F354119

General Info

Members Datasets Scaffolds Average Seq Length
241 169 231 418

Family's Representative Sequence

Representative Sequence 3300049570|Ga0501033_0000338|Ga0501033_0000338_35260_36729
Length 464
Sequence MLLLSQERLVEFLLICLGHRIFIKMKRNTGKVGSQSRSCVNATASQIWNSAMFSKNLSSTLAAFALLTALLFSIIQLGPRPFFLVNDMAEGSLRNRLRHCGDGPFRKSDFSIGHRGAALQFPEHTRESYEAAARMGAGIVECDVTFTKDKELVCRHSQCDLHTTTNILETPLATKCARPFAPAQLDAAGNVIQEASAQCCTSDITLEEFKSLKGKMDGYNPAARNVAEYLRGTPGWRTDLYSGPTSGTLLTHKESIQLFMKLGVKMTPELKSASVAMPYDSDGDGVGDYTQAHYAQQMIDEYKAVNVKPGNVYAQSFDIRDIRYWIANEPQFGKQAVYLDDANTVAELPSAAQLAAYKAEGINIVAPPLFALLDIDGSGHIVPSRYARQARAAGLDIIAWTLERSGILADGHDDFYLQTFRPAVRREGDMMKVLDVLAKDVGIRGIFSDWAATVTYYANCMNIR

Samples

Sample ID Description Type Environment
1 2643221544 Pelomonas sp. Root1444 Isolate Unclassified
2 2643221585 Pelomonas sp. Root662 Isolate Unclassified
3 2643221639 Pelomonas sp. Root1217 Isolate Unclassified
4 2643221646 Pelomonas sp. Root1237 Isolate Unclassified
5 2643221656 Pelomonas sp. Root405 Isolate Unclassified
6 2648501241 Vibrio splendidus UCD-SED7 Isolate Rhizosphere
7 2651869818 Vibrio splendidus UCD-SED10 Isolate Rhizosphere
8 2738541337 Pelomonas sp. BT06 Isolate Unclassified
9 2916178963 Pseudoalteromonas rhizosphaerae RA15 Isolate Rhizosphere
10 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
11 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
12 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
13 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
14 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
15 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
16 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
17 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
18 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
19 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
20 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
21 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
22 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
23 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
24 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
25 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
26 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
27 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
28 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
29 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
30 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
31 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
32 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
33 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
34 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
35 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
36 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
37 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
38 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
39 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
40 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
41 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
42 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
43 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
44 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
45 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
47 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
49 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
51 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
52 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
53 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
54 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
55 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
56 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
57 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
58 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
59 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
60 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300027526 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes) (version 2) Metagenome Rhizosphere
75 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
76 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
77 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
80 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
81 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
82 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
83 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
84 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
85 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
86 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
87 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
88 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
89 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
90 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
91 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
92 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
93 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
94 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
95 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
96 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
97 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
98 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
99 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
100 3300038727 Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 Metagenome Unclassified
101 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
102 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
103 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
104 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
105 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
106 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
107 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
108 3300041501 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_7 MetaG Metagenome Unclassified
109 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
110 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
111 3300042120 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913L_E14_082316_2192 Metagenome Rhizosphere
112 3300042130 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030L_E14_070516_97 Metagenome Rhizosphere
113 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
114 3300042144 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624F_E14_070516_89 Metagenome Rhizosphere
115 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
116 3300042532 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126L_E14_070516_92 Metagenome Rhizosphere
117 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
118 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
119 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
120 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
121 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
122 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
123 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
124 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
125 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
126 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
127 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
128 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
129 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
130 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
131 3300049523 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control Metagenome Rhizosphere
132 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
134 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
140 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
141 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
142 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
143 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
144 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
145 3300049651 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F3_A_0_drought Metagenome Rhizosphere
146 3300049658 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F3_B_0_drought Metagenome Rhizosphere
147 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
148 3300049670 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought Metagenome Rhizosphere
149 3300049683 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_B_3_control Metagenome Rhizosphere
150 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
151 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
152 3300049757 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_B_2_control Metagenome Rhizosphere
153 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
154 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
156 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
157 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
158 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
159 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
160 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
161 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
162 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
163 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
164 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
165 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
166 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
167 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
168 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
169 639633007 Azoarcus olearius BH72 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 95.85
Metatranscriptomes 0
Isolates 4.15

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.39
Nodule 0
Rhizoplane 1.66
Rhizosphere 79.67
Stem 0
Stem Tuber 0
Unclassified 13.28

