F355303

General Info

Members Datasets Scaffolds Average Seq Length
243 158 486 605

Family's Representative Sequence

Representative Sequence 3300005331|Ga0070670_100000018|Ga0070670_100000018168
Length 651
Sequence LSTQDARLAAQWLPGKLAPFSRWCRPLSPSSPSNTVILGLSAYYHDSAAALVRAGEIVAAAQEERFTRKKHDAAFPANAIAYCLEEARLTLADVDYVVFYDKPLIKFERLLETYLTYAPKGVRSFLAAMPVWLKEKLYLKATLKKELAALGGLSEKQLPQLLFTEHHQAHAASAFFPSPFQNAAVMCLDGVGEWATSSVWLGEGNKLTPQWEIDFPHSLGLLYSAFTYYTGFKVNSGEYKLMGLAPYGEPKFVDIILNNLIDIKDDGTFRLDMRYFNYATGLTMTNDKFAELFGGPARKPESPLTQREMDIAASIQVVTEEIVLKLARTVQRELKQDYLCLAGGVALNCVANGRLLREGIFKDVWIQPAAGDAGGALGAALAIWHEYLGNARTAPDQTCSVGDRMRGSYLGPWFGSDNICGYLDTIKAPYKKLDDAEFYNELSDVLAAEKVVGWFQGRMEFGPRALGGRSIIGDPRSAKMQSVMNLKIKYRESFRPFAPAIKAERVSEWFVHDRSSPYMLMVAPVREDKRIAMTAEQQQLFGIEKLLVPRSQIPAVTHVDYSARIQTVHADTNPRFYQLLDHFEQKTGCPVLVNTSFNVRGEPIVCTPEDAYRCFMRTEMDCLVLENVVLHKHEQPVWEEQDDWQNEFELD

Samples

Sample ID Description Type Environment
1 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
2 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
8 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
9 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
10 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
11 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
12 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
13 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
14 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
15 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
16 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
17 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
18 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
19 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
20 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
21 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
22 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
23 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
24 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
25 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
26 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
27 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
28 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
29 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
30 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
31 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
32 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
33 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
55 3300030736 Rhizosphere soil microbial communities in healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 6 Metagenome Rhizosphere
56 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
57 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
58 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
59 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
60 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
61 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
62 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
63 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
64 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
65 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
66 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
67 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
68 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
69 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
70 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
71 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
72 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
73 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
74 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
75 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
76 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
77 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
78 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
79 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
80 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
81 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
82 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
83 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
84 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
85 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
86 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
87 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
88 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
89 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
90 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
91 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
92 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
93 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
94 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
95 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
96 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
97 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
98 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
99 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
100 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
101 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
102 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
103 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
104 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
105 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
106 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
107 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
108 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
109 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
110 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
111 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
112 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
113 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
114 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
115 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
116 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
117 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
118 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
119 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
120 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
121 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
122 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
123 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
124 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
125 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
126 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
127 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
128 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
129 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
130 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
131 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
132 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
133 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
134 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
135 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
136 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
137 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
141 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
143 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
144 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
145 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
146 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
147 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
148 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
149 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
150 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
151 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
152 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
153 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
154 2643221556 Massilia sp. Root1485 Isolate Unclassified
155 2643221684 Massilia sp. Root133 Isolate Unclassified
156 2643221717 Acidovorax sp. Root267 Isolate Unclassified
157 2738541278 Niastella sp. CF465 Isolate Unclassified
158 8047673197 Telluria mixta LMG 11547 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.53
Metatranscriptomes 0.41
Isolates 2.06

