F354840

General Info

Members Datasets Scaffolds Average Seq Length
242 182 484 257

Family's Representative Sequence

Representative Sequence 3300035121|Ga0373960_0017525|Ga0373960_0017525_427_1290
Length 287
Sequence MSIASSRKFREDETMSHTLRVTILGCGSSGGVPRATGDWGACDPTEPRNRRSRCSVLVQQWQGAAGEAKQATTVLIDTSPDLRSQLAEVKPAHIDAVLFTHDHADQTHGIDDLRAFVLQSRRRMPIWMDAPTRKTLVPRFDYCFHGVAAYPSILELAGELKPDEYVSVEGPGGPIAFLPLEQDHGMSRSLGFRFGPCAYSNDLVGMPERSFAALNELGLWIVDALREKPHPTHAHLDMTLEWIARLGPQRAVLTNMHIDLDYRTLTETLPAGVAPGFDGFSADFAIP

Samples

Sample ID Description Type Environment
1 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
2 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
3 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
4 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
5 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
11 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
12 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
13 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
14 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
15 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
20 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
21 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
22 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
23 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
24 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
25 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
26 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
27 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
28 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
29 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
30 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
31 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
32 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
33 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
34 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
35 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
36 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
37 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
38 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
39 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
40 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
41 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
42 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
43 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
44 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
45 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
46 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
47 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
48 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
49 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
50 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
51 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
52 3300015690 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_D05 Metagenome Rhizosphere
53 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
54 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
55 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
56 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
57 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
58 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
59 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
60 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
88 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
91 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
92 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
93 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
94 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
95 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
96 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
97 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
98 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
99 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
100 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
101 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
102 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
103 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
104 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
105 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
106 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
107 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
108 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
109 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
110 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
111 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
112 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
113 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
114 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
115 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
116 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
117 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
118 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
119 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
120 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
121 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
122 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
123 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
124 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
125 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
126 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
127 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
128 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
129 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
130 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
131 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
132 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
133 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
134 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
135 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
136 3300049530 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
137 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
138 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
140 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
141 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
142 3300049664 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_A_2_drought Metagenome Rhizosphere
143 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
144 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
145 3300049707 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_B_2_drought Metagenome Rhizosphere
146 3300049853 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought Metagenome Rhizosphere
147 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
148 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
149 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
150 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
151 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
152 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
153 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
154 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
155 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
156 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
157 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
158 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
159 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
160 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
161 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
162 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
163 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
164 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
165 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
166 3300053724 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 endosphere Metagenome Endosphere
167 2582581305 Rhizorhabdus wittichii YR128 Isolate Rhizosphere
168 2643221574 Brevundimonas sp. Root608 Isolate Unclassified
169 2643221663 Brevundimonas sp. Root1279 Isolate Unclassified
170 2643221699 Brevundimonas sp. Root1423 Isolate Unclassified
171 2808606401 Sphingobium sp. AEW010 Isolate Rhizosphere
172 2808606404 Sphingobium sp. AEW013 Isolate Rhizosphere
173 2808606405 Sphingobium sp. AEW001 Isolate Rhizosphere
174 2830075706 Sphingomonas jinjuensis DSM 21457 Isolate Rhizosphere
175 2880518877 Sphingobium sp. JAI105 Isolate Rhizosphere
176 2928027323 Sphingomonas sp. 1185 Isolate Unclassified
177 2928972540 Brevundimonas sp. 1080 Isolate Rhizosphere
178 2939669807 Kaistia defluvii 3207 Isolate Rhizosphere
179 2984555340 Sphingomonas sp. SORGH_AS789 Isolate Aerial Root
180 2984564862 Sphingomonas sp. SORGH_AS870 Isolate Aerial Root
181 2993356040 Sphingomonas sp. SORGH_AS742 Isolate Aerial Root
182 8057101203 Sphingomonas lycopersici MMSM20 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 92.56
Metatranscriptomes 0.41
Isolates 7.02

