F354733

General Info

Members Datasets Scaffolds Average Seq Length
242 142 484 916

Family's Representative Sequence

Representative Sequence 3300025919|Ga0207657_10044914|Ga0207657_100449142
Length 903
Sequence MKDFSFITSSHPAYIENLYKEFVKNPQNIDPDLRKFFEGFDFAMAGSASKPSANGFSNGTPTIEEKQVLSADSIDWMREIRVYRLILGYRNKGHLLAKTNPIRARKDRGANLDLSFFGLNENDLDKTFEAGNLIGLGATTLRNILNHLQACYASHVGIEFKYISDQKKIDWITNEMEHKFTNPLPIEKKKRILQKLNEGVMFEKFLHTKYIGQKRFSLEGGESTIPALDEIINTAAENSVQEVVIGMAHRGRLNVLANILGKTYEQIFTEFEGNSIPDTTMGSGDVKYHMGYSSEIDTDAGKKVHLKLAPNPSHLEAVDPVVIGFARSKADILYNSDYDKILPILIHGDSSLAGQGIVYEVVQMSGLKGYYTGGTLHFVINNQIGFTTDFDDARTADYCTSIASMIQAPVFHVNGDDVEAVVKVSQIAMCYRQEFNSDIFIDMVCYRKHGHNEGDDPKFTQPGLYAIIEKQPNPREVYVKWLMTNGDDATAELAKEMEKKFWSDLQERLDEIKQHPLPYKYQTPELWWQNLRRATAEDFNSSPITAISKEEVDKLFNAIMNLPEGFKPLKKVQKILSYASILDEQKDVRMSGQDVRRGTFSHRHAVVRDENTDEFYNRLSNISDKQGHFRIYNSLLSEYAVLGFEYGYSMANPNALVIWEAQFGDFANGAQTIIDQFISCSEQKWRRMNGVVLLLPHGYEGQGPEHSSGRMERFLQMCAEFNMVVTNITTAANLFHCFRRQISWPFRKPLINFSPKANLRHPKSHSVIAEFTTGGFKEIIDDASVKDPASITKVLFCSGKIYFDLLEKKENDKRNDVAIVRLEQLYPLPLKQIENLYKKYSKAIWYWIQEEPLNMGAASFLRMNLTSINYGVISRPASAATASGFSKIHAKEQEEILNTAFSI

Samples

Sample ID Description Type Environment
1 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
9 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
10 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
11 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
12 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
13 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
16 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
17 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
18 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
19 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
20 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
21 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
22 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
23 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
24 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
25 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
26 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
27 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
28 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
29 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
30 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
31 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
32 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
33 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
34 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
36 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
37 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
38 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
39 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
40 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
41 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
42 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
43 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
44 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
45 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
46 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
47 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
48 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
49 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
50 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
51 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
52 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
53 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
54 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
55 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
56 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
57 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
58 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
59 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
60 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
61 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
62 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
63 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
94 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
95 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
96 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
97 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
98 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
99 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
100 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
101 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
102 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
103 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
104 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
105 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
106 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
107 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
108 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
109 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
110 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
111 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
112 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
113 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
114 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
115 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
116 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
117 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
118 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
121 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
122 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
123 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
124 3300049766 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_B_4_drought Metagenome Rhizosphere
125 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
126 3300050005 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought Metagenome Rhizosphere
127 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
128 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
129 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
130 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
131 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
132 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
133 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
134 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
135 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere
136 2738541278 Niastella sp. CF465 Isolate Unclassified
137 2818991444 Filimonas endophytica 3197 Isolate Unclassified
138 2818991460 Chitinophaga polysaccharea 1209 Isolate Unclassified
139 2884791551 Chitinophaga oryzae 1310 Isolate Unclassified
140 2914759650 Rhizosphaericola mali Isolate Rhizosphere
141 2929177148 Chitinophaga sp. R-72269 Hybrid assembly Isolate Unclassified
142 2945977869 Chitinophaga sp. W2I13 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.11
Metatranscriptomes 0
Isolates 2.89

