F354869

General Info

Members Datasets Scaffolds Average Seq Length
242 152 474 494

Family's Representative Sequence

Representative Sequence 3300037471|Ga0395905_0098486|Ga0395905_0098486_503_2227
Length 561
Sequence VATNIASQTLDKTREINRVDPELQATTGRVFGAWAVRAQFRANLTLVSLAAPPNFAILAQRRWGSSMSFGLAAAAAPAWADEPVKVDPAKDKADKEKPELPPFPADASVKQVIHLAGKTVNYTATVGSLPVRDEKGKKIAEVVFTAYVVDGPRDPNRPVTFAFNGGPGAASVYLNMGAIGPKRIQFGAQGDSASDPVRLIDNAGAWLDFTDLVFIDPVGTGYSRSLVDQDETKKHFFQVKEDVAYLSRIVFDWLVKNGRMASPKYVVGESYGGYRAPAIAHYLQTELGVGPSGVVMVSPFLDARTQAFEDISPLPYIVALPSMAAANYERQGKPLNAQALAEVEQYARTEFALDLLKGRKDQAAVDRVVEHVTRYTGLDPALVRRMGGRVDTGAFLRELYRKDGKLASVYDSNVTTWDPYPWSQEQRAGDPILDAIIAPTTSAMVDFVTRTVGWKVEGRYNALSNAVGEAWEKNWFTQVESVSDLRKAAAADPKMKVMIVHGYDDLSCPFFASQLIVDQMPPMGDSNRVQLRLYPGGHMFYSRPDSQAAFRHDVMALYGSR

Samples

Sample ID Description Type Environment
1 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
2 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
3 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
4 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
5 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
6 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
7 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
8 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
11 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
12 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
13 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
14 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
15 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
16 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
17 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
20 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
21 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
22 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
23 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
24 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
25 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
26 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
27 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
28 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
29 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
30 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
31 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
32 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
33 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
34 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
35 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
36 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
37 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
38 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
39 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
40 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
41 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
42 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
43 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
44 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
45 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
46 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
47 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
48 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
49 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
50 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
51 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
53 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
79 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
80 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
81 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
82 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
83 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
84 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
85 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
86 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
87 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
88 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
89 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
90 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
91 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
92 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
93 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
94 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
95 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
96 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
97 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
98 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
99 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
100 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
101 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
102 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
103 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
104 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
105 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
106 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
107 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
108 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
109 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
110 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
111 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
112 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
113 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
114 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
115 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
116 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
117 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
118 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
119 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
120 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
121 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
122 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
123 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
124 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
125 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
126 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
127 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
128 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
129 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
130 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
132 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
133 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
134 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
136 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
137 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
138 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
139 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
140 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
141 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
142 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
143 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
144 2582581279 Caulobacter henricii OK261 Isolate Rhizosphere
145 2791355048 Caulobacter flavus CGMCC1 15093 Isolate Rhizosphere
146 2818991438 Novosphingobium barchaimii 1192 Isolate Unclassified
147 2843744320 Caulobacter flavus RHGG3 Isolate Unclassified
148 2849560528 Caulobacter zeae 410 Isolate Unclassified
149 2849573788 Caulobacter endophyticus 774 Isolate Unclassified
150 2851153111 Caulobacter radicis 736 Isolate Unclassified
151 2884960567 Caulobacter sp. 602-1 Isolate Rhizosphere
152 2898329390 Caulobacter sp. 602-2 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.28
Metatranscriptomes 0
Isolates 3.72

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.57
Nodule 0
Rhizoplane 5.79
Rhizosphere 68.18
Stem 0
Stem Tuber 0
Unclassified 0.41

