F354593

General Info

Members Datasets Scaffolds Average Seq Length
242 137 484 193

Family's Representative Sequence

Representative Sequence 3300009093|Ga0105240_10376954|Ga0105240_103769542
Length 218
Sequence VPHFNLSENLSAKDGRALTKQKYKVMKSSTRSGAAISATAIQTAKSLRTLYFVRTAFSVIWVILLSVFVKTNNGIARALFIIYPAWDVFATWLDIKANPPHTSKIPQYANVVTGILTTIGVALALQKGVPEALMVFGLWAFIAGLIQLVLGLRRRKELGGQWPMIISGAQSMLAGISFLLLAHSPSMGINSLAGYSAFGAFYFLLAAIRLSKTIKAAQ

Samples

Sample ID Description Type Environment
1 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
2 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
3 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
4 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
5 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
6 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
7 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
8 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
9 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
10 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
11 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
12 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
13 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
14 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
15 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
16 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
17 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
18 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
19 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
20 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
21 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
22 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
23 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
24 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
25 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
26 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
27 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
28 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
29 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
30 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
31 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
32 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
33 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
34 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
35 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
36 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
37 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
38 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
39 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
40 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
41 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
42 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
43 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
44 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
45 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
46 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
47 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
48 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
49 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
50 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
51 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
52 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
53 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
54 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
55 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
56 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
57 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
58 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
59 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
60 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
62 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
64 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
65 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
66 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
67 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
92 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
93 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
94 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
95 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
96 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
97 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
98 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
99 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
100 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
101 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
102 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
103 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
104 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
105 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
106 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
107 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
108 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
109 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
110 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
111 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
112 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
113 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
114 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
115 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
116 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
117 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
118 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
119 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
120 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
121 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
122 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
123 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
124 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
125 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
126 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
127 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
128 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
129 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
130 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
131 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
132 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
133 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
134 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
135 2929154850 Filimonas sp. R-72421 Hybrid assembly Isolate Unclassified
136 2929239360 Chitinophaga sp. R-73072 Hybrid assembly Isolate Unclassified
137 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.52
Metatranscriptomes 0
Isolates 2.48

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 19.42
Nodule 0
Rhizoplane 0.83
Rhizosphere 67.36
Stem 0
Stem Tuber 0
Unclassified 11.98

