157371_10000401 Ga0157371_1000040133 991
152 3300013104 Ga0157370_10004058 Ga0157370_100040583 991
153 3300025302 Ga0207426_1000040 Ga0207426_1000040138 991
154 3300025909 Ga0207705_10008701 Ga0207705_100087014 991
155 3300025921 Ga0207652_10000258 Ga0207652_1000025831 991
156 3300025921 Ga0207652_10010837 Ga0207652_100108372 991
157 3300054114 Ga0501084_0030198 Ga0501084_0030198_627_3767 992
158 iso_pu_bacteria 2929239360 2929239907 992
159 3300003794 Ga0055531_10000005 Ga0055531_10000005172 993
160 3300005288 Ga0065714_10065508 Ga0065714_100655085 993
161 3300005985 Ga0081539_10002627 Ga0081539_1000262714 993
162 3300009176 Ga0105242_10043559 Ga0105242_100435591 993
163 3300025304 Ga0209257_1000004 Ga0209257_1000004237 993
164 3300025934 Ga0207686_10002365 Ga0207686_100023656 993
165 3300005329 Ga0070683_100005726 Ga0070683_1000057266 994
166 3300005330 Ga0070690_100009060 Ga0070690_1000090602 994
167 3300005337 Ga0070682_100003764 Ga0070682_1000037644 994
168 3300005339 Ga0070660_100018344 Ga0070660_1000183441 994
169 3300005344 Ga0070661_100017380 Ga0070661_1000173803 994
170 3300005366 Ga0070659_100003202 Ga0070659_1000032025 994
171 3300005457 Ga0070662_100006313 Ga0070662_1000063131 994
172 3300005535 Ga0070684_100048606 Ga0070684_1000486062 994
173 3300005614 Ga0068856_100013213 Ga0068856_1000132134 994
174 3300005616 Ga0068852_100005787 Ga0068852_1000057872 994
175 3300006237 Ga0097621_100030754 Ga0097621_1000307542 994
176 3300006358 Ga0068871_100002355 Ga0068871_1000023557 994
177 3300006846 Ga0075430_100022282 Ga0075430_1000222822 994
178 3300013100 Ga0157373_10002876 Ga0157373_100028764 994
179 3300013102 Ga0157371_10009545 Ga0157371_100095455 994
180 3300013105 Ga0157369_10025151 Ga0157369_100251512 994
181 3300013296 Ga0157374_10007445 Ga0157374_100074457 994
182 3300013297 Ga0157378_10007179 Ga0157378_100071792 994
183 3300013306 Ga0163162_10015011 Ga0163162_100150112 994
184 3300013307 Ga0157372_10020732 Ga0157372_100207325 994
185 3300025919 Ga0207657_10008173 Ga0207657_100081737 994
186 3300025933 Ga0207706_10006233 Ga0207706_100062332 994
187 iso_pu_bacteria 2818991460 2819677137 994
188 iso_pu_bacteria 2896109856 2896113313 994
189 3300005471 Ga0070698_100001240 Ga0070698_10000124012 995
190 3300005471 Ga0070698_100021094 Ga0070698_1000210943 995
191 3300006358 Ga0068871_100009343 Ga0068871_1000093435 995
192 3300044684 Ga0466966_0000096 Ga0466966_0000096_17745_20885 995
193 3300045049 Ga0466959_0000014 Ga0466959_0000014_21943_25083 995
194 3300048924 Ga0496121_0000082 Ga0496121_0000082_110205_113273 996
195 3300025242 Ga0209258_100029 Ga0209258_100029394 997
196 3300025254 Ga0209148_1000194 Ga0209148_100019414 997
197 3300025942 Ga0207689_10002381 Ga0207689_100023817 997
198 3300025942 Ga0207689_10036712 Ga0207689_100367122 997
199 3300053139 Ga0500568_0000380 Ga0500568_0000380_23852_27103 997
200 3300028794 Ga0307515_10000001 Ga0307515_100000012554 998
201 3300045049 Ga0466959_0014327 Ga0466959_0014327_204_3266 998
202 3300053156 Ga0500622_0000085 Ga0500622_0000085_54773_57856 998
203 3300001989 JGI24739J22299_10000037 JGI24739J22299_1000003734 999
204 3300003354 JGI25160J50197_1001910 JGI25160J50197_10019103 999
205 3300003790 Ga0055528_1000076 Ga0055528_100007657 999
206 3300003791 Ga0055530_10000023 Ga0055530_1000002361 999
207 3300005262 Ga0065165_1000110 Ga0065165_100011029 999
208 3300005539 Ga0068853_100003093 Ga0068853_1000030937 999
209 3300025273 Ga0209673_1000501 Ga0209673_100050142 999
210 3300025295 Ga0209564_1010675 Ga0209564_10106752 999
211 3300025298 Ga0209050_1000216 Ga0209050_100021674 999
212 3300025302 Ga0207426_1002713 Ga0207426_10027134 999
213 3300025304 Ga0209257_1002442 Ga0209257_100244213 999
214 3300026116 Ga0207674_10016488 Ga0207674_100164883 999
215 3300031251 Ga0265327_10000013 Ga0265327_10000013408 999
216 3300031901 Ga0307406_10007175 Ga0307406_100071752 999
217 3300032005 Ga0307411_10007736 Ga0307411_100077362 999
218 3300042014 Ga0439457_000079 Ga0439457_000079_13538_16705 999
219 3300046558 Ga0495633_0000036 Ga0495633_0000036_168932_172018 999
220 3300005617 Ga0068859_100000592 Ga0068859_10000059215 1000
221 3300006931 Ga0097620_100000592 Ga0097620_10000059215 1000
222 3300047320 Ga0495672_0009536 Ga0495672_0009536_1229_4432 1000
223 3300049573 Ga0501037_0014235 Ga0501037_0014235_1278_4454 1000
224 3300049574 Ga0501038_0002256 Ga0501038_0002256_10004_13180 1000
225 3300005337 Ga0070682_100000012 Ga0070682_1000000127 1001
226 3300005353 Ga0070669_100030121 Ga0070669_1000301212 1002
227 3300005617 Ga0068859_100002273 Ga0068859_10000227317 1002
228 3300006931 Ga0097620_100002273 Ga0097620_10000227317 1002
229 3300011119 Ga0105246_10001264 Ga0105246_100012643 1002
230 3300025907 Ga0207645_10000385 Ga0207645_100003852 1002
231 3300025942 Ga0207689_10001049 Ga0207689_1000104917 1002
232 3300026121 Ga0207683_10000957 Ga0207683_1000095713 1002
233 3300046616 Ga0495668_0000384 Ga0495668_0000384_17632_20928 1002
234 3300026089 Ga0207648_10027025 Ga0207648_100270252 1003
235 3300047472 Ga0495686_0001575 Ga0495686_0001575_3258_6416 1005
236 3300032004 Ga0307414_10008247 Ga0307414_100082473 1011
237 3300048917 Ga0496114_0002141 Ga0496114_0002141_6678_9932 1014
238 3300037471 Ga0395905_0019253 Ga0395905_0019253_622_3777 1020
239 3300047318 Ga0495636_0000116 Ga0495636_0000116_7910_11056 1025
240 2162886007 SwRhRL2b_contig_677025 SwRhRL2b_0927.00001910 1031
241 3300005289 Ga0065704_10070133 Ga0065704_10070133298 1031