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.96
Nodule 0
Rhizoplane 0
Rhizosphere 90.91
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207657_10044914 3300025919 Bacteria 3881
2 SwRhRL2b_contig_1761633 2162886007 Bacteria 195701
3 JGI25160J50197_1011595 3300003354 Bacteria 3113
4 Ga0070658_10004004 3300005327 Bacteria 12069
5 Ga0070683_100068543 3300005329 Bacteria 3306
6 Ga0070670_100031127 3300005331 Bacteria 4595
7 Ga0068869_100020808 3300005334 Bacteria 4504
8 Ga0070666_10001123 3300005335 Bacteria 16300
9 Ga0070666_10009179 3300005335 Bacteria 6164
10 Ga0070666_10011399 3300005335 Bacteria 5576
11 Ga0070682_100000129 3300005337 Bacteria 64098
12 Ga0070682_100004477 3300005337 Bacteria 7761
13 Ga0068868_100002809 3300005338 Bacteria 12066
14 Ga0068868_100017040 3300005338 Bacteria 5406
15 Ga0070660_100001284 3300005339 Bacteria 17110
16 Ga0070660_100020101 3300005339 Bacteria 4903
17 Ga0070660_100032810 3300005339 Bacteria 3911
18 Ga0070689_100044128 3300005340 Bacteria 3429
19 Ga0070661_100001301 3300005344 Bacteria 17525
20 Ga0070675_100030432 3300005354 Bacteria 4359
21 Ga0070659_100002027 3300005366 Bacteria 14487
22 Ga0070659_100020235 3300005366 Bacteria 5052
23 Ga0070678_100033716 3300005456 Bacteria 3558
24 Ga0070681_10023450 3300005458 Bacteria 6206
25 Ga0070681_10043157 3300005458 Bacteria 4518
26 Ga0070681_10075809 3300005458 Bacteria 3323
27 Ga0070698_100011690 3300005471 Bacteria 9311
28 Ga0070679_100000640 3300005530 Bacteria 29746
29 Ga0070679_100048281 3300005530 Bacteria 4241
30 Ga0070684_100004554 3300005535 Bacteria 10564
31 Ga0070684_100017305 3300005535 Bacteria 5913
32 Ga0068853_100012384 3300005539 Bacteria 6939
33 Ga0068853_100014925 3300005539 Bacteria 6381
34 Ga0068853_100017715 3300005539 Bacteria 5878
35 Ga0070665_100000008 3300005548 Bacteria 606341
36 Ga0068855_100008677 3300005563 Bacteria 12284
37 Ga0068855_100014929 3300005563 Bacteria 9358
38 Ga0068855_100019555 3300005563 Bacteria 8134
39 Ga0070664_100005313 3300005564 Bacteria 10331
40 Ga0068854_100042350 3300005578 Bacteria 3222
41 Ga0068856_100004712 3300005614 Bacteria 13540
42 Ga0068852_100003187 3300005616 Bacteria 11456
43 Ga0068852_100006669 3300005616 Bacteria 8368
44 Ga0068852_100042246 3300005616 Bacteria 3859
45 Ga0068859_100000023 3300005617 Bacteria 221914
46 Ga0068859_100006272 3300005617 Bacteria 12062
47 Ga0068863_100004568 3300005841 Bacteria 13649
48 Ga0068863_100006609 3300005841 Bacteria 11382
49 Ga0068863_100010272 3300005841 Bacteria 9097
50 Ga0068863_100030376 3300005841 Bacteria 5161
51 Ga0068858_100003125 3300005842 Bacteria 16572
52 Ga0068860_100000029 3300005843 Bacteria 259192
53 Ga0068860_100009350 3300005843 Bacteria 9738
54 Ga0081539_10000337 3300005985 Bacteria 103868
55 Ga0075366_10021002 3300006195 Bacteria 3794
56 Ga0075366_10034804 3300006195 Bacteria 2968
57 Ga0097621_100000134 3300006237 Bacteria 43683
