F354952

General Info

Members Datasets Scaffolds Average Seq Length
242 169 229 468

Family's Representative Sequence

Representative Sequence 3300046472|Ga0495580_0033576|Ga0495580_0033576_1817_3382
Length 521
Sequence LGARRRAREIARSRAGPGARDFEFPVACRAVSGNVTRTNQHRVPVPQLLESRSIDYVPLSERHGKVWHLWPVWFAGDAHLATLAVGVLGISMGGNLLWTSVAVILGCLLGTFFMAFHATQGPQLGLPQMIQSRPQFGYTGALLVWGVALVAYIGYTALNQVLAGQAVHQLVPSVSATSPVVICVFALLAVAVAAVGYDKIHLAQRLFAYGMIAILTVFSVGALVVLKFPAAQWDPAGFRGVPFLAQLFFAASYQLSWSIYVSDYSRYLPREVGVRESFWWTYLGAFIGGAWMMLVGTVAAATAPKLDVAAAMESAADQVYPGLGRVLLAAALLGLVAVSTLNYYGASLTLLSVADTLKPLKSTAGKRVTSLVVAYLASTAIALGSSSSFGSRFGDLLAVLLYLFTPWTAINLVDFYVVRKGHYSIREIFNPNGMYGRWNWRGLGAYFVGFLVMVPFFSTEAWRGPIARMLDGADIAMLIGLPVAAGVYLWACRSLNFQQEQARAAAADVGLEPAEALKRAA

Samples

Sample ID Description Type Environment
1 2558860280 Kutzneria sp. 744 Isolate Unclassified
2 2643221598 Phenylobacterium sp. Root700 Isolate Unclassified
3 2643221670 Streptomyces sp. Root431 Isolate Unclassified
4 2738541275 Novosphingobium sp. GV027 Isolate Unclassified
5 2738541301 Novosphingobium sp. GV079 Isolate Unclassified
6 2738541304 Novosphingobium sp. GV061 Isolate Unclassified
7 2738543022 Novosphingobium sp. GV055 Isolate Unclassified
8 2738543033 Novosphingobium sp. GV064 Isolate Unclassified
9 2928100450 Novosphingobium sp. 1529 Isolate Rhizosphere
10 2928959182 Novosphingobium capsulatum 1057 Isolate Unclassified
11 2939582691 Mycolicibacterium sp. 624 Isolate Rhizosphere
12 2995463766 Streptacidiphilus fuscans NEAU-YB345 Isolate Unclassified
13 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
14 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
15 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
16 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
17 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
18 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
19 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
20 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
21 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
22 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
23 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
24 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
25 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
26 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
27 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
28 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
29 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
30 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
31 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
32 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
33 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
34 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
35 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
36 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
37 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
38 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
39 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
40 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
41 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
42 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
44 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
45 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
46 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
47 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
48 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
49 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
50 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
51 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
52 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
53 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
54 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
55 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
56 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
57 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
58 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
59 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
60 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
61 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
62 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
63 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300027512 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
88 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
89 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
90 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
91 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
92 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
93 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
94 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
95 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
96 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
97 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
98 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
99 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
100 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
101 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
102 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
103 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
104 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
105 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
106 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
107 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
108 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
109 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
110 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
111 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
112 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
113 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
114 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
115 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
116 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
117 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
118 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
119 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
120 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
121 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
122 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
123 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
124 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
125 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
126 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
127 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
128 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
129 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
130 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
131 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
132 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
133 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
134 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
135 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
136 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
137 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
138 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
139 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
140 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
141 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
142 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
143 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
144 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
145 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
146 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
147 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
148 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
149 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
150 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
151 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
152 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
153 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
154 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
155 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
156 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
157 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
158 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
159 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
160 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
161 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
162 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
163 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
164 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
165 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
166 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
167 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
168 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
169 8057101203 Sphingomonas lycopersici MMSM20 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 94.63
Metatranscriptomes 0
Isolates 5.37

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.31
Nodule 0
Rhizoplane 11.57
Rhizosphere 70.66
Stem 0
Stem Tuber 0
Unclassified 14.46