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0395905_0098486 3300037471 Bacteria 2746
2 JGI24741J21665_1004701 3300001915 Bacteria 2974
3 JGI24741J21665_1008534 3300001915 Bacteria 1927
4 JGI24740J21852_10000088 3300001979 Bacteria 31765
5 Ga0055525_1000026 3300003759 Bacteria 345798
6 Ga0055536_1000210 3300003781 Bacteria 47869
7 Ga0055530_10000451 3300003791 Bacteria 36535
8 Ga0055530_10013338 3300003791 Bacteria 2811
9 Ga0065165_1000307 3300005262 Bacteria 80513
10 Ga0070658_10000349 3300005327 Bacteria 40022
11 Ga0070680_100000289 3300005336 Bacteria 33586
12 Ga0070682_100007812 3300005337 Bacteria 6020
13 Ga0070660_100001117 3300005339 Bacteria 18089
14 Ga0070660_100005714 3300005339 Bacteria 8612
15 Ga0070660_100018565 3300005339 Bacteria 5084
16 Ga0070691_10001618 3300005341 Bacteria 9752
17 Ga0070692_10001446 3300005345 Bacteria 8623
18 Ga0070671_100013747 3300005355 Bacteria 6529
19 Ga0070671_100025869 3300005355 Bacteria 4818
20 Ga0070659_100001532 3300005366 Bacteria 16675
21 Ga0070667_100000141 3300005367 Bacteria 91504
22 Ga0070681_10000186 3300005458 Bacteria 47903
23 Ga0070681_10001805 3300005458 Bacteria 19258
24 Ga0070681_10032126 3300005458 Bacteria 5268
25 Ga0070679_100000209 3300005530 Bacteria 47903
26 Ga0070679_100185326 3300005530 Bacteria 2052
27 Ga0070684_100186712 3300005535 Bacteria 1885
28 Ga0068853_100000105 3300005539 Bacteria 56438
29 Ga0070696_100006524 3300005546 Bacteria 7791
30 Ga0070693_100014310 3300005547 Bacteria 4062
31 Ga0070665_100000176 3300005548 Bacteria 113398
32 Ga0070665_100000810 3300005548 Bacteria 40895
33 Ga0068855_100016393 3300005563 Bacteria 8908
34 Ga0068855_100122187 3300005563 Bacteria 2980
35 Ga0068855_100303619 3300005563 Bacteria 1767
36 Ga0070664_100035217 3300005564 Bacteria 4202
37 Ga0068854_100000022 3300005578 Bacteria 127908
38 Ga0068854_100008664 3300005578 Bacteria 6548
39 Ga0068856_100037755 3300005614 Bacteria 4740
40 Ga0068864_100014029 3300005618 Bacteria 6645
41 Ga0068864_100127265 3300005618 Bacteria 2284
42 Ga0068851_10010199 3300005834 Bacteria 4379
43 Ga0068863_100022177 3300005841 Bacteria 6062
44 Ga0068860_100000275 3300005843 Bacteria 75059
45 Ga0068871_100014225 3300006358 Bacteria 5926
46 Ga0068865_100001677 3300006881 Bacteria 12969
47 Ga0105240_10007466 3300009093 Bacteria 15868
48 Ga0105240_10061712 3300009093 Bacteria 4670
49 Ga0105241_10042344 3300009174 Bacteria 3444
50 Ga0105238_10012750 3300009551 Bacteria 8486
51 Ga0105239_10040507 3300010375 Bacteria 5104
52 Ga0157370_10129993 3300013104 Bacteria 2349
53 Ga0157369_10096361 3300013105 Bacteria 3156
54 Ga0157374_10003368 3300013296 Bacteria 13425
55 Ga0163162_10052815 3300013306 Bacteria 4083
56 Ga0157376_10130969 3300014969 Bacteria 2238
57 Ga0213872_10000458 3300021361 Bacteria 33281
58 Ga0213872_10020276 3300021361 Bacteria 3063
59 Ga0213872_10052527 3300021361 Bacteria 1849
60 Ga0213875_10000313 3300021388 Bacteria 46302
61 Ga0213875_10012256 3300021388 Bacteria 4241
62 Ga0213875_10022090 3300021388 Bacteria 3045
63 Ga0209563_100005 3300025230 Bacteria 1774893
64 Ga0209026_1003186 3300025250 Bacteria 5558
65 Ga0209676_1000230 3300025292 Bacteria 121783
66 Ga0209758_1001239 3300025297 Bacteria 31794
67 Ga0209050_1000031 3300025298 Bacteria 458181
68 Ga0209050_1000233 3300025298 Bacteria 121806