58 Ga0097621_100021114 3300006237 Bacteria 5029
59 Ga0068871_100000655 3300006358 Bacteria 23806
60 Ga0075431_100003390 3300006847 Bacteria 15444
61 Ga0075431_100053335 3300006847 Bacteria 4169
62 Ga0075429_100018267 3300006880 Bacteria 6072
63 Ga0097620_100000023 3300006931 Bacteria 221914
64 Ga0097620_100006272 3300006931 Bacteria 12062
65 Ga0105240_10000040 3300009093 Bacteria 264634
66 Ga0105240_10000153 3300009093 Bacteria 140973
67 Ga0105240_10005593 3300009093 Bacteria 18674
68 Ga0105240_10016176 3300009093 Bacteria 10111
69 Ga0105240_10029210 3300009093 Bacteria 7190
70 Ga0105240_10126327 3300009093 Bacteria 3073
71 Ga0105240_10134803 3300009093 Bacteria 2958
72 Ga0114129_10044487 3300009147 Bacteria 6246
73 Ga0114129_10045890 3300009147 Bacteria 6141
74 Ga0105241_10004506 3300009174 Bacteria 10307
75 Ga0105241_10005089 3300009174 Bacteria 9696
76 Ga0105248_10002784 3300009177 Bacteria 19436
77 Ga0105237_10001750 3300009545 Bacteria 28065
78 Ga0105237_10028113 3300009545 Bacteria 5730
79 Ga0105237_10028516 3300009545 Bacteria 5684
80 Ga0105238_10006377 3300009551 Bacteria 11735
81 Ga0105249_10003376 3300009553 Bacteria 13827
82 Ga0105249_10030672 3300009553 Bacteria 4861
83 Ga0105249_10040425 3300009553 Bacteria 4236
84 Ga0105239_10000337 3300010375 Bacteria 68698
85 Ga0105239_10000784 3300010375 Bacteria 45049
86 Ga0105239_10006647 3300010375 Bacteria 13383
87 Ga0105239_10022743 3300010375 Bacteria 6911
88 Ga0157373_10002246 3300013100 Bacteria 14628
89 Ga0157373_10003257 3300013100 Bacteria 12273
90 Ga0157373_10015541 3300013100 Bacteria 5563
91 Ga0157371_10001342 3300013102 Bacteria 25912
92 Ga0157371_10004846 3300013102 Bacteria 11576
93 Ga0157371_10012159 3300013102 Bacteria 6594
94 Ga0157370_10001240 3300013104 Bacteria 31893
95 Ga0157370_10001848 3300013104 Bacteria 26098
96 Ga0157370_10006785 3300013104 Bacteria 12559
97 Ga0157369_10010269 3300013105 Bacteria 10682
98 Ga0157369_10031323 3300013105 Bacteria 5856
99 Ga0157369_10066601 3300013105 Bacteria 3874
100 Ga0157374_10000009 3300013296 Bacteria 564330
101 Ga0157374_10010762 3300013296 Bacteria 7886
102 Ga0157378_10001602 3300013297 Bacteria 20452
103 Ga0157378_10019757 3300013297 Bacteria 5924
104 Ga0163162_10000373 3300013306 Bacteria 40682
105 Ga0163162_10000518 3300013306 Bacteria 35823
106 Ga0163162_10003482 3300013306 Bacteria 15044
107 Ga0163162_10004609 3300013306 Bacteria 13283
108 Ga0157372_10085252 3300013307 Bacteria 3583
109 Ga0157372_10085440 3300013307 Bacteria 3578
110 Ga0157375_10000073 3300013308 Bacteria 105972
111 Ga0163163_10000129 3300014325 Bacteria 77897
112 Ga0163163_10005878 3300014325 Bacteria 10673
113 Ga0157377_10010874 3300014745 Bacteria 4520
114 Ga0157377_10012201 3300014745 Bacteria 4315
115 Ga0157379_10008404 3300014968 Bacteria 8973
116 Ga0157376_10000392 3300014969 Bacteria 28423
117 Ga0213876_10006098 3300021384 Bacteria 6584