Biome Distribution

Category Percentage (%)
Aerial Root 1.24
Bulb 0
Endosphere 15.29
Nodule 0
Rhizoplane 1.65
Rhizosphere 69.83
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0373960_0017525 3300035121 Bacteria 1857
2 JGI24739J22299_10004153 3300001989 Bacteria 5540
3 JGI25165J46597_1000032 3300003214 Bacteria 294371
4 Ga0055536_1000631 3300003781 Bacteria 23947
5 Ga0055531_10020760 3300003794 Bacteria 2582
6 Ga0070683_100457497 3300005329 Bacteria 1218
7 Ga0070670_100000051 3300005331 Bacteria 131351
8 Ga0068869_100208723 3300005334 Bacteria 1543
9 Ga0068868_100332554 3300005338 Bacteria 1297
10 Ga0070671_100002373 3300005355 Bacteria 14545
11 Ga0070673_100607242 3300005364 Bacteria 998
12 Ga0070659_100488897 3300005366 Bacteria 1048
13 Ga0070667_100000045 3300005367 Bacteria 164821
14 Ga0070667_100000418 3300005367 Bacteria 45252
15 Ga0070709_10025016 3300005434 Bacteria 3522
16 Ga0070662_100028241 3300005457 Bacteria 3902
17 Ga0070662_100141570 3300005457 Bacteria 1864
18 Ga0070681_10348075 3300005458 Bacteria 1392
19 Ga0068867_100293636 3300005459 Bacteria 1337
20 Ga0070679_100134960 3300005530 Bacteria 2449
21 Ga0068853_100033204 3300005539 Bacteria 4377
22 Ga0068853_100061857 3300005539 Bacteria 3239
23 Ga0070665_100610328 3300005548 Bacteria 1104
24 Ga0068855_100000416 3300005563 Bacteria 52868
25 Ga0068855_100158879 3300005563 Bacteria 2567
26 Ga0068857_100280124 3300005577 Bacteria 1534
27 Ga0068854_100052430 3300005578 Bacteria 2925
28 Ga0068864_100000004 3300005618 Bacteria 489341
29 Ga0068864_100004563 3300005618 Bacteria 11370
30 Ga0068864_100595904 3300005618 Bacteria 1072
31 Ga0068863_100000002 3300005841 Bacteria 489510
32 Ga0068863_100006375 3300005841 Bacteria 11573
33 Ga0068858_100013431 3300005842 Bacteria 7728
34 Ga0068860_100000073 3300005843 Bacteria 173235
35 Ga0068862_100000002 3300005844 Bacteria 489341
36 Ga0068862_100121618 3300005844 Bacteria 2301
37 Ga0081539_10049895 3300005985 Bacteria 2371
38 Ga0075368_10000447 3300006042 Bacteria 12179
39 Ga0075367_10000022 3300006178 Bacteria 33901
40 Ga0105251_10000318 3300009011 Bacteria 48256
41 Ga0105240_10031203 3300009093 Bacteria 6914
42 Ga0105247_10028449 3300009101 Bacteria 3382
43 Ga0105243_10326678 3300009148 Bacteria 1400
44 Ga0105241_10239386 3300009174 Bacteria 1533
45 Ga0105242_10837149 3300009176 Bacteria 914
46 Ga0105248_10000010 3300009177 Bacteria 344314
47 Ga0105248_10019975 3300009177 Bacteria 7417
48 Ga0105248_10126846 3300009177 Bacteria 2878
49 Ga0105237_10072145 3300009545 Bacteria 3446
50 Ga0105238_10025636 3300009551 Bacteria 6010
51 Ga0105238_10040380 3300009551 Bacteria 4728
52 Ga0105238_10147225 3300009551 Bacteria 2331
53 Ga0105238_10205729 3300009551 Bacteria 1944
54 Ga0105249_10000041 3300009553 Bacteria 195999
55 Ga0105249_10446408 3300009553 Bacteria 1331
56 Ga0105239_10127638 3300010375 Bacteria 2828
57 Ga0105239_10379818 3300010375 Bacteria 1597
58 Ga0157370_10024851 3300013104 Bacteria 5932
59 Ga0157369_10161983 3300013105 Bacteria 2361
60 Ga0157369_10193727 3300013105 Bacteria 2135
61 Ga0157374_10485345 3300013296 Bacteria 1239
62 Ga0157378_10087185 3300013297 Bacteria 2831
63 Ga0163162_10008409 3300013306 Bacteria 10065
64 Ga0163162_10060670 3300013306 Bacteria 3818
65 Ga0163162_10489099 3300013306 Bacteria 1362
66 Ga0163163_10093042 3300014325 Bacteria 3031
67 Ga0163163_10233465 3300014325 Bacteria 1889