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10012008 3300001979 Bacteria 3277
2 Ga0055540_1000986 3300003792 Bacteria 18359
3 Ga0070683_100190351 3300005329 Bacteria 1948
4 Ga0070690_100018281 3300005330 Bacteria 4231
5 Ga0070666_10040601 3300005335 Bacteria 3105
6 Ga0070666_10046035 3300005335 Bacteria 2925
7 Ga0070680_100011055 3300005336 Bacteria 6975
8 Ga0068868_100016989 3300005338 Bacteria 5414
9 Ga0070671_100016266 3300005355 Bacteria 6016
10 Ga0070709_10006298 3300005434 Bacteria 6462
11 Ga0070709_10101129 3300005434 Bacteria 1921
12 Ga0070710_10025258 3300005437 Bacteria 3145
13 Ga0070711_100030328 3300005439 Bacteria 3578
14 Ga0070681_10030636 3300005458 Bacteria 5399
15 Ga0070681_10046057 3300005458 Bacteria 4361
16 Ga0070679_100060237 3300005530 Bacteria 3783
17 Ga0070679_100130572 3300005530 Bacteria 2494
18 Ga0068853_100056465 3300005539 Bacteria 3385
19 Ga0070695_100016159 3300005545 Bacteria 4514
20 Ga0070696_100037842 3300005546 Bacteria 3328
21 Ga0070665_100000295 3300005548 Bacteria 78617
22 Ga0070665_100022315 3300005548 Bacteria 6370
23 Ga0070665_100027388 3300005548 Bacteria 5742
24 Ga0068855_100008025 3300005563 Bacteria 12751
25 Ga0068856_100168643 3300005614 Bacteria 2201
26 Ga0068859_100000092 3300005617 Bacteria 82442
27 Ga0068859_100049003 3300005617 Unclassified 4243
28 Ga0068866_10029131 3300005718 Bacteria 2638
29 Ga0068863_100014410 3300005841 Bacteria 7615
30 Ga0068858_100000650 3300005842 Bacteria 36243
31 Ga0068858_100006479 3300005842 Bacteria 11396
32 Ga0068858_100031545 3300005842 Bacteria 4922
33 Ga0068860_100013924 3300005843 Bacteria 7884
34 Ga0068860_100026796 3300005843 Bacteria 5554
35 Ga0070717_10209538 3300006028 Bacteria 1710
36 Ga0070715_10014351 3300006163 Bacteria 2932
37 Ga0070716_100083219 3300006173 Bacteria 1916
38 Ga0070712_100005654 3300006175 Bacteria 7733
39 Ga0070712_100063472 3300006175 Bacteria 2616
40 Ga0068865_100055893 3300006881 Bacteria 2748
41 Ga0068865_100083776 3300006881 Bacteria 2296
42 Ga0097620_100000092 3300006931 Bacteria 82442
43 Ga0097620_100049005 3300006931 Unclassified 4243
44 Ga0075435_100126890 3300007076 Bacteria 2133
45 Ga0099794_10000789 3300007265 Bacteria 10721
46 Ga0099795_10000002 3300007788 Bacteria 161112
47 Ga0105240_10009470 3300009093 Bacteria 13791
48 Ga0105240_10012457 3300009093 Bacteria 11736
49 Ga0105240_10211301 3300009093 Bacteria 2267
50 Ga0105245_10000974 3300009098 Bacteria 26146
51 Ga0105245_10064889 3300009098 Bacteria 3301
52 Ga0105247_10000611 3300009101 Bacteria 28766
53 Ga0105247_10007770 3300009101 Bacteria 6562
54 Ga0105242_10000618 3300009176 Bacteria 27877
55 Ga0105248_10027124 3300009177 Bacteria 6372
56 Ga0105248_10027308 3300009177 Bacteria 6352
57 Ga0105237_10018734 3300009545 Bacteria 7158
58 Ga0105237_10019862 3300009545 Bacteria 6936
59 Ga0105237_10030886 3300009545 Bacteria 5436
60 Ga0105237_10099774 3300009545 Bacteria 2895
61 Ga0105238_10039606 3300009551 Bacteria 4778
62 Ga0105249_10120178 3300009553 Bacteria 2496
63 Ga0099796_10000030 3300010159 Bacteria 32756
64 Ga0105239_10005455 3300010375 Bacteria 14928
65 Ga0105239_10079413 3300010375 Bacteria 3611
66 Ga0105239_10095063 3300010375 Bacteria 3292
67 Ga0157369_10063395 3300013105 Bacteria 3982
68 Ga0157369_10169589 3300013105 Bacteria 2300
69 Ga0157374_10036843 3300013296 Bacteria 4483
70 Ga0163162_10004872 3300013306 Bacteria 12952
71 Ga0163162_10147756 3300013306 Bacteria 2467
72 Ga0163162_10191618 3300013306 Bacteria 2172
73 Ga0163163_10016143 3300014325 Bacteria 6929
74 Ga0163163_10245949 3300014325 Bacteria 1839
75 Ga0157379_10001381 3300014968 Bacteria 19863
76 Ga0157379_10017499 3300014968 Bacteria 6310