118 Ga0209130_1001914 3300025284 Bacteria 11716
119 Ga0207426_1000057 3300025302 Bacteria 369548
120 Ga0207680_10000568 3300025903 Bacteria 17460
121 Ga0207647_10003042 3300025904 Bacteria 12604
122 Ga0207647_10004856 3300025904 Bacteria 9943
123 Ga0207705_10007050 3300025909 Bacteria 8290
124 Ga0207705_10009175 3300025909 Bacteria 7205
125 Ga0207705_10040302 3300025909 Bacteria 3349
126 Ga0207654_10002974 3300025911 Bacteria 8594
127 Ga0207654_10012410 3300025911 Bacteria 4366
128 Ga0207707_10017127 3300025912 Bacteria 6314
129 Ga0207695_10000041 3300025913 Bacteria 450902
130 Ga0207695_10000051 3300025913 Bacteria 399641
131 Ga0207695_10004616 3300025913 Bacteria 18682
132 Ga0207695_10016226 3300025913 Bacteria 8730
133 Ga0207695_10020728 3300025913 Bacteria 7521
134 Ga0207695_10096057 3300025913 Bacteria 2966
135 Ga0207671_10002747 3300025914 Bacteria 18376
136 Ga0207671_10008027 3300025914 Bacteria 9031
137 Ga0207671_10041751 3300025914 Bacteria 3395
138 Ga0207657_10005426 3300025919 Bacteria 13325
139 Ga0207657_10010280 3300025919 Bacteria 9342
140 Ga0207657_10035788 3300025919 Bacteria 4448
141 Ga0207649_10028310 3300025920 Bacteria 3298
142 Ga0207652_10000035 3300025921 Bacteria 138263
143 Ga0207652_10000494 3300025921 Bacteria 40156
144 Ga0207652_10017347 3300025921 Bacteria 5891
145 Ga0207652_10073839 3300025921 Bacteria 2968
146 Ga0207650_10011395 3300025925 Bacteria 6120
147 Ga0207706_10006926 3300025933 Bacteria 10483
148 Ga0207686_10000202 3300025934 Bacteria 45854
149 Ga0207669_10012294 3300025937 Bacteria 4204
150 Ga0207691_10018842 3300025940 Bacteria 6536
151 Ga0207689_10004910 3300025942 Bacteria 12046
152 Ga0207661_10018630 3300025944 Bacteria 5159
153 Ga0207679_10019006 3300025945 Bacteria 4612
154 Ga0207679_10021545 3300025945 Bacteria 4372
155 Ga0207667_10001727 3300025949 Bacteria 27517
156 Ga0207667_10003867 3300025949 Bacteria 18426
157 Ga0207667_10044264 3300025949 Bacteria 4718
158 Ga0207712_10011024 3300025961 Bacteria 5756
159 Ga0207677_10007184 3300026023 Bacteria 6137
160 Ga0207639_10017093 3300026041 Bacteria 5140
161 Ga0207639_10019035 3300026041 Bacteria 4889
162 Ga0207678_10005656 3300026067 Bacteria 11172
163 Ga0207702_10049454 3300026078 Bacteria 3548
164 Ga0207641_10000377 3300026088 Bacteria 53065
165 Ga0207641_10002072 3300026088 Bacteria 19005
166 Ga0207641_10006648 3300026088 Bacteria 9708
167 Ga0207648_10016180 3300026089 Bacteria 6826
168 Ga0207648_10029445 3300026089 Bacteria 4869
169 Ga0207676_10009696 3300026095 Bacteria 6847
170 Ga0207676_10022202 3300026095 Bacteria 4666
171 Ga0207683_10036071 3300026121 Bacteria 4303
172 Ga0207698_10004220 3300026142 Bacteria 8741
173 Ga0207698_10011156 3300026142 Bacteria 5812
174 Ga0268266_10000016 3300028379 Bacteria 629101
175 Ga0268264_10000072 3300028381 Bacteria 260791
176 Ga0268264_10009079 3300028381 Bacteria 8245