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105240_10376954 3300009093 Unclassified 1603
2 JGI24739J22299_10000998 3300001989 Bacteria 10529
3 JGI24739J22299_10002187 3300001989 Bacteria 7508
4 JGI24737J22298_10000148 3300001990 Bacteria 21941
5 JGI24735J21928_10000020 3300002067 Bacteria 108706
6 JGI25157J39369_1002433 3300002741 Bacteria 4653
7 JGI25165J46597_1001451 3300003214 Bacteria 12487
8 rootH1_10058160 3300003316 Bacteria 2122
9 rootH1_10126330 3300003316 Bacteria 3261
10 rootH2_10001530 3300003320 Bacteria 103971
11 rootH2_10033959 3300003320 Bacteria 34491
12 rootH2_10108180 3300003320 Bacteria 2292
13 rootH2_10233371 3300003320 Bacteria 4562
14 rootH2_10309600 3300003320 Bacteria 1236
15 rootL2_10076045 3300003322 Bacteria 4977
16 rootL2_10317596 3300003322 Bacteria 1470
17 rootH1_10008921 3300003323 Bacteria 20459
18 rootH1_10028162 3300003323 Bacteria 9421
19 rootH1_10089197 3300003323 Bacteria 3011
20 rootH1_10153747 3300003323 Bacteria 5564
21 rootH1_10213198 3300003323 Bacteria 3080
22 rootH1_10260198 3300003323 Bacteria 1291
23 JGI25160J50197_1007512 3300003354 Bacteria 4256
24 Ga0055536_1008939 3300003781 Bacteria 4225
25 Ga0055528_1000179 3300003790 Bacteria 53605
26 Ga0055530_10004552 3300003791 Bacteria 7083
27 Ga0055531_10000026 3300003794 Bacteria 160364
28 Ga0055531_10049182 3300003794 Bacteria 1129
29 Ga0065165_1000078 3300005262 Bacteria 162412
30 Ga0065165_1000280 3300005262 Bacteria 87088
31 Ga0065165_1006348 3300005262 Bacteria 6240
32 Ga0065714_10068759 3300005288 Bacteria 4561
33 Ga0068868_100161587 3300005338 Bacteria 1850
34 Ga0068868_100818576 3300005338 Unclassified 841
35 Ga0070660_100049212 3300005339 Bacteria 3240
36 Ga0070669_100215541 3300005353 Bacteria 1516
37 Ga0070659_100072738 3300005366 Bacteria 2736
38 Ga0070667_101212824 3300005367 Bacteria 706
39 Ga0070678_100011291 3300005456 Bacteria 5503
40 Ga0070662_100001095 3300005457 Bacteria 16503
41 Ga0068853_100005944 3300005539 Bacteria 9639
42 Ga0068853_100049233 3300005539 Bacteria 3621
43 Ga0068853_100519008 3300005539 Unclassified 1126
44 Ga0068853_100644706 3300005539 Bacteria 1008
45 Ga0070665_100000012 3300005548 Bacteria 508937
46 Ga0068855_100274994 3300005563 Bacteria 1872
47 Ga0068857_100071467 3300005577 Bacteria 3091
48 Ga0068854_100059679 3300005578 Bacteria 2757
49 Ga0068856_100559868 3300005614 Unclassified 1164
50 Ga0068870_10026856 3300005840 Bacteria 2874
51 Ga0075366_10006342 3300006195 Bacteria 6476
52 Ga0097621_100000738 3300006237 Bacteria 22914
53 Ga0097621_100450568 3300006237 Unclassified 1159
54 Ga0068871_100000248 3300006358 Bacteria 37581
55 Ga0068871_100137971 3300006358 Unclassified 2072
56 Ga0068865_100000429 3300006881 Bacteria 23360
57 Ga0105240_10000242 3300009093 Bacteria 108001
58 Ga0105240_10007738 3300009093 Bacteria 15544
59 Ga0105240_10008278 3300009093 Bacteria 14885
60 Ga0105240_10045357 3300009093 Bacteria 5577
61 Ga0105240_10133582 3300009093 Unclassified 2973
62 Ga0105240_10627433 3300009093 Bacteria 1180
63 Ga0105240_11134227 3300009093 Eukaryota 831
64 Ga0105241_10001503 3300009174 Bacteria 17890
65 Ga0105241_10003686 3300009174 Bacteria 11382
66 Ga0105241_10006704 3300009174 Bacteria 8474
67 Ga0105241_10105093 3300009174 Unclassified 2251
68 Ga0105242_10292916 3300009176 Bacteria 1483
69 Ga0105237_10000963 3300009545 Bacteria 38740
70 Ga0105237_10043958 3300009545 Bacteria 4498
71 Ga0105237_10051675 3300009545 Bacteria 4128
