F355381
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 243 | 177 | 486 | 422 |
Family's Representative Sequence
| Representative Sequence | 3300005445|Ga0070708_100052620|Ga0070708_1000526203 |
| Length | 484 |
| Sequence | LPNLAFEVCRLSCSTTESVAGIDDSDQARPFRGPGSYWRVSNSGVSGSFCSNYASMDQFRILGGGRLTGRIKVGGAKNSALPCLAASLLTADTVTLHNVPHVRDLITMRWLLQDLGARVLVPVLHTLRINSTAVEMFEARYELVKTMRASVLVLGPLIARFGQARVSLPGGCAIGQRPIDLHLSALEKMGASIQLRSGAVEATASRLRGAEISFEMVSVTGTENVLMAATLASGTTRILNAACEPEVVDLAELLIKMGAKIEGAGSSVITIQGVADLSGAEHQIIADRIETGTLAVAAAITMGDLSIEDCNPSHLQAVIEKLRLAGVEIDTEGDTGFHVACRRQLQATSITTEVYPGFPTDMQAQYMTLMTQAHGESEINETIFENRYMHVGELLRLGAQIQVNGHQAAVDGPTPLTGARVMASDLRASASLVLAGLVAEGETWVERVYHIDRGYEQIEKKLISVGAKIERVKSRSSMEVDQRG |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Metagenome | Rhizosphere |
| 2 | 3300003187 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB | Metagenome | Endosphere |
| 3 | 3300003751 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 | Metagenome | Endosphere |
| 4 | 3300003775 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 | Metagenome | Endosphere |
| 5 | 3300003781 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 | Metagenome | Endosphere |
| 6 | 3300003784 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 | Metagenome | Endosphere |
| 7 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005328 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005330 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG | Metagenome | Rhizosphere |
| 10 | 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005406 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG | Metagenome | Rhizosphere |
| 13 | 3300005434 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG | Metagenome | Rhizosphere |
| 14 | 3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005440 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Metagenome | Rhizosphere |
| 17 | 3300005444 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG | Metagenome | Rhizosphere |
| 18 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 20 | 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Metagenome | Rhizosphere |
| 21 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 22 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 23 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 24 | 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Metagenome | Rhizosphere |
| 25 | 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Metagenome | Rhizosphere |
| 26 | 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Metagenome | Rhizosphere |
| 27 | 3300005545 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG | Metagenome | Rhizosphere |
| 28 | 3300005546 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG | Metagenome | Rhizosphere |
| 29 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 30 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 31 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 32 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 33 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 34 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 35 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 36 | 3300006173 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG | Metagenome | Rhizosphere |
| 37 | 3300006178 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 | Metagenome | Endosphere |
| 38 | 3300006195 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 | Metagenome | Endosphere |
| 39 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 40 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 41 | 3300006852 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Metagenome | Rhizosphere |
| 42 | 3300006871 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Metagenome | Rhizosphere |
| 43 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 44 | 3300006914 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 | Metagenome | Rhizosphere |
| 45 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300006948 | Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 | Metagenome | Nodule |
| 47 | 3300007076 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 | Metagenome | Rhizosphere |
| 48 | 3300007265 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 | Metagenome | Rhizosphere |
| 49 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 52 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 53 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 54 | 3300025263 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 55 | 3300025273 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 56 | 3300025291 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 57 | 3300025292 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 58 | 3300025294 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 59 | 3300025295 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 60 | 3300025297 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) | Metagenome | Endosphere |