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10008323 3300003203 Bacteria 4704
2 rootH1_10000268 3300003316 Bacteria 19841
3 rootH2_10114818 3300003320 Bacteria 12499
4 rootL2_10024122 3300003322 Bacteria 19950
5 rootH1_10053544 3300003323 Bacteria 41341
6 rootH1_10239640 3300003323 Bacteria 3025
7 Ga0055531_10012396 3300003794 Bacteria 4015
8 Ga0065707_10125558 3300005295 Bacteria 2021
9 Ga0070683_100105482 3300005329 Bacteria 2657
10 Ga0070680_100028745 3300005336 Bacteria 4461
11 Ga0070682_100040739 3300005337 Bacteria 2859
12 Ga0070689_100002846 3300005340 Bacteria 11376
13 Ga0070689_100093279 3300005340 Bacteria 2376
14 Ga0070669_100214964 3300005353 Bacteria 1518
15 Ga0070700_100007371 3300005441 Bacteria 5934
16 Ga0070694_100031113 3300005444 Bacteria 3497
17 Ga0068867_100000361 3300005459 Bacteria 30295
18 Ga0068867_100064752 3300005459 Bacteria 2718
19 Ga0070706_100042669 3300005467 Bacteria 4191
20 Ga0070706_100263454 3300005467 Bacteria 1609
21 Ga0070697_100004166 3300005536 Bacteria 11077
22 Ga0070672_100102713 3300005543 Bacteria 2321
23 Ga0070686_100163971 3300005544 Bacteria 1567
24 Ga0070665_100029844 3300005548 Bacteria 5487
25 Ga0070704_100109368 3300005549 Bacteria 2100
26 Ga0068859_100082291 3300005617 Bacteria 3262
27 Ga0068859_100112258 3300005617 Bacteria 2789
28 Ga0068861_100000432 3300005719 Bacteria 24368
29 Ga0068861_100061472 3300005719 Bacteria 2883
30 Ga0068860_100001815 3300005843 Bacteria 22723
31 Ga0068862_100006183 3300005844 Bacteria 9970
32 Ga0081538_10051600 3300005981 Unclassified 2467
33 Ga0081540_1041580 3300005983 Unclassified 2381
34 Ga0081539_10000566 3300005985 Bacteria 76491
35 Ga0075368_10005653 3300006042 Bacteria 4317
36 Ga0075366_10007637 3300006195 Bacteria 5984
37 Ga0075366_10181885 3300006195 Bacteria 1277
38 Ga0075370_10007834 3300006353 Bacteria 5463
39 Ga0075428_100054684 3300006844 Bacteria 4374
40 Ga0075428_100064042 3300006844 Unclassified 4026
41 Ga0075428_100086835 3300006844 Bacteria 3412
42 Ga0075428_100109818 3300006844 Bacteria 3004
43 Ga0075430_100226822 3300006846 Unclassified 1549
44 Ga0075431_100169599 3300006847 Bacteria 2243
45 Ga0075429_100097255 3300006880 Unclassified 2568
46 Ga0097620_100082291 3300006931 Bacteria 3262
47 Ga0097620_100112259 3300006931 Bacteria 2789
48 Ga0075435_100021710 3300007076 Bacteria 4943
49 Ga0075435_100105961 3300007076 Bacteria 2334
50 Ga0111539_10019906 3300009094 Bacteria 8266
51 Ga0111539_10026474 3300009094 Bacteria 7090
52 Ga0111539_10045635 3300009094 Bacteria 5245
53 Ga0111539_10060749 3300009094 Bacteria 4478
54 Ga0111539_10068830 3300009094 Bacteria 4179
55 Ga0111539_10161132 3300009094 Unclassified 2623
56 Ga0111539_10228401 3300009094 Bacteria 2167
57 Ga0105247_10094924 3300009101 Bacteria 1898
58 Ga0114129_10006720 3300009147 Bacteria 16329
59 Ga0114129_10019367 3300009147 Bacteria 9692
60 Ga0114129_10020087 3300009147 Bacteria 9508
61 Ga0114129_10067355 3300009147 Bacteria 4994
62 Ga0105243_10014349 3300009148 Bacteria 5997
63 Ga0105243_10038859 3300009148 Bacteria 3708
64 Ga0105248_10018259 3300009177 Bacteria 7745
65 Ga0157370_10009412 3300013104 Bacteria 10442
66 Ga0163162_10016522 3300013306 Bacteria 7211
67 Ga0163163_10125172 3300014325 Bacteria 2608
68 Ga0157380_10000144 3300014326 Bacteria 40378
69 Ga0157380_10000296 3300014326 Bacteria 29958
70 Ga0157380_10016730 3300014326 Bacteria 5416
71 Ga0157380_10102176 3300014326 Bacteria 2390
72 Ga0157379_10027668 3300014968 Bacteria 5048
73 Ga0157379_10157307 3300014968 Bacteria 2050
74 Ga0163161_10072219 3300017792 Bacteria 2527
75 Ga0209050_1001846 3300025298 Bacteria 20514
76 Ga0209051_1001775 3300025303 Bacteria 17122
77 Ga0209051_1004874 3300025303 Bacteria 8053