72 Ga0105237_10271209 3300009545 Unclassified 1700
73 Ga0105237_10326617 3300009545 Bacteria 1538
74 Ga0105237_10443798 3300009545 Unclassified 1303
75 Ga0105237_10797569 3300009545 Bacteria 951
76 Ga0105238_10026567 3300009551 Bacteria 5903
77 Ga0105238_10057399 3300009551 Plasmid 3903
78 Ga0105239_10000013 3300010375 Bacteria 327371
79 Ga0105239_10000355 3300010375 Bacteria 67024
80 Ga0105239_10036715 3300010375 Bacteria 5377
81 Ga0105239_10086694 3300010375 Bacteria 3451
82 Ga0105239_10142828 3300010375 Bacteria 2669
83 Ga0105239_10200241 3300010375 Unclassified 2237
84 Ga0105239_10348497 3300010375 Bacteria 1672
85 Ga0105239_10870854 3300010375 Unclassified 1033
86 Ga0105246_10062189 3300011119 Bacteria 2600
87 Ga0157373_10020590 3300013100 Bacteria 4792
88 Ga0157373_10031076 3300013100 Bacteria 3843
89 Ga0157371_10019766 3300013102 Bacteria 4962
90 Ga0157371_10021538 3300013102 Bacteria 4731
91 Ga0157371_10129210 3300013102 Bacteria 1797
92 Ga0157370_10003065 3300013104 Bacteria 19819
93 Ga0157370_10048780 3300013104 Bacteria 4056
94 Ga0157369_10033692 3300013105 Bacteria 5627
95 Ga0157369_10067633 3300013105 Bacteria 3840
96 Ga0157374_10041848 3300013296 Bacteria 4224
97 Ga0157378_10046351 3300013297 Bacteria 3864
98 Ga0163162_10000366 3300013306 Bacteria 40923
99 Ga0163162_10003374 3300013306 Bacteria 15280
100 Ga0163162_10061432 3300013306 Bacteria 3795
101 Ga0157372_10001279 3300013307 Bacteria 27221
102 Ga0157372_10181288 3300013307 Bacteria 2438
103 Ga0157372_10379681 3300013307 Bacteria 1647
104 Ga0157372_10488155 3300013307 Bacteria 1436
105 Ga0157372_11075414 3300013307 Bacteria 931
106 Ga0157375_10076897 3300013308 Bacteria 3366
107 Ga0157377_10022679 3300014745 Bacteria 3319
108 Ga0182007_10023858 3300015262 Bacteria 2147
109 Ga0163161_10013015 3300017792 Bacteria 5781
110 Ga0163161_10183075 3300017792 Bacteria 1607
111 Ga0207427_100482 3300025231 Bacteria 21562
112 Ga0209437_100124 3300025233 Bacteria 199789
113 Ga0209437_100170 3300025233 Bacteria 142489
114 Ga0209646_1000045 3300025246 Bacteria 333765
115 Ga0209026_1000075 3300025250 Bacteria 202874
116 Ga0209129_1018128 3300025258 Bacteria 1360
117 Ga0209233_1000266 3300025261 Bacteria 76176
118 Ga0209455_1005623 3300025272 Bacteria 3837
119 Ga0209673_1000014 3300025273 Bacteria 537082
120 Ga0209673_1000018 3300025273 Bacteria 458281
121 Ga0209676_1000616 3300025292 Bacteria 52007
122 Ga0209564_1003474 3300025295 Bacteria 10744
123 Ga0209758_1006266 3300025297 Bacteria 8658
124 Ga0209050_1000481 3300025298 Bacteria 70155
125 Ga0207426_1008487 3300025302 Bacteria 4143
126 Ga0209051_1019758 3300025303 Bacteria 2927
127 Ga0209257_1000004 3300025304 Bacteria 1678347
128 Ga0209257_1003838 3300025304 Bacteria 12312
129 Ga0207647_10000116 3300025904 Bacteria 61857
130 Ga0207647_10051839 3300025904 Bacteria 2534
131 Ga0207647_10111127 3300025904 Bacteria 1620
132 Ga0207645_10003546 3300025907 Bacteria 11810
133 Ga0207654_10001630 3300025911 Bacteria 11728
134 Ga0207654_10042968 3300025911 Unclassified 2560
135 Ga0207654_10067112 3300025911 Bacteria 2118
136 Ga0207654_10480289 3300025911 Bacteria 875
137 Ga0207695_10002900 3300025913 Bacteria 24810
138 Ga0207695_10006255 3300025913 Bacteria 15499
139 Ga0207695_10006837 3300025913 Bacteria 14685
140 Ga0207695_10151179 3300025913 Bacteria 2261
141 Ga0207695_10268139 3300025913 Unclassified 1603
142 Ga0207671_10004762 3300025914 Bacteria 12810