68 Ga0157380_10018818 3300014326 Bacteria 5136
69 Ga0157379_10010017 3300014968 Bacteria 8259
70 Ga0182005_1008507 3300015265 Bacteria 3022
71 Ga0183363_1001 3300015690 Bacteria 611534
72 Ga0213876_10279942 3300021384 Bacteria 887
73 Ga0213875_10000504 3300021388 Bacteria 32687
74 Ga0209233_1000066 3300025261 Bacteria 381218
75 Ga0209455_1012339 3300025272 Bacteria 2050
76 Ga0209676_1000061 3300025292 Bacteria 332674
77 Ga0209676_1001017 3300025292 Bacteria 32725
78 Ga0209025_1055855 3300025294 Bacteria 1523
79 Ga0209050_1026640 3300025298 Bacteria 1928
80 Ga0209257_1007903 3300025304 Bacteria 6252
81 Ga0207713_1002500 3300025735 Bacteria 13337
82 Ga0207680_10013365 3300025903 Bacteria 4215
83 Ga0207695_10066506 3300025913 Bacteria 3701
84 Ga0207671_10160347 3300025914 Bacteria 1741
85 Ga0207671_10318739 3300025914 Bacteria 1230
86 Ga0207652_10189788 3300025921 Bacteria 1848
87 Ga0207681_10089191 3300025923 Bacteria 2198
88 Ga0207694_10050856 3300025924 Bacteria 3211
89 Ga0207694_10071114 3300025924 Bacteria 2718
90 Ga0207694_10455883 3300025924 Bacteria 1068
91 Ga0207650_10000083 3300025925 Bacteria 127270
92 Ga0207687_10000565 3300025927 Bacteria 24994
93 Ga0207644_10001836 3300025931 Bacteria 13803
94 Ga0207706_10101565 3300025933 Bacteria 2530
95 Ga0207706_10192853 3300025933 Bacteria 1788
96 Ga0207709_10208934 3300025935 Bacteria 1399
97 Ga0207711_10000035 3300025941 Bacteria 177223
98 Ga0207689_10228551 3300025942 Bacteria 1538
99 Ga0207667_10000504 3300025949 Bacteria 51526
100 Ga0207667_10226922 3300025949 Bacteria 1913
101 Ga0207712_10000338 3300025961 Bacteria 42597
102 Ga0207712_10330071 3300025961 Bacteria 1261
103 Ga0207668_10002141 3300025972 Bacteria 11516
104 Ga0207640_10051461 3300025981 Bacteria 2678
105 Ga0207658_10000025 3300025986 Bacteria 182470
106 Ga0207658_10000575 3300025986 Bacteria 33049
107 Ga0207658_10089959 3300025986 Bacteria 2378
108 Ga0207703_10000501 3300026035 Bacteria 40495
109 Ga0207703_10000677 3300026035 Bacteria 33813
110 Ga0207639_10006232 3300026041 Bacteria 8103
111 Ga0207639_10016133 3300026041 Bacteria 5278
112 Ga0207708_10117760 3300026075 Bacteria 2068
113 Ga0207641_10000002 3300026088 Bacteria 981004
114 Ga0207641_10014017 3300026088 Bacteria 6571
115 Ga0207676_10000005 3300026095 Bacteria 698744
116 Ga0207676_10003307 3300026095 Bacteria 11443
117 Ga0207674_10075866 3300026116 Bacteria 3371
118 Ga0207698_10336326 3300026142 Bacteria 1420
119 Ga0209813_10000056 3300027866 Bacteria 45704
120 Ga0268265_10000003 3300028380 Bacteria 949201
121 Ga0268264_10000120 3300028381 Bacteria 191138
122 Ga0307517_10074550 3300028786 Bacteria 2991
123 Ga0265331_10048359 3300031250 Bacteria 2045
124 Ga0307513_10167517 3300031456 Bacteria 2079
125 Ga0307508_10000638 3300031616 Bacteria 42145
126 Ga0307406_10054293 3300031901 Bacteria 2556
127 Ga0307412_10000339 3300031911 Bacteria 29443
128 Ga0307412_10095908 3300031911 Bacteria 2086
129 Ga0307412_10158677 3300031911 Bacteria 1678
130 Ga0307412_10162648 3300031911 Bacteria 1660
131 Ga0307412_10224077 3300031911 Bacteria 1443
132 Ga0307409_100392524 3300031995 Bacteria 1323
133 Ga0307416_100373286 3300032002 Bacteria 1453
134 Ga0307416_100393426 3300032002 Bacteria 1421
135 Ga0307414_10000102 3300032004 Bacteria 61667
136 Ga0307414_10034313 3300032004 Bacteria 3362
137 Ga0307414_10138277 3300032004 Bacteria 1903
138 Ga0307414_10189310 3300032004 Bacteria 1663