69 Ga0209050_1000262 3300025298 Bacteria 112798
70 Ga0209256_1009103 3300025299 Bacteria 4425
71 Ga0209051_1002281 3300025303 Bacteria 14016
72 Ga0209257_1000073 3300025304 Bacteria 325833
73 Ga0207656_10009684 3300025321 Bacteria 3581
74 Ga0207647_10008202 3300025904 Bacteria 7504
75 Ga0207705_10000143 3300025909 Bacteria 76756
76 Ga0207705_10000146 3300025909 Bacteria 75353
77 Ga0207705_10052728 3300025909 Bacteria 2929
78 Ga0207707_10000168 3300025912 Bacteria 68834
79 Ga0207707_10000215 3300025912 Bacteria 61846
80 Ga0207695_10008587 3300025913 Bacteria 12763
81 Ga0207695_10011423 3300025913 Bacteria 10761
82 Ga0207695_10017537 3300025913 Bacteria 8327
83 Ga0207695_10023920 3300025913 Bacteria 6892
84 Ga0207695_10124105 3300025913 Bacteria 2547
85 Ga0207671_10091788 3300025914 Bacteria 2289
86 Ga0207660_10000227 3300025917 Bacteria 36209
87 Ga0207660_10068828 3300025917 Bacteria 2568
88 Ga0207657_10003355 3300025919 Bacteria 17130
89 Ga0207657_10011601 3300025919 Bacteria 8740
90 Ga0207649_10030860 3300025920 Bacteria 3179
91 Ga0207652_10000158 3300025921 Bacteria 73781
92 Ga0207652_10015422 3300025921 Bacteria 6208
93 Ga0207644_10013621 3300025931 Bacteria 5426
94 Ga0207690_10010012 3300025932 Bacteria 5631
95 Ga0207690_10010571 3300025932 Bacteria 5492
96 Ga0207690_10040596 3300025932 Bacteria 3043
97 Ga0207690_10050579 3300025932 Bacteria 2775
98 Ga0207704_10000796 3300025938 Bacteria 13941
99 Ga0207711_10000434 3300025941 Bacteria 43493
100 Ga0207661_10081534 3300025944 Bacteria 2672
101 Ga0207679_10154256 3300025945 Bacteria 1873
102 Ga0207667_10000493 3300025949 Bacteria 52083
103 Ga0207667_10006694 3300025949 Bacteria 13931
104 Ga0207667_10021799 3300025949 Bacteria 7091
105 Ga0207667_10037907 3300025949 Bacteria 5151
106 Ga0207667_10050262 3300025949 Bacteria 4399
107 Ga0207640_10000030 3300025981 Bacteria 127918
108 Ga0207640_10002355 3300025981 Bacteria 10138
109 Ga0207658_10000018 3300025986 Bacteria 213853
110 Ga0207639_10000363 3300026041 Bacteria 31350
111 Ga0207639_10002348 3300026041 Bacteria 12718
112 Ga0207639_10028170 3300026041 Bacteria 4100
113 Ga0207641_10038234 3300026088 Bacteria 4011
114 Ga0207676_10109501 3300026095 Bacteria 2308
115 Ga0207698_10014307 3300026142 Bacteria 5270
116 Ga0268266_10000002 3300028379 Bacteria 3059047
117 Ga0268266_10000005 3300028379 Bacteria 1448194
118 Ga0268264_10000256 3300028381 Bacteria 97088
119 Ga0265326_10008492 3300028558 Bacteria 3096
120 Ga0265334_10025847 3300028573 Bacteria 2375
121 Ga0307517_10002279 3300028786 Bacteria 30952
122 Ga0307515_10012916 3300028794 Bacteria 15663
123 Ga0307511_10006678 3300030521 Bacteria 11626
124 Ga0307513_10000615 3300031456 Bacteria 50932
125 Ga0307513_10018992 3300031456 Bacteria 8196
126 Ga0307510_10085053 3300033180 Bacteria 3042
127 Ga0373944_0006542 3300035089 Bacteria 3095
128 Ga0373936_0006421 3300035113 Bacteria 4433
129 Ga0395899_0000013 3300037312 Bacteria 510397
130 Ga0395899_0107711 3300037312 Bacteria 2005
131 Ga0395899_0240873 3300037312 Bacteria 1245
132 Ga0395900_0000010 3300037418 Bacteria 461364
133 Ga0395900_0037338 3300037418 Bacteria 5010
134 Ga0395900_0044706 3300037418 Bacteria 4562
135 Ga0395898_0008303 3300037466 Bacteria 10977
136 Ga0395898_0081877 3300037466 Bacteria 3112
137 Ga0395905_0053964 3300037471 Bacteria 3761
138 Ga0395905_0068767 3300037471 Bacteria 3317
