F355405

General Info

Members Datasets Scaffolds Average Seq Length
243 141 486 296

Family's Representative Sequence

Representative Sequence 3300005530|Ga0070679_100032630|Ga0070679_1000326306
Length 332
Sequence MGANIIHPTQRRKAQQTRPARLHSLLESLNYVEGDFRLARMNVLQDSLLELIRRTSTEIPDDVHKAILGSLEQEKKGTIAESAMKIIDQNIALAKNKSQPICQDTGSIIFYVDCPVGYDQISFEEAAREAVKLATKKGYLRQNSVDSVTGKNDGTNLGPGSPTVHFHQHRSPEISVRLVLKGGGCENVGAQYSLPNEKLKANRDLDGCRKVILDAVLQAQGKGCGPGILGVCIGGDRATGYEHSKQQLLRKLDDSNTSPEIDKLEKDIVETANKLGIGPMGFGGKTTLLGTKIGVLNRLPASYFVSVSYMCWAYRRHGVTLDGDGKIGKWLY

Samples

Sample ID Description Type Environment
1 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
11 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
12 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
13 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
14 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
15 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
16 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
17 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
18 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
19 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
20 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
21 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
22 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
23 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
24 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
25 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
26 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
27 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
28 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
29 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
30 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
31 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
32 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
33 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
34 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
35 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
36 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
37 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
38 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
39 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
40 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
41 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
42 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
43 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
44 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
45 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
46 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
47 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
48 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
49 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
50 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
51 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
52 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
53 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
55 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
56 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
57 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
58 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
59 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
60 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
61 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
62 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
63 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
64 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
65 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
66 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
67 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
94 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
95 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
96 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
97 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
98 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
99 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
100 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
101 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
102 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
103 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
104 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
105 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
106 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
107 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
108 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
109 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
110 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
111 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
112 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
113 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
114 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
115 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
116 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
117 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
118 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
119 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
120 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
121 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
122 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
123 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
124 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
125 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
126 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
127 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
128 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
129 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
130 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
132 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
133 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
134 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
135 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
136 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
137 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
138 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
139 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
140 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
141 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.23
Rhizosphere 94.65
Stem 0
Stem Tuber 0
Unclassified 10.29