139 Ga0307414_10220939 3300032004 Bacteria 1555
140 Ga0307414_10246001 3300032004 Bacteria 1483
141 Ga0307411_10352527 3300032005 Bacteria 1200
142 Ga0307510_10002311 3300033180 Bacteria 21551
143 Ga0373939_0108193 3300035114 Bacteria 964
144 Ga0373933_0044496 3300035724 Bacteria 2630
145 Ga0373947_0139421 3300035725 Bacteria 1554
146 Ga0436364_0139430 3300037853 Bacteria 61613
147 Ga0436365_0795137 3300039437 Bacteria 2769
148 Ga0439455_0000759 3300042012 Bacteria 4837
149 Ga0495590_0048752 3300046457 Bacteria 1478
150 Ga0495638_0001486 3300046460 Bacteria 21191
151 Ga0495585_0154185 3300046492 Bacteria 1196
152 Ga0495583_0007191 3300046506 Bacteria 7069
153 Ga0495643_0038552 3300046522 Bacteria 2617
154 Ga0495648_0034527 3300046524 Bacteria 3290
155 Ga0495663_0014645 3300046525 Bacteria 2200
156 Ga0495654_0034881 3300046530 Bacteria 2536
157 Ga0495622_0024872 3300046557 Bacteria 2796
158 Ga0495668_0066104 3300046616 Bacteria 1990
159 Ga0495668_0092525 3300046616 Bacteria 1656
160 Ga0495611_0018637 3300046648 Bacteria 2978
161 Ga0495625_0000570 3300046660 Bacteria 54000
162 Ga0495625_0007888 3300046660 Bacteria 9166
163 Ga0495625_0117852 3300046660 Bacteria 1809
164 Ga0495625_0182804 3300046660 Bacteria 1393
165 Ga0495669_0205480 3300046684 Bacteria 942
166 Ga0495670_0142600 3300046691 Bacteria 1253
167 Ga0495649_0018396 3300046694 Bacteria 3932
168 Ga0495686_0000007 3300047472 Bacteria 732622
169 Ga0495626_0024650 3300048091 Bacteria 2948
170 Ga0496102_0000043 3300048905 Bacteria 189201
171 Ga0496103_0000086 3300048906 Bacteria 104765
172 Ga0496103_0037877 3300048906 Bacteria 2957
173 Ga0496114_0287536 3300048917 Bacteria 1450
174 Ga0496116_0004500 3300048919 Bacteria 13274
175 Ga0496116_0027611 3300048919 Bacteria 4130
176 Ga0496117_0000104 3300048920 Bacteria 189201
177 Ga0496117_0010634 3300048920 Bacteria 8346
178 Ga0496118_0000080 3300048921 Bacteria 189201
179 Ga0496118_0000525 3300048921 Bacteria 62968
180 Ga0496118_0000807 3300048921 Bacteria 50003
181 Ga0496118_0014590 3300048921 Bacteria 7345
182 Ga0496118_0218921 3300048921 Bacteria 1110
183 Ga0496119_0076038 3300048922 Bacteria 1949
184 Ga0496121_0000681 3300048924 Bacteria 63345
185 Ga0496121_0149819 3300048924 Bacteria 1718
186 Ga0496122_0014548 3300048925 Bacteria 7597
187 Ga0496123_0000539 3300048926 Bacteria 65166
188 Ga0496124_0000093 3300048927 Bacteria 189201
189 Ga0496125_0010456 3300048928 Bacteria 9385
190 Ga0501314_010817 3300049530 Bacteria 854
191 Ga0501039_0199550 3300049575 Bacteria 1573
192 Ga0501042_0178728 3300049578 Bacteria 1531
193 Ga0501071_0237400 3300049587 Bacteria 1374
194 Ga0501076_0393953 3300049592 Bacteria 1139
195 Ga0501223_000127 3300049663 Bacteria 21837
196 Ga0501224_000043 3300049664 Bacteria 21738
197 Ga0501233_001061 3300049668 Bacteria 4662
198 Ga0501225_0000535 3300049705 Bacteria 11884
199 Ga0501234_012835 3300049707 Bacteria 1313
200 Ga0501226_000138 3300049853 Bacteria 14112
201 nmdc:mga06z11_7_c1 3300050494 Bacteria 121804
202 nmdc:mga04h51_42_c1 3300050495 Bacteria 42897
203 nmdc:mga07m45_16892_c1 3300050496 Bacteria 3911
204 Ga0495619_0275105 3300053085 Bacteria 1167
205 Ga0500643_000129 3300053087 Bacteria 77787
206 Ga0500643_015859 3300053087 Bacteria 2571
207 Ga0500647_0011361 3300053091 Bacteria 3973
208 Ga0500651_0006743 3300053093 Bacteria 6650
209 Ga0500651_0006926 3300053093 Bacteria 6574
210 Ga0500642_0002525 3300053130 Bacteria 5389