139 Ga0395905_0099757 3300037471 Bacteria 2727
140 Ga0395905_0136076 3300037471 Bacteria 2311
141 Ga0436364_0004552 3300037853 Bacteria 8454
142 Ga0436364_0591329 3300037853 Bacteria 1641
143 Ga0436364_0880534 3300037853 Bacteria 127762
144 Ga0436364_1237721 3300037853 Bacteria 9833
145 Ga0395901_0000007 3300038443 Bacteria 497408
146 Ga0395901_0004007 3300038443 Bacteria 14832
147 Ga0436365_0769386 3300039437 Bacteria 2935
148 Ga0436365_1499741 3300039437 Bacteria 2045
149 Ga0436361_0143535 3300039447 Bacteria 7982
150 Ga0436361_0420292 3300039447 Bacteria 49111
151 Ga0436361_0760324 3300039447 Bacteria 3486
152 Ga0436361_0799233 3300039447 Bacteria 3745
153 Ga0436361_1205782 3300039447 Bacteria 2176
154 Ga0466966_0055444 3300044684 Bacteria 2508
155 Ga0466958_0071865 3300045836 Unclassified 2119
156 Ga0495590_0001026 3300046457 Bacteria 12292
157 Ga0495638_0000441 3300046460 Bacteria 50064
158 Ga0495638_0033268 3300046460 Bacteria 3298
159 Ga0495638_0090661 3300046460 Bacteria 1842
160 Ga0495650_0030178 3300046471 Bacteria 2459
161 Ga0495596_0000267 3300046500 Bacteria 34545
162 Ga0495583_0000027 3300046506 Bacteria 256299
163 Ga0495583_0022324 3300046506 Bacteria 3231
164 Ga0495606_0017664 3300046507 Bacteria 5383
165 Ga0495606_0034825 3300046507 Bacteria 3451
166 Ga0495610_0000425 3300046512 Bacteria 43379
167 Ga0495631_0000959 3300046518 Bacteria 17978
168 Ga0495648_0002487 3300046524 Bacteria 16922
169 Ga0495645_0030992 3300046543 Bacteria 3896
170 Ga0495668_0000141 3300046616 Bacteria 108840
171 Ga0495625_0018912 3300046660 Bacteria 5362
172 Ga0495670_0024888 3300046691 Bacteria 2959
173 Ga0495673_0000467 3300047469 Bacteria 43912
174 Ga0495673_0043536 3300047469 Bacteria 2009
175 Ga0495686_0000063 3300047472 Bacteria 228575
176 Ga0495686_0000100 3300047472 Bacteria 180492
177 Ga0495686_0000864 3300047472 Bacteria 38828
178 Ga0495686_0002067 3300047472 Bacteria 19738
179 Ga0495686_0006189 3300047472 Bacteria 9239
180 Ga0495686_0015846 3300047472 Bacteria 5128
181 Ga0495626_0000808 3300048091 Bacteria 28273
182 Ga0496102_0037712 3300048905 Bacteria 4361
183 Ga0496102_0056729 3300048905 Bacteria 3574
184 Ga0496104_0025617 3300048907 Bacteria 5438
185 Ga0496104_0185994 3300048907 Bacteria 1988
186 Ga0496105_0012780 3300048908 Bacteria 6651
187 Ga0496108_0004463 3300048911 Bacteria 11263
188 Ga0496109_0000927 3300048912 Bacteria 24306
189 Ga0496111_0027179 3300048914 Bacteria 4045
190 Ga0496112_0003142 3300048915 Bacteria 13556
191 Ga0496112_0010290 3300048915 Bacteria 8481
192 Ga0496112_0094760 3300048915 Bacteria 2956
193 Ga0496115_0000037 3300048918 Bacteria 126108
194 Ga0496115_0017117 3300048918 Bacteria 5531
195 Ga0496115_0098689 3300048918 Bacteria 2392
196 Ga0496116_0000062 3300048919 Bacteria 271104
197 Ga0496117_0027098 3300048920 Bacteria 4471
198 Ga0496117_0033687 3300048920 Bacteria 3870
199 Ga0496118_0101810 3300048921 Bacteria 1938
200 Ga0496119_0019789 3300048922 Bacteria 4937
201 Ga0496121_0003389 3300048924 Bacteria 22816
202 Ga0496122_0003021 3300048925 Bacteria 22822
203 Ga0496122_0006914 3300048925 Bacteria 12819
204 Ga0496124_0001874 3300048927 Bacteria 28945
205 Ga0496124_0021090 3300048927 Bacteria 6008
206 Ga0496124_0023366 3300048927 Bacteria 5644
207 Ga0496125_0068459 3300048928 Bacteria 2792
208 Ga0496126_0000112 3300048929 Bacteria 192755