177 Ga0307515_10000001 3300028794 Bacteria 4259510
178 Ga0307515_10000057 3300028794 Bacteria 261695
179 Ga0265327_10000181 3300031251 Bacteria 134324
180 Ga0265327_10000421 3300031251 Bacteria 77515
181 Ga0307510_10000042 3300033180 Bacteria 100951
182 Ga0395899_0009156 3300037312 Bacteria 7606
183 Ga0395900_0000203 3300037418 Bacteria 93536
184 Ga0395900_0016594 3300037418 Bacteria 7510
185 Ga0395900_0063718 3300037418 Bacteria 3789
186 Ga0395898_0001285 3300037466 Bacteria 36916
187 Ga0395905_0009192 3300037471 Bacteria 9676
188 Ga0395901_0002230 3300038443 Bacteria 19784
189 Ga0395901_0004241 3300038443 Bacteria 14460
190 Ga0436365_1175436 3300039437 Bacteria 21748
191 Ga0439457_000422 3300042014 Bacteria 12155
192 Ga0439434_0003577 3300042435 Bacteria 4539
193 Ga0466969_0000754 3300044656 Bacteria 17561
194 Ga0466972_0000003 3300044658 Bacteria 391452
195 Ga0466972_0010674 3300044658 Bacteria 4608
196 Ga0466966_0000030 3300044684 Bacteria 103300
197 Ga0466970_0001361 3300044765 Bacteria 11790
198 Ga0466957_0001468 3300044842 Bacteria 12359
199 Ga0466959_0000201 3300045049 Bacteria 39074
200 Ga0495606_0009135 3300046507 Bacteria 8442
201 Ga0495648_0001526 3300046524 Bacteria 22643
202 Ga0495668_0000106 3300046616 Bacteria 133476
203 Ga0495668_0000138 3300046616 Bacteria 109654
204 Ga0495611_0000011 3300046648 Bacteria 146643
205 Ga0495687_000004 3300047443 Bacteria 779298
206 Ga0495686_0000165 3300047472 Bacteria 125611
207 Ga0495686_0004984 3300047472 Bacteria 10680
208 Ga0501032_0001176 3300049569 Bacteria 20991
209 Ga0501034_0000115 3300049571 Bacteria 146825
210 Ga0501034_0010726 3300049571 Bacteria 9516
211 Ga0501034_0034558 3300049571 Bacteria 5125
212 Ga0501034_0070247 3300049571 Bacteria 3513
213 Ga0501043_0006412 3300049579 Bacteria 9450
214 Ga0501046_0032090 3300049580 Bacteria 4254
215 Ga0501070_0050930 3300049586 Bacteria 3437
216 Ga0501073_0003647 3300049589 Bacteria 11578
217 Ga0501080_0088770 3300049742 Bacteria 2872
218 Ga0501083_0008625 3300049744 Bacteria 7193
219 Ga0501269_000778 3300049766 Bacteria 5068
220 Ga0501044_0010154 3300049823 Bacteria 10234
221 Ga0501044_0019502 3300049823 Bacteria 7252
222 Ga0501044_0044837 3300049823 Bacteria 4586
223 Ga0501044_0103801 3300049823 Bacteria 2857
224 Ga0501284_00073 3300050005 Bacteria 28647
225 nmdc:mga05p37_46579_c1 3300050507 Bacteria 5331
226 nmdc:mga05p37_68787_c1 3300050507 Bacteria 4354
227 nmdc:mga09592_10516_c1 3300050508 Bacteria 7528
228 nmdc:mga06r32_11613_c1 3300050510 Bacteria 7929
229 Ga0500583_0001403 3300053092 Bacteria 6900
230 Ga0500562_000055 3300053108 Bacteria 58655
231 Ga0500642_0001469 3300053130 Bacteria 6784
232 Ga0500616_0001186 3300053153 Bacteria 26499
233 Ga0500622_0002707 3300053156 Bacteria 12545
234 Ga0500622_0002792 3300053156 Bacteria 12270
235 Ga0500611_000013 3300053727 Bacteria 135447
236 2738731481 2738541278 Bacteria 9755573