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.65
Nodule 0
Rhizoplane 2.06
Rhizosphere 89.71
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070670_100000018 3300005331 Bacteria 221691
2 Ga0055525_1000105 3300003759 Bacteria 134026
3 Ga0070658_10030572 3300005327 Bacteria 4326
4 Ga0070658_10067440 3300005327 Bacteria 2923
5 Ga0070676_10019788 3300005328 Bacteria 3750
6 Ga0070666_10008217 3300005335 Bacteria 6469
7 Ga0070660_100029607 3300005339 Bacteria 4105
8 Ga0070661_100014331 3300005344 Bacteria 5584
9 Ga0070675_100128974 3300005354 Bacteria 2154
10 Ga0070671_100000084 3300005355 Bacteria 59737
11 Ga0070671_100023027 3300005355 Bacteria 5091
12 Ga0070659_100008588 3300005366 Bacteria 7468
13 Ga0070667_100000002 3300005367 Bacteria 504831
14 Ga0070713_100047532 3300005436 Bacteria 3528
15 Ga0070685_10000003 3300005466 Bacteria 283138
16 Ga0070685_10017099 3300005466 Bacteria 3876
17 Ga0070707_100113366 3300005468 Bacteria 2631
18 Ga0070665_100001280 3300005548 Bacteria 30114
19 Ga0068855_100014615 3300005563 Bacteria 9453
20 Ga0068855_100016288 3300005563 Bacteria 8940
21 Ga0070664_100033091 3300005564 Bacteria 4327
22 Ga0068864_100000002 3300005618 Bacteria 658857
23 Ga0068860_100000499 3300005843 Bacteria 48692
24 Ga0081540_1023954 3300005983 Bacteria 3554
25 Ga0070716_100054572 3300006173 Bacteria 2283
26 Ga0075428_100005135 3300006844 Bacteria 14555
27 Ga0075428_100016907 3300006844 Bacteria 8056
28 Ga0099794_10000035 3300007265 Bacteria 56711
29 Ga0105240_10000533 3300009093 Bacteria 70305
30 Ga0105240_10002479 3300009093 Bacteria 29666
31 Ga0105240_10089346 3300009093 Bacteria 3768
32 Ga0105240_10154279 3300009093 Bacteria 2733
33 Ga0105242_10000464 3300009176 Bacteria 32271
34 Ga0105249_10013365 3300009553 Bacteria 7249
35 Ga0105239_10001651 3300010375 Bacteria 29415
36 Ga0105239_10185661 3300010375 Bacteria 2327
37 Ga0157374_10001631 3300013296 Bacteria 18778
38 Ga0163163_10001034 3300014325 Bacteria 23573
39 Ga0157380_10008975 3300014326 Bacteria 7143
40 Ga0209563_100007 3300025230 Bacteria 1579402
41 Ga0209148_1000476 3300025254 Bacteria 42273
42 Ga0207710_10006642 3300025900 Bacteria 4931
43 Ga0207645_10024856 3300025907 Bacteria 3881
44 Ga0207705_10006888 3300025909 Bacteria 8397
45 Ga0207695_10000632 3300025913 Bacteria 70471
46 Ga0207695_10002023 3300025913 Bacteria 31171
47 Ga0207695_10077642 3300025913 Bacteria 3372
48 Ga0207657_10056037 3300025919 Bacteria 3402
49 Ga0207649_10010477 3300025920 Bacteria 5095
50 Ga0207681_10000509 3300025923 Bacteria 27059
51 Ga0207650_10000002 3300025925 Bacteria 1439222
52 Ga0207700_10050788 3300025928 Bacteria 3092
53 Ga0207644_10001002 3300025931 Bacteria 18049
54 Ga0207644_10035454 3300025931 Bacteria 3496
55 Ga0207690_10008143 3300025932 Bacteria 6220
56 Ga0207690_10017092 3300025932 Bacteria 4424
57 Ga0207686_10000090 3300025934 Bacteria 74224
58 Ga0207711_10000765 3300025941 Bacteria 31593
59 Ga0207667_10012901 3300025949 Bacteria 9599
60 Ga0207667_10019261 3300025949 Bacteria 7628
61 Ga0207658_10000001 3300025986 Bacteria 1439333
62 Ga0207703_10039090 3300026035 Bacteria 3790
63 Ga0207676_10000001 3300026095 Bacteria 1439222
64 Ga0209588_1000005 3300027671 Bacteria 197989
65 Ga0268266_10000525 3300028379 Bacteria 53447
66 Ga0268266_10010019 3300028379 Bacteria 8316
67 Ga0268265_10000455 3300028380 Bacteria 43315
68 Ga0268264_10000004 3300028381 Bacteria 1116842