143 Ga0207671_10026711 3300025914 Bacteria 4322
144 Ga0207671_10058847 3300025914 Bacteria 2849
145 Ga0207671_10168815 3300025914 Unclassified 1698
146 Ga0207681_10187969 3300025923 Bacteria 1578
147 Ga0207694_10421916 3300025924 Bacteria 1111
148 Ga0207694_10435453 3300025924 Eukaryota 1093
149 Ga0207644_10209234 3300025931 Bacteria 1541
150 Ga0207706_10000007 3300025933 Bacteria 211081
151 Ga0207704_10000124 3300025938 Bacteria 41992
152 Ga0207667_10077325 3300025949 Unclassified 3452
153 Ga0207667_10484608 3300025949 Bacteria 1255
154 Ga0207651_10107246 3300025960 Bacteria 2087
155 Ga0207640_10852663 3300025981 Bacteria 793
156 Ga0207658_10971514 3300025986 Bacteria 774
157 Ga0207677_10167106 3300026023 Unclassified 1716
158 Ga0207639_10036757 3300026041 Bacteria 3632
159 Ga0207639_10075606 3300026041 Bacteria 2649
160 Ga0207639_10240054 3300026041 Bacteria 1575
161 Ga0207639_10582814 3300026041 Unclassified 1030
162 Ga0207702_10683252 3300026078 Unclassified 1011
163 Ga0207648_10003695 3300026089 Bacteria 16019
164 Ga0207674_10083398 3300026116 Bacteria 3196
165 Ga0207674_10654033 3300026116 Unclassified 1015
166 Ga0207683_10021741 3300026121 Bacteria 5499
167 Ga0207698_10360875 3300026142 Unclassified 1376
168 Ga0207698_10694696 3300026142 Bacteria 1012
169 Ga0268266_10000039 3300028379 Bacteria 324579
170 Ga0268266_10000073 3300028379 Bacteria 232074
171 Ga0307517_10017796 3300028786 Bacteria 9232
172 Ga0307517_10020980 3300028786 Bacteria 8286
173 Ga0307517_10248043 3300028786 Bacteria 1048
174 Ga0307515_10000172 3300028794 Bacteria 159265
175 Ga0307515_10000349 3300028794 Bacteria 114163
176 Ga0307515_10216912 3300028794 Bacteria 1742
177 Ga0307405_10010846 3300031731 Bacteria 4745
178 Ga0307412_10080135 3300031911 Bacteria 2255
179 Ga0307414_10044114 3300032004 Bacteria 3042
180 Ga0307510_10013796 3300033180 Bacteria 9579
181 Ga0307510_10058075 3300033180 Bacteria 4010
182 Ga0466970_0019079 3300044765 Bacteria 3554
183 Ga0466970_0344564 3300044765 Unclassified 845
184 Ga0495638_0012774 3300046460 Bacteria 5739
185 Ga0495638_0146053 3300046460 Bacteria 1376
186 Ga0495651_0108312 3300046462 Unclassified 2058
187 Ga0495650_0058692 3300046471 Bacteria 1552
188 Ga0495650_0153272 3300046471 Bacteria 826
189 Ga0495585_0000057 3300046492 Bacteria 113069
190 Ga0495607_0260319 3300046501 Unclassified 831
191 Ga0495606_0003909 3300046507 Bacteria 15337
192 Ga0495606_0007306 3300046507 Bacteria 9946
193 Ga0495606_0012523 3300046507 Bacteria 6793
194 Ga0495606_0018286 3300046507 Bacteria 5263
195 Ga0495610_0001711 3300046512 Bacteria 19236
196 Ga0495631_0304101 3300046518 Bacteria 678
197 Ga0495637_0018010 3300046520 Bacteria 3281
198 Ga0495637_0244411 3300046520 Bacteria 647
199 Ga0495648_0029349 3300046524 Unclassified 3652
200 Ga0495633_0006218 3300046558 Bacteria 7130
201 Ga0495625_0015714 3300046660 Bacteria 5981
202 Ga0495625_0028787 3300046660 Bacteria 4161
203 Ga0495625_0082433 3300046660 Bacteria 2237
204 Ga0495625_0114751 3300046660 Bacteria 1838
205 Ga0495649_0061113 3300046694 Bacteria 2026
206 Ga0495589_0181513 3300046794 Bacteria 998
207 Ga0495683_0043840 3300047323 Bacteria 2251
208 Ga0495687_000040 3300047443 Bacteria 230786
209 Ga0495687_003027 3300047443 Bacteria 12646
210 Ga0495687_072836 3300047443 Bacteria 1371
211 Ga0495686_0000040 3300047472 Bacteria 301210
212 Ga0495686_0000420 3300047472 Bacteria 66708
