F354591

General Info

Members Datasets Scaffolds Average Seq Length
242 181 484 358

Family's Representative Sequence

Representative Sequence 3300009093|Ga0105240_10125503|Ga0105240_101255032
Length 404
Sequence VRIRRAATTALPALAATLVLALLAGCGSGSSTVIFKDKTEESTTAAEPEAGSAAEAELPPQVPSELAIETGSPGFNAAEIYREVSPGVVTIRSVFGGAAGGAEGSGFVLDPNGEIVTNAHVVTEEGSNGGRTPAKEVFVEFSNRNVLEAKIVGFDPFADVALLKVEPEGFPLHALELGDDAELEVGEPVAAIGSPFGEQRSLSVGVVSATDRSVKSLTQFQIEGAIQTDASINPGNSGGPLLEGEGKVVGINQQIETSSGANDGVGFAVPTTAIERSVEQLRENGVAEYAYIGVSSQALYPQLAHKLGIDTDFGALIARVVPGGPADKAGLRGADGTIRFQAAEYETGGDVIVEVEGHKVVQPDALIRAVGEKEPGEKLEMTILRDNKRETVDVTLGKRPDQVE

Samples

Sample ID Description Type Environment
1 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
2 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
3 3300002244 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M1 Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
6 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
11 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
12 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
15 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
16 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
17 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
18 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
19 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
20 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
21 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
22 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
23 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
24 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
25 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
26 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
27 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
28 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
29 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
30 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
31 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
32 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
33 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
34 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
35 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
36 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
37 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
38 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
39 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
40 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
41 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
42 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
43 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
44 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
45 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
72 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
73 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
74 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
75 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
76 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
77 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
78 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
79 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
80 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
81 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
82 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
83 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
84 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
85 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
86 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
87 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
88 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
89 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
90 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
91 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
92 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
93 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
94 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
95 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
96 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
97 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
98 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