237 2819586700 2818991444 Bacteria 6968812
238 2819677856 2818991460 Bacteria 7595395
239 2884797810 2884791551 Bacteria 8511252
240 2914762888 2914759650 Bacteria 4701441
241 2929183138 2929177148 Bacteria 7883697
242 2945979097 2945977869 Bacteria 7777518
243 Ga0207657_10044914
244 SwRhRL2b_contig_1761633
245 JGI25160J50197_1011595
246 Ga0070658_10004004
247 Ga0070683_100068543
248 Ga0070670_100031127
249 Ga0068869_100020808
250 Ga0070666_10001123
251 Ga0070666_10009179
252 Ga0070666_10011399
253 Ga0070682_100000129
254 Ga0070682_100004477
255 Ga0068868_100002809
256 Ga0068868_100017040
257 Ga0070660_100001284
258 Ga0070660_100020101
259 Ga0070660_100032810
260 Ga0070689_100044128
261 Ga0070661_100001301
262 Ga0070675_100030432
263 Ga0070659_100002027
264 Ga0070659_100020235
265 Ga0070678_100033716
266 Ga0070681_10023450
267 Ga0070681_10043157
268 Ga0070681_10075809
269 Ga0070698_100011690
270 Ga0070679_100000640
271 Ga0070679_100048281
272 Ga0070684_100004554
273 Ga0070684_100017305
274 Ga0068853_100012384
275 Ga0068853_100014925
276 Ga0068853_100017715
277 Ga0070665_100000008
278 Ga0068855_100008677
279 Ga0068855_100014929
280 Ga0068855_100019555
281 Ga0070664_100005313
282 Ga0068854_100042350
283 Ga0068856_100004712
284 Ga0068852_100003187
285 Ga0068852_100006669
286 Ga0068852_100042246
287 Ga0068859_100000023
288 Ga0068859_100006272
289 Ga0068863_100004568
290 Ga0068863_100006609
291 Ga0068863_100010272
292 Ga0068863_100030376
293 Ga0068858_100003125
294 Ga0068860_100000029
295 Ga0068860_100009350
296 Ga0081539_10000337
297 Ga0075366_10021002
298 Ga0075366_10034804
299 Ga0097621_100000134
300 Ga0097621_100021114
301 Ga0068871_100000655
302 Ga0075431_100003390
303 Ga0075431_100053335
304 Ga0075429_100018267
305 Ga0097620_100000023
306 Ga0097620_100006272
307 Ga0105240_10000040
308 Ga0105240_10000153
309 Ga0105240_10005593
310 Ga0105240_10016176
311 Ga0105240_10029210
312 Ga0105240_10126327
313 Ga0105240_10134803
314 Ga0114129_10044487
315 Ga0114129_10045890
316 Ga0105241_10004506
317 Ga0105241_10005089
318 Ga0105248_10002784
319 Ga0105237_10001750
320 Ga0105237_10028113
321 Ga0105237_10028516
322 Ga0105238_10006377
323 Ga0105249_10003376
324 Ga0105249_10030672
325 Ga0105249_10040425
326 Ga0105239_10000337
327 Ga0105239_10000784
328 Ga0105239_10006647
329 Ga0105239_10022743
330 Ga0157373_10002246
331 Ga0157373_10003257
332 Ga0157373_10015541
333 Ga0157371_10001342
334 Ga0157371_10004846
335 Ga0157371_10012159
336 Ga0157370_10001240
337 Ga0157370_10001848
338 Ga0157370_10006785
339 Ga0157369_10010269
340 Ga0157369_10031323
341 Ga0157369_10066601
342 Ga0157374_10000009
343 Ga0157374_10010762
344 Ga0157378_10001602
345 Ga0157378_10019757
346 Ga0163162_10000373
347 Ga0163162_10000518
348 Ga0163162_10003482
349 Ga0163162_10004609
350 Ga0157372_10085252
351 Ga0157372_10085440
352 Ga0157375_10000073
353 Ga0163163_10000129
354 Ga0163163_10005878