213 Ga0495686_0100300 3300047472 Bacteria 1747
214 Ga0495686_0314830 3300047472 Unclassified 859
215 Ga0495614_0015432 3300048089 Bacteria 3330
216 Ga0496101_0154513 3300048904 Bacteria 1757
217 nmdc:mga0k408_1967_c1 3300050493 Bacteria 11007
218 nmdc:mga0k408_8096_c1 3300050493 Bacteria 5068
219 Ga0500644_0020812 3300053088 Bacteria 1956
220 Ga0500646_0004180 3300053090 Unclassified 3664
221 Ga0500583_0000286 3300053092 Bacteria 17541
222 Ga0500583_0154704 3300053092 Bacteria 1142
223 Ga0500641_0039967 3300053096 Unclassified 1892
224 Ga0500562_000083 3300053108 Bacteria 41350
225 Ga0500618_000004 3300053125 Bacteria 293180
226 Ga0500618_002631 3300053125 Bacteria 6616
227 Ga0500642_0089518 3300053130 Unclassified 1421
228 Ga0500652_017874 3300053131 Bacteria 2607
229 Ga0500655_005372 3300053133 Bacteria 2313
230 Ga0500655_062431 3300053133 Bacteria 752
231 Ga0500568_0035475 3300053139 Bacteria 2035
232 Ga0500588_0045253 3300053146 Bacteria 1347
233 Ga0500622_0000051 3300053156 Bacteria 145514
234 Ga0500622_0001220 3300053156 Bacteria 21125
235 Ga0500627_0337794 3300053158 Bacteria 652
236 Ga0500637_0158279 3300053178 Bacteria 1306
237 2599481237 2599185184 Bacteria 6430550
238 2928081834 2928078545 Bacteria 6534839
239 2928151857 2928147474 Bacteria 6512076
240 2929155854 2929154850 Bacteria 6753285
241 2929241475 2929239360 Bacteria 7745570
242 2932087164 2932082852 Bacteria 6563563
243 Ga0105240_10376954
244 JGI24739J22299_10000998
245 JGI24739J22299_10002187
246 JGI24737J22298_10000148
247 JGI24735J21928_10000020
248 JGI25157J39369_1002433
249 JGI25165J46597_1001451
250 rootH1_10058160
251 rootH1_10126330
252 rootH2_10001530
253 rootH2_10033959
254 rootH2_10108180
255 rootH2_10233371
256 rootH2_10309600
257 rootL2_10076045
258 rootL2_10317596
259 rootH1_10008921
260 rootH1_10028162
261 rootH1_10089197
262 rootH1_10153747
263 rootH1_10213198
264 rootH1_10260198
265 JGI25160J50197_1007512
266 Ga0055536_1008939
267 Ga0055528_1000179
268 Ga0055530_10004552
269 Ga0055531_10000026
270 Ga0055531_10049182
271 Ga0065165_1000078
272 Ga0065165_1000280
273 Ga0065165_1006348
274 Ga0065714_10068759
275 Ga0068868_100161587
276 Ga0068868_100818576
277 Ga0070660_100049212
278 Ga0070669_100215541
279 Ga0070659_100072738
280 Ga0070667_101212824
281 Ga0070678_100011291
282 Ga0070662_100001095
283 Ga0068853_100005944
284 Ga0068853_100049233
285 Ga0068853_100519008
286 Ga0068853_100644706
287 Ga0070665_100000012
288 Ga0068855_100274994
289 Ga0068857_100071467
290 Ga0068854_100059679
291 Ga0068856_100559868
292 Ga0068870_10026856
293 Ga0075366_10006342
294 Ga0097621_100000738
295 Ga0097621_100450568
296 Ga0068871_100000248
297 Ga0068871_100137971
298 Ga0068865_100000429
299 Ga0105240_10000242
300 Ga0105240_10007738
301 Ga0105240_10008278
302 Ga0105240_10045357
303 Ga0105240_10133582
304 Ga0105240_10627433
305 Ga0105240_11134227
306 Ga0105241_10001503
307 Ga0105241_10003686
308 Ga0105241_10006704
309 Ga0105241_10105093
310 Ga0105242_10292916
311 Ga0105237_10000963
312 Ga0105237_10043958
313 Ga0105237_10051675
314 Ga0105237_10271209
315 Ga0105237_10326617
316 Ga0105237_10443798
317 Ga0105237_10797569
318 Ga0105238_10026567
319 Ga0105238_10057399
320 Ga0105239_10000013
321 Ga0105239_10000355
322 Ga0105239_10036715
323 Ga0105239_10086694
324 Ga0105239_10142828
325 Ga0105239_10200241
326 Ga0105239_10348497
327 Ga0105239_10870854
328 Ga0105246_10062189
329 Ga0157373_10020590
330 Ga0157373_10031076