209 Ga0496126_0015237 3300048929 Bacteria 7740
210 Ga0495678_002097 3300049459 Bacteria 14144
211 Ga0501034_0152576 3300049571 Bacteria 2286
212 Ga0501069_0002940 3300049585 Bacteria 8754
213 Ga0501070_0001797 3300049586 Bacteria 18924
214 Ga0501070_0064636 3300049586 Bacteria 3029
215 Ga0501080_0042330 3300049742 Bacteria 4241
216 Ga0501035_0040586 3300049822 Bacteria 4204
217 Ga0501044_0007186 3300049823 Bacteria 12246
218 Ga0501044_0053940 3300049823 Bacteria 4134
219 Ga0500578_0000077 3300053086 Bacteria 108269
220 Ga0500643_000770 3300053087 Bacteria 20931
221 Ga0500643_004787 3300053087 Bacteria 5989
222 Ga0500644_0000513 3300053088 Bacteria 16530
223 Ga0500555_000426 3300053103 Bacteria 17551
224 Ga0500594_0000214 3300053118 Bacteria 14182
225 Ga0500595_006532 3300053119 Bacteria 4935
226 Ga0500595_014414 3300053119 Bacteria 2999
227 Ga0500564_000293 3300053138 Bacteria 13900
228 Ga0500622_0005043 3300053156 Bacteria 8040
229 2585148809 2582581279 Bacteria 4980720
230 2792461787 2791355048 Bacteria 5832535
231 2819554724 2818991438 Bacteria 5793701
232 2843745851 2843744320 Bacteria 5659202
233 2849562236 2849560528 Bacteria 5393480
234 2849577157 2849573788 Bacteria 5421256
235 2851156903 2851153111 Bacteria 5542585
236 2884961310 2884960567 Bacteria 5437054
237 2898331167 2898329390 Bacteria 5168154
238 Ga0395905_0098486
239 JGI24741J21665_1004701
240 JGI24741J21665_1008534
241 JGI24740J21852_10000088
242 Ga0055525_1000026
243 Ga0055536_1000210
244 Ga0055530_10000451
245 Ga0055530_10013338
246 Ga0065165_1000307
247 Ga0070658_10000349
248 Ga0070680_100000289
249 Ga0070682_100007812
250 Ga0070660_100001117
251 Ga0070660_100005714
252 Ga0070660_100018565
253 Ga0070691_10001618
254 Ga0070692_10001446
255 Ga0070671_100013747
256 Ga0070671_100025869
257 Ga0070659_100001532
258 Ga0070667_100000141
259 Ga0070681_10000186
260 Ga0070681_10001805
261 Ga0070681_10032126
262 Ga0070679_100000209
263 Ga0070679_100185326
264 Ga0070684_100186712
265 Ga0068853_100000105
266 Ga0070696_100006524
267 Ga0070693_100014310
268 Ga0070665_100000176
269 Ga0070665_100000810
270 Ga0068855_100016393
271 Ga0068855_100122187
272 Ga0068855_100303619
273 Ga0070664_100035217
274 Ga0068854_100000022
275 Ga0068854_100008664
276 Ga0068856_100037755
277 Ga0068864_100014029
278 Ga0068864_100127265
279 Ga0068851_10010199
280 Ga0068863_100022177
281 Ga0068860_100000275
282 Ga0068871_100014225
283 Ga0068865_100001677
284 Ga0105240_10007466
285 Ga0105240_10061712
286 Ga0105241_10042344
287 Ga0105238_10012750
288 Ga0105239_10040507
289 Ga0157370_10129993
290 Ga0157369_10096361
291 Ga0157374_10003368
292 Ga0163162_10052815
293 Ga0157376_10130969
294 Ga0213872_10000458
295 Ga0213872_10020276
296 Ga0213872_10052527
297 Ga0213875_10000313
298 Ga0213875_10012256
299 Ga0213875_10022090
300 Ga0209563_100005
301 Ga0209026_1003186
302 Ga0209676_1000230
303 Ga0209758_1001239
304 Ga0209050_1000031
305 Ga0209050_1000233
306 Ga0209050_1000262
307 Ga0209256_1009103
308 Ga0209051_1002281
309 Ga0209257_1000073
310 Ga0207656_10009684
311 Ga0207647_10008202
312 Ga0207705_10000143
313 Ga0207705_10000146
314 Ga0207705_10052728
315 Ga0207707_10000168
316 Ga0207707_10000215
317 Ga0207695_10008587
318 Ga0207695_10011423
319 Ga0207695_10017537
320 Ga0207695_10023920
321 Ga0207695_10124105
322 Ga0207671_10091788