77 Ga0157379_10113065 3300014968 Bacteria 2440
78 Ga0157379_10164479 3300014968 Bacteria 2002
79 Ga0157376_10009923 3300014969 Bacteria 6945
80 Ga0213876_10035184 3300021384 Bacteria 2642
81 Ga0209051_1001602 3300025303 Bacteria 18462
82 Ga0207710_10000960 3300025900 Bacteria 15190
83 Ga0207710_10005949 3300025900 Bacteria 5232
84 Ga0207699_10005308 3300025906 Bacteria 6172
85 Ga0207695_10017038 3300025913 Bacteria 8473
86 Ga0207693_10001437 3300025915 Bacteria 21130
87 Ga0207693_10018616 3300025915 Bacteria 5528
88 Ga0207663_10024755 3300025916 Bacteria 3461
89 Ga0207657_10082570 3300025919 Bacteria 2697
90 Ga0207700_10020681 3300025928 Bacteria 4477
91 Ga0207644_10025516 3300025931 Bacteria 4064
92 Ga0207644_10087435 3300025931 Bacteria 2316
93 Ga0207686_10031776 3300025934 Bacteria 3137
94 Ga0207665_10009548 3300025939 Bacteria 6373
95 Ga0207711_10006816 3300025941 Bacteria 9599
96 Ga0207711_10026040 3300025941 Bacteria 4905
97 Ga0207651_10143667 3300025960 Bacteria 1847
98 Ga0207658_10009325 3300025986 Bacteria 6655
99 Ga0207703_10000569 3300026035 Bacteria 37992
100 Ga0207703_10001638 3300026035 Bacteria 20173
101 Ga0207703_10014072 3300026035 Bacteria 6235
102 Ga0207678_10104083 3300026067 Bacteria 2422
103 Ga0207702_10114599 3300026078 Bacteria 2402
104 Ga0207641_10000846 3300026088 Bacteria 32521
105 Ga0207676_10162181 3300026095 Bacteria 1938
106 Ga0207675_100076692 3300026118 Bacteria 3130
107 Ga0207698_10025366 3300026142 Bacteria 4175
108 Ga0209179_1000003 3300027512 Bacteria 121837
109 Ga0268266_10012228 3300028379 Bacteria 7427
110 Ga0268266_10053013 3300028379 Bacteria 3484
111 Ga0268264_10000212 3300028381 Bacteria 116640
112 Ga0268264_10037263 3300028381 Bacteria 4009
113 Ga0268264_10102079 3300028381 Bacteria 2495
114 Ga0307511_10000187 3300030521 Bacteria 61443
115 Ga0265340_10002491 3300031247 Bacteria 10467
116 Ga0265316_10138541 3300031344 Bacteria 1830
117 Ga0307509_10000001 3300031507 Bacteria 629324
118 Ga0265313_10059145 3300031595 Bacteria 1804
119 Ga0307516_10000949 3300031730 Bacteria 39979
120 Ga0307516_10001439 3300031730 Bacteria 32863
121 Ga0307510_10000015 3300033180 Bacteria 258937
122 Ga0307510_10014436 3300033180 Bacteria 9347
123 Ga0307510_10041064 3300033180 Bacteria 5066
124 Ga0373923_0010395 3300035111 Bacteria 3384
125 Ga0373936_0027912 3300035113 Bacteria 2216
126 Ga0373954_0080406 3300035118 Bacteria 1557
127 Ga0373935_0159911 3300035692 Unclassified 1535
128 Ga0373933_0048957 3300035724 Bacteria 2518
129 Ga0373937_0007508 3300036401 Bacteria 9437
130 Ga0373925_0000182 3300037068 Bacteria 69006
131 Ga0395899_0002423 3300037312 Bacteria 15164
132 Ga0395898_0004265 3300037466 Bacteria 15684
133 Ga0395898_0024267 3300037466 Bacteria 6116
134 Ga0395901_0001300 3300038443 Bacteria 26317
135 Ga0395901_0018388 3300038443 Bacteria 7134
136 Ga0436365_0363247 3300039437 Bacteria 5423
137 Ga0436360_0552716 3300039438 Bacteria 16358
138 Ga0436361_0944555 3300039447 Bacteria 3093
139 Ga0436363_1449045 3300039450 Bacteria 19321
140 Ga0453683_0043482 3300044673 Bacteria 2819
141 Ga0466966_0003466 3300044684 Bacteria 10390
142 Ga0466966_0013278 3300044684 Bacteria 5453
143 Ga0466961_0018436 3300044693 Bacteria 4489
144 Ga0453684_0030350 3300044712 Bacteria 7637
145 Ga0453684_0082425 3300044712 Bacteria 4007
146 Ga0466959_0015313 3300045049 Bacteria 5583
147 Ga0466959_0019146 3300045049 Bacteria 5033
148 Ga0466959_0054806 3300045049 Bacteria 2912
149 Ga0466959_0102064 3300045049 Bacteria 2053
150 Ga0451576_0064832 3300045051 Bacteria 3805
151 Ga0466967_0044057 3300045976 Bacteria 3867
152 Ga0495592_0016435 3300046454 Bacteria 5614