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070679_100032630 3300005530 Bacteria 5153
2 rootH2_10058561 3300003320 Bacteria 1995
3 rootH1_10335102 3300003323 Bacteria 1772
4 Ga0065707_10092632 3300005295 Bacteria 3742
5 Ga0070683_100000096 3300005329 Bacteria 57429
6 Ga0070670_100000025 3300005331 Bacteria 188514
7 Ga0070670_100017019 3300005331 Bacteria 6240
8 Ga0070670_100396668 3300005331 Bacteria 1218
9 Ga0068869_100017170 3300005334 Bacteria 4899
10 Ga0068869_100112018 3300005334 Bacteria 2077
11 Ga0070666_10047777 3300005335 Bacteria 2874
12 Ga0070680_100015765 3300005336 Bacteria 5934
13 Ga0070682_100000007 3300005337 Bacteria 346590
14 Ga0068868_100000482 3300005338 Bacteria 26485
15 Ga0068868_100004370 3300005338 Bacteria 9906
16 Ga0070689_100001793 3300005340 Bacteria 13793
17 Ga0070689_100007967 3300005340 Bacteria 7434
18 Ga0070687_100085498 3300005343 Bacteria 1731
19 Ga0070687_100113955 3300005343 Bacteria 1535
20 Ga0070692_10020338 3300005345 Bacteria 3218
21 Ga0070692_10164998 3300005345 Bacteria 1272
22 Ga0070675_100000010 3300005354 Bacteria 243396
23 Ga0070674_100069346 3300005356 Bacteria 2487
24 Ga0070673_100008473 3300005364 Bacteria 6836
25 Ga0070688_100188798 3300005365 Bacteria 1434
26 Ga0070688_100200958 3300005365 Bacteria 1394
27 Ga0070714_100003078 3300005435 Bacteria 12373
28 Ga0070713_100021496 3300005436 Bacteria 4966
29 Ga0070713_100060273 3300005436 Bacteria 3172
30 Ga0070701_10013541 3300005438 Unclassified 3714
31 Ga0070700_100000182 3300005441 Bacteria 35745
32 Ga0070708_100114775 3300005445 Bacteria 2478
33 Ga0068867_100078843 3300005459 Bacteria 2478
34 Ga0070684_100001248 3300005535 Bacteria 18219
35 Ga0068853_100086901 3300005539 Unclassified 2743
36 Ga0070672_100001024 3300005543 Bacteria 17002
37 Ga0070686_100001758 3300005544 Bacteria 12130
38 Ga0070693_100009666 3300005547 Bacteria 4801
39 Ga0068855_100339842 3300005563 Bacteria 1656
40 Ga0068855_100485978 3300005563 Bacteria 1343
41 Ga0068857_100011191 3300005577 Bacteria 7803
42 Ga0068854_100002762 3300005578 Bacteria 10905
43 Ga0068856_100102569 3300005614 Bacteria 2854
44 Ga0068859_100117148 3300005617 Bacteria 2729
45 Ga0068864_100000007 3300005618 Bacteria 392187
46 Ga0068866_10067556 3300005718 Bacteria 1877
47 Ga0068861_100024386 3300005719 Bacteria 4374
48 Ga0068851_10185286 3300005834 Unclassified 1155
49 Ga0068858_100001722 3300005842 Bacteria 22354
50 Ga0068858_100252830 3300005842 Bacteria 1674
51 Ga0070717_10000336 3300006028 Bacteria 30289
52 Ga0070716_100004310 3300006173 Bacteria 6780
53 Ga0070716_100247207 3300006173 Bacteria 1213
54 Ga0075428_100001866 3300006844 Bacteria 22580
55 Ga0075428_100193264 3300006844 Bacteria 2201
56 Ga0075430_100275407 3300006846 Unclassified 1392
57 Ga0075431_100000563 3300006847 Bacteria 31265
58 Ga0075431_100013407 3300006847 Bacteria 8282
59 Ga0075431_100041229 3300006847 Bacteria 4759
60 Ga0075434_100083982 3300006871 Bacteria 3183
61 Ga0075429_100428395 3300006880 Unclassified 1159
62 Ga0068865_100034079 3300006881 Bacteria 3414
63 Ga0068865_100083842 3300006881 Bacteria 2295
64 Ga0075436_100001644 3300006914 Bacteria 15270
65 Ga0097620_100117143 3300006931 Bacteria 2729
66 Ga0075435_100000115 3300007076 Bacteria 44397
67 Ga0075435_100018657 3300007076 Bacteria 5284
68 Ga0105244_10032111 3300009036 Bacteria 2783
69 Ga0105240_10103033 3300009093 Bacteria 3468
70 Ga0105240_10124204 3300009093 Bacteria 3104
71 Ga0105240_10203385 3300009093 Bacteria 2319
72 Ga0105240_10535377 3300009093 Unclassified 1298
73 Ga0111539_10000003 3300009094 Bacteria 880006
74 Ga0111539_10021070 3300009094 Bacteria 8027
75 Ga0105245_10000055 3300009098 Bacteria 124667
76 Ga0105245_10000163 3300009098 Bacteria 62999
77 Ga0105245_10002002 3300009098 Bacteria 18493
78 Ga0105245_10039433 3300009098 Bacteria 4204
79 Ga0105238_10000002 3300009551 Bacteria 772711
80 Ga0105239_10024650 3300010375 Bacteria 6627
81 Ga0105239_10032257 3300010375 Bacteria 5757
82 Ga0157369_10000459 3300013105 Bacteria 54061
83 Ga0157369_10800838 3300013105 Unclassified 968
84 Ga0157374_10000016 3300013296 Bacteria 293656
85 Ga0157374_10115955 3300013296 Bacteria 2580
86 Ga0157374_10832689 3300013296 Unclassified 939
87 Ga0157378_10000439 3300013297 Bacteria 40268
88 Ga0157378_10001347 3300013297 Bacteria 22087
89 Ga0157378_10006693 3300013297 Bacteria 10069
90 Ga0157378_10113534 3300013297 Bacteria 2487
91 Ga0163162_10015944 3300013306 Bacteria 7343
92 Ga0157375_10000003 3300013308 Bacteria 476325
93 Ga