69 Ga0316177_1192577 3300030731 Bacteria 4758
70 Ga0316180_1019625 3300030736 Bacteria 6435
71 Ga0265327_10008811 3300031251 Bacteria 7439
72 Ga0316575_10000941 3300031665 Bacteria 8948
73 Ga0307409_100022400 3300031995 Bacteria 4356
74 Ga0307411_10004377 3300032005 Bacteria 6754
75 Ga0316593_10020185 3300032168 Bacteria 2068
76 Ga0316574_0000630 3300035398 Bacteria 14733
77 Ga0373927_0014320 3300035695 Bacteria 5252
78 Ga0316584_0012417 3300036712 Bacteria 6007
79 Ga0316584_0067314 3300036712 Bacteria 2684
80 Ga0395899_0000028 3300037312 Bacteria 334378
81 Ga0395900_0015061 3300037418 Bacteria 7883
82 Ga0395900_0053441 3300037418 Bacteria 4157
83 Ga0395898_0026568 3300037466 Bacteria 5822
84 Ga0395905_0011508 3300037471 Bacteria 8549
85 Ga0395905_0097218 3300037471 Bacteria 2764
86 Ga0395901_0015889 3300038443 Bacteria 7670
87 Ga0400484_09557 3300038725 Bacteria 3326
88 Ga0400484_09595 3300038725 Bacteria 5848
89 Ga0400484_38473 3300038725 Bacteria 6506
90 Ga0400483_175791 3300039062 Bacteria 16643
91 Ga0400487_37292 3300039110 Bacteria 11547
92 Ga0439448_0000170 3300042005 Bacteria 13099
93 Ga0466969_0015930 3300044656 Bacteria 3939
94 Ga0466965_0016521 3300044683 Bacteria 3514
95 Ga0466966_0001482 3300044684 Bacteria 15080
96 Ga0466966_0007293 3300044684 Bacteria 7326
97 Ga0466964_0007231 3300044706 Bacteria 4149
98 Ga0466964_0013996 3300044706 Bacteria 3047
99 Ga0466957_0007894 3300044842 Bacteria 6036
100 Ga0466957_0012826 3300044842 Bacteria 4856
101 Ga0466960_0009404 3300044901 Bacteria 4028
102 Ga0466959_0010381 3300045049 Bacteria 6654
103 Ga0466959_0023654 3300045049 Bacteria 4547
104 Ga0466967_0024012 3300045976 Bacteria 5006
105 Ga0495617_000209 3300046452 Bacteria 36150
106 Ga0495590_0002329 3300046457 Bacteria 7901
107 Ga0495653_0005273 3300046463 Bacteria 10519
108 Ga0495653_0030896 3300046463 Bacteria 4261
109 Ga0495605_0000217 3300046474 Bacteria 71011
110 Ga0495605_0006219 3300046474 Bacteria 6882
111 Ga0495605_0012178 3300046474 Bacteria 4777
112 Ga0495605_0013845 3300046474 Bacteria 4432
113 Ga0495584_0000008 3300046491 Bacteria 283067
114 Ga0495584_0000028 3300046491 Bacteria 111816
115 Ga0495584_0000342 3300046491 Bacteria 32246
116 Ga0495584_0003861 3300046491 Bacteria 8128
117 Ga0495584_0009017 3300046491 Bacteria 5153
118 Ga0495584_0018443 3300046491 Bacteria 3546
119 Ga0495584_0048141 3300046491 Bacteria 2150
120 Ga0495585_0000086 3300046492 Bacteria 97481
121 Ga0495585_0000139 3300046492 Bacteria 79372
122 Ga0495585_0000285 3300046492 Bacteria 50703
123 Ga0495585_0022530 3300046492 Bacteria 3615
124 Ga0495596_0000528 3300046500 Bacteria 24030
125 Ga0495596_0000958 3300046500 Bacteria 17231
126 Ga0495607_0001072 3300046501 Bacteria 24976
127 Ga0495607_0004925 3300046501 Bacteria 9708
128 Ga0495583_0000213 3300046506 Bacteria 97714
129 Ga0495583_0000466 3300046506 Bacteria 59826
130 Ga0495583_0010515 3300046506 Bacteria 5392
131 Ga0495583_0031672 3300046506 Bacteria 2561
132 Ga0495616_0000144 3300046513 Bacteria 62419
133 Ga0495616_0009061 3300046513 Bacteria 5840
134 Ga0495616_0011279 3300046513 Bacteria 5129
135 Ga0495616_0030902 3300046513 Bacteria 2809
136 Ga0495616_0035036 3300046513 Bacteria 2600
137 Ga0495616_0036336 3300046513 Bacteria 2542
138 Ga0495631_0001611 3300046518 Bacteria 13485
139 Ga0495632_0001162 3300046519 Bacteria 22411
140 Ga0495632_0006291 3300046519 Bacteria 7670
141 Ga0495643_0002351 3300046522 Bacteria 15168