| 61 | 3300025299 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 62 | 3300025885 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025906 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025939 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300027666 | Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) | Metagenome | Nodule |
| 81 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 82 | 3300028653 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG | Metagenome | Rhizosphere |
| 83 | 3300028666 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG | Metagenome | Rhizosphere |
| 84 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 85 | 3300031250 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG | Metagenome | Rhizosphere |
| 86 | 3300031665 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 | Metagenome | Rhizosphere |
| 87 | 3300032168 | Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 88 | 3300036712 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA | Metagenome | Rhizosphere |
| 89 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 90 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 91 | 3300038726 | Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 | Metagenome | Unclassified |
| 92 | 3300039093 | Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 | Metagenome | Unclassified |
| 93 | 3300041997 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 | Metagenome | Rhizosphere |
| 94 | 3300042436 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 | Metagenome | Rhizosphere |
| 95 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 96 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 97 | 3300044673 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED | Metagenome | Rhizosphere |
| 98 | 3300044706 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R | Metagenome | Rhizosphere |
| 99 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 100 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 101 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 102 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 103 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 104 | 3300046474 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300046501 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300046512 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300046513 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300046538 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300046557 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere | Metagenome | Rhizosphere |
| 111 | 3300046648 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300046692 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300046694 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere | Metagenome | Rhizosphere |
| 114 | 3300046794 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere | Metagenome | Rhizosphere |
| 115 | 3300047320 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300047323 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere | Metagenome | Rhizosphere |
| 117 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 118 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 119 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 120 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 121 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 122 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 123 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 124 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 125 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 126 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 127 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 128 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 129 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 130 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 131 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 132 | 3300049591 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 | Metagenome | Rhizosphere |
| 133 | 3300049592 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 | Metagenome | Rhizosphere |
| 134 | 3300049741 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 | Metagenome | Rhizosphere |
| 135 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 136 | 3300049743 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 | Metagenome | Rhizosphere |
| 137 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 138 | 3300049824 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 139 | 3300050491 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation | Metagenome | Endosphere |