153 Ga0495651_0001646 3300046462 Bacteria 17304
154 Ga0495580_0015013 3300046472 Bacteria 5861
155 Ga0495580_0033576 3300046472 Bacteria 3696
156 Ga0495608_0001559 3300046511 Bacteria 16374
157 Ga0495618_0065598 3300046514 Bacteria 2308
158 Ga0495628_0004080 3300046516 Bacteria 12987
159 Ga0495630_0022256 3300046517 Bacteria 4683
160 Ga0495652_0013162 3300046529 Bacteria 7449
161 Ga0495587_0008990 3300046536 Bacteria 6412
162 Ga0495667_0000526 3300046559 Bacteria 24519
163 Ga0495625_0146954 3300046660 Unclassified 1587
164 Ga0495635_0001837 3300046663 Bacteria 14359
165 Ga0495657_0002804 3300046675 Bacteria 14486
166 Ga0495599_0005079 3300046678 Bacteria 7835
167 Ga0495623_0027615 3300046679 Bacteria 3653
168 Ga0495646_0019288 3300046680 Bacteria 4318
169 Ga0495600_0003026 3300046809 Bacteria 9816
170 Ga0495604_0001493 3300047317 Bacteria 19279
171 Ga0495604_0066813 3300047317 Bacteria 2734
172 Ga0495674_0017169 3300047319 Bacteria 6740
173 Ga0495680_0004962 3300047322 Bacteria 12579
174 Ga0495675_0000847 3300047444 Bacteria 18727
175 Ga0495684_0007430 3300047471 Bacteria 8493
176 Ga0495602_0017074 3300048088 Bacteria 7281
177 Ga0495602_0061822 3300048088 Bacteria 3253
178 Ga0496101_0026925 3300048904 Bacteria 3999
179 Ga0496101_0185391 3300048904 Bacteria 1604
180 Ga0496102_0059104 3300048905 Bacteria 3505
181 Ga0496102_0070750 3300048905 Bacteria 3203
182 Ga0496104_0027988 3300048907 Bacteria 5220
183 Ga0496104_0045598 3300048907 Bacteria 4124
184 Ga0496104_0084950 3300048907 Bacteria 3021
185 Ga0496104_0164150 3300048907 Bacteria 2130
186 Ga0496105_0022333 3300048908 Bacteria 5124
187 Ga0496105_0045108 3300048908 Bacteria 3637
188 Ga0496106_0030406 3300048909 Bacteria 4028
189 Ga0496107_0068389 3300048910 Bacteria 2578
190 Ga0496108_0014943 3300048911 Bacteria 6336
191 Ga0496108_0032038 3300048911 Bacteria 4364
192 Ga0496108_0033703 3300048911 Bacteria 4254
193 Ga0496109_0013344 3300048912 Bacteria 7122
194 Ga0496109_0089733 3300048912 Bacteria 2842
195 Ga0496110_0001976 3300048913 Bacteria 15242
196 Ga0496110_0024300 3300048913 Bacteria 5163
197 Ga0496110_0047603 3300048913 Bacteria 3756
198 Ga0496111_0000403 3300048914 Bacteria 21647
199 Ga0496111_0020856 3300048914 Bacteria 4568
200 Ga0496112_0031982 3300048915 Bacteria 5108
201 Ga0496114_0006303 3300048917 Bacteria 9336
202 Ga0496114_0022250 3300048917 Bacteria 5165
203 Ga0496114_0190881 3300048917 Bacteria 1792
204 Ga0496115_0050527 3300048918 Bacteria 3331
205 Ga0496115_0058582 3300048918 Bacteria 3099
206 Ga0496116_0008309 3300048919 Bacteria 9022
207 Ga0496117_0000106 3300048920 Bacteria 188425
208 Ga0496117_0076199 3300048920 Bacteria 2225
209 Ga0496118_0000005 3300048921 Bacteria 697350
210 Ga0496118_0014173 3300048921 Bacteria 7476
211 Ga0496119_0001334 3300048922 Bacteria 30291
212 Ga0496120_0000199 3300048923 Bacteria 103142
213 Ga0496120_0013597 3300048923 Bacteria 5469
214 Ga0496121_0003655 3300048924 Bacteria 21631
215 Ga0496121_0039999 3300048924 Bacteria 4120
216 Ga0496124_0049718 3300048927 Bacteria 3575
217 Ga0496125_0002183 3300048928 Bacteria 26112
218 Ga0496125_0007551 3300048928 Bacteria 11548
219 Ga0496126_0045823 3300048929 Bacteria 4016
220 Ga0496126_0109817 3300048929 Bacteria 2403
221 nmdc:mga0rr50_145052_c1 3300050513 Bacteria 1913
222 Ga0495612_0032545 3300053078 Bacteria 2108
223 Ga0495595_0009099 3300053084 Bacteria 4102
224 Ga0500643_000081 3300053087 Bacteria 101681
225 Ga0500572_014252 3300053111 Bacteria 1983
226 Ga0500559_0000457 3300053136 Bacteria 29039
227 Ga0500616_0053580 3300053153 Bacteria 2116
228 Ga0500637_0050205 3300053178 Bacteria 2376
229 Ga0500661_000088 3300055283 Bacteria 14826