142 Ga0495643_0003610 3300046522 Bacteria 11248
143 Ga0495644_0001450 3300046523 Bacteria 9683
144 Ga0495648_0000030 3300046524 Bacteria 216178
145 Ga0495648_0013668 3300046524 Bacteria 5987
146 Ga0495648_0024201 3300046524 Bacteria 4142
147 Ga0495663_0003870 3300046525 Bacteria 4266
148 Ga0495663_0004629 3300046525 Bacteria 3856
149 Ga0495642_0000432 3300046528 Bacteria 22120
150 Ga0495642_0007092 3300046528 Bacteria 4299
151 Ga0495652_0010387 3300046529 Bacteria 8439
152 Ga0495665_0008234 3300046531 Bacteria 5653
153 Ga0495586_0016694 3300046535 Bacteria 3904
154 Ga0495609_0000002 3300046538 Bacteria 739816
155 Ga0495597_0001302 3300046542 Bacteria 18321
156 Ga0495622_0022485 3300046557 Bacteria 2938
157 Ga0495633_0016795 3300046558 Bacteria 3760
158 Ga0495633_0032886 3300046558 Bacteria 2503
159 Ga0495668_0014622 3300046616 Bacteria 4597
160 Ga0495634_0051382 3300046642 Bacteria 2765
161 Ga0495611_0012156 3300046648 Bacteria 3658
162 Ga0495625_0037043 3300046660 Bacteria 3581
163 Ga0495661_0000717 3300046665 Bacteria 32619
164 Ga0495661_0001011 3300046665 Bacteria 25188
165 Ga0495661_0001138 3300046665 Bacteria 23241
166 Ga0495661_0001714 3300046665 Bacteria 17735
167 Ga0495661_0020674 3300046665 Bacteria 4294
168 Ga0495661_0022191 3300046665 Bacteria 4130
169 Ga0495661_0033893 3300046665 Bacteria 3217
170 Ga0495661_0040238 3300046665 Bacteria 2901
171 Ga0495588_0000067 3300046674 Bacteria 238958
172 Ga0495588_0020354 3300046674 Bacteria 3260
173 Ga0495669_0000177 3300046684 Bacteria 40130
174 Ga0495669_0004328 3300046684 Bacteria 5859
175 Ga0495670_0000126 3300046691 Bacteria 33072
176 Ga0495671_0032631 3300046692 Bacteria 2658
177 Ga0495589_0000009 3300046794 Bacteria 256265
178 Ga0495589_0000256 3300046794 Bacteria 43404
179 Ga0495589_0000501 3300046794 Bacteria 27708
180 Ga0495589_0004191 3300046794 Bacteria 7713
181 Ga0495589_0017558 3300046794 Bacteria 3671
182 Ga0495660_0000026 3300046810 Bacteria 256223
183 Ga0495604_0014381 3300047317 Bacteria 6312
184 Ga0495604_0041601 3300047317 Bacteria 3604
185 Ga0495674_0002230 3300047319 Bacteria 19056
186 Ga0495672_0000352 3300047320 Bacteria 58759
187 Ga0495672_0000886 3300047320 Bacteria 31476
188 Ga0495672_0004304 3300047320 Bacteria 11732
189 Ga0495676_0000037 3300047321 Bacteria 115856
190 Ga0495680_0008176 3300047322 Bacteria 9538
191 Ga0495683_0000076 3300047323 Bacteria 97809
192 Ga0495683_0004751 3300047323 Bacteria 7634
193 Ga0495687_000013 3300047443 Bacteria 371058
194 Ga0495687_000064 3300047443 Bacteria 163468
195 Ga0495687_000116 3300047443 Bacteria 122687
196 Ga0495687_000162 3300047443 Bacteria 100599
197 Ga0495687_000593 3300047443 Bacteria 42252
198 Ga0495675_0010534 3300047444 Bacteria 5779
199 Ga0495675_0022782 3300047444 Bacteria 3993
200 Ga0495677_0000142 3300047445 Bacteria 34317
201 Ga0495677_0001295 3300047445 Bacteria 9992
202 Ga0495677_0003269 3300047445 Bacteria 6317
203 Ga0495677_0004086 3300047445 Bacteria 5636
204 Ga0495681_0009044 3300047470 Bacteria 6175
205 Ga0495681_0027657 3300047470 Bacteria 2930
206 Ga0495626_0000786 3300048091 Bacteria 28839
207 Ga0495626_0002070 3300048091 Bacteria 14626
208 Ga0495626_0006363 3300048091 Bacteria 6731
209 Ga0496102_0000302 3300048905 Bacteria 62812
210 Ga0496107_0063717 3300048910 Bacteria 2672
211 Ga0496113_0001323 3300048916 Bacteria 13698
212 Ga0496114_0003073 3300048917 Bacteria 12794
213 Ga0496115_0079666 3300048918 Bacteria 2666