78 Ga0209051_1008779 3300025303 Bacteria 5303
79 Ga0209257_1000016 3300025304 Bacteria 908015
80 Ga0207688_10027972 3300025901 Bacteria 3102
81 Ga0207645_10037510 3300025907 Bacteria 3109
82 Ga0207681_10011231 3300025923 Bacteria 5501
83 Ga0207664_10107787 3300025929 Bacteria 2312
84 Ga0207709_10019439 3300025935 Bacteria 3820
85 Ga0207709_10069987 3300025935 Bacteria 2223
86 Ga0207709_10163151 3300025935 Bacteria 1556
87 Ga0207704_10014637 3300025938 Bacteria 3968
88 Ga0207691_10046898 3300025940 Bacteria 3968
89 Ga0207691_10227911 3300025940 Bacteria 1614
90 Ga0207689_10039551 3300025942 Bacteria 3904
91 Ga0207689_10112654 3300025942 Bacteria 2236
92 Ga0207708_10001153 3300026075 Bacteria 19884
93 Ga0207641_10161636 3300026088 Bacteria 2037
94 Ga0207648_10000393 3300026089 Bacteria 48485
95 Ga0207648_10014904 3300026089 Bacteria 7165
96 Ga0207648_10153623 3300026089 Bacteria 2032
97 Ga0207674_10235472 3300026116 Bacteria 1778
98 Ga0207675_100001788 3300026118 Bacteria 21504
99 Ga0207675_100002103 3300026118 Bacteria 19743
100 Ga0207675_100089271 3300026118 Bacteria 2896
101 Ga0209968_1005235 3300027526 Bacteria 1949
102 Ga0209966_1000078 3300027695 Bacteria 42139
103 Ga0209966_1003217 3300027695 Bacteria 2745
104 Ga0207428_10186030 3300027907 Unclassified 1567
105 Ga0268266_10022934 3300028379 Bacteria 5312
106 Ga0268266_10064939 3300028379 Bacteria 3154
107 Ga0268266_10172629 3300028379 Bacteria 1963
108 Ga0268265_10008678 3300028380 Bacteria 6870
109 Ga0268265_10111164 3300028380 Bacteria 2237
110 Ga0268265_10283745 3300028380 Eukaryota 1483
111 Ga0307515_10000020 3300028794 Bacteria 411735
112 Ga0307515_10008659 3300028794 Bacteria 19798
113 Ga0307515_10022736 3300028794 Bacteria 11034
114 Ga0307515_10199228 3300028794 Bacteria 1884
115 Ga0265324_10000051 3300029957 Bacteria 99063
116 Ga0307513_10005380 3300031456 Bacteria 16936
117 Ga0307513_10010857 3300031456 Bacteria 11376
118 Ga0307513_10036231 3300031456 Bacteria 5509
119 Ga0307513_10129066 3300031456 Bacteria 2477
120 Ga0307408_100000006 3300031548 Bacteria 472824
121 Ga0307408_100079301 3300031548 Bacteria 2450
122 Ga0316578_10067258 3300031728 Bacteria 2118
123 Ga0307413_10174909 3300031824 Bacteria 1524
124 Ga0307412_10137116 3300031911 Bacteria 1787
125 Ga0307411_10007061 3300032005 Bacteria 5682
126 Ga0307415_100023350 3300032126 Bacteria 3837
127 Ga0316585_10035323 3300032137 Bacteria 1583
128 Ga0373940_0014294 3300035088 Bacteria 1934
129 Ga0373939_0000034 3300035114 Bacteria 49433
130 Ga0373960_0000052 3300035121 Bacteria 15974
131 Ga0373962_0027391 3300035242 Bacteria 1541
132 Ga0373931_0000367 3300035691 Bacteria 18614
133 Ga0373937_0125729 3300036401 Bacteria 2392
134 Ga0316584_0162621 3300036712 Bacteria 1658
135 Ga0395900_0451880 3300037418 Bacteria 1241
136 Ga0395905_0057800 3300037471 Bacteria 3628
137 Ga0400484_04859 3300038725 Bacteria 3646
138 Ga0400490_15555 3300038726 Bacteria 5695
139 Ga0400490_35564 3300038726 Bacteria 3005
140 Ga0400491_01197 3300038727 Bacteria 5563
141 Ga0400486_18994 3300038742 Bacteria 4562
142 Ga0400483_074025 3300039062 Bacteria 35951
143 Ga0400483_215497 3300039062 Bacteria 3440
144 Ga0400489_18105 3300039093 Bacteria 26818
145 Ga0451789_0728240 3300041443 Bacteria 4173
146 Ga0451800_0280950 3300041459 Bacteria 2249
147 Ga0451807_0382418 3300041486 Bacteria 5505
148 Ga0451841_0677324 3300041498 Bacteria 1732
149 Ga0451845_0269242 3300041501 Bacteria 1717
150 Ga0451853_1137830 3300041512 Bacteria 18958
151 Ga0439449_0059979 3300042007 Bacteria 1404
152 Ga0450917_000008 3300042120 Bacteria 8493
153 Ga0450892_000413 3300042130 Bacteria 5070
154 Ga0450903_005958 3300042138 Bacteria 2034
155 Ga0450889_000669 3300042144 Bacteria 3754