323 Ga0207660_10000227
324 Ga0207660_10068828
325 Ga0207657_10003355
326 Ga0207657_10011601
327 Ga0207649_10030860
328 Ga0207652_10000158
329 Ga0207652_10015422
330 Ga0207644_10013621
331 Ga0207690_10010012
332 Ga0207690_10010571
333 Ga0207690_10040596
334 Ga0207690_10050579
335 Ga0207704_10000796
336 Ga0207711_10000434
337 Ga0207661_10081534
338 Ga0207679_10154256
339 Ga0207667_10000493
340 Ga0207667_10006694
341 Ga0207667_10021799
342 Ga0207667_10037907
343 Ga0207667_10050262
344 Ga0207640_10000030
345 Ga0207640_10002355
346 Ga0207658_10000018
347 Ga0207639_10000363
348 Ga0207639_10002348
349 Ga0207639_10028170
350 Ga0207641_10038234
351 Ga0207676_10109501
352 Ga0207698_10014307
353 Ga0268266_10000002
354 Ga0268266_10000005
355 Ga0268264_10000256
356 Ga0265326_10008492
357 Ga0265334_10025847
358 Ga0307517_10002279
359 Ga0307515_10012916
360 Ga0307511_10006678
361 Ga0307513_10000615
362 Ga0307513_10018992
363 Ga0307510_10085053
364 Ga0373944_0006542
365 Ga0373936_0006421
366 Ga0395899_0000013
367 Ga0395899_0107711
368 Ga0395899_0240873
369 Ga0395900_0000010
370 Ga0395900_0037338
371 Ga0395900_0044706
372 Ga0395898_0008303
373 Ga0395898_0081877
374 Ga0395905_0053964
375 Ga0395905_0068767
376 Ga0395905_0099757
377 Ga0395905_0136076
378 Ga0436364_0004552
379 Ga0436364_0591329
380 Ga0436364_0880534
381 Ga0436364_1237721
382 Ga0395901_0000007
383 Ga0395901_0004007
384 Ga0436365_0769386
385 Ga0436365_1499741
386 Ga0436361_0143535
387 Ga0436361_0420292
388 Ga0436361_0760324
389 Ga0436361_0799233
390 Ga0436361_1205782
391 Ga0466966_0055444
392 Ga0466958_0071865
393 Ga0495590_0001026
394 Ga0495638_0000441
395 Ga0495638_0033268
396 Ga0495638_0090661
397 Ga0495650_0030178
398 Ga0495596_0000267
399 Ga0495583_0000027
400 Ga0495583_0022324
401 Ga0495606_0017664
402 Ga0495606_0034825
403 Ga0495610_0000425
404 Ga0495631_0000959
405 Ga0495648_0002487
406 Ga0495645_0030992
407 Ga0495668_0000141
408 Ga0495625_0018912
409 Ga0495670_0024888
410 Ga0495673_0000467
411 Ga0495673_0043536
412 Ga0495686_0000063
413 Ga0495686_0000100
414 Ga0495686_0000864
415 Ga0495686_0002067
416 Ga0495686_0006189
417 Ga0495686_0015846
418 Ga0495626_0000808
419 Ga0496102_0037712
420 Ga0496102_0056729
421 Ga0496104_0025617
422 Ga0496104_0185994
423 Ga0496105_0012780
424 Ga0496108_0004463
425 Ga0496109_0000927
426 Ga0496111_0027179
427 Ga0496112_0003142
428 Ga0496112_0010290
429 Ga0496112_0094760
430 Ga0496115_0000037
431 Ga0496115_0017117
432 Ga0496115_0098689
433 Ga0496116_0000062
434 Ga0496117_0027098
435 Ga0496117_0033687
436 Ga0496118_0101810
437 Ga0496119_0019789
438 Ga0496121_0003389
439 Ga0496122_0003021
440 Ga0496122_0006914
441 Ga0496124_0001874
442 Ga0496124_0021090
443 Ga0496124_0023366
444 Ga0496125_0068459
445 Ga0496126_0000112
446 Ga0496126_0015237
447 Ga0495678_002097
448 Ga0501034_0152576
449 Ga0501069_0002940
450 Ga0501070_0001797
451 Ga0501070_0064636
452 Ga0501080_0042330
453 Ga0501035_0040586
454 Ga0501044_0007186
455 Ga0501044_0053940
456 Ga0500578_0000077
457 Ga0500643_000770
458 Ga0500643_004787
459 Ga0500644_0000513
460 Ga0500555_000426
461 Ga0500594_0000214
462 Ga0500595_006532
463 Ga0500595_014414
464 Ga0500564_000293
465 Ga0500622_0005043
466 2585148809
467 2792461787
468 2819554724
469 2843745851
470 2849562236
471 2849577157
472 2851156903
473 2884961310
474 2898331167