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300010375 Ga0105239_10005455 Ga0105239_100054553 405
2 3300026067 Ga0207678_10104083 Ga0207678_101040833 417
3 3300045049 Ga0466959_0019146 Ga0466959_0019146_1508_2959 419
4 3300035692 Ga0373935_0159911 Ga0373935_0159911_220_1509 425
5 3300039450 Ga0436363_1449045 Ga0436363_1449045_17224_18636 425
6 3300005842 Ga0068858_100006479 Ga0068858_1000064792 427
7 3300025900 Ga0207710_10005949 Ga0207710_100059491 427
8 3300026035 Ga0207703_10001638 Ga0207703_100016386 427
9 3300048928 Ga0496125_0002183 Ga0496125_0002183_8777_10186 427
10 3300048905 Ga0496102_0059104 Ga0496102_0059104_2108_3466 430
11 3300035113 Ga0373936_0027912 Ga0373936_0027912_184_1611 431
12 3300048929 Ga0496126_0045823 Ga0496126_0045823_764_2191 432
13 3300053153 Ga0500616_0053580 Ga0500616_0053580_658_2061 436
14 3300053087 Ga0500643_000081 Ga0500643_000081_48707_50104 437
15 3300053136 Ga0500559_0000457 Ga0500559_0000457_14747_16144 437
16 3300055283 Ga0500661_000088 Ga0500661_000088_1054_2451 437
17 3300048923 Ga0496120_0013597 Ga0496120_0013597_279_1691 439
18 3300048928 Ga0496125_0007551 Ga0496125_0007551_4156_5568 439
19 3300007076 Ga0075435_100126890 Ga0075435_1001268902 441
20 3300045049 Ga0466959_0054806 Ga0466959_0054806_213_1655 441
21 3300050513 nmdc:mga0rr50_145052_c1 nmdc:mga0rr50_145052_c1_225_1634 441
22 3300047317 Ga0495604_0066813 Ga0495604_0066813_569_2008 442
23 3300048088 Ga0495602_0061822 Ga0495602_0061822_1350_2789 442
24 3300048922 Ga0496119_0001334 Ga0496119_0001334_27096_28508 442
25 3300048923 Ga0496120_0000199 Ga0496120_0000199_85289_86701 442
26 3300025919 Ga0207657_10082570 Ga0207657_100825701 443
27 3300005329 Ga0070683_100190351 Ga0070683_1001903512 446
28 3300006163 Ga0070715_10014351 Ga0070715_100143512 446
29 3300009098 Ga0105245_10064889 Ga0105245_100648893 446
30 3300009545 Ga0105237_10099774 Ga0105237_100997742 446
31 3300013105 Ga0157369_10063395 Ga0157369_100633952 446
32 3300026088 Ga0207641_10000846 Ga0207641_1000084625 446
33 3300026118 Ga0207675_100076692 Ga0207675_1000766923 446
34 3300028381 Ga0268264_10000212 Ga0268264_1000021223 446
35 3300039447 Ga0436361_0944555 Ga0436361_0944555_1352_2797 446
36 3300045976 Ga0466967_0044057 Ga0466967_0044057_2275_3774 446
37 3300048904 Ga0496101_0026925 Ga0496101_0026925_1234_2799 446
38 3300048905 Ga0496102_0070750 Ga0496102_0070750_1122_2687 446
39 3300048907 Ga0496104_0027988 Ga0496104_0027988_3294_4823 446
40 3300048908 Ga0496105_0045108 Ga0496105_0045108_766_2295 446
41 3300048910 Ga0496107_0068389 Ga0496107_0068389_820_2385 446
42 3300048911 Ga0496108_0033703 Ga0496108_0033703_1050_2579 446
43 3300048912 Ga0496109_0089733 Ga0496109_0089733_709_2238 446
44 3300048913 Ga0496110_0047603 Ga0496110_0047603_1846_3375 446
45 3300048917 Ga0496114_0022250 Ga0496114_0022250_912_2477 446
46 3300048918 Ga0496115_0050527 Ga0496115_0050527_999_2564 446
47 3300005335 Ga0070666_10046035 Ga0070666_100460351 447
48 3300005617 Ga0068859_100049003 Ga0068859_1000490032 447
49 3300006931 Ga0097620_100049005 Ga0097620_1000490052 447
50 3300009098 Ga0105245_10000974 Ga0105245_1000097410 447
51 3300009177 Ga0105248_10027308 Ga0105248_100273084 447
52 3300009553 Ga0105249_10120178 Ga0105249_101201783 447
53 3300013296 Ga0157374_10036843 Ga0157374_100368433 447
54 3300013306 Ga0163162_10004872 Ga0163162_100048725 447
55 3300014325 Ga0163163_10016143 Ga0163163_100161433 447
56 3300014325 Ga0163163_10245949 Ga0163163_102459492 447
57 3300014968 Ga0157379_10001381 Ga0157379_100013813 447
58 3300014969 Ga0157376_10009923 Ga0157376_100099234 447
59 3300026095 Ga0207676_10162181 Ga0207676_101621812 447
60 3300048904 Ga0496101_0185391 Ga0496101_0185391_116_1525 447
61 3300048907 Ga0496104_0045598 Ga0496104_0045598_535_1944 447
62 3300048911 Ga0496108_0014943 Ga0496108_0014943_1730_3139 447
63 3300048912 Ga0496109_0013344 Ga0496109_0013344_2849_4258 447
64 3300048913 Ga0496110_0001976 Ga0496110_0001976_2182_3591 447
65 3300048914 Ga0496111_0000403 Ga0496111_0000403_11368_12777 447
66 iso_pu_bacteria 8057101203 8057103877 447
67 3300005336 Ga0070680_100011055 Ga0070680_1000110558 448
68 3300005458 Ga0070681_10046057 Ga0070681_100460576 448
69 3300005530 Ga0070679_100130572 Ga0070679_1001305721 448
70 3300005563 Ga0068855_100008025 Ga0068855_1000080257 448
71 3300009093 Ga0105240_10009470 Ga0105240_1000947010 448
72 3300009545 Ga0105237_10018734 Ga0105237_100187341 448
73 3300025913 Ga0207695_10017038 Ga0207695_100170384 448
74 3300044684 Ga0466966_0013278 Ga0466966_0013278_2799_4226 448
75 3300045049 Ga0466959_0102064 Ga0466959_0102064_307_1734 448
76 3300005548 Ga0070665_100000295 Ga0070665_1000002958 450
77 3300014968 Ga0157379_10164479 Ga0157379_101644792 450
78 3300028379 Ga0268266_10012228 Ga0268266_100122282 450
79 3300053178 Ga0500637_0050205 Ga0500637_0050205_188_1615 450
80 3300053111 Ga0500572_014252 Ga0500572_014252_424_1851 451