| 140 | 3300050493 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation | Metagenome | Endosphere |
| 141 | 3300050494 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation | Metagenome | Endosphere |
| 142 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 143 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 144 | 3300050509 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation | Metagenome | Rhizosphere |
| 145 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 146 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 147 | 3300050512 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation | Metagenome | Rhizosphere |
| 148 | 3300050513 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation | Metagenome | Rhizosphere |
| 149 | 3300050514 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation | Metagenome | Rhizosphere |
| 150 | 3300050515 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation | Metagenome | Rhizosphere |
| 151 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 152 | 3300053178 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere | Metagenome | Endosphere |
| 153 | 3300054114 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 | Metagenome | Rhizosphere |
| 154 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
| 155 | 2501025501 | Paraburkholderia silvatlantica PVA5 | Isolate | Unclassified |
| 156 | 2501025504 | Paraburkholderia silvatlantica SRMrh-20 | Isolate | Unclassified |
| 157 | 2510917014 | Paraburkholderia silvatlantica SRMrh-20 | Isolate | Unclassified |
| 158 | 2510917015 | Paraburkholderia silvatlantica PVA5 | Isolate | Unclassified |
| 159 | 2513237150 | Cupriavidus taiwanensis STM6018 | Isolate | Nodule |
| 160 | 2513237151 | Burkholderia sp. WSM2230 | Isolate | Nodule |
| 161 | 2513237165 | Cupriavidus neocaledonicus STM6070 | Isolate | Nodule |
| 162 | 2513237166 | Paraburkholderia azotifigens UYPR1.413 | Isolate | Nodule |
| 163 | 2522572158 | Azospirillum halopraeferens DSM 3675 | Isolate | Unclassified |
| 164 | 2562617112 | Burkholderia sp. BT03 | Isolate | Rhizosphere |
| 165 | 2643221603 | Noviherbaspirillum sp. Root189 | Isolate | Unclassified |
| 166 | 2711768613 | Burkholderia sp. BT03 | Isolate | Rhizosphere |
| 167 | 2786546517 | Verrucomicrobia bacterium LW23 | Isolate | Rhizoplane |
| 168 | 2791355137 | Paraburkholderia piptadeniae STM7183 | Isolate | Unclassified |
| 169 | 2834641062 | Cupriavidus gilardii JZ4 | Isolate | Unclassified |
| 170 | 2858688981 | Cupriavidus sp. UYMMa02A | Isolate | Unclassified |
| 171 | 2919046199 | Herbaspirillum frisingense 596 | Isolate | Unclassified |
| 172 | 2921643360 | Paraburkholderia steynii HC1.1ba | Isolate | Nodule |
| 173 | 642555112 | Paraburkholderia phymatum STM815 | Isolate | Nodule |
| 174 | 644736347 | Cupriavidus taiwanensis LMG 19424 | Isolate | Nodule |
| 175 | 646564506 | Arcobacter nitrofigilis DSM 7299 | Isolate | Unclassified |
| 176 | 8003400568 | Cupriavidus gilardii USM5 | Isolate | Rhizosphere |
| 177 | 8048746797 | Alcaligenes endophyticus DSM 100498 | Isolate | Unclassified |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 90.12 |
| Metatranscriptomes | 0.41 |
| Isolates | 9.47 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 13.58 |
| Nodule | 3.7 |
| Rhizoplane | 0.82 |
| Rhizosphere | 74.49 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0.41 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0070708_100052620 | 3300005445 | Bacteria | 3611 |
| 2 | JGI25151J46595_10001594 | 3300003187 | Bacteria | 15066 |
| 3 | JGI25151J46595_10004715 | 3300003187 | Bacteria | 7166 |
| 4 | Ga0055538_1000038 | 3300003751 | Bacteria | 186588 |
| 5 | Ga0055524_1000669 | 3300003775 | Bacteria | 24026 |
| 6 | Ga0055524_1021927 | 3300003775 | Bacteria | 2102 |
| 7 | Ga0055536_1000176 | 3300003781 | Bacteria | 53490 |
| 8 | Ga0055534_1000940 | 3300003784 | Bacteria | 12980 |
| 9 | Ga0055534_1001271 | 3300003784 | Bacteria | 10271 |
| 10 | Ga0070658_10006355 | 3300005327 | Bacteria | 9576 |
| 11 | Ga0070658_10014011 | 3300005327 | Bacteria | 6437 |
| 12 | Ga0070676_10076246 | 3300005328 | Bacteria | 2024 |
| 13 | Ga0070690_100041017 | 3300005330 | Bacteria | 2929 |
| 14 | Ga0070669_100016593 | 3300005353 | Bacteria | 5257 |
| 15 | Ga0070674_100067116 | 3300005356 | Bacteria | 2522 |
| 16 | Ga0070703_10000187 | 3300005406 | Bacteria | 30058 |
| 17 | Ga0070709_10000603 | 3300005434 | Bacteria | 20947 |
| 18 | Ga0070711_100000030 | 3300005439 | Bacteria | 100932 |
| 19 | Ga0070705_100001264 | 3300005440 | Bacteria | 13644 |
| 20 | Ga0070700_100006560 | 3300005441 | Bacteria | 6228 |
| 21 | Ga0070694_100075314 | 3300005444 | Bacteria | 2334 |
| 22 | Ga0070663_100016934 | 3300005455 | Bacteria | 4744 |
| 23 | Ga0070678_100149695 | 3300005456 | Bacteria | 1879 |