156 Ga0439435_0024537 3300042436 Bacteria 1591
157 Ga0450893_0003160 3300042532 Bacteria 2587
158 Ga0451577_0002644 3300042876 Bacteria 20995
159 Ga0451577_0025671 3300042876 Bacteria 5344
160 Ga0451577_0270043 3300042876 Bacteria 1540
161 Ga0453683_0036535 3300044673 Bacteria 3092
162 Ga0453684_0098337 3300044712 Bacteria 3588
163 Ga0451576_0007873 3300045051 Bacteria 12631
164 Ga0451576_0010479 3300045051 Bacteria 10627
165 Ga0451576_0025344 3300045051 Bacteria 6390
166 Ga0495638_0000808 3300046460 Bacteria 33041
167 Ga0495638_0032812 3300046460 Bacteria 3324
168 Ga0495616_0091497 3300046513 Bacteria 1439
169 Ga0495621_0025404 3300046539 Bacteria 1990
170 Ga0495625_0003352 3300046660 Bacteria 16114
171 Ga0495625_0012746 3300046660 Bacteria 6800
172 Ga0495659_0013285 3300046664 Bacteria 2681
173 Ga0495669_0012088 3300046684 Bacteria 3669
174 Ga0495686_0022381 3300047472 Bacteria 4183
175 Ga0496114_0001835 3300048917 Bacteria 16094
176 Ga0496124_0008348 3300048927 Bacteria 10845
177 Ga0501298_011877 3300049521 Bacteria 1520
178 Ga0501300_001683 3300049523 Bacteria 3315
179 Ga0501032_0185846 3300049569 Bacteria 1359
180 Ga0501033_0000338 3300049570 Bacteria 44832
181 Ga0501038_0005021 3300049574 Bacteria 12286
182 Ga0501040_0070629 3300049576 Bacteria 2410
183 Ga0501042_0006019 3300049578 Bacteria 7854
184 Ga0501047_0040468 3300049581 Bacteria 4508
185 Ga0501048_0059322 3300049582 Bacteria 2712
186 Ga0501071_0307810 3300049587 Bacteria 1202
187 Ga0501072_0001485 3300049588 Bacteria 17560
188 Ga0501074_0109911 3300049590 Bacteria 1972
189 Ga0501075_0005662 3300049591 Bacteria 8551
190 Ga0501075_0013373 3300049591 Bacteria 5857
191 Ga0501075_0294967 3300049591 Bacteria 1235
192 Ga0501076_0000836 3300049592 Bacteria 20010
193 Ga0501077_0001467 3300049593 Bacteria 14189
194 Ga0501077_0012525 3300049593 Bacteria 5310
195 Ga0501201_005273 3300049651 Bacteria 1207
196 Ga0501211_002733 3300049658 Bacteria 1851
197 Ga0501217_007342 3300049661 Bacteria 2360
198 Ga0501236_005053 3300049670 Bacteria 1587
199 Ga0501253_000975 3300049683 Bacteria 2746
200 Ga0501081_0035077 3300049743 Bacteria 3415
201 Ga0501083_0085598 3300049744 Bacteria 2085
202 Ga0501232_001745 3300049757 Bacteria 1784
203 Ga0501035_0001110 3300049822 Bacteria 28205
204 Ga0501035_0008184 3300049822 Bacteria 9744
205 Ga0501044_0000111 3300049823 Bacteria 100080
206 Ga0501044_0027844 3300049823 Bacteria 5966
207 Ga0501045_0001028 3300049824 Bacteria 18350
208 Ga0501045_0104008 3300049824 Bacteria 2103
209 Ga0501045_0140504 3300049824 Bacteria 1796
210 nmdc:mga06z11_30198_c1 3300050494 Bacteria 2620
211 nmdc:mga07m45_1757_c1 3300050496 Bacteria 9985
212 nmdc:mga05p37_45350_c1 3300050507 Bacteria 5408
213 nmdc:mga05p37_7659_c1 3300050507 Bacteria 11878
214 nmdc:mga09592_50768_c1 3300050508 Bacteria 3498
215 nmdc:mga0qj67_63256_c1 3300050509 Unclassified 2942
216 nmdc:mga08y16_117896_c1 3300050511 Unclassified 2763
217 nmdc:mga08y16_125578_c1 3300050511 Unclassified 2669
218 nmdc:mga08y16_28290_c1 3300050511 Bacteria 5908
219 nmdc:mga08y16_300637_c1 3300050511 Bacteria 1654
220 nmdc:mga08y16_49330_c1 3300050511 Unclassified 4406
221 nmdc:mga08y16_64529_c1 3300050511 Bacteria 3824
222 nmdc:mga08y16_7992_c1 3300050511 Bacteria 11068
223 nmdc:mga0n895_294537_c1 3300050512 Bacteria 1645
224 nmdc:mga0rr50_58427_c1 3300050513 Bacteria 2890
225 nmdc:mga08x19_42925_c1 3300050514 Bacteria 2884
226 nmdc:mga0a205_220870_c1 3300050515 Bacteria 1780
227 nmdc:mga0a205_34232_c1 3300050515 Bacteria 4874
228 Ga0500578_0001321 3300053086 Eukaryota 25502
229 Ga0590071_009586 3300059421 Bacteria 2274
230 Ga0530510_0001037 3300061734 Bacteria 18387
231 Ga0530510_0076819 3300061734 Bacteria 2427