81 3300044673 Ga0453683_0043482 Ga0453683_0043482_948_2372 452
82 3300044712 Ga0453684_0030350 Ga0453684_0030350_979_2403 452
83 3300045051 Ga0451576_0064832 Ga0451576_0064832_611_2035 452
84 3300013105 Ga0157369_10169589 Ga0157369_101695892 453
85 3300006881 Ga0068865_100055893 Ga0068865_1000558932 455
86 3300025934 Ga0207686_10031776 Ga0207686_100317763 455
87 3300025941 Ga0207711_10006816 Ga0207711_100068166 455
88 3300025960 Ga0207651_10143667 Ga0207651_101436672 455
89 3300026035 Ga0207703_10014072 Ga0207703_100140722 455
90 3300028381 Ga0268264_10037263 Ga0268264_100372632 455
91 3300033180 Ga0307510_10000015 Ga0307510_10000015113 455
92 3300048919 Ga0496116_0008309 Ga0496116_0008309_3443_4855 455
93 3300048920 Ga0496117_0000106 Ga0496117_0000106_23127_24539 455
94 3300048921 Ga0496118_0000005 Ga0496118_0000005_375901_377313 455
95 3300048924 Ga0496121_0039999 Ga0496121_0039999_2027_3439 455
96 3300048927 Ga0496124_0049718 Ga0496124_0049718_1247_2659 455
97 3300048929 Ga0496126_0109817 Ga0496126_0109817_730_2142 455
98 3300009093 Ga0105240_10012457 Ga0105240_100124574 457
99 3300033180 Ga0307510_10041064 Ga0307510_100410642 457
100 3300007788 Ga0099795_10000002 Ga0099795_10000002152 458
101 3300009545 Ga0105237_10030886 Ga0105237_100308866 458
102 3300010159 Ga0099796_10000030 Ga0099796_1000003010 458
103 3300027512 Ga0209179_1000003 Ga0209179_1000003108 458
104 3300037068 Ga0373925_0000182 Ga0373925_0000182_33562_34980 458
105 iso_pu_bacteria 2643221598 2643999385 458
106 3300005617 Ga0068859_100000092 Ga0068859_1000000921 459
107 3300005841 Ga0068863_100014410 Ga0068863_1000144105 459
108 3300005842 Ga0068858_100000650 Ga0068858_10000065030 459
109 3300005843 Ga0068860_100026796 Ga0068860_1000267964 459
110 3300006931 Ga0097620_100000092 Ga0097620_1000000921 459
111 3300009101 Ga0105247_10000611 Ga0105247_1000061126 459
112 3300014968 Ga0157379_10017499 Ga0157379_100174992 459
113 3300025900 Ga0207710_10000960 Ga0207710_100009609 459
114 3300025931 Ga0207644_10087435 Ga0207644_100874351 459
115 3300025986 Ga0207658_10009325 Ga0207658_100093251 459
116 3300026035 Ga0207703_10000569 Ga0207703_1000056931 459
117 3300044712 Ga0453684_0082425 Ga0453684_0082425_782_2191 459
118 3300048911 Ga0496108_0032038 Ga0496108_0032038_1683_3128 459
119 3300048915 Ga0496112_0031982 Ga0496112_0031982_3532_4977 459
120 3300048924 Ga0496121_0003655 Ga0496121_0003655_16467_17912 459
121 iso_pu_bacteria 2738541275 2738708937 459
122 iso_pu_bacteria 2738541301 2738847362 459
123 iso_pu_bacteria 2738541304 2738863091 459
124 iso_pu_bacteria 2738543022 2739295609 459
125 iso_pu_bacteria 2738543033 2739357287 459
126 iso_pu_bacteria 2928100450 2928102305 459
127 iso_pu_bacteria 2928959182 2928961193 459
128 3300035724 Ga0373933_0048957 Ga0373933_0048957_437_1864 460
129 3300036401 Ga0373937_0007508 Ga0373937_0007508_7666_9093 460
130 3300046454 Ga0495592_0016435 Ga0495592_0016435_2315_3742 460
131 3300046462 Ga0495651_0001646 Ga0495651_0001646_6879_8306 460
132 3300046511 Ga0495608_0001559 Ga0495608_0001559_7387_8814 460
133 3300046514 Ga0495618_0065598 Ga0495618_0065598_715_2142 460
134 3300046516 Ga0495628_0004080 Ga0495628_0004080_2096_3523 460
135 3300046529 Ga0495652_0013162 Ga0495652_0013162_1797_3224 460
136 3300046536 Ga0495587_0008990 Ga0495587_0008990_3577_5004 460
137 3300046559 Ga0495667_0000526 Ga0495667_0000526_10984_12411 460
138 3300046663 Ga0495635_0001837 Ga0495635_0001837_8566_9993 460
139 3300046675 Ga0495657_0002804 Ga0495657_0002804_11267_12694 460
140 3300046678 Ga0495599_0005079 Ga0495599_0005079_5650_7077 460
141 3300046679 Ga0495623_0027615 Ga0495623_0027615_1066_2493 460
142 3300046680 Ga0495646_0019288 Ga0495646_0019288_1760_3187 460
143 3300046809 Ga0495600_0003026 Ga0495600_0003026_4224_5651 460
144 3300047317 Ga0495604_0001493 Ga0495604_0001493_13576_15003 460
145 3300047319 Ga0495674_0017169 Ga0495674_0017169_344_1771 460
146 3300047322 Ga0495680_0004962 Ga0495680_0004962_9749_11176 460
147 3300047444 Ga0495675_0000847 Ga0495675_0000847_3032_4459 460
148 3300047471 Ga0495684_0007430 Ga0495684_0007430_5839_7266 460
149 3300048088 Ga0495602_0017074 Ga0495602_0017074_98_1525 460
150 3300053078 Ga0495612_0032545 Ga0495612_0032545_199_1626 460
151 3300053084 Ga0495595_0009099 Ga0495595_0009099_1432_2859 460
152 3300037466 Ga0395898_0024267 Ga0395898_0024267_4401_5849 464
153 3300038443 Ga0395901_0018388 Ga0395901_0018388_193_1641 464
154 3300007265 Ga0099794_10000789 Ga0099794_100007897 465
155 3300010375 Ga0105239_10095063 Ga0105239_100950633 465
156 3300031730 Ga0307516_10001439 Ga0307516_1000143921 465
157 3300033180 Ga0307510_10014436 Ga0307510_100144366 465
158 3300005548 Ga0070665_100027388 Ga0070665_1000273886 466
159 3300028379 Ga0268266_10053013 Ga0268266_100530134 466
160 3300048920 Ga0496117_0076199 Ga0496117_0076199_336_1745 466