211 Ga0500655_000064 3300053133 Bacteria 28878
212 Ga0500658_0000375 3300053134 Bacteria 19648
213 Ga0500559_0016095 3300053136 Bacteria 3158
214 Ga0500559_0036361 3300053136 Bacteria 2129
215 Ga0500559_0039325 3300053136 Bacteria 2057
216 Ga0500559_0203645 3300053136 Bacteria 933
217 Ga0500568_0026395 3300053139 Bacteria 2439
218 Ga0500577_0028126 3300053142 Bacteria 1934
219 Ga0500590_000703 3300053148 Bacteria 12148
220 Ga0500604_0010589 3300053151 Bacteria 2469
221 Ga0500622_0007025 3300053156 Bacteria 6440
222 Ga0500627_0000387 3300053158 Bacteria 11893
223 Ga0500639_023920 3300053163 Bacteria 3229
224 Ga0500637_0004420 3300053178 Bacteria 6669
225 Ga0500570_020294 3300053724 Bacteria 3710
226 2585263880 2582581305 Bacteria 4895574
227 2643883332 2643221574 Bacteria 2789653
228 2644351958 2643221663 Bacteria 3425771
229 2644547583 2643221699 Bacteria 5731501
230 2644547849 2643221699 Bacteria 5731501
231 2809063625 2808606401 Bacteria 4586670
232 2809079757 2808606404 Bacteria 4652788
233 2809084122 2808606405 Bacteria 4586632
234 2830077663 2830075706 Bacteria 3855215
235 2880519512 2880518877 Bacteria 5012590
236 2928027371 2928027323 Bacteria 4382488
237 2928974816 2928972540 Bacteria 3058286
238 2939670817 2939669807 Bacteria 5028511
239 2984558327 2984555340 Bacteria 4247089
240 2984567292 2984564862 Bacteria 4339992
241 2993358359 2993356040 Bacteria 4247105
242 8057103253 8057101203 Bacteria 5034064
243 Ga0373960_0017525
244 JGI24739J22299_10004153
245 JGI25165J46597_1000032
246 Ga0055536_1000631
247 Ga0055531_10020760
248 Ga0070683_100457497
249 Ga0070670_100000051
250 Ga0068869_100208723
251 Ga0068868_100332554
252 Ga0070671_100002373
253 Ga0070673_100607242
254 Ga0070659_100488897
255 Ga0070667_100000045
256 Ga0070667_100000418
257 Ga0070709_10025016
258 Ga0070662_100028241
259 Ga0070662_100141570
260 Ga0070681_10348075
261 Ga0068867_100293636
262 Ga0070679_100134960
263 Ga0068853_100033204
264 Ga0068853_100061857
265 Ga0070665_100610328
266 Ga0068855_100000416
267 Ga0068855_100158879
268 Ga0068857_100280124
269 Ga0068854_100052430
270 Ga0068864_100000004
271 Ga0068864_100004563
272 Ga0068864_100595904
273 Ga0068863_100000002
274 Ga0068863_100006375
275 Ga0068858_100013431
276 Ga0068860_100000073
277 Ga0068862_100000002
278 Ga0068862_100121618
279 Ga0081539_10049895
280 Ga0075368_10000447
281 Ga0075367_10000022
282 Ga0105251_10000318
283 Ga0105240_10031203
284 Ga0105247_10028449
285 Ga0105243_10326678
286 Ga0105241_10239386
287 Ga0105242_10837149
288 Ga0105248_10000010
289 Ga0105248_10019975
290 Ga0105248_10126846
291 Ga0105237_10072145
292 Ga0105238_10025636
293 Ga0105238_10040380
294 Ga0105238_10147225
295 Ga0105238_10205729
296 Ga0105249_10000041
297 Ga0105249_10446408
298 Ga0105239_10127638
299 Ga0105239_10379818
300 Ga0157370_10024851
301 Ga0157369_10161983
302 Ga0157369_10193727
303 Ga0157374_10485345
304 Ga0157378_10087185
305 Ga0163162_10008409
306 Ga0163162_10060670
307 Ga0163162_10489099
308 Ga0163163_10093042
309 Ga0163163_10233465
310 Ga0157380_10018818
311 Ga0157379_10010017
312 Ga0182005_1008507
313 Ga0183363_1001
314 Ga0213876_10279942
315 Ga0213875_10000504
316 Ga0209233_1000066
317 Ga0209455_1012339
318 Ga0209676_1000061
319 Ga0209676_1001017
320 Ga0209025_1055855
321 Ga0209050_1026640
322 Ga0209257_1007903
323 Ga0207713_1002500
324 Ga0207680_10013365
325 Ga0207695_10066506
326 Ga0207671_10160347
327 Ga0207671_10318739