| 24 | Ga0068867_100005989 | 3300005459 | Bacteria | 8622 |
| 25 | Ga0070706_100000070 | 3300005467 | Bacteria | 118491 |
| 26 | Ga0070706_100063163 | 3300005467 | Bacteria | 3422 |
| 27 | Ga0070706_100149643 | 3300005467 | Bacteria | 2179 |
| 28 | Ga0070707_100000217 | 3300005468 | Bacteria | 57586 |
| 29 | Ga0070707_100019290 | 3300005468 | Bacteria | 6422 |
| 30 | Ga0070698_100004329 | 3300005471 | Bacteria | 15604 |
| 31 | Ga0070699_100000369 | 3300005518 | Bacteria | 44023 |
| 32 | Ga0070699_100021512 | 3300005518 | Bacteria | 5562 |
| 33 | Ga0070697_100039574 | 3300005536 | Bacteria | 3812 |
| 34 | Ga0070672_100070562 | 3300005543 | Bacteria | 2776 |
| 35 | Ga0070695_100180714 | 3300005545 | Bacteria | 1494 |
| 36 | Ga0070696_100000080 | 3300005546 | Bacteria | 47606 |
| 37 | Ga0070696_100016664 | 3300005546 | Bacteria | 4954 |
| 38 | Ga0068857_100028973 | 3300005577 | Bacteria | 4887 |
| 39 | Ga0068854_100007750 | 3300005578 | Bacteria | 6865 |
| 40 | Ga0068859_100034460 | 3300005617 | Bacteria | 5081 |
| 41 | Ga0068863_100083439 | 3300005841 | Bacteria | 3028 |
| 42 | Ga0068858_100011953 | 3300005842 | Bacteria | 8181 |
| 43 | Ga0068860_100037885 | 3300005843 | Bacteria | 4615 |
| 44 | Ga0081539_10025222 | 3300005985 | Bacteria | 3835 |
| 45 | Ga0070716_100038109 | 3300006173 | Bacteria | 2660 |
| 46 | Ga0075367_10013310 | 3300006178 | Bacteria | 4418 |
| 47 | Ga0075367_10120291 | 3300006178 | Bacteria | 1618 |
| 48 | Ga0075366_10007414 | 3300006195 | Bacteria | 6058 |
| 49 | Ga0075428_100030296 | 3300006844 | Bacteria | 5985 |
| 50 | Ga0075428_100079870 | 3300006844 | Bacteria | 3570 |
| 51 | Ga0075431_100007690 | 3300006847 | Bacteria | 10732 |
| 52 | Ga0075433_10101209 | 3300006852 | Bacteria | 2551 |
| 53 | Ga0075433_10110608 | 3300006852 | Bacteria | 2438 |
| 54 | Ga0075433_10142584 | 3300006852 | Bacteria | 2130 |
| 55 | Ga0075434_100052342 | 3300006871 | Bacteria | 4057 |
| 56 | Ga0075434_100362249 | 3300006871 | Bacteria | 1471 |
| 57 | Ga0075429_100006943 | 3300006880 | Bacteria | 9838 |
| 58 | Ga0075429_100090559 | 3300006880 | Bacteria | 2668 |
| 59 | Ga0075436_100000288 | 3300006914 | Bacteria | 31977 |
| 60 | Ga0075436_100066936 | 3300006914 | Bacteria | 2483 |
| 61 | Ga0097620_100034460 | 3300006931 | Bacteria | 5081 |
| 62 | Ga0099826_10000024 | 3300006948 | Bacteria | 148974 |
| 63 | Ga0075435_100252269 | 3300007076 | Bacteria | 1502 |
| 64 | Ga0099794_10003043 | 3300007265 | Bacteria | 6334 |
| 65 | Ga0111539_10000372 | 3300009094 | Bacteria | 55540 |
| 66 | Ga0111539_10062186 | 3300009094 | Bacteria | 4421 |
| 67 | Ga0114129_10015295 | 3300009147 | Bacteria | 10919 |
| 68 | Ga0114129_10033065 | 3300009147 | Bacteria | 7309 |
| 69 | Ga0114129_10055245 | 3300009147 | Bacteria | 5566 |
| 70 | Ga0114129_10115832 | 3300009147 | Bacteria | 3693 |
| 71 | Ga0114129_10508401 | 3300009147 | Bacteria | 1572 |
| 72 | Ga0105249_10084878 | 3300009553 | Bacteria | 2949 |
| 73 | Ga0157375_10214639 | 3300013308 | Bacteria | 2082 |
| 74 | Ga0157380_10026281 | 3300014326 | Bacteria | 4419 |
| 75 | Ga0157380_10073478 | 3300014326 | Bacteria | 2773 |
| 76 | Ga0209565_1000727 | 3300025263 | Bacteria | 19804 |
| 77 | Ga0209565_1004748 | 3300025263 | Bacteria | 4079 |
| 78 | Ga0209673_1016805 | 3300025273 | Bacteria | 2721 |
| 79 | Ga0209675_1000684 | 3300025291 | Bacteria | 23603 |
| 80 | Ga0209675_1001176 | 3300025291 | Bacteria | 15864 |
| 81 | Ga0209676_1000331 | 3300025292 | Bacteria | 90857 |
| 82 | Ga0209025_1000485 | 3300025294 | Bacteria | 76825 |
| 83 | Ga0209025_1000823 | 3300025294 | Bacteria | 49464 |
| 84 | Ga0209025_1000853 | 3300025294 | Bacteria | 48270 |
| 85 | Ga0209025_1001173 | 3300025294 | Bacteria | 37118 |
| 86 | Ga0209564_1001559 | 3300025295 | Bacteria | 22537 |
| 87 | Ga0209564_1004745 | 3300025295 | Bacteria | 8132 |
| 88 | Ga0209564_1004809 | 3300025295 | Bacteria | 8042 |
| 89 | Ga0209758_1013994 | 3300025297 | Bacteria | 4312 |
| 90 | Ga0209256_1000612 | 3300025299 | Bacteria | 49490 |
| 91 | Ga0209256_1000802 | 3300025299 | Bacteria | 40206 |
| 92 | Ga0207653_10000013 | 3300025885 | Bacteria | 159236 |
| 93 | Ga0207699_10000007 | 3300025906 | Bacteria | 405928 |
| 94 | Ga0207684_10000037 | 3300025910 | Bacteria | 284224 |
| 95 | Ga0207684_10001850 | 3300025910 | Bacteria | 22029 |
| 96 | Ga0207684_10059205 | 3300025910 | Bacteria | 3252 |
| 97 | Ga0207684_10061779 | 3300025910 | Bacteria | 3181 |
| 98 | Ga0207663_10000008 | 3300025916 | Bacteria | 205803 |
| 99 | Ga0207646_10000409 | 3300025922 | Bacteria | 57577 |
| 100 | Ga0207646_10013314 | 3300025922 | Bacteria | 7869 |
| 101 | Ga0207646_10015890 | 3300025922 | Bacteria | 7079 |
| 102 | Ga0207681_10018658 | 3300025923 | Bacteria | 4373 |
| 103 | Ga0207681_10040094 | 3300025923 | Bacteria | 3114 |