214 Ga0496122_0000248 3300048925 Bacteria 121158
215 Ga0496122_0002307 3300048925 Bacteria 27528
216 Ga0496122_0008689 3300048925 Bacteria 10884
217 Ga0496123_0000122 3300048926 Bacteria 158966
218 Ga0496123_0006928 3300048926 Bacteria 10830
219 Ga0496124_0071554 3300048927 Bacteria 2874
220 Ga0496125_0001501 3300048928 Bacteria 33413
221 Ga0495678_009165 3300049459 Bacteria 4925
222 Ga0501031_0000168 3300049568 Bacteria 37163
223 Ga0501034_0000098 3300049571 Bacteria 160770
224 Ga0501037_0002822 3300049573 Bacteria 12597
225 Ga0501039_0004357 3300049575 Bacteria 10670
226 Ga0501046_0001242 3300049580 Bacteria 24678
227 Ga0501072_0019436 3300049588 Bacteria 5251
228 Ga0501075_0000412 3300049591 Bacteria 24967
229 Ga0501077_0000765 3300049593 Bacteria 19411
230 Ga0501223_001195 3300049663 Bacteria 6087
231 Ga0501080_0001638 3300049742 Bacteria 19048
232 Ga0501035_0024772 3300049822 Bacteria 5501
233 Ga0501044_0002192 3300049823 Bacteria 22408
234 nmdc:mga05p37_134729_c1 3300050507 Bacteria 3030
235 nmdc:mga06r32_79125_c1 3300050510 Bacteria 3197
236 nmdc:mga08y16_23063_c1 3300050511 Bacteria 6571
237 Ga0500650_0000108 3300053098 Bacteria 22785
238 Ga0501082_0000109 3300060353 Bacteria 64214
239 2643798280 2643221556 Bacteria 7251154
240 2644475283 2643221684 Bacteria 7145183
241 2644645227 2643221717 Bacteria 5676132
242 2738731082 2738541278 Bacteria 9755573
243 8047674400 8047673197 Bacteria 7395230
244 Ga0070670_100000018
245 Ga0055525_1000105
246 Ga0070658_10030572
247 Ga0070658_10067440
248 Ga0070676_10019788
249 Ga0070666_10008217
250 Ga0070660_100029607
251 Ga0070661_100014331
252 Ga0070675_100128974
253 Ga0070671_100000084
254 Ga0070671_100023027
255 Ga0070659_100008588
256 Ga0070667_100000002
257 Ga0070713_100047532
258 Ga0070685_10000003
259 Ga0070685_10017099
260 Ga0070707_100113366
261 Ga0070665_100001280
262 Ga0068855_100014615
263 Ga0068855_100016288
264 Ga0070664_100033091
265 Ga0068864_100000002
266 Ga0068860_100000499
267 Ga0081540_1023954
268 Ga0070716_100054572
269 Ga0075428_100005135
270 Ga0075428_100016907
271 Ga0099794_10000035
272 Ga0105240_10000533
273 Ga0105240_10002479
274 Ga0105240_10089346
275 Ga0105240_10154279
276 Ga0105242_10000464
277 Ga0105249_10013365
278 Ga0105239_10001651
279 Ga0105239_10185661
280 Ga0157374_10001631
281 Ga0163163_10001034
282 Ga0157380_10008975
283 Ga0209563_100007
284 Ga0209148_1000476
285 Ga0207710_10006642
286 Ga0207645_10024856
287 Ga0207705_10006888
288 Ga0207695_10000632
289 Ga0207695_10002023
290 Ga0207695_10077642
291 Ga0207657_10056037
292 Ga0207649_10010477
293 Ga0207681_10000509
294 Ga0207650_10000002
295 Ga0207700_10050788
296 Ga0207644_10001002
297 Ga0207644_10035454
298 Ga0207690_10008143
299 Ga0207690_10017092
300 Ga0207686_10000090
301 Ga0207711_10000765
302 Ga0207667_10012901
303 Ga0207667_10019261
304 Ga0207658_10000001
305 Ga0207703_10039090
306 Ga0207676_10000001
307 Ga0209588_1000005
308 Ga0268266_10000525
309 Ga0268266_10010019
310 Ga0268265_10000455
311 Ga0268264_10000004
312 Ga0316177_1192577
313 Ga0316180_1019625
314 Ga0265327_10008811
315 Ga0316575_10000941
316 Ga0307409_100022400
317 Ga0307411_10004377
318 Ga0316593_10020185
319 Ga0316574_0000630
320 Ga0373927_0014320
321 Ga0316584_0012417
322 Ga0316584_0067314
323 Ga0395899_0000028
324 Ga0395900_0015061
325 Ga0395900_0053441
326 Ga0395898_0026568
327 Ga0395905_0011508
328 Ga0395905_0097218
329 Ga0395901_0015889