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00450

Peptidase_S10

Serine carboxypeptidase

117

348

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
4az0-assembly1.cif.gz_A crystal structure of cathepsin a, complexed with 8a. 0.7632 63 268
1uza-assembly2.cif.gz_B crystallographic structure of a feruloyl esterase from aspergillus niger 0.7453 184 237
7cy3-assembly2.cif.gz_B crystal structure of a biodegradable plastic-degrading cutinase from paraphoma sp. b47-9. 0.7435 177 236
6wia-assembly1.cif.gz_A-2 crystal structure of human protective protein/cathepsin a, dfp-inhibited (aged) 0.7093 63 491
4mws-assembly1.cif.gz_A crystal structure of human ppca (trigonal crystal form 1) 0.6975 63 491
ID Description Score Start End Superfamily
af_A0A1D6H7X8_88_267_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.7937 67 228 3.40.50.1820
af_A0A0P0Y283_5_173_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.7788 65 226 3.40.50.1820
af_A0A1D6GDT4_134_361_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.7725 179 237 3.40.50.1820
af_Q9P2N6_264_445_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.7717 178 243 3.40.50.1820
af_O13934_145_398_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.7479 181 243 3.40.50.1820
ID Description Score Start End GO Terms
AF-A0A833GHX2-F1-model_v4 Peptidase S10 0.9906 52 491 GO:0004185
GO:0006508
AF-A0A2W5I3H3-F1-model_v4 deleted 0.9885 105 491
AF-D4T6A5-F1-model_v4 deleted 0.987 198 491
AF-A0A2W5PCK5-F1-model_v4 deleted 0.972 58 391
AF-A0A833GHX2-F1-model_v4 Peptidase S10 0.9709 52 491 GO:0004185
GO:0006508

Map