| 104 | Ga0207709_10095805 | 3300025935 | Bacteria | 1951 |
| 105 | Ga0207665_10045420 | 3300025939 | Bacteria | 2941 |
| 106 | Ga0207665_10132146 | 3300025939 | Unclassified | 1773 |
| 107 | Ga0207691_10005158 | 3300025940 | Bacteria | 12613 |
| 108 | Ga0207689_10037210 | 3300025942 | Bacteria | 4037 |
| 109 | Ga0207712_10119352 | 3300025961 | Bacteria | 1992 |
| 110 | Ga0207640_10067222 | 3300025981 | Bacteria | 2397 |
| 111 | Ga0207703_10078543 | 3300026035 | Bacteria | 2742 |
| 112 | Ga0207678_10017081 | 3300026067 | Bacteria | 6372 |
| 113 | Ga0207641_10074001 | 3300026088 | Bacteria | 2937 |
| 114 | Ga0207648_10000760 | 3300026089 | Bacteria | 36174 |
| 115 | Ga0207674_10020996 | 3300026116 | Bacteria | 7043 |
| 116 | Ga0207683_10117836 | 3300026121 | Bacteria | 2381 |
| 117 | Ga0209282_1000032 | 3300027666 | Bacteria | 149218 |
| 118 | Ga0207428_10000117 | 3300027907 | Bacteria | 107832 |
| 119 | Ga0207428_10139172 | 3300027907 | Bacteria | 1854 |
| 120 | Ga0207428_10215885 | 3300027907 | Bacteria | 1440 |
| 121 | Ga0265323_10018369 | 3300028653 | Bacteria | 2706 |
| 122 | Ga0265336_10002767 | 3300028666 | Bacteria | 7083 |
| 123 | Ga0265338_10000508 | 3300028800 | Bacteria | 68840 |
| 124 | Ga0265331_10065063 | 3300031250 | Bacteria | 1715 |
| 125 | Ga0316575_10000119 | 3300031665 | Bacteria | 19810 |
| 126 | Ga0316593_10033863 | 3300032168 | Bacteria | 1674 |
| 127 | Ga0316584_0167552 | 3300036712 | Bacteria | 1631 |
| 128 | Ga0395900_0079101 | 3300037418 | Bacteria | 3378 |
| 129 | Ga0395905_0000166 | 3300037471 | Bacteria | 108507 |
| 130 | Ga0395905_0002893 | 3300037471 | Bacteria | 18759 |
| 131 | Ga0400490_60761 | 3300038726 | Bacteria | 2509 |
| 132 | Ga0400489_59876 | 3300039093 | Bacteria | 3458 |
| 133 | Ga0439431_0016187 | 3300041997 | Bacteria | 1743 |
| 134 | Ga0439435_0000145 | 3300042436 | Bacteria | 9631 |
| 135 | Ga0451577_0003415 | 3300042876 | Bacteria | 17713 |
| 136 | Ga0451577_0009150 | 3300042876 | Bacteria | 9555 |
| 137 | Ga0451577_0018971 | 3300042876 | Bacteria | 6332 |
| 138 | Ga0451577_0019825 | 3300042876 | Bacteria | 6178 |
| 139 | Ga0466972_0000290 | 3300044658 | Bacteria | 30636 |
| 140 | Ga0453683_0062877 | 3300044673 | Bacteria | 2321 |
| 141 | Ga0466964_0053618 | 3300044706 | Bacteria | 1660 |
| 142 | Ga0453684_0002093 | 3300044712 | Bacteria | 50497 |
| 143 | Ga0453684_0003780 | 3300044712 | Bacteria | 33449 |
| 144 | Ga0453684_0027697 | 3300044712 | Bacteria | 8113 |
| 145 | Ga0453684_0076643 | 3300044712 | Bacteria | 4197 |
| 146 | Ga0466970_0072366 | 3300044765 | Bacteria | 1854 |
| 147 | Ga0466957_0006160 | 3300044842 | Bacteria | 6773 |
| 148 | Ga0466959_0025178 | 3300045049 | Bacteria | 4408 |
| 149 | Ga0451576_0000013 | 3300045051 | Bacteria | 665120 |
| 150 | Ga0451576_0041017 | 3300045051 | Bacteria | 4894 |
| 151 | Ga0495605_0001384 | 3300046474 | Bacteria | 15959 |
| 152 | Ga0495607_0039916 | 3300046501 | Bacteria | 2799 |
| 153 | Ga0495610_0002561 | 3300046512 | Bacteria | 15121 |
| 154 | Ga0495616_0008291 | 3300046513 | Bacteria | 6167 |
| 155 | Ga0495628_0125630 | 3300046516 | Bacteria | 1965 |
| 156 | Ga0495609_0007989 | 3300046538 | Bacteria | 5225 |
| 157 | Ga0495622_0001902 | 3300046557 | Bacteria | 10270 |
| 158 | Ga0495611_0009522 | 3300046648 | Bacteria | 4106 |
| 159 | Ga0495671_0001606 | 3300046692 | Bacteria | 14869 |
| 160 | Ga0495649_0013173 | 3300046694 | Bacteria | 4777 |
| 161 | Ga0495589_0035530 | 3300046794 | Bacteria | 2499 |
| 162 | Ga0495672_0011217 | 3300047320 | Bacteria | 6335 |
| 163 | Ga0495672_0074252 | 3300047320 | Bacteria | 1916 |
| 164 | Ga0495683_0037005 | 3300047323 | Bacteria | 2476 |
| 165 | Ga0496109_0000026 | 3300048912 | Bacteria | 171405 |
| 166 | Ga0496116_0035630 | 3300048919 | Bacteria | 3492 |
| 167 | Ga0496121_0081145 | 3300048924 | Bacteria | 2568 |
| 168 | Ga0496122_0012773 | 3300048925 | Bacteria | 8311 |
| 169 | Ga0496123_0005248 | 3300048926 | Bacteria | 13151 |
| 170 | Ga0501031_0048775 | 3300049568 | Bacteria | 2759 |
| 171 | Ga0501032_0010987 | 3300049569 | Bacteria | 6509 |
| 172 | Ga0501033_0000668 | 3300049570 | Bacteria | 31668 |
| 173 | Ga0501034_0000134 | 3300049571 | Bacteria | 137745 |
| 174 | Ga0501034_0005349 | 3300049571 | Bacteria | 14062 |
| 175 | Ga0501034_0121529 | 3300049571 | Bacteria | 2598 |
| 176 | Ga0501034_0260096 | 3300049571 | Bacteria | 1678 |
| 177 | Ga0501036_0001501 | 3300049572 | Bacteria | 17997 |
| 178 | Ga0501037_0004363 | 3300049573 | Bacteria | 10269 |
| 179 | Ga0501038_0058343 | 3300049574 | Bacteria | 3309 |
| 180 | Ga0501038_0080833 | 3300049574 | Bacteria | 2739 |
| 181 | Ga0501043_0006325 | 3300049579 | Bacteria | 9511 |
| 182 | Ga0501046_0001989 | 3300049580 | Bacteria | 19418 |
| 183 | Ga0501047_0060418 | 3300049581 | Bacteria | 3658 |
| 184 | Ga0501075_0195412 | 3300049591 | Bacteria | 1543 |