99 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
100 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
101 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
102 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
103 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
104 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
105 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
106 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
107 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
108 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
109 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
110 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
111 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
112 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
113 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
114 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
115 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
116 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
117 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
118 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
119 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
120 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
121 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
122 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
123 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
124 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
125 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
126 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
127 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
128 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
129 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
130 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
131 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
132 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
133 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
134 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
135 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
136 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
137 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
138 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
139 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
140 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
141 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
142 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
143 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
144 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
145 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
146 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
148 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
149 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
151 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
152 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
153 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
154 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
156 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
157 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
158 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
159 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
160 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
161 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
162 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
163 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
164 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
165 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
166 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
167 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
168 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
169 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
170 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
171 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
172 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
173 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
174 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
175 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
176 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
177 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
178 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
179 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
180 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
181 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.59
Metatranscriptomes 0.41
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.24
Nodule 0
Rhizoplane 9.09
Rhizosphere 85.54
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105240_10125503 3300009093 Bacteria 3085
2 JGI24034J26672_10000335 3300002239 Bacteria 6050
3 JGI24742J22300_10004550 3300002244 Bacteria 2274
4 Ga0070683_100030235 3300005329 Bacteria 4913
5 Ga0070683_100037855 3300005329 Bacteria 4417
6 Ga0070677_10000031 3300005333 Bacteria 41799
7 Ga0070666_10025059 3300005335 Bacteria 3887
8 Ga0068868_100000755 3300005338 Bacteria 21936
9 Ga0070660_100208995 3300005339 Bacteria 1584
10 Ga0070689_100156393 3300005340 Bacteria 1841
11 Ga0070691_10004825 3300005341 Bacteria 6140
12 Ga0070674_100000003 3300005356 Bacteria 258221
13 Ga0070674_100000028 3300005356 Bacteria 69584
14 Ga0070673_100000678 3300005364 Bacteria 18778
15 Ga0070659_100019624 3300005366 Bacteria 5127
16 Ga0070667_100045359 3300005367 Bacteria 3695
17 Ga0070714_100130800 3300005435 Bacteria 2243
18 Ga0070700_100061571 3300005441 Bacteria 2368
19 Ga0070663_100018089 3300005455 Bacteria 4613
20 Ga0070681_10053527 3300005458 Bacteria 4023
21 Ga0068867_100000400 3300005459 Bacteria 29042
22 Ga0070685_10115180 3300005466 Bacteria 1662
23 Ga0070679_100005814 3300005530 Bacteria 11445
24 Ga0070679_100006765 3300005530 Bacteria 10692
25 Ga0070693_100001909 3300005547 Bacteria 9523
26 Ga0068864_100000044 3300005618 Bacteria 157919
27 Ga0068866_10000002 3300005718 Bacteria 394090
28 Ga0068866_10000045 3300005718 Bacteria 48372
29 Ga0068858_100000042 3300005842 Bacteria 132482
30 Ga0068858_100028031 3300005842 Bacteria 5234
31 Ga0068860_100002962 3300005843 Bacteria 17523
32 Ga0081455_10225150 3300005937 Bacteria 1388
33 Ga0081540_1003261 3300005983 Bacteria 12892
34 Ga0075363_100117104 3300006048 Bacteria 1485
35 Ga0075367_10079163 3300006178 Bacteria 1986
36 Ga0075431_100102662 3300006847 Bacteria 2951
37 Ga0075433_10000058 3300006852 Bacteria 48106
38 Ga0075433_10118772 3300006852 Bacteria 2347
39 Ga0105245_10507249 3300009098 Bacteria 1223
40 Ga0105247_10000838 3300009101 Bacteria 23349
41 Ga0105238_10000524 3300009551 Bacteria 40236
42 Ga0105238_10159885 3300009551 Bacteria 2228
43 Ga0105249_10000095 3300009553 Bacteria 121300
44 Ga0105239_10325604 3300010375 Bacteria 1733
45 Ga0157374_10080321 3300013296 Bacteria 3093
46 Ga0157375_10001183 3300013308 Bacteria 22532
47 Ga0163163_10107274 3300014325 Bacteria 2819
48 Ga0157380_10000461 3300014326 Bacteria 24795
49 Ga0157379_10028796 3300014968 Bacteria 4940
50 Ga0157379_10179759 3300014968 Bacteria 1911
51 Ga0163161_10000274 3300017792 Bacteria 45112
52 Ga0206356_11812713 3300020070 Bacteria 2732
53 Ga0207682_10000067 3300025893 Bacteria 45608
54 Ga0207642_10000001 3300025899 Bacteria 714030
55 Ga0207642_10000003 3300025899 Bacteria 650651
56 Ga0207642_10000004 3300025899 Bacteria 407822
57 Ga0207642_10004030 3300025899 Bacteria 4700
58 Ga0207710_10001615 3300025900 Bacteria 11035
59 Ga0207680_10064276 3300025903 Bacteria 2249
60 Ga0207707_10024470 3300025912 Bacteria 5283
61 Ga0207693_10124263 3300025915 Bacteria 2027
62 Ga0207652_10000177 3300025921 Bacteria 67555
63 Ga0207652_10004885 3300025921 Bacteria 10843
64 Ga0207694_10000067 3300025924 Bacteria 128108
65 Ga0207687_10174342 3300025927 Bacteria 1661
66 Ga0207664_10128653 3300025929 Bacteria 2129
67 Ga0207690_10011834 3300025932 Bacteria 5217
68 Ga0207706_10000338 3300025933 Bacteria 50849
69 Ga0207669_10000014 3300025937 Bacteria 129145
70 Ga0207669_10000024 3300025937 Bacteria 96123
71 Ga0207661_10108334 3300025944 Bacteria 2345
72 Ga0207651_10000388 3300025960 Bacteria 18779
73 Ga0207658_10031099 3300025986 Bacteria 3787
74 Ga0207677_10000877 3300026023 Bacteria 17024
75 Ga0207703_10000060 3300026035 Bacteria 134334
76 Ga0207639_10014566 3300026041 Bacteria 5536
77 Ga0207678_10003784 3300026067 Bacteria 13605
78 Ga0207708_10077639 3300026075 Bacteria 2549
79 Ga0207648_10004540 3300026089 Bacteria 14233
80 Ga0207676_10000043 3300026095 Bacteria 161948
81 Ga0207683_10134078 3300026121 Bacteria 2229