161 3300048921 Ga0496118_0014173 Ga0496118_0014173_2353_3762 466
162 3300005330 Ga0070690_100018281 Ga0070690_1000182813 467
163 3300005335 Ga0070666_10040601 Ga0070666_100406012 467
164 3300005338 Ga0068868_100016989 Ga0068868_1000169892 467
165 3300005355 Ga0070671_100016266 Ga0070671_1000162664 467
166 3300005434 Ga0070709_10101129 Ga0070709_101011292 467
167 3300005437 Ga0070710_10025258 Ga0070710_100252581 467
168 3300005548 Ga0070665_100022315 Ga0070665_1000223152 467
169 3300005614 Ga0068856_100168643 Ga0068856_1001686432 467
170 3300005718 Ga0068866_10029131 Ga0068866_100291312 467
171 3300005842 Ga0068858_100031545 Ga0068858_1000315452 467
172 3300005843 Ga0068860_100013924 Ga0068860_1000139243 467
173 3300006175 Ga0070712_100005654 Ga0070712_1000056544 467
174 3300006881 Ga0068865_100083776 Ga0068865_1000837762 467
175 3300009093 Ga0105240_10211301 Ga0105240_102113012 467
176 3300009101 Ga0105247_10007770 Ga0105247_100077704 467
177 3300009176 Ga0105242_10000618 Ga0105242_100006182 467
178 3300009177 Ga0105248_10027124 Ga0105248_100271244 467
179 3300009545 Ga0105237_10019862 Ga0105237_100198622 467
180 3300010375 Ga0105239_10079413 Ga0105239_100794131 467
181 3300013306 Ga0163162_10147756 Ga0163162_101477562 467
182 3300014968 Ga0157379_10113065 Ga0157379_101130651 467
183 3300025915 Ga0207693_10001437 Ga0207693_100014374 467
184 3300025931 Ga0207644_10025516 Ga0207644_100255162 467
185 3300025939 Ga0207665_10009548 Ga0207665_100095484 467
186 3300025941 Ga0207711_10026040 Ga0207711_100260401 467
187 3300026078 Ga0207702_10114599 Ga0207702_101145992 467
188 3300028381 Ga0268264_10102079 Ga0268264_101020791 467
189 3300035111 Ga0373923_0010395 Ga0373923_0010395_1856_3289 467
190 3300035118 Ga0373954_0080406 Ga0373954_0080406_89_1522 467
191 3300046472 Ga0495580_0015013 Ga0495580_0015013_4405_5838 467
192 3300046472 Ga0495580_0033576 Ga0495580_0033576_1817_3382 467
193 3300046517 Ga0495630_0022256 Ga0495630_0022256_1758_3191 467
194 3300048909 Ga0496106_0030406 Ga0496106_0030406_2485_3918 467
195 3300048913 Ga0496110_0024300 Ga0496110_0024300_3359_4792 467
196 3300048914 Ga0496111_0020856 Ga0496111_0020856_129_1562 467
197 3300048917 Ga0496114_0190881 Ga0496114_0190881_332_1765 467
198 3300048918 Ga0496115_0058582 Ga0496115_0058582_1561_2994 467
199 3300031344 Ga0265316_10138541 Ga0265316_101385412 468
200 3300044684 Ga0466966_0003466 Ga0466966_0003466_7507_8961 468
201 3300044693 Ga0466961_0018436 Ga0466961_0018436_1298_2752 468
202 3300045049 Ga0466959_0015313 Ga0466959_0015313_1577_3031 468
203 3300005439 Ga0070711_100030328 Ga0070711_1000303282 469
204 3300005458 Ga0070681_10030636 Ga0070681_100306365 469
205 3300005530 Ga0070679_100060237 Ga0070679_1000602374 469
206 3300005545 Ga0070695_100016159 Ga0070695_1000161593 469
207 3300021384 Ga0213876_10035184 Ga0213876_100351842 469
208 3300025906 Ga0207699_10005308 Ga0207699_100053082 469
209 3300025916 Ga0207663_10024755 Ga0207663_100247553 469
210 3300031507 Ga0307509_10000001 Ga0307509_10000001556 469
211 3300039437 Ga0436365_0363247 Ga0436365_0363247_849_2285 469
212 3300046660 Ga0495625_0146954 Ga0495625_0146954_69_1547 469
213 3300003792 Ga0055540_1000986 Ga0055540_100098610 470
214 3300005434 Ga0070709_10006298 Ga0070709_100062984 470
215 3300006028 Ga0070717_10209538 Ga0070717_102095381 470
216 3300006173 Ga0070716_100083219 Ga0070716_1000832192 470
217 3300006175 Ga0070712_100063472 Ga0070712_1000634722 470
218 3300025303 Ga0209051_1001602 Ga0209051_100160210 470
219 3300025915 Ga0207693_10018616 Ga0207693_100186163 470
220 3300039438 Ga0436360_0552716 Ga0436360_0552716_5215_6654 470
221 iso_pu_bacteria 2939582691 2939589082 470
222 3300025928 Ga0207700_10020681 Ga0207700_100206814 471
223 3300037312 Ga0395899_0002423 Ga0395899_0002423_9632_11122 471
224 3300037466 Ga0395898_0004265 Ga0395898_0004265_4562_6052 471
225 3300038443 Ga0395901_0001300 Ga0395901_0001300_20756_22246 471
226 3300048907 Ga0496104_0164150 Ga0496104_0164150_23_1477 471
227 3300005546 Ga0070696_100037842 Ga0070696_1000378422 472
228 3300031730 Ga0307516_10000949 Ga0307516_1000094911 472
229 3300048907 Ga0496104_0084950 Ga0496104_0084950_1097_2527 472
230 3300048908 Ga0496105_0022333 Ga0496105_0022333_1191_2621 472
231 3300048917 Ga0496114_0006303 Ga0496114_0006303_1810_3291 472
232 3300030521 Ga0307511_10000187 Ga0307511_1000018751 473
233 3300031595 Ga0265313_10059145 Ga0265313_100591452 473
234 iso_pu_bacteria 2558860280 2559423444 473
235 iso_pu_bacteria 2643221670 2644388133 475
236 3300031247 Ga0265340_10002491 Ga0265340_100024912 476
237 iso_pu_bacteria 2995463766 2995465110 477
238 3300013306 Ga0163162_10191618 Ga0163162_101916182 479
239 3300005539 Ga0068853_100056465 Ga0068853_1000564652 482
240 3300009551 Ga0105238_10039606 Ga0105238_100396062 482
241 3300026142 Ga0207698_10025366 Ga0207698_100253661 482
242 3300001979 JGI24740J21852_10012008 JGI24740J21852_100120082 487