| 185 | Ga0501076_0066802 | 3300049592 | Bacteria | 2871 |
| 186 | Ga0501076_0084338 | 3300049592 | Bacteria | 2552 |
| 187 | Ga0501079_0037366 | 3300049741 | Bacteria | 3743 |
| 188 | Ga0501080_0299291 | 3300049742 | Bacteria | 1459 |
| 189 | Ga0501081_0300810 | 3300049743 | Bacteria | 1177 |
| 190 | Ga0501044_0038183 | 3300049823 | Bacteria | 5016 |
| 191 | Ga0501044_0138006 | 3300049823 | Bacteria | 2428 |
| 192 | Ga0501044_0148892 | 3300049823 | Bacteria | 2324 |
| 193 | Ga0501045_0040527 | 3300049824 | Bacteria | 3388 |
| 194 | nmdc:mga00v17_11738_c1 | 3300050491 | Bacteria | 4819 |
| 195 | nmdc:mga00v17_67234_c1 | 3300050491 | Bacteria | 2214 |
| 196 | nmdc:mga0k408_1572_c1 | 3300050493 | Bacteria | 12331 |
| 197 | nmdc:mga06z11_1314_c1 | 3300050494 | Bacteria | 9188 |
| 198 | nmdc:mga05p37_21798_c1 | 3300050507 | Bacteria | 7761 |
| 199 | nmdc:mga05p37_28_c1 | 3300050507 | Bacteria | 114869 |
| 200 | nmdc:mga05p37_359490_c1 | 3300050507 | Bacteria | 1712 |
| 201 | nmdc:mga05p37_416628_c1 | 3300050507 | Bacteria | 1564 |
| 202 | nmdc:mga05p37_65266_c1 | 3300050507 | Bacteria | 4479 |
| 203 | nmdc:mga09592_5698_c1 | 3300050508 | Bacteria | 10160 |
| 204 | nmdc:mga0qj67_194234_c1 | 3300050509 | Bacteria | 1649 |
| 205 | nmdc:mga06r32_4034_c1 | 3300050510 | Bacteria | 13166 |
| 206 | nmdc:mga08y16_1885_c1 | 3300050511 | Bacteria | 21345 |
| 207 | nmdc:mga08y16_48618_c1 | 3300050511 | Bacteria | 4439 |
| 208 | nmdc:mga0n895_24637_c1 | 3300050512 | Bacteria | 5673 |
| 209 | nmdc:mga0n895_330288_c1 | 3300050512 | Bacteria | 1545 |
| 210 | nmdc:mga0n895_70511_c1 | 3300050512 | Bacteria | 3464 |
| 211 | nmdc:mga0rr50_121212_c1 | 3300050513 | Bacteria | 2082 |
| 212 | nmdc:mga0rr50_285009_c1 | 3300050513 | Bacteria | 1379 |
| 213 | nmdc:mga08x19_11_c1 | 3300050514 | Bacteria | 403007 |
| 214 | nmdc:mga0a205_215424_c1 | 3300050515 | Bacteria | 1807 |
| 215 | nmdc:mga0a205_88545_c1 | 3300050515 | Bacteria | 2992 |
| 216 | Ga0500616_0000642 | 3300053153 | Bacteria | 42060 |
| 217 | Ga0500637_0021136 | 3300053178 | Bacteria | 3533 |
| 218 | Ga0501084_0031579 | 3300054114 | Bacteria | 4427 |
| 219 | Ga0501084_0042110 | 3300054114 | Bacteria | 3820 |
| 220 | Ga0501082_0042754 | 3300060353 | Bacteria | 3906 |
| 221 | 2501075051 | 2501025501 | Bacteria | 7768574 |
| 222 | 2501412750 | 2501025504 | Bacteria | 8008976 |
| 223 | 2511099832 | 2510917014 | Bacteria | 8296963 |
| 224 | 2511102397 | 2510917015 | Bacteria | 7950052 |
| 225 | 2513956683 | 2513237150 | Bacteria | 6553639 |
| 226 | 2513962658 | 2513237151 | Bacteria | 6309801 |
| 227 | 2514044487 | 2513237165 | Bacteria | 6771773 |
| 228 | 2514050842 | 2513237166 | Bacteria | 10373764 |
| 229 | 2523103623 | 2522572158 | Bacteria | 6514390 |
| 230 | 2563061587 | 2562617112 | Bacteria | 10918404 |
| 231 | 2644027011 | 2643221603 | Bacteria | 6147767 |
| 232 | 2713478547 | 2711768613 | Bacteria | 11048459 |
| 233 | 2787437286 | 2786546517 | Bacteria | 6614109 |
| 234 | 2792837009 | 2791355137 | Bacteria | 9654227 |
| 235 | 2834642560 | 2834641062 | Bacteria | 5559922 |
| 236 | 2858694351 | 2858688981 | Bacteria | 8184122 |
| 237 | 2919049063 | 2919046199 | Bacteria | 5567169 |
| 238 | 2921647673 | 2921643360 | Bacteria | 11448031 |
| 239 | 642594557 | 642555112 | Bacteria | 8676562 |
| 240 | 644749194 | 644736347 | Bacteria | 6476522 |
| 241 | 646814495 | 646564506 | Bacteria | 3192235 |
| 242 | 8003402206 | 8003400568 | Bacteria | 5535898 |
| 243 | 8048747537 | 8048746797 | Bacteria | 3557226 |
| 244 | Ga0070708_100052620 | |||
| 245 | JGI25151J46595_10001594 | |||
| 246 | JGI25151J46595_10004715 | |||
| 247 | Ga0055538_1000038 | |||
| 248 | Ga0055524_1000669 | |||
| 249 | Ga0055524_1021927 | |||
| 250 | Ga0055536_1000176 | |||
| 251 | Ga0055534_1000940 | |||
| 252 | Ga0055534_1001271 | |||
| 253 | Ga0070658_10006355 | |||
| 254 | Ga0070658_10014011 | |||
| 255 | Ga0070676_10076246 | |||
| 256 | Ga0070690_100041017 | |||
| 257 | Ga0070669_100016593 | |||
| 258 | Ga0070674_100067116 | |||
| 259 | Ga0070703_10000187 | |||
| 260 | Ga0070709_10000603 | |||
| 261 | Ga0070711_100000030 | |||
| 262 | Ga0070705_100001264 | |||
| 263 | Ga0070700_100006560 | |||
| 264 | Ga0070694_100075314 | |||
| 265 | Ga0070663_100016934 | |||
| 266 | Ga0070678_100149695 | |||
| 267 | Ga0068867_100005989 | |||
| 268 | Ga0070706_100000070 | |||
| 269 | Ga0070706_100063163 | |||
| 270 | Ga0070706_100149643 | |||
| 271 | Ga0070707_100000217 | |||
| 272 | Ga0070707_100019290 | |||
| 273 | Ga0070698_100004329 | |||
| 274 | Ga0070699_100000369 | |||
| 275 | Ga0070699_100021512 | |||
| 276 | Ga0070697_100039574 | |||
| 277 | Ga0070672_100070562 | |||
| 278 | Ga0070695_100180714 | |||
| 279 | Ga0070696_100000080 | |||
| 280 | Ga0070696_100016664 | |||
| 281 | Ga0068857_100028973 | |||
| 282 | Ga0068854_100007750 | |||