328 Ga0207652_10189788
329 Ga0207681_10089191
330 Ga0207694_10050856
331 Ga0207694_10071114
332 Ga0207694_10455883
333 Ga0207650_10000083
334 Ga0207687_10000565
335 Ga0207644_10001836
336 Ga0207706_10101565
337 Ga0207706_10192853
338 Ga0207709_10208934
339 Ga0207711_10000035
340 Ga0207689_10228551
341 Ga0207667_10000504
342 Ga0207667_10226922
343 Ga0207712_10000338
344 Ga0207712_10330071
345 Ga0207668_10002141
346 Ga0207640_10051461
347 Ga0207658_10000025
348 Ga0207658_10000575
349 Ga0207658_10089959
350 Ga0207703_10000501
351 Ga0207703_10000677
352 Ga0207639_10006232
353 Ga0207639_10016133
354 Ga0207708_10117760
355 Ga0207641_10000002
356 Ga0207641_10014017
357 Ga0207676_10000005
358 Ga0207676_10003307
359 Ga0207674_10075866
360 Ga0207698_10336326
361 Ga0209813_10000056
362 Ga0268265_10000003
363 Ga0268264_10000120
364 Ga0307517_10074550
365 Ga0265331_10048359
366 Ga0307513_10167517
367 Ga0307508_10000638
368 Ga0307406_10054293
369 Ga0307412_10000339
370 Ga0307412_10095908
371 Ga0307412_10158677
372 Ga0307412_10162648
373 Ga0307412_10224077
374 Ga0307409_100392524
375 Ga0307416_100373286
376 Ga0307416_100393426
377 Ga0307414_10000102
378 Ga0307414_10034313
379 Ga0307414_10138277
380 Ga0307414_10189310
381 Ga0307414_10220939
382 Ga0307414_10246001
383 Ga0307411_10352527
384 Ga0307510_10002311
385 Ga0373939_0108193
386 Ga0373933_0044496
387 Ga0373947_0139421
388 Ga0436364_0139430
389 Ga0436365_0795137
390 Ga0439455_0000759
391 Ga0495590_0048752
392 Ga0495638_0001486
393 Ga0495585_0154185
394 Ga0495583_0007191
395 Ga0495643_0038552
396 Ga0495648_0034527
397 Ga0495663_0014645
398 Ga0495654_0034881
399 Ga0495622_0024872
400 Ga0495668_0066104
401 Ga0495668_0092525
402 Ga0495611_0018637
403 Ga0495625_0000570
404 Ga0495625_0007888
405 Ga0495625_0117852
406 Ga0495625_0182804
407 Ga0495669_0205480
408 Ga0495670_0142600
409 Ga0495649_0018396
410 Ga0495686_0000007
411 Ga0495626_0024650
412 Ga0496102_0000043
413 Ga0496103_0000086
414 Ga0496103_0037877
415 Ga0496114_0287536
416 Ga0496116_0004500
417 Ga0496116_0027611
418 Ga0496117_0000104
419 Ga0496117_0010634
420 Ga0496118_0000080
421 Ga0496118_0000525
422 Ga0496118_0000807
423 Ga0496118_0014590
424 Ga0496118_0218921
425 Ga0496119_0076038
426 Ga0496121_0000681
427 Ga0496121_0149819
428 Ga0496122_0014548
429 Ga0496123_0000539
430 Ga0496124_0000093
431 Ga0496125_0010456
432 Ga0501314_010817
433 Ga0501039_0199550
434 Ga0501042_0178728
435 Ga0501071_0237400
436 Ga0501076_0393953
437 Ga0501223_000127
438 Ga0501224_000043
439 Ga0501233_001061
440 Ga0501225_0000535
441 Ga0501234_012835
442 Ga0501226_000138
443 nmdc:mga06z11_7_c1
444 nmdc:mga04h51_42_c1
445 nmdc:mga07m45_16892_c1
446 Ga0495619_0275105
447 Ga0500643_000129
448 Ga0500643_015859
449 Ga0500647_0011361
450 Ga0500651_0006743
451 Ga0500651_0006926
452 Ga0500642_0002525
453 Ga0500655_000064
454 Ga0500658_0000375
455 Ga0500559_0016095
456 Ga0500559_0036361
457 Ga0500559_0039325
458 Ga0500559_0203645
459 Ga0500568_0026395
460 Ga0500577_0028126
461 Ga0500590_000703
462 Ga0500604_0010589
463 Ga0500622_0007025
464 Ga0500627_0000387
465 Ga0500639_023920
466 Ga0500637_0004420
467 Ga0500570_020294
468 2585263880
469 2643883332
470 2644351958
471 2644547583
472 2644547849
473 2809063625
474 2809079757
475 2809084122
476 2830077663
477 2880519512
478 2928027371
479 2928974816
480 2939670817
481 2984558327
482 2984567292
483 2993358359
484 8057103253