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300045051 Ga0451576_0010479 Ga0451576_0010479_592_1617 328
2 3300006195 Ga0075366_10181885 Ga0075366_101818852 355
3 3300037418 Ga0395900_0451880 Ga0395900_0451880_113_1219 359
4 3300028380 Ga0268265_10008678 Ga0268265_100086786 361
5 3300049744 Ga0501083_0085598 Ga0501083_0085598_44_1144 363
6 3300042876 Ga0451577_0270043 Ga0451577_0270043_77_1189 364
7 3300049587 Ga0501071_0307810 Ga0501071_0307810_13_1128 364
8 3300049591 Ga0501075_0294967 Ga0501075_0294967_108_1223 364
9 3300036401 Ga0373937_0125729 Ga0373937_0125729_137_1276 368
10 3300049661 Ga0501217_007342 Ga0501217_007342_1008_2159 369
11 3300009147 Ga0114129_10019367 Ga0114129_100193673 371
12 3300009147 Ga0114129_10006720 Ga0114129_100067204 372
13 3300050507 nmdc:mga05p37_7659_c1 nmdc:mga05p37_7659_c1_3192_4319 372
14 3300050515 nmdc:mga0a205_34232_c1 nmdc:mga0a205_34232_c1_1345_2478 374
15 3300049651 Ga0501201_005273 Ga0501201_005273_40_1197 377
16 3300046664 Ga0495659_0013285 Ga0495659_0013285_1200_2423 378
17 3300046684 Ga0495669_0012088 Ga0495669_0012088_47_1270 378
18 3300006844 Ga0075428_100086835 Ga0075428_1000868352 385
19 3300006847 Ga0075431_100169599 Ga0075431_1001695992 385
20 3300049569 Ga0501032_0185846 Ga0501032_0185846_28_1206 385
21 3300026116 Ga0207674_10235472 Ga0207674_102354722 387
22 3300005340 Ga0070689_100002846 Ga0070689_1000028462 388
23 3300025901 Ga0207688_10027972 Ga0207688_100279723 388
24 3300028379 Ga0268266_10022934 Ga0268266_100229343 388
25 3300003323 rootH1_10239640 rootH1_102396402 389
26 3300007076 Ga0075435_100105961 Ga0075435_1001059612 389
27 3300028794 Ga0307515_10199228 Ga0307515_101992282 389
28 3300046660 Ga0495625_0012746 Ga0495625_0012746_1328_2590 389
29 3300050513 nmdc:mga0rr50_58427_c1 nmdc:mga0rr50_58427_c1_973_2205 389
30 3300050514 nmdc:mga08x19_42925_c1 nmdc:mga08x19_42925_c1_779_2011 389
31 3300006844 Ga0075428_100054684 Ga0075428_1000546842 390
32 3300006846 Ga0075430_100226822 Ga0075430_1002268222 390
33 3300006880 Ga0075429_100097255 Ga0075429_1000972552 390
34 3300009094 Ga0111539_10026474 Ga0111539_100264743 390
35 3300050508 nmdc:mga09592_50768_c1 nmdc:mga09592_50768_c1_245_1456 390
36 3300050509 nmdc:mga0qj67_63256_c1 nmdc:mga0qj67_63256_c1_585_1796 390
37 3300050511 nmdc:mga08y16_28290_c1 nmdc:mga08y16_28290_c1_4083_5294 390
38 3300031911 Ga0307412_10137116 Ga0307412_101371162 391
39 3300032126 Ga0307415_100023350 Ga0307415_1000233504 391
40 3300005543 Ga0070672_100102713 Ga0070672_1001027132 392
41 3300005544 Ga0070686_100163971 Ga0070686_1001639711 392
42 3300005617 Ga0068859_100112258 Ga0068859_1001122583 392
43 3300005719 Ga0068861_100061472 Ga0068861_1000614723 392
44 3300006931 Ga0097620_100112259 Ga0097620_1001122593 392
45 3300025940 Ga0207691_10227911 Ga0207691_102279112 392
46 3300025942 Ga0207689_10112654 Ga0207689_101126543 392
47 3300026118 Ga0207675_100089271 Ga0207675_1000892713 392
48 3300028379 Ga0268266_10064939 Ga0268266_100649393 392
49 3300031456 Ga0307513_10036231 Ga0307513_100362312 392
50 3300032137 Ga0316585_10035323 Ga0316585_100353232 392
51 3300038726 Ga0400490_35564 Ga0400490_35564_1294_2613 392
52 3300005336 Ga0070680_100028745 Ga0070680_1000287453 393
53 3300042007 Ga0439449_0059979 Ga0439449_0059979_153_1391 393
54 3300046460 Ga0495638_0032812 Ga0495638_0032812_1939_3195 393
55 3300038725 Ga0400484_04859 Ga0400484_04859_33_1352 394
56 3300041443 Ga0451789_0728240 Ga0451789_0728240_340_1587 394
57 3300041459 Ga0451800_0280950 Ga0451800_0280950_24_1271 394
58 3300041486 Ga0451807_0382418 Ga0451807_0382418_2645_3892 394
59 iso_pu_bacteria 2648501241 2649119591 394
60 iso_pu_bacteria 2651869818 2652973758 394
61 3300005353 Ga0070669_100214964 Ga0070669_1002149642 395
62 3300014326 Ga0157380_10016730 Ga0157380_100167305 395
63 3300039062 Ga0400483_215497 Ga0400483_215497_1086_2441 395
64 3300046539 Ga0495621_0025404 Ga0495621_0025404_398_1744 395
65 3300005467 Ga0070706_100042669 Ga0070706_1000426692 396
66 3300005536 Ga0070697_100004166 Ga0070697_10000416610 396
67 3300031456 Ga0307513_10005380 Ga0307513_100053804 396
68 3300047472 Ga0495686_0022381 Ga0495686_0022381_1159_2430 396
69 3300048927 Ga0496124_0008348 Ga0496124_0008348_352_1668 396
70 3300005329 Ga0070683_100105482 Ga0070683_1001054821 397
71 3300005444 Ga0070694_100031113 Ga0070694_1000311132 397
72 3300005459 Ga0068867_100000361 Ga0068867_1000003614 397
73 3300005617 Ga0068859_100082291 Ga0068859_1000822913 397
74 3300005719 Ga0068861_100000432 Ga0068861_1000004323 397
75 3300005843 Ga0068860_100001815 Ga0068860_1000018154 397
76 3300006042 Ga0075368_10005653 Ga0075368_100056533 397
77 3300006931 Ga0097620_100082291 Ga0097620_1000822913 397
78 3300009148 Ga0105243_10014349 Ga0105243_100143496 397
79 3300013306 Ga0163162_10016522 Ga0163162_1001652210 397
80 3300014326 Ga0157380_10102176 Ga0157380_101021763 397
81 3300014968 Ga0157379_10027668 Ga0157379_100276683 397