82 Ga0268266_10000233 3300028379 Bacteria 95854
83 Ga0268264_10001556 3300028381 Bacteria 21255
84 Ga0265337_1000004 3300028556 Bacteria 106708
85 Ga0265326_10000091 3300028558 Bacteria 47039
86 Ga0265322_10000006 3300028654 Bacteria 231685
87 Ga0265324_10000269 3300029957 Bacteria 38425
88 Ga0265328_10002913 3300031239 Bacteria 7635
89 Ga0265320_10000001 3300031240 Bacteria 847191
90 Ga0265329_10012313 3300031242 Bacteria 3077
91 Ga0265331_10010023 3300031250 Bacteria 5268
92 Ga0265327_10000003 3300031251 Bacteria 852750
93 Ga0265314_10000567 3300031711 Bacteria 47136
94 Ga0307406_10090843 3300031901 Bacteria 2056
95 Ga0307416_100233806 3300032002 Bacteria 1774
96 Ga0373955_0151066 3300035172 Bacteria 1367
97 Ga0373937_0014033 3300036401 Bacteria 7065
98 Ga0466963_0000021 3300044694 Bacteria 53432
99 Ga0466957_0072231 3300044842 Bacteria 2136
100 Ga0466967_0031072 3300045976 Bacteria 4492
101 Ga0495592_0000214 3300046454 Bacteria 49513
102 Ga0495592_0153863 3300046454 Bacteria 1588
103 Ga0495603_0007487 3300046455 Bacteria 6564
104 Ga0495641_0000001 3300046461 Bacteria 485224
105 Ga0495651_0046576 3300046462 Bacteria 3356
106 Ga0495651_0076935 3300046462 Bacteria 2527
107 Ga0495651_0157187 3300046462 Bacteria 1633
108 Ga0495653_0028989 3300046463 Bacteria 4424
109 Ga0495653_0035178 3300046463 Bacteria 3955
110 Ga0495582_0000012 3300046473 Bacteria 112893
111 Ga0495639_0043325 3300046475 Bacteria 2033
112 Ga0495662_0003082 3300046476 Bacteria 8402
113 Ga0495608_0015908 3300046511 Bacteria 5206
114 Ga0495608_0057527 3300046511 Bacteria 2566
115 Ga0495618_0000087 3300046514 Bacteria 66305
116 Ga0495620_0000119 3300046515 Bacteria 63487
117 Ga0495628_0002341 3300046516 Bacteria 17105
118 Ga0495628_0011200 3300046516 Bacteria 7588
119 Ga0495630_0002802 3300046517 Bacteria 12100
120 Ga0495630_0017461 3300046517 Bacteria 5257
121 Ga0495630_0112901 3300046517 Bacteria 2058
122 Ga0495644_0003088 3300046523 Bacteria 6593
123 Ga0495652_0000086 3300046529 Bacteria 99373
124 Ga0495640_0006202 3300046533 Bacteria 9469
125 Ga0495586_0170666 3300046535 Bacteria 1229
126 Ga0495587_0001105 3300046536 Bacteria 17728
127 Ga0495587_0032389 3300046536 Bacteria 3161
128 Ga0495587_0060563 3300046536 Bacteria 2219
129 Ga0495667_0000015 3300046559 Bacteria 200377
130 Ga0495656_0000384 3300046615 Bacteria 14728
131 Ga0495634_0000982 3300046642 Bacteria 26859
132 Ga0495634_0005363 3300046642 Bacteria 9880
133 Ga0495634_0032428 3300046642 Bacteria 3593
134 Ga0495634_0062183 3300046642 Bacteria 2480
135 Ga0495635_0000036 3300046663 Bacteria 95138
136 Ga0495657_0004838 3300046675 Bacteria 10736
137 Ga0495647_0000013 3300046681 Bacteria 88029
138 Ga0495658_0000024 3300046683 Bacteria 81300
139 Ga0495669_0000212 3300046684 Bacteria 35265
140 Ga0495613_0000342 3300046689 Bacteria 41726
141 Ga0495613_0023790 3300046689 Bacteria 4564
142 Ga0495624_0000013 3300046690 Bacteria 115278
143 Ga0495624_0021202 3300046690 Bacteria 4312
144 Ga0495670_0010438 3300046691 Bacteria 4563
145 Ga0495600_0000846 3300046809 Bacteria 16323
146 Ga0495604_0000131 3300047317 Bacteria 63337
147 Ga0495604_0063754 3300047317 Bacteria 2810
148 Ga0495674_0000007 3300047319 Bacteria 336257
149 Ga0495680_0002569 3300047322 Bacteria 18505
150 Ga0495680_0003396 3300047322 Bacteria 15711
151 Ga0495680_0031267 3300047322 Bacteria 4335
152 Ga0495680_0164068 3300047322 Bacteria 1612
153 Ga0495680_0165659 3300047322 Bacteria 1603
154 Ga0495675_0016849 3300047444 Bacteria 4623
155 Ga0495679_010148 3300047446 Bacteria 3717
156 Ga0495686_0069640 3300047472 Bacteria 2168
157 Ga0495602_0025894 3300048088 Bacteria 5669
158 Ga0496100_0000008 3300048903 Bacteria 231974
159 Ga0496100_0068767 3300048903 Bacteria 2356
160 Ga0496101_0000016 3300048904 Bacteria 240753
161 Ga0496101_0010139 3300048904 Bacteria 6213
162 Ga0496102_0060684 3300048905 Bacteria 3459
163 Ga0496104_0000002 3300048907 Bacteria 686017
164 Ga0496104_0012342 3300048907 Bacteria 7679
165 Ga0496105_0000001 3300048908 Bacteria 1328178
166 Ga0496105_0005180 3300048908 Bacteria 9880
167 Ga0496106_0000086 3300048909 Bacteria 73933
168 Ga0496107_0000009 3300048910 Bacteria 231682
169 Ga0496107_0102106 3300048910 Bacteria 2103
170 Ga0496107_0228519 3300048910 Bacteria 1384
171 Ga0496108_0000002 3300048911 Bacteria 700890
172 Ga0496109_0000001 3300048912 Bacteria 700852
173 Ga0496110_0021108 3300048913 Bacteria 5505