| 283 | Ga0068859_100034460 | |||
| 284 | Ga0068863_100083439 | |||
| 285 | Ga0068858_100011953 | |||
| 286 | Ga0068860_100037885 | |||
| 287 | Ga0081539_10025222 | |||
| 288 | Ga0070716_100038109 | |||
| 289 | Ga0075367_10013310 | |||
| 290 | Ga0075367_10120291 | |||
| 291 | Ga0075366_10007414 | |||
| 292 | Ga0075428_100030296 | |||
| 293 | Ga0075428_100079870 | |||
| 294 | Ga0075431_100007690 | |||
| 295 | Ga0075433_10101209 | |||
| 296 | Ga0075433_10110608 | |||
| 297 | Ga0075433_10142584 | |||
| 298 | Ga0075434_100052342 | |||
| 299 | Ga0075434_100362249 | |||
| 300 | Ga0075429_100006943 | |||
| 301 | Ga0075429_100090559 | |||
| 302 | Ga0075436_100000288 | |||
| 303 | Ga0075436_100066936 | |||
| 304 | Ga0097620_100034460 | |||
| 305 | Ga0099826_10000024 | |||
| 306 | Ga0075435_100252269 | |||
| 307 | Ga0099794_10003043 | |||
| 308 | Ga0111539_10000372 | |||
| 309 | Ga0111539_10062186 | |||
| 310 | Ga0114129_10015295 | |||
| 311 | Ga0114129_10033065 | |||
| 312 | Ga0114129_10055245 | |||
| 313 | Ga0114129_10115832 | |||
| 314 | Ga0114129_10508401 | |||
| 315 | Ga0105249_10084878 | |||
| 316 | Ga0157375_10214639 | |||
| 317 | Ga0157380_10026281 | |||
| 318 | Ga0157380_10073478 | |||
| 319 | Ga0209565_1000727 | |||
| 320 | Ga0209565_1004748 | |||
| 321 | Ga0209673_1016805 | |||
| 322 | Ga0209675_1000684 | |||
| 323 | Ga0209675_1001176 | |||
| 324 | Ga0209676_1000331 | |||
| 325 | Ga0209025_1000485 | |||
| 326 | Ga0209025_1000823 | |||
| 327 | Ga0209025_1000853 | |||
| 328 | Ga0209025_1001173 | |||
| 329 | Ga0209564_1001559 | |||
| 330 | Ga0209564_1004745 | |||
| 331 | Ga0209564_1004809 | |||
| 332 | Ga0209758_1013994 | |||
| 333 | Ga0209256_1000612 | |||
| 334 | Ga0209256_1000802 | |||
| 335 | Ga0207653_10000013 | |||
| 336 | Ga0207699_10000007 | |||
| 337 | Ga0207684_10000037 | |||
| 338 | Ga0207684_10001850 | |||
| 339 | Ga0207684_10059205 | |||
| 340 | Ga0207684_10061779 | |||
| 341 | Ga0207663_10000008 | |||
| 342 | Ga0207646_10000409 | |||
| 343 | Ga0207646_10013314 | |||
| 344 | Ga0207646_10015890 | |||
| 345 | Ga0207681_10018658 | |||
| 346 | Ga0207681_10040094 | |||
| 347 | Ga0207709_10095805 | |||
| 348 | Ga0207665_10045420 | |||
| 349 | Ga0207665_10132146 | |||
| 350 | Ga0207691_10005158 | |||
| 351 | Ga0207689_10037210 | |||
| 352 | Ga0207712_10119352 | |||
| 353 | Ga0207640_10067222 | |||
| 354 | Ga0207703_10078543 | |||
| 355 | Ga0207678_10017081 | |||
| 356 | Ga0207641_10074001 | |||
| 357 | Ga0207648_10000760 | |||
| 358 | Ga0207674_10020996 | |||
| 359 | Ga0207683_10117836 | |||
| 360 | Ga0209282_1000032 | |||
| 361 | Ga0207428_10000117 | |||
| 362 | Ga0207428_10139172 | |||
| 363 | Ga0207428_10215885 | |||
| 364 | Ga0265323_10018369 | |||
| 365 | Ga0265336_10002767 | |||
| 366 | Ga0265338_10000508 | |||
| 367 | Ga0265331_10065063 | |||
| 368 | Ga0316575_10000119 | |||
| 369 | Ga0316593_10033863 | |||
| 370 | Ga0316584_0167552 | |||
| 371 | Ga0395900_0079101 | |||
| 372 | Ga0395905_0000166 | |||
| 373 | Ga0395905_0002893 | |||
| 374 | Ga0400490_60761 | |||
| 375 | Ga0400489_59876 | |||
| 376 | Ga0439431_0016187 | |||
| 377 | Ga0439435_0000145 | |||
| 378 | Ga0451577_0003415 | |||
| 379 | Ga0451577_0009150 | |||
| 380 | Ga0451577_0018971 | |||
| 381 | Ga0451577_0019825 | |||
| 382 | Ga0466972_0000290 | |||
| 383 | Ga0453683_0062877 | |||
| 384 | Ga0466964_0053618 | |||
| 385 | Ga0453684_0002093 | |||
| 386 | Ga0453684_0003780 | |||
| 387 | Ga0453684_0027697 | |||
| 388 | Ga0453684_0076643 | |||
| 389 | Ga0466970_0072366 | |||
| 390 | Ga0466957_0006160 | |||
| 391 | Ga0466959_0025178 | |||
| 392 | Ga0451576_0000013 | |||
| 393 | Ga0451576_0041017 | |||
| 394 | Ga0495605_0001384 | |||
| 395 | Ga0495607_0039916 | |||
| 396 | Ga0495610_0002561 | |||
| 397 | Ga0495616_0008291 | |||
| 398 | Ga0495628_0125630 | |||
| 399 | Ga0495609_0007989 | |||
| 400 | Ga0495622_0001902 | |||
| 401 | Ga0495611_0009522 | |||
| 402 | Ga0495671_0001606 | |||
| 403 | Ga0495649_0013173 | |||
| 404 | Ga0495589_0035530 | |||
| 405 | Ga0495672_0011217 | |||
| 406 | Ga0495672_0074252 | |||
| 407 | Ga0495683_0037005 | |||
| 408 | Ga0496109_0000026 | |||
| 409 | Ga0496116_0035630 | |||
| 410 | Ga0496121_0081145 | |||
| 411 | Ga0496122_0012773 | |||
| 412 | Ga0496123_0005248 | |||
| 413 | Ga0501031_0048775 | |||
| 414 | Ga0501032_0010987 | |||
| 415 | Ga0501033_0000668 | |||
| 416 | Ga0501034_0000134 | |||
| 417 | Ga0501034_0005349 | |||
| 418 | Ga0501034_0121529 | |||
| 419 | Ga0501034_0260096 | |||
| 420 | Ga0501036_0001501 | |||
| 421 | Ga0501037_0004363 | |||
| 422 | Ga0501038_0058343 | |||
| 423 | Ga0501038_0080833 | |||
| 424 | Ga0501043_0006325 | |||
| 425 | Ga0501046_0001989 | |||
| 426 | Ga0501047_0060418 | |||
| 427 | Ga0501075_0195412 | |||
| 428 | Ga0501076_0066802 | |||
| 429 | Ga0501076_0084338 | |||
| 430 | Ga0501079_0037366 | |||