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12706

Lactamase_B_2

Beta-lactamase superfamily domain

72

258

0.91

PF00753

Lactamase_B

Metallo-beta-lactamase superfamily

67

223

0.65

Structural Annotation

Top 5 Hits

ID Description Score Start End
6b9v-assembly1.cif.gz_A crystal structure of a new diphosphatase from the phnp family 0.9433 2 251
3qh8-assembly1.cif.gz_A crystal structure of a beta-lactamase-like protein bound to amp from brucella melitensis, long wavelength synchrotron data 0.9415 2 254
3qh8-assembly1.cif.gz_A crystal structure of a beta-lactamase-like protein bound to amp from brucella melitensis, long wavelength synchrotron data 0.9342 2 254
6b9v-assembly1.cif.gz_B crystal structure of a new diphosphatase from the phnp family 0.9306 2 254
6b9v-assembly1.cif.gz_B crystal structure of a new diphosphatase from the phnp family 0.9057 2 254
ID Description Score Start End Superfamily
3py6A00 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.9422 2 254 3.60.15.10
3py6A00 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.935 2 254 3.60.15.10
af_O74545_3_299_3.60.15.10 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.896 2 253 3.60.15.10
af_I1K3H5_2_307_3.60.15.10 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.8867 2 254 3.60.15.10
af_O74545_3_299_3.60.15.10 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.8859 2 253 3.60.15.10
ID Description Score Start End GO Terms
AF-A0A520IMV3-F1-model_v4 MBL fold metallo-hydrolase 0.9978 1 138 GO:0016787
AF-A0A520HQX3-F1-model_v4 MBL fold metallo-hydrolase 0.9966 1 118 GO:0016787
AF-A0A4Q3CD66-F1-model_v4 MBL fold metallo-hydrolase 0.9932 99 253 GO:0016787
AF-A0A2W5EPR2-F1-model_v4 deleted 0.9932 1 97
AF-A0A2N3DX35-F1-model_v4 MBL fold metallo-hydrolase 0.9919 1 77 GO:0016787

Map