82 3300017792 Ga0163161_10072219 Ga0163161_100722192 397
83 3300025923 Ga0207681_10011231 Ga0207681_100112313 397
84 3300025935 Ga0207709_10019439 Ga0207709_100194393 397
85 3300025938 Ga0207704_10014637 Ga0207704_100146372 397
86 3300025940 Ga0207691_10046898 Ga0207691_100468983 397
87 3300026088 Ga0207641_10161636 Ga0207641_101616361 397
88 3300026089 Ga0207648_10000393 Ga0207648_1000039329 397
89 3300026118 Ga0207675_100001788 Ga0207675_1000017885 397
90 3300046513 Ga0495616_0091497 Ga0495616_0091497_101_1363 397
91 3300005337 Ga0070682_100040739 Ga0070682_1000407392 398
92 3300009094 Ga0111539_10060749 Ga0111539_100607493 398
93 3300027907 Ga0207428_10186030 Ga0207428_101860302 398
94 3300031456 Ga0307513_10010857 Ga0307513_100108571 398
95 3300031456 Ga0307513_10129066 Ga0307513_101290663 398
96 3300049822 Ga0501035_0001110 Ga0501035_0001110_18144_19409 399
97 3300014326 Ga0157380_10000144 Ga0157380_1000014443 400
98 iso_pu_bacteria 2916178963 2916180304 400
99 3300005340 Ga0070689_100093279 Ga0070689_1000932792 401
100 3300005441 Ga0070700_100007371 Ga0070700_1000073711 401
101 3300005844 Ga0068862_100006183 Ga0068862_10000618311 401
102 3300007076 Ga0075435_100021710 Ga0075435_1000217104 401
103 3300009148 Ga0105243_10038859 Ga0105243_100388592 401
104 3300025935 Ga0207709_10163151 Ga0207709_101631512 401
105 3300025942 Ga0207689_10039551 Ga0207689_100395513 401
106 3300026075 Ga0207708_10001153 Ga0207708_1000115314 401
107 3300026089 Ga0207648_10153623 Ga0207648_101536232 401
108 3300026118 Ga0207675_100002103 Ga0207675_1000021035 401
109 3300027695 Ga0209966_1003217 Ga0209966_10032172 401
110 3300028380 Ga0268265_10111164 Ga0268265_101111642 401
111 3300049582 Ga0501048_0059322 Ga0501048_0059322_991_2217 401
112 3300049591 Ga0501075_0013373 Ga0501075_0013373_1064_2290 401
113 3300049743 Ga0501081_0035077 Ga0501081_0035077_87_1313 401
114 3300049824 Ga0501045_0140504 Ga0501045_0140504_40_1266 401
115 3300014326 Ga0157380_10000296 Ga0157380_1000029627 402
116 3300025929 Ga0207664_10107787 Ga0207664_101077871 402
117 3300050511 nmdc:mga08y16_117896_c1 nmdc:mga08y16_117896_c1_1226_2494 402
118 iso_pu_bacteria 2738541337 2739053563 402
119 3300009094 Ga0111539_10161132 Ga0111539_101611321 403
120 3300050511 nmdc:mga08y16_125578_c1 nmdc:mga08y16_125578_c1_1341_2579 403
121 3300041498 Ga0451841_0677324 Ga0451841_0677324_309_1631 404
122 3300041501 Ga0451845_0269242 Ga0451845_0269242_321_1643 404
123 3300041512 Ga0451853_1137830 Ga0451853_1137830_10161_11483 404
124 3300045051 Ga0451576_0025344 Ga0451576_0025344_1183_2418 404
125 3300049570 Ga0501033_0000338 Ga0501033_0000338_35260_36729 404
126 3300049581 Ga0501047_0040468 Ga0501047_0040468_1618_3087 404
127 3300049823 Ga0501044_0027844 Ga0501044_0027844_1587_3056 404
128 3300053086 Ga0500578_0001321 Ga0500578_0001321_5137_6405 404
129 iso_pu_bacteria 2643221639 2644220380 404
130 iso_pu_bacteria 2643221646 2644259307 404
131 3300005548 Ga0070665_100029844 Ga0070665_1000298443 405
132 3300031548 Ga0307408_100079301 Ga0307408_1000793012 405
133 3300031824 Ga0307413_10174909 Ga0307413_101749091 405
134 3300046460 Ga0495638_0000808 Ga0495638_0000808_14392_15714 405
135 3300046660 Ga0495625_0003352 Ga0495625_0003352_11906_13228 405
136 3300003320 rootH2_10114818 rootH2_101148183 406
137 3300003323 rootH1_10053544 rootH1_1005354414 406
138 3300009147 Ga0114129_10067355 Ga0114129_100673552 406
139 3300028380 Ga0268265_10283745 Ga0268265_102837451 406
140 3300036712 Ga0316584_0162621 Ga0316584_0162621_208_1479 406
141 3300037471 Ga0395905_0057800 Ga0395905_0057800_476_1723 406
142 3300042876 Ga0451577_0002644 Ga0451577_0002644_17558_18799 406
143 3300044673 Ga0453683_0036535 Ga0453683_0036535_1629_2870 406
144 3300045051 Ga0451576_0007873 Ga0451576_0007873_2490_3731 406
145 3300049590 Ga0501074_0109911 Ga0501074_0109911_714_1961 406
146 3300050507 nmdc:mga05p37_45350_c1 nmdc:mga05p37_45350_c1_1683_2927 406
147 iso_pu_bacteria 2643221544 2643741745 406
148 3300003316 rootH1_10000268 rootH1_1000026820 407
149 3300003322 rootL2_10024122 rootL2_100241224 407
150 3300028794 Ga0307515_10000020 Ga0307515_10000020215 407
151 3300059421 Ga0590071_009586 Ga0590071_009586_802_2130 407
152 iso_pu_bacteria 2643221585 2643935003 407
153 iso_pu_bacteria 2643221656 2644316490 407
154 3300005459 Ga0068867_100064752 Ga0068867_1000647522 408
155 3300006195 Ga0075366_10007637 Ga0075366_100076372 408
156 3300009147 Ga0114129_10020087 Ga0114129_100200874 408
157 3300025907 Ga0207645_10037510 Ga0207645_100375102 408
158 3300026089 Ga0207648_10014904 Ga0207648_100149045 408
159 3300029957 Ga0265324_10000051 Ga0265324_1000005142 408
160 3300031548 Ga0307408_100000006 Ga0307408_100000006224 408
161 3300035088 Ga0373940_0014294 Ga0373940_0014294_409_1674 408
162 3300035114 Ga0373939_0000034 Ga0373939_0000034_11011_12276 408
163 3300035121 Ga0373960_0000052 Ga0373960_0000052_371_1636 408