| 431 | Ga0501080_0299291 | |||
| 432 | Ga0501081_0300810 | |||
| 433 | Ga0501044_0038183 | |||
| 434 | Ga0501044_0138006 | |||
| 435 | Ga0501044_0148892 | |||
| 436 | Ga0501045_0040527 | |||
| 437 | nmdc:mga00v17_11738_c1 | |||
| 438 | nmdc:mga00v17_67234_c1 | |||
| 439 | nmdc:mga0k408_1572_c1 | |||
| 440 | nmdc:mga06z11_1314_c1 | |||
| 441 | nmdc:mga05p37_21798_c1 | |||
| 442 | nmdc:mga05p37_28_c1 | |||
| 443 | nmdc:mga05p37_359490_c1 | |||
| 444 | nmdc:mga05p37_416628_c1 | |||
| 445 | nmdc:mga05p37_65266_c1 | |||
| 446 | nmdc:mga09592_5698_c1 | |||
| 447 | nmdc:mga0qj67_194234_c1 | |||
| 448 | nmdc:mga06r32_4034_c1 | |||
| 449 | nmdc:mga08y16_1885_c1 | |||
| 450 | nmdc:mga08y16_48618_c1 | |||
| 451 | nmdc:mga0n895_24637_c1 | |||
| 452 | nmdc:mga0n895_330288_c1 | |||
| 453 | nmdc:mga0n895_70511_c1 | |||
| 454 | nmdc:mga0rr50_121212_c1 | |||
| 455 | nmdc:mga0rr50_285009_c1 | |||
| 456 | nmdc:mga08x19_11_c1 | |||
| 457 | nmdc:mga0a205_215424_c1 | |||
| 458 | nmdc:mga0a205_88545_c1 | |||
| 459 | Ga0500616_0000642 | |||
| 460 | Ga0500637_0021136 | |||
| 461 | Ga0501084_0031579 | |||
| 462 | Ga0501084_0042110 | |||
| 463 | Ga0501082_0042754 | |||
| 464 | 2501075051 | |||
| 465 | 2501412750 | |||
| 466 | 2511099832 | |||
| 467 | 2511102397 | |||
| 468 | 2513956683 | |||
| 469 | 2513962658 | |||
| 470 | 2514044487 | |||
| 471 | 2514050842 | |||
| 472 | 2523103623 | |||
| 473 | 2563061587 | |||
| 474 | 2644027011 | |||
| 475 | 2713478547 | |||
| 476 | 2787437286 | |||
| 477 | 2792837009 | |||
| 478 | 2834642560 | |||
| 479 | 2858694351 | |||
| 480 | 2919049063 | |||
| 481 | 2921647673 | |||
| 482 | 642594557 | |||
| 483 | 644749194 | |||
| 484 | 646814495 | |||
| 485 | 8003402206 | |||
| 486 | 8048747537 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 5u4h-assembly1.cif.gz_B | 1.05 angstrom resolution crystal structure of udp-n-acetylglucosamine 1-carboxyvinyltransferase from acinetobacter baumannii in covalently bound complex with (2r)-2-(phosphonooxy)propanoic acid. | 0.9838 | 1 | 416 |
| 5u4h-assembly1.cif.gz_B | 1.05 angstrom resolution crystal structure of udp-n-acetylglucosamine 1-carboxyvinyltransferase from acinetobacter baumannii in covalently bound complex with (2r)-2-(phosphonooxy)propanoic acid. | 0.9814 | 1 | 416 |
| 6q03-assembly1.cif.gz_A | crystal structure of mura from clostridium difficile in the presence of udp-n-acetyl-alpha-d-muramic acid with modified cys116 (s-[(1s)-1-carboxy-1-(phosphonooxy)ethyl]-l-cysteine) | 0.9805 | 1 | 416 |
| 6cn1-assembly2.cif.gz_G | 2.75 angstrom resolution crystal structure of udp-n-acetylglucosamine 1-carboxyvinyltransferase from pseudomonas putida in complex with uridine-diphosphate-2(n-acetylglucosaminyl) butyric acid, (2r)-2-(phosphonooxy)propanoic acid and magnesium | 0.9798 | 1 | 415 |
| 2rl1-assembly1.cif.gz_A | crystal structure of udp-n-acetylglucosamine enolpyruvyl transferase from haemophilus influenzae in complex with udp-n-acetylglucosamine | 0.9795 | 1 | 416 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_P9WJM1_237_415_3.65.10.10 | Alpha Beta;Alpha-beta prism;UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain;Enolpyruvate transferase domain | 0.9902 | 237 | 413 | 3.65.10.10 |
| af_P0A749_226_417_3.40.50.1370 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Aspartate/ornithine carbamoyltransferase | 0.9898 | 226 | 416 | 3.40.50.1370 |
| 5bq2A01 | Alpha Beta;Alpha-beta prism;UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain;Enolpyruvate transferase domain | 0.9891 | 229 | 415 | 3.65.10.10 |
| af_Q2FWF4_219_417_3.65.10.10 | Alpha Beta;Alpha-beta prism;UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain;Enolpyruvate transferase domain | 0.982 | 216 | 413 | 3.65.10.10 |
| af_P0A749_226_417_3.40.50.1370 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Aspartate/ornithine carbamoyltransferase | 0.9796 | 226 | 416 | 3.40.50.1370 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A2W0ASA3-F1-model_v4 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) (Enoylpyruvate transferase) (UDP-N-acetylglucosamine enolpyruvyl transferase) | 0.9989 | 124 | 239 |
GO:0005737
GO:0008360 GO:0008760 GO:0009252 GO:0051301 GO:0071555 |
| AF-A0A836NXK3-F1-model_v4 | deleted | 0.9955 | 251 | 416 |
|
| AF-A0A2D6QLY6-F1-model_v4 | deleted | 0.9953 | 216 | 416 |
|
| AF-A0A351Q3T8-F1-model_v4 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) (Enoylpyruvate transferase) (UDP-N-acetylglucosamine enolpyruvyl transferase) | 0.9944 | 231 | 416 |
GO:0005737
GO:0008360 GO:0008760 GO:0009252 GO:0051301 GO:0071555 |
| AF-A0A3D3GWW5-F1-model_v4 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) (Enoylpyruvate transferase) (UDP-N-acetylglucosamine enolpyruvyl transferase) | 0.9944 | 153 | 284 |
GO:0005737
GO:0008360 GO:0008760 GO:0009252 GO:0051301 GO:0071555 |