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13247

Fer4_11

4Fe-4S dicluster domain

877

943

0.89

PF00384

Molybdopterin

Molybdopterin oxidoreductase

268

492

0.79

PF12838

Fer4_7

4Fe-4S dicluster domain

830

902

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
6lod-assembly1.cif.gz_B cryo-em structure of the air-oxidized photosynthetic alternative complex iii from roseiflexus castenholzii 0.8568 65 1019
6lod-assembly1.cif.gz_B cryo-em structure of the air-oxidized photosynthetic alternative complex iii from roseiflexus castenholzii 0.8532 65 1019
6btm-assembly1.cif.gz_B structure of alternative complex iii from flavobacterium johnsoniae (wild type) 0.8479 67 1012
6btm-assembly1.cif.gz_B structure of alternative complex iii from flavobacterium johnsoniae (wild type) 0.8453 67 1012
6f0k-assembly1.cif.gz_B alternative complex iii 0.826 69 1017
ID Description Score Start End Superfamily
1e60C01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.8721 398 450 3.40.50.740
5nqdG02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.8407 389 447 3.40.50.740
af_Q2FVV9_812_944_2.40.40.20 Mainly Beta;Beta Barrel;Barwin-like endoglucanases; 0.8364 555 647 2.40.40.20
2vpwA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.822 386 490 3.40.50.740
af_L0T2Z1_2_58_2.20.25.90 Mainly Beta;Single Sheet;N-terminal domain of TfIIb;ADC-like domains 0.7882 89 141 2.20.25.90
ID Description Score Start End GO Terms
AF-A0A520C577-F1-model_v4 Molybdopterin oxidoreductase 0.9741 138 466
AF-A0A2V9C854-F1-model_v4 Molybdopterin oxidoreductase 0.9626 331 508
AF-A0A520C577-F1-model_v4 Molybdopterin oxidoreductase 0.9429 138 466
AF-A0A519VYG8-F1-model_v4 Molybdopterin oxidoreductase 0.941 216 565
AF-A0A388Q6C3-F1-model_v4 Periplasmic binding protein domain-containing protein 0.9365 162 445

Feature Viewer

pLDDT pTM Quality
79.76 0.84 High
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Predicted Structure (AlphaFold2)

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