331 Ga0157371_10019766
332 Ga0157371_10021538
333 Ga0157371_10129210
334 Ga0157370_10003065
335 Ga0157370_10048780
336 Ga0157369_10033692
337 Ga0157369_10067633
338 Ga0157374_10041848
339 Ga0157378_10046351
340 Ga0163162_10000366
341 Ga0163162_10003374
342 Ga0163162_10061432
343 Ga0157372_10001279
344 Ga0157372_10181288
345 Ga0157372_10379681
346 Ga0157372_10488155
347 Ga0157372_11075414
348 Ga0157375_10076897
349 Ga0157377_10022679
350 Ga0182007_10023858
351 Ga0163161_10013015
352 Ga0163161_10183075
353 Ga0207427_100482
354 Ga0209437_100124
355 Ga0209437_100170
356 Ga0209646_1000045
357 Ga0209026_1000075
358 Ga0209129_1018128
359 Ga0209233_1000266
360 Ga0209455_1005623
361 Ga0209673_1000014
362 Ga0209673_1000018
363 Ga0209676_1000616
364 Ga0209564_1003474
365 Ga0209758_1006266
366 Ga0209050_1000481
367 Ga0207426_1008487
368 Ga0209051_1019758
369 Ga0209257_1000004
370 Ga0209257_1003838
371 Ga0207647_10000116
372 Ga0207647_10051839
373 Ga0207647_10111127
374 Ga0207645_10003546
375 Ga0207654_10001630
376 Ga0207654_10042968
377 Ga0207654_10067112
378 Ga0207654_10480289
379 Ga0207695_10002900
380 Ga0207695_10006255
381 Ga0207695_10006837
382 Ga0207695_10151179
383 Ga0207695_10268139
384 Ga0207671_10004762
385 Ga0207671_10026711
386 Ga0207671_10058847
387 Ga0207671_10168815
388 Ga0207681_10187969
389 Ga0207694_10421916
390 Ga0207694_10435453
391 Ga0207644_10209234
392 Ga0207706_10000007
393 Ga0207704_10000124
394 Ga0207667_10077325
395 Ga0207667_10484608
396 Ga0207651_10107246
397 Ga0207640_10852663
398 Ga0207658_10971514
399 Ga0207677_10167106
400 Ga0207639_10036757
401 Ga0207639_10075606
402 Ga0207639_10240054
403 Ga0207639_10582814
404 Ga0207702_10683252
405 Ga0207648_10003695
406 Ga0207674_10083398
407 Ga0207674_10654033
408 Ga0207683_10021741
409 Ga0207698_10360875
410 Ga0207698_10694696
411 Ga0268266_10000039
412 Ga0268266_10000073
413 Ga0307517_10017796
414 Ga0307517_10020980
415 Ga0307517_10248043
416 Ga0307515_10000172
417 Ga0307515_10000349
418 Ga0307515_10216912
419 Ga0307405_10010846
420 Ga0307412_10080135
421 Ga0307414_10044114
422 Ga0307510_10013796
423 Ga0307510_10058075
424 Ga0466970_0019079
425 Ga0466970_0344564
426 Ga0495638_0012774
427 Ga0495638_0146053
428 Ga0495651_0108312
429 Ga0495650_0058692
430 Ga0495650_0153272
431 Ga0495585_0000057
432 Ga0495607_0260319
433 Ga0495606_0003909
434 Ga0495606_0007306
435 Ga0495606_0012523
436 Ga0495606_0018286
437 Ga0495610_0001711
438 Ga0495631_0304101
439 Ga0495637_0018010
440 Ga0495637_0244411
441 Ga0495648_0029349
442 Ga0495633_0006218
443 Ga0495625_0015714
444 Ga0495625_0028787
445 Ga0495625_0082433
446 Ga0495625_0114751
447 Ga0495649_0061113
448 Ga0495589_0181513
449 Ga0495683_0043840
450 Ga0495687_000040
451 Ga0495687_003027
452 Ga0495687_072836
453 Ga0495686_0000040
454 Ga0495686_0000420
455 Ga0495686_0100300
456 Ga0495686_0314830
457 Ga0495614_0015432
458 Ga0496101_0154513
459 nmdc:mga0k408_1967_c1
460 nmdc:mga0k408_8096_c1
461 Ga0500644_0020812
462 Ga0500646_0004180
463 Ga0500583_0000286
464 Ga0500583_0154704
465 Ga0500641_0039967
466 Ga0500562_000083
467 Ga0500618_000004
468 Ga0500618_002631
469 Ga0500642_0089518
470 Ga0500652_017874
471 Ga0500655_005372
472 Ga0500655_062431
473 Ga0500568_0035475
474 Ga0500588_0045253
475 Ga0500622_0000051
476 Ga0500622_0001220
477 Ga0500627_0337794
478 Ga0500637_0158279
479 2599481237
480 2928081834
481 2928151857
482 2929155854
483 2929241475
484 2932087164