174 Ga0496112_0000002 3300048915 Bacteria 782039
175 Ga0496113_0019588 3300048916 Bacteria 4737
176 Ga0496114_0000010 3300048917 Bacteria 363396
177 Ga0496114_0043296 3300048917 Bacteria 3733
178 Ga0496115_0000363 3300048918 Bacteria 37766
179 Ga0496115_0030819 3300048918 Bacteria 4222
180 Ga0496117_0013219 3300048920 Bacteria 7215
181 Ga0496118_0001033 3300048921 Bacteria 43302
182 Ga0496118_0095918 3300048921 Bacteria 2023
183 Ga0496119_0048124 3300048922 Bacteria 2647
184 Ga0496120_0006301 3300048923 Bacteria 9141
185 Ga0496120_0028298 3300048923 Bacteria 3436
186 Ga0496121_0007624 3300048924 Bacteria 13015
187 Ga0496124_0120890 3300048927 Bacteria 2093
188 Ga0496126_0042340 3300048929 Bacteria 4206
189 Ga0496126_0055440 3300048929 Bacteria 3586
190 Ga0501031_0002606 3300049568 Bacteria 11483
191 Ga0501032_0005577 3300049569 Bacteria 9333
192 Ga0501033_0002600 3300049570 Bacteria 15219
193 Ga0501034_0090081 3300049571 Bacteria 3065
194 Ga0501036_0004508 3300049572 Bacteria 11240
195 Ga0501037_0003696 3300049573 Bacteria 11103
196 Ga0501038_0005106 3300049574 Bacteria 12200
197 Ga0501039_0006183 3300049575 Bacteria 9090
198 Ga0501040_0068610 3300049576 Bacteria 2446
199 Ga0501042_0017458 3300049578 Bacteria 4948
200 Ga0501043_0001373 3300049579 Bacteria 21346
201 Ga0501043_0090210 3300049579 Bacteria 2410
202 Ga0501046_0005491 3300049580 Bacteria 11324
203 Ga0501047_0001663 3300049581 Bacteria 21616
204 Ga0501047_0009697 3300049581 Bacteria 9105
205 Ga0501047_0215872 3300049581 Bacteria 1775
206 Ga0501048_0003974 3300049582 Bacteria 11230
207 Ga0501070_0001612 3300049586 Bacteria 20022
208 Ga0501070_0045609 3300049586 Bacteria 3646
209 Ga0501071_0033175 3300049587 Bacteria 3669
210 Ga0501072_0023448 3300049588 Bacteria 4795
211 Ga0501073_0011453 3300049589 Bacteria 6488
212 Ga0501074_0020580 3300049590 Bacteria 4795
213 Ga0501074_0033271 3300049590 Bacteria 3735
214 Ga0501075_0040603 3300049591 Bacteria 3485
215 Ga0501076_0042736 3300049592 Bacteria 3569
216 Ga0501079_0012938 3300049741 Bacteria 6367
217 Ga0501080_0006268 3300049742 Bacteria 10674
218 Ga0501080_0010866 3300049742 Bacteria 8333
219 Ga0501083_0005380 3300049744 Bacteria 9058
220 Ga0501083_0012107 3300049744 Bacteria 6039
221 Ga0501083_0025826 3300049744 Bacteria 4065
222 Ga0501035_0000711 3300049822 Bacteria 36002
223 Ga0501044_0008575 3300049823 Bacteria 11196
224 Ga0501044_0038409 3300049823 Bacteria 4999
225 Ga0501045_0035728 3300049824 Bacteria 3608
226 nmdc:mga09592_196056_c1 3300050508 Bacteria 1748
227 nmdc:mga0a205_327_c2 3300050515 Bacteria 14800
228 nmdc:mga0a205_9_c2 3300050515 Bacteria 69167
229 Ga0495601_0000045 3300053077 Bacteria 73391
230 Ga0495601_0018057 3300053077 Bacteria 4289
231 Ga0495601_0033441 3300053077 Bacteria 3204
232 Ga0495601_0109297 3300053077 Bacteria 1790
233 Ga0495601_0144174 3300053077 Bacteria 1554
234 Ga0495612_0007352 3300053078 Bacteria 4502
235 Ga0495595_0000321 3300053084 Bacteria 18730
236 Ga0495619_0000015 3300053085 Bacteria 252787
237 Ga0495619_0000512 3300053085 Bacteria 25819
238 Ga0495619_0011953 3300053085 Bacteria 5469
239 Ga0495619_0016757 3300053085 Bacteria 4639
240 Ga0500614_000031 3300053123 Bacteria 31527
241 Ga0501084_0047425 3300054114 Bacteria 3598
242 Ga0501082_0005006 3300060353 Bacteria 11566
243 Ga0105240_10125503
244 JGI24034J26672_10000335
245 JGI24742J22300_10004550
246 Ga0070683_100030235
247 Ga0070683_100037855
248 Ga0070677_10000031
249 Ga0070666_10025059
250 Ga0068868_100000755
251 Ga0070660_100208995
252 Ga0070689_100156393
253 Ga0070691_10004825
254 Ga0070674_100000003
255 Ga0070674_100000028
256 Ga0070673_100000678
257 Ga0070659_100019624
258 Ga0070667_100045359
259 Ga0070714_100130800
260 Ga0070700_100061571
261 Ga0070663_100018089
262 Ga0070681_10053527
263 Ga0068867_100000400
264 Ga0070685_10115180
265 Ga0070679_100005814
266 Ga0070679_100006765
267 Ga0070693_100001909
268 Ga0068864_100000044
269 Ga0068866_10000002
270 Ga0068866_10000045
271 Ga0068858_100000042
272 Ga0068858_100028031
273 Ga0068860_100002962
274 Ga0081455_10225150
275 Ga0081540_1003261
276 Ga0075363_100117104
277 Ga0075367_10079163
278 Ga0075431_100102662
279 Ga0075433_10000058
280 Ga0075433_10118772
281 Ga0105245_10507249
282 Ga0105247_10000838
283 Ga0105238_10000524
284 Ga0105238_10159885
285 Ga0105249_10000095
286 Ga0105239_10325604
287 Ga0157374_10080321
288 Ga0157375_10001183