330 Ga0400484_09557
331 Ga0400484_09595
332 Ga0400484_38473
333 Ga0400483_175791
334 Ga0400487_37292
335 Ga0439448_0000170
336 Ga0466969_0015930
337 Ga0466965_0016521
338 Ga0466966_0001482
339 Ga0466966_0007293
340 Ga0466964_0007231
341 Ga0466964_0013996
342 Ga0466957_0007894
343 Ga0466957_0012826
344 Ga0466960_0009404
345 Ga0466959_0010381
346 Ga0466959_0023654
347 Ga0466967_0024012
348 Ga0495617_000209
349 Ga0495590_0002329
350 Ga0495653_0005273
351 Ga0495653_0030896
352 Ga0495605_0000217
353 Ga0495605_0006219
354 Ga0495605_0012178
355 Ga0495605_0013845
356 Ga0495584_0000008
357 Ga0495584_0000028
358 Ga0495584_0000342
359 Ga0495584_0003861
360 Ga0495584_0009017
361 Ga0495584_0018443
362 Ga0495584_0048141
363 Ga0495585_0000086
364 Ga0495585_0000139
365 Ga0495585_0000285
366 Ga0495585_0022530
367 Ga0495596_0000528
368 Ga0495596_0000958
369 Ga0495607_0001072
370 Ga0495607_0004925
371 Ga0495583_0000213
372 Ga0495583_0000466
373 Ga0495583_0010515
374 Ga0495583_0031672
375 Ga0495616_0000144
376 Ga0495616_0009061
377 Ga0495616_0011279
378 Ga0495616_0030902
379 Ga0495616_0035036
380 Ga0495616_0036336
381 Ga0495631_0001611
382 Ga0495632_0001162
383 Ga0495632_0006291
384 Ga0495643_0002351
385 Ga0495643_0003610
386 Ga0495644_0001450
387 Ga0495648_0000030
388 Ga0495648_0013668
389 Ga0495648_0024201
390 Ga0495663_0003870
391 Ga0495663_0004629
392 Ga0495642_0000432
393 Ga0495642_0007092
394 Ga0495652_0010387
395 Ga0495665_0008234
396 Ga0495586_0016694
397 Ga0495609_0000002
398 Ga0495597_0001302
399 Ga0495622_0022485
400 Ga0495633_0016795
401 Ga0495633_0032886
402 Ga0495668_0014622
403 Ga0495634_0051382
404 Ga0495611_0012156
405 Ga0495625_0037043
406 Ga0495661_0000717
407 Ga0495661_0001011
408 Ga0495661_0001138
409 Ga0495661_0001714
410 Ga0495661_0020674
411 Ga0495661_0022191
412 Ga0495661_0033893
413 Ga0495661_0040238
414 Ga0495588_0000067
415 Ga0495588_0020354
416 Ga0495669_0000177
417 Ga0495669_0004328
418 Ga0495670_0000126
419 Ga0495671_0032631
420 Ga0495589_0000009
421 Ga0495589_0000256
422 Ga0495589_0000501
423 Ga0495589_0004191
424 Ga0495589_0017558
425 Ga0495660_0000026
426 Ga0495604_0014381
427 Ga0495604_0041601
428 Ga0495674_0002230
429 Ga0495672_0000352
430 Ga0495672_0000886
431 Ga0495672_0004304
432 Ga0495676_0000037
433 Ga0495680_0008176
434 Ga0495683_0000076
435 Ga0495683_0004751
436 Ga0495687_000013
437 Ga0495687_000064
438 Ga0495687_000116
439 Ga0495687_000162
440 Ga0495687_000593
441 Ga0495675_0010534
442 Ga0495675_0022782
443 Ga0495677_0000142
444 Ga0495677_0001295
445 Ga0495677_0003269
446 Ga0495677_0004086
447 Ga0495681_0009044
448 Ga0495681_0027657
449 Ga0495626_0000786
450 Ga0495626_0002070
451 Ga0495626_0006363
452 Ga0496102_0000302
453 Ga0496107_0063717
454 Ga0496113_0001323
455 Ga0496114_0003073
456 Ga0496115_0079666
457 Ga0496122_0000248
458 Ga0496122_0002307
459 Ga0496122_0008689
460 Ga0496123_0000122
461 Ga0496123_0006928
462 Ga0496124_0071554
463 Ga0496125_0001501
464 Ga0495678_009165
465 Ga0501031_0000168
466 Ga0501034_0000098
467 Ga0501037_0002822
468 Ga0501039_0004357
469 Ga0501046_0001242
470 Ga0501072_0019436
471 Ga0501075_0000412
472 Ga0501077_0000765
473 Ga0501223_001195
474 Ga0501080_0001638
475 Ga0501035_0024772
476 Ga0501044_0002192
477 nmdc:mga05p37_134729_c1
478 nmdc:mga06r32_79125_c1
479 nmdc:mga08y16_23063_c1
480 Ga0500650_0000108
481 Ga0501082_0000109
482 2643798280
483 2644475283
484 2644645227
485 2738731082
486 8047674400