164 3300035242 Ga0373962_0027391 Ga0373962_0027391_10_1275 408
165 3300035691 Ga0373931_0000367 Ga0373931_0000367_10282_11547 408
166 3300042436 Ga0439435_0024537 Ga0439435_0024537_310_1554 408
167 3300050494 nmdc:mga06z11_30198_c1 nmdc:mga06z11_30198_c1_549_1799 408
168 3300003794 Ga0055531_10012396 Ga0055531_100123961 409
169 3300005981 Ga0081538_10051600 Ga0081538_100516002 409
170 3300005983 Ga0081540_1041580 Ga0081540_10415802 409
171 3300025298 Ga0209050_1001846 Ga0209050_10018461 409
172 3300025303 Ga0209051_1008779 Ga0209051_10087792 409
173 3300025304 Ga0209257_1000016 Ga0209257_1000016472 409
174 3300032005 Ga0307411_10007061 Ga0307411_100070613 409
175 3300005549 Ga0070704_100109368 Ga0070704_1001093681 410
176 3300009094 Ga0111539_10228401 Ga0111539_102284012 410
177 3300025303 Ga0209051_1001775 Ga0209051_100177511 410
178 3300025303 Ga0209051_1004874 Ga0209051_10048743 410
179 3300025935 Ga0207709_10069987 Ga0207709_100699871 410
180 3300028794 Ga0307515_10008659 Ga0307515_1000865911 410
181 3300028794 Ga0307515_10022736 Ga0307515_100227367 410
182 3300049576 Ga0501040_0070629 Ga0501040_0070629_705_1961 410
183 3300050511 nmdc:mga08y16_64529_c1 nmdc:mga08y16_64529_c1_682_2025 410
184 3300006353 Ga0075370_10007834 Ga0075370_100078342 411
185 3300009094 Ga0111539_10019906 Ga0111539_100199066 411
186 3300027526 Ga0209968_1005235 Ga0209968_10052351 411
187 3300027695 Ga0209966_1000078 Ga0209966_100007836 411
188 3300042120 Ga0450917_000008 Ga0450917_000008_1182_2462 411
189 3300042130 Ga0450892_000413 Ga0450892_000413_711_1991 411
190 3300042138 Ga0450903_005958 Ga0450903_005958_262_1542 411
191 3300042144 Ga0450889_000669 Ga0450889_000669_1188_2468 411
192 3300042532 Ga0450893_0003160 Ga0450893_0003160_347_1627 411
193 3300049521 Ga0501298_011877 Ga0501298_011877_206_1486 411
194 3300049523 Ga0501300_001683 Ga0501300_001683_1335_2615 411
195 3300049658 Ga0501211_002733 Ga0501211_002733_413_1693 411
196 3300049670 Ga0501236_005053 Ga0501236_005053_267_1547 411
197 3300049683 Ga0501253_000975 Ga0501253_000975_173_1453 411
198 3300049757 Ga0501232_001745 Ga0501232_001745_139_1419 411
199 3300050496 nmdc:mga07m45_1757_c1 nmdc:mga07m45_1757_c1_5813_7096 411
200 3300050511 nmdc:mga08y16_7992_c1 nmdc:mga08y16_7992_c1_8166_9431 411
201 3300049593 Ga0501077_0012525 Ga0501077_0012525_2974_4230 412
202 3300009094 Ga0111539_10045635 Ga0111539_100456355 413
203 3300013104 Ga0157370_10009412 Ga0157370_100094128 413
204 3300049824 Ga0501045_0104008 Ga0501045_0104008_713_1987 413
205 3300050511 nmdc:mga08y16_300637_c1 nmdc:mga08y16_300637_c1_367_1626 413
206 3300061734 Ga0530510_0076819 Ga0530510_0076819_144_1418 413
207 3300005295 Ga0065707_10125558 Ga0065707_101255581 414
208 3300049578 Ga0501042_0006019 Ga0501042_0006019_6553_7827 414
209 3300049588 Ga0501072_0001485 Ga0501072_0001485_9875_11149 414
210 3300049591 Ga0501075_0005662 Ga0501075_0005662_6614_7888 414
211 3300049592 Ga0501076_0000836 Ga0501076_0000836_12093_13367 414
212 3300049593 Ga0501077_0001467 Ga0501077_0001467_11271_12545 414
213 3300049824 Ga0501045_0001028 Ga0501045_0001028_10466_11740 414
214 3300061734 Ga0530510_0001037 Ga0530510_0001037_6648_7922 414
215 iso_pu_bacteria 639633007 639788007 414
216 3300006844 Ga0075428_100109818 Ga0075428_1001098181 415
217 3300038726 Ga0400490_15555 Ga0400490_15555_4310_5629 415
218 3300038727 Ga0400491_01197 Ga0400491_01197_941_2260 415
219 3300038742 Ga0400486_18994 Ga0400486_18994_3010_4329 415
220 3300039062 Ga0400483_074025 Ga0400483_074025_31399_32718 415
221 3300039093 Ga0400489_18105 Ga0400489_18105_15182_16501 415
222 3300048917 Ga0496114_0001835 Ga0496114_0001835_3712_5037 416
223 3300009101 Ga0105247_10094924 Ga0105247_100949241 417
224 3300009177 Ga0105248_10018259 Ga0105248_100182596 417
225 3300014325 Ga0163163_10125172 Ga0163163_101251723 417
226 3300014968 Ga0157379_10157307 Ga0157379_101573072 417
227 3300028379 Ga0268266_10172629 Ga0268266_101726291 417
228 3300042876 Ga0451577_0025671 Ga0451577_0025671_197_1537 418
229 3300044712 Ga0453684_0098337 Ga0453684_0098337_862_2202 418
230 3300050512 nmdc:mga0n895_294537_c1 nmdc:mga0n895_294537_c1_12_1271 418
231 3300050515 nmdc:mga0a205_220870_c1 nmdc:mga0a205_220870_c1_71_1330 418
232 3300031728 Ga0316578_10067258 Ga0316578_100672582 419
233 3300049574 Ga0501038_0005021 Ga0501038_0005021_10427_11743 424
234 3300049822 Ga0501035_0008184 Ga0501035_0008184_7540_8856 424
235 3300049823 Ga0501044_0000111 Ga0501044_0000111_44998_46314 424
236 3300005467 Ga0070706_100263454 Ga0070706_1002634541 425
237 3300006844 Ga0075428_100064042 Ga0075428_1000640422 426
238 3300009094 Ga0111539_10068830 Ga0111539_100688303 426
239 3300050511 nmdc:mga08y16_49330_c1 nmdc:mga08y16_49330_c1_1017_2330 426
240 3300003203 JGI25406J46586_10008323 JGI25406J46586_100083233 435
241 3300005985 Ga0081539_10000566 Ga0081539_1000056640 435