289 Ga0163163_10107274
290 Ga0157380_10000461
291 Ga0157379_10028796
292 Ga0157379_10179759
293 Ga0163161_10000274
294 Ga0206356_11812713
295 Ga0207682_10000067
296 Ga0207642_10000001
297 Ga0207642_10000003
298 Ga0207642_10000004
299 Ga0207642_10004030
300 Ga0207710_10001615
301 Ga0207680_10064276
302 Ga0207707_10024470
303 Ga0207693_10124263
304 Ga0207652_10000177
305 Ga0207652_10004885
306 Ga0207694_10000067
307 Ga0207687_10174342
308 Ga0207664_10128653
309 Ga0207690_10011834
310 Ga0207706_10000338
311 Ga0207669_10000014
312 Ga0207669_10000024
313 Ga0207661_10108334
314 Ga0207651_10000388
315 Ga0207658_10031099
316 Ga0207677_10000877
317 Ga0207703_10000060
318 Ga0207639_10014566
319 Ga0207678_10003784
320 Ga0207708_10077639
321 Ga0207648_10004540
322 Ga0207676_10000043
323 Ga0207683_10134078
324 Ga0268266_10000233
325 Ga0268264_10001556
326 Ga0265337_1000004
327 Ga0265326_10000091
328 Ga0265322_10000006
329 Ga0265324_10000269
330 Ga0265328_10002913
331 Ga0265320_10000001
332 Ga0265329_10012313
333 Ga0265331_10010023
334 Ga0265327_10000003
335 Ga0265314_10000567
336 Ga0307406_10090843
337 Ga0307416_100233806
338 Ga0373955_0151066
339 Ga0373937_0014033
340 Ga0466963_0000021
341 Ga0466957_0072231
342 Ga0466967_0031072
343 Ga0495592_0000214
344 Ga0495592_0153863
345 Ga0495603_0007487
346 Ga0495641_0000001
347 Ga0495651_0046576
348 Ga0495651_0076935
349 Ga0495651_0157187
350 Ga0495653_0028989
351 Ga0495653_0035178
352 Ga0495582_0000012
353 Ga0495639_0043325
354 Ga0495662_0003082
355 Ga0495608_0015908
356 Ga0495608_0057527
357 Ga0495618_0000087
358 Ga0495620_0000119
359 Ga0495628_0002341
360 Ga0495628_0011200
361 Ga0495630_0002802
362 Ga0495630_0017461
363 Ga0495630_0112901
364 Ga0495644_0003088
365 Ga0495652_0000086
366 Ga0495640_0006202
367 Ga0495586_0170666
368 Ga0495587_0001105
369 Ga0495587_0032389
370 Ga0495587_0060563
371 Ga0495667_0000015
372 Ga0495656_0000384
373 Ga0495634_0000982
374 Ga0495634_0005363
375 Ga0495634_0032428
376 Ga0495634_0062183
377 Ga0495635_0000036
378 Ga0495657_0004838
379 Ga0495647_0000013
380 Ga0495658_0000024
381 Ga0495669_0000212
382 Ga0495613_0000342
383 Ga0495613_0023790
384 Ga0495624_0000013
385 Ga0495624_0021202
386 Ga0495670_0010438
387 Ga0495600_0000846
388 Ga0495604_0000131
389 Ga0495604_0063754
390 Ga0495674_0000007
391 Ga0495680_0002569
392 Ga0495680_0003396
393 Ga0495680_0031267
394 Ga0495680_0164068
395 Ga0495680_0165659
396 Ga0495675_0016849
397 Ga0495679_010148
398 Ga0495686_0069640
399 Ga0495602_0025894
400 Ga0496100_0000008
401 Ga0496100_0068767
402 Ga0496101_0000016
403 Ga0496101_0010139
404 Ga0496102_0060684
405 Ga0496104_0000002
406 Ga0496104_0012342
407 Ga0496105_0000001
408 Ga0496105_0005180
409 Ga0496106_0000086
410 Ga0496107_0000009
411 Ga0496107_0102106
412 Ga0496107_0228519
413 Ga0496108_0000002
414 Ga0496109_0000001
415 Ga0496110_0021108
416 Ga0496112_0000002
417 Ga0496113_0019588
418 Ga0496114_0000010
419 Ga0496114_0043296
420 Ga0496115_0000363
421 Ga0496115_0030819
422 Ga0496117_0013219
423 Ga0496118_0001033
424 Ga0496118_0095918
425 Ga0496119_0048124
426 Ga0496120_0006301
427 Ga0496120_0028298
428 Ga0496121_0007624
429 Ga0496124_0120890
430 Ga0496126_0042340
431 Ga0496126_0055440
432 Ga0501031_0002606
433 Ga0501032_0005577
434 Ga0501033_0002600
435 Ga0501034_0090081
436 Ga0501036_0004508
437 Ga0501037_0003696
438 Ga0501038_0005106
439 Ga0501039_0006183
440 Ga0501040_0068610
441 Ga0501042_0017458
442 Ga0501043_0001373
443 Ga0501043_0090210
444 Ga0501046_0005491
445 Ga0501047_0001663
446 Ga0501047_0009697
447 Ga0501047_0215872
448 Ga0501048_0003974
449 Ga0501070_0001612
450 Ga0501070_0045609
451 Ga0501071_0033175
452 Ga0501072_0023448
453 Ga0501073_0011453
454 Ga0501074_0020580
455 Ga0501074_0033271
456 Ga0501075_0040603
457 Ga0501076_0042736
458 Ga0501079_0012938
459 Ga0501080_0006268
460 Ga0501080_0010866
461 Ga0501083_0005380
462 Ga0501083_0012107
463 Ga0501083_0025826
464 Ga0501035_0000711
465 Ga0501044_0008575
466 Ga0501044_0038409
467 Ga0501045_0035728
468 nmdc:mga09592_196056_c1
469 nmdc:mga0a205_327_c2
470 nmdc:mga0a205_9_c2
471 Ga0495601_0000045
472 Ga0495601_0018057
473 Ga0495601_0033441
474 Ga0495601_0109297
475 Ga0495601_0144174
476 Ga0495612_0007352
477 Ga0495595_0000321
478 Ga0495619_0000015
479 Ga0495619_0000512
480 Ga0495619_0011953
481 Ga0495619_0016757
482 Ga0500614_000031
483 Ga0501084_0047425
484 Ga0501082_0005006