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF16861

Carbam_trans_C

Carbamoyltransferase C-terminus

443

632

0.99

PF02543

Carbam_trans_N

Carbamoyltransferase N-terminus

36

381

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
7vzq-assembly1.cif.gz_A the structure of gdmn v24y/g157a/r158a/g188r mutant in complex with carbamoyl adenylate intermediate 0.8889 4 609
7vzu-assembly1.cif.gz_A the structure of gdmn y82f mutant 0.8833 4 609
7vx0-assembly1.cif.gz_B the structure of gdmn complex with atp 0.8809 4 609
7xb6-assembly4.cif.gz_D crystal structure of the o-carbamoyltransferase vtdb in complex with carbamoyl adenylate intermediate 0.8462 4 605
7xb6-assembly4.cif.gz_D crystal structure of the o-carbamoyltransferase vtdb in complex with carbamoyl adenylate intermediate 0.8435 4 605
ID Description Score Start End Superfamily
3vewA03 Alpha Beta;Alpha-Beta Complex;DHBP synthase;Carbamoyltransferase, C-terminal domain 0.9432 376 599 3.90.870.20
af_Q58451_301_510_3.90.870.20 Alpha Beta;Alpha-Beta Complex;DHBP synthase;Carbamoyltransferase, C-terminal domain 0.9185 374 598 3.90.870.20
af_Q58458_398_606_3.90.870.20 Alpha Beta;Alpha-Beta Complex;DHBP synthase;Carbamoyltransferase, C-terminal domain 0.9143 374 598 3.90.870.20
3vewA03 Alpha Beta;Alpha-Beta Complex;DHBP synthase;Carbamoyltransferase, C-terminal domain 0.9075 376 599 3.90.870.20
3veoA01 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.8914 3 79 3.30.420.40
ID Description Score Start End GO Terms
AF-A0A2E5EK92-F1-model_v4 Carbamoyltransferase domain-containing protein 0.9801 1 67 GO:0003824
GO:0009058
AF-A0A2E8AZT3-F1-model_v4 Carbamoyltransferase 0.9789 2 611 GO:0003824
GO:0009058
AF-A0A2E8B268-F1-model_v4 Carbamoyltransferase 0.9732 1 620 GO:0003824
GO:0009058
AF-A0A1V4XRV0-F1-model_v4 Decarbamoylnovobiocin carbamoyltransferase (EC 2.1.3.12) 0.9724 4 620 GO:0009058
GO:0016740
AF-B7AUH0-F1-model_v4 Carbamoyltransferase 0.9717 4 620 GO:0003824
GO:0009058

Map