355 Ga0157377_10010874
356 Ga0157377_10012201
357 Ga0157379_10008404
358 Ga0157376_10000392
359 Ga0213876_10006098
360 Ga0209130_1001914
361 Ga0207426_1000057
362 Ga0207680_10000568
363 Ga0207647_10003042
364 Ga0207647_10004856
365 Ga0207705_10007050
366 Ga0207705_10009175
367 Ga0207705_10040302
368 Ga0207654_10002974
369 Ga0207654_10012410
370 Ga0207707_10017127
371 Ga0207695_10000041
372 Ga0207695_10000051
373 Ga0207695_10004616
374 Ga0207695_10016226
375 Ga0207695_10020728
376 Ga0207695_10096057
377 Ga0207671_10002747
378 Ga0207671_10008027
379 Ga0207671_10041751
380 Ga0207657_10005426
381 Ga0207657_10010280
382 Ga0207657_10035788
383 Ga0207649_10028310
384 Ga0207652_10000035
385 Ga0207652_10000494
386 Ga0207652_10017347
387 Ga0207652_10073839
388 Ga0207650_10011395
389 Ga0207706_10006926
390 Ga0207686_10000202
391 Ga0207669_10012294
392 Ga0207691_10018842
393 Ga0207689_10004910
394 Ga0207661_10018630
395 Ga0207679_10019006
396 Ga0207679_10021545
397 Ga0207667_10001727
398 Ga0207667_10003867
399 Ga0207667_10044264
400 Ga0207712_10011024
401 Ga0207677_10007184
402 Ga0207639_10017093
403 Ga0207639_10019035
404 Ga0207678_10005656
405 Ga0207702_10049454
406 Ga0207641_10000377
407 Ga0207641_10002072
408 Ga0207641_10006648
409 Ga0207648_10016180
410 Ga0207648_10029445
411 Ga0207676_10009696
412 Ga0207676_10022202
413 Ga0207683_10036071
414 Ga0207698_10004220
415 Ga0207698_10011156
416 Ga0268266_10000016
417 Ga0268264_10000072
418 Ga0268264_10009079
419 Ga0307515_10000001
420 Ga0307515_10000057
421 Ga0265327_10000181
422 Ga0265327_10000421
423 Ga0307510_10000042
424 Ga0395899_0009156
425 Ga0395900_0000203
426 Ga0395900_0016594
427 Ga0395900_0063718
428 Ga0395898_0001285
429 Ga0395905_0009192
430 Ga0395901_0002230
431 Ga0395901_0004241
432 Ga0436365_1175436
433 Ga0439457_000422
434 Ga0439434_0003577
435 Ga0466969_0000754
436 Ga0466972_0000003
437 Ga0466972_0010674
438 Ga0466966_0000030
439 Ga0466970_0001361
440 Ga0466957_0001468
441 Ga0466959_0000201
442 Ga0495606_0009135
443 Ga0495648_0001526
444 Ga0495668_0000106
445 Ga0495668_0000138
446 Ga0495611_0000011
447 Ga0495687_000004
448 Ga0495686_0000165
449 Ga0495686_0004984
450 Ga0501032_0001176
451 Ga0501034_0000115
452 Ga0501034_0010726
453 Ga0501034_0034558
454 Ga0501034_0070247
455 Ga0501043_0006412
456 Ga0501046_0032090
457 Ga0501070_0050930
458 Ga0501073_0003647
459 Ga0501080_0088770
460 Ga0501083_0008625
461 Ga0501269_000778
462 Ga0501044_0010154
463 Ga0501044_0019502
464 Ga0501044_0044837
465 Ga0501044_0103801
466 Ga0501284_00073
467 nmdc:mga05p37_46579_c1
468 nmdc:mga05p37_68787_c1
469 nmdc:mga09592_10516_c1
470 nmdc:mga06r32_11613_c1
471 Ga0500583_0001403
472 Ga0500562_000055
473 Ga0500642_0001469
474 Ga0500616_0001186
475 Ga0500622_0002707
476 Ga0500622_0002792
477 Ga0500611_000013
478 2738731481
479 2819586700
480 2819677856
481 2884797810
482 2914762888
483 2929183138
484 2945979097