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03729

DUF308

Short repeat of unknown function (DUF308)

111

180

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
8oyx-assembly1.cif.gz_A de novo designed soluble gpcr-like fold glf_18 0.4503 10 187
8oyx-assembly2.cif.gz_B de novo designed soluble gpcr-like fold glf_18 0.4459 10 187
8dwg-assembly1.cif.gz_R cryoem structure of gq-coupled mrgprx1 with peptide ligand bam8-22 and positive allosteric modulator ml382 0.4353 7 179
8oyx-assembly1.cif.gz_A de novo designed soluble gpcr-like fold glf_18 0.4199 10 187
8oyx-assembly2.cif.gz_B de novo designed soluble gpcr-like fold glf_18 0.4179 10 187
ID Description Score Start End Superfamily
af_Q7K3Z2_1_95_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.7324 104 179 1.20.1070.10
af_Q75L87_1_294_1.20.140.150 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3; 0.6973 101 179 1.20.140.150
af_Q9CAL1_34_166_1.20.140.40 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Invertase/pectin methylesterase inhibitor family protein 0.6331 92 191 1.20.140.40
af_A0A0B4KGB5_1_118_1.20.140.150 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3; 0.6249 102 191 1.20.140.150
af_Q7K3Z2_1_95_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.6058 104 179 1.20.1070.10
ID Description Score Start End GO Terms
AF-A0A1G6V5K3-F1-model_v4 DUF308 domain-containing protein 0.9392 11 193 GO:0016020
AF-A0A519Q365-F1-model_v4 deleted 0.9244 13 161
AF-A0A3N1SZ14-F1-model_v4 Integral membrane protein 0.9223 17 189 GO:0016020
AF-A0A7K0CH43-F1-model_v4 Integral membrane protein 0.9108 16 183 GO:0016020
AF-A0A147GZT0-F1-model_v4 deleted 0.9055 18 189

Map