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03009

GDPD

Glycerophosphoryl diester phosphodiesterase family

114

453

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
5t91-assembly1.cif.gz_A crystal structure of b. subtilis 168 glpq in complex with bicine 0.8529 81 430
5t9b-assembly1.cif.gz_G crystal structure of b. subtilis 168 glpq in complex with glycerol-3-phosphate (5 minute soak) 0.852 81 430
2pz0-assembly1.cif.gz_A crystal structure of glycerophosphodiester phosphodiesterase (gdpd) from t. tengcongensis 0.8418 83 432
3ks5-assembly1.cif.gz_A crystal structure of putative glycerophosphoryl diester phosphodiesterase (17743486) from agrobacterium tumefaciens str. c58 (dupont) at 2.05 a resolution 0.8233 82 433
2pz0-assembly1.cif.gz_A crystal structure of glycerophosphodiester phosphodiesterase (gdpd) from t. tengcongensis 0.8222 83 432
ID Description Score Start End Superfamily
2pz0B00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Phosphatidylinositol (PI) phosphodiesterase 0.8396 83 433 3.20.20.190
af_Q2FXK4_2_247_3.20.20.190 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Phosphatidylinositol (PI) phosphodiesterase 0.8228 72 420 3.20.20.190
2pz0B00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Phosphatidylinositol (PI) phosphodiesterase 0.8148 83 433 3.20.20.190
af_A0A0P0XM87_357_553_3.20.20.190 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Phosphatidylinositol (PI) phosphodiesterase 0.814 81 242 3.20.20.190
1v8eA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Phosphatidylinositol (PI) phosphodiesterase 0.8095 83 425 3.20.20.190
ID Description Score Start End GO Terms
AF-A0A522AT36-F1-model_v4 Glycerophosphodiester phosphodiesterase 0.9617 272 435 GO:0006629
GO:0008081
AF-A0A6G0WBW7-F1-model_v4 glycerophosphodiester phosphodiesterase (EC 3.1.4.46) 0.9615 45 433 GO:0006071
GO:0006629
GO:0008889
AF-A0A2E9L278-F1-model_v4 glycerophosphodiester phosphodiesterase (EC 3.1.4.46) 0.961 45 435 GO:0006071
GO:0006629
GO:0008889
AF-B8EQ53-F1-model_v4 glycerophosphodiester phosphodiesterase (EC 3.1.4.46) 0.9607 45 435 GO:0006071
GO:0006629
GO:0008889
AF-A0A369H2I7-F1-model_v4 chitinase (EC 3.2.1.14) 0.9596 45 434 GO:0005576
GO:0005975
GO:0006032
GO:0006629
GO:0008061
GO:0008081
GO:0008843

Feature Viewer

pLDDT pTM Quality
89.37 0.86 High
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Predicted Structure (AlphaFold2)

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