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02779

Transket_pyr

Transketolase, pyrimidine binding domain

575

762

0.98

PF16078

2-oxogl_dehyd_N

2-oxoglutarate dehydrogenase N-terminus

4

44

0.96

PF16870

OxoGdeHyase_C

2-oxoglutarate dehydrogenase C-terminal

765

901

0.95

PF00676

E1_dh

Dehydrogenase E1 component

194

520

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
2jgd-assembly1.cif.gz_A e. coli 2-oxoglutarate dehydrogenase (e1o) 0.9329 69 919
6km9-assembly1.cif.gz_B crystal structure of suca from vibrio vulnificus 0.9325 71 918
2jgd-assembly1.cif.gz_A e. coli 2-oxoglutarate dehydrogenase (e1o) 0.9307 69 919
6km9-assembly1.cif.gz_B crystal structure of suca from vibrio vulnificus 0.9304 71 918
6kma-assembly1.cif.gz_B crystal structure of suca with glycolaldehyde-1-13c from vibrio vulnificus 0.9262 71 918
ID Description Score Start End Superfamily
af_O74378_600_867_3.40.50.12470 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9295 539 786 3.40.50.12470
2jgdB03 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9172 521 792 3.40.50.12470
2jgdB03 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.91 521 792 3.40.50.12470
2xt6B04 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain 0.9056 794 917 3.40.50.11610
2jgdA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.9009 150 500 3.40.50.970
ID Description Score Start End GO Terms
AF-A0A4Q3SDR4-F1-model_v4 oxoglutarate dehydrogenase (succinyl-transferring) (EC 1.2.4.2) 0.9618 535 918 GO:0004591
GO:0005829
GO:0006099
GO:0030976
GO:0045252
AF-A0A4Q3SDR4-F1-model_v4 oxoglutarate dehydrogenase (succinyl-transferring) (EC 1.2.4.2) 0.9593 535 918 GO:0004591
GO:0005829
GO:0006099
GO:0030976
GO:0045252
AF-A0A838EZI8-F1-model_v4 oxoglutarate dehydrogenase (succinyl-transferring) (EC 1.2.4.2) 0.9574 144 921 GO:0004591
GO:0005829
GO:0006099
GO:0030976
GO:0045252
AF-A0A838EZI8-F1-model_v4 oxoglutarate dehydrogenase (succinyl-transferring) (EC 1.2.4.2) 0.9526 144 921 GO:0004591
GO:0005829
GO:0006099
GO:0030976
GO:0045252
AF-A0A4S0IGE5-F1-model_v4 deleted 0.9519 744 875

Map