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02133

Transp_cyt_pur

Permease for cytosine/purines, uracil, thiamine, allantoin

56

480

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
7qoa-assembly2.cif.gz_B structure of codb, a cytosine transporter in an outward-facing conformation 0.8205 28 468
7qoa-assembly2.cif.gz_B structure of codb, a cytosine transporter in an outward-facing conformation 0.8113 28 468
2jln-assembly1.cif.gz_A structure of mhp1, a nucleobase-cation-symport-1 family transporter 0.7662 23 479
2jln-assembly1.cif.gz_A structure of mhp1, a nucleobase-cation-symport-1 family transporter 0.7528 23 479
2x79-assembly1.cif.gz_A inward facing conformation of mhp1 0.7099 23 479
ID Description Score Start End Superfamily
af_Q12119_63_501_1.10.4160.10 Mainly Alpha;Orthogonal Bundle;Hydantoin permease;Hydantoin permease 0.874 23 443 1.10.4160.10
af_P53099_71_468_1.10.4160.10 Mainly Alpha;Orthogonal Bundle;Hydantoin permease;Hydantoin permease 0.8459 29 392 1.10.4160.10
af_A0A1D8PJQ2_67_497_1.10.4160.10 Mainly Alpha;Orthogonal Bundle;Hydantoin permease;Hydantoin permease 0.8411 25 448 1.10.4160.10
af_A0A1D8PTX5_60_507_1.10.4160.10 Mainly Alpha;Orthogonal Bundle;Hydantoin permease;Hydantoin permease 0.8384 41 451 1.10.4160.10
af_Q12119_63_501_1.10.4160.10 Mainly Alpha;Orthogonal Bundle;Hydantoin permease;Hydantoin permease 0.8383 23 443 1.10.4160.10
ID Description Score Start End GO Terms
AF-A0A534C002-F1-model_v4 Cytosine permease 0.9917 24 468 GO:0005886
GO:0022857
AF-A0A534ALP5-F1-model_v4 Cytosine permease 0.9911 45 484 GO:0005886
GO:0022857
AF-A0A534AGS4-F1-model_v4 Cytosine permease 0.9889 90 483 GO:0005886
GO:0022857
AF-A0A2S4XR63-F1-model_v4 Cytosine permease 0.9885 24 487 GO:0005886
GO:0022857
AF-A0A0L8QNJ3-F1-model_v4 deleted 0.9855 25 316

Feature Viewer

pLDDT pTM Quality
89.86 0.89 High
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Predicted Structure (AlphaFold2)

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