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13365

Trypsin_2

Trypsin-like peptidase domain

104

251

0.96

PF13180

PDZ_2

PDZ domain

290

396

0.95

PF00089

Trypsin

Trypsin

90

277

0.74

Structural Annotation

Top 5 Hits

ID Description Score Start End
6z0e-assembly2.cif.gz_B htra1 inactive protease domain s328a with carasil mutation r274q 0.938 48 249
3nwu-assembly1.cif.gz_B substrate induced remodeling of the active site regulates htra1 activity 0.9356 48 243
8auk-assembly1.cif.gz_E cryo-em structure of human birc6 in complex with htra2. 0.9179 48 242
7vge-assembly1.cif.gz_B structure of the pdz deleted variant of htra2 protease (s306a) 0.9156 41 242
7vge-assembly1.cif.gz_C structure of the pdz deleted variant of htra2 protease (s306a) 0.914 48 243
ID Description Score Start End Superfamily
af_A0A0N7KSP8_147_285_2.40.10.120 Mainly Beta;Beta Barrel;Thrombin, subunit H; 0.9431 48 169 2.40.10.120
3mh4B01 Mainly Beta;Beta Barrel;Thrombin, subunit H;Trypsin-like serine proteases 0.939 56 144 2.40.10.10
5y2dA02 Mainly Beta;Beta Barrel;Thrombin, subunit H;Trypsin-like serine proteases 0.9372 148 237 2.40.10.10
af_O07175_267_353_2.30.42.10 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.9327 257 368 2.30.42.10
3gdvC03 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.9211 256 368 2.30.42.10
ID Description Score Start End GO Terms
AF-A0A3C1DX25-F1-model_v4 Peptidase S1 0.9477 47 243 GO:0004252
GO:0006508
AF-A0A7W1LF20-F1-model_v4 Trypsin-like peptidase domain-containing protein 0.9456 138 369 GO:0004252
GO:0006508
AF-A0A7Y6CCZ3-F1-model_v4 PDZ domain-containing protein 0.9414 192 367 GO:0004252
GO:0006508
AF-A0A536B8I3-F1-model_v4 Trypsin-like serine protease 0.9332 47 246 GO:0004252
GO:0006508
GO:0016020
AF-A0A6F8YW69-F1-model_v4 Peptidase S1 domain-containing protein 0.9257 105 243 GO:0004252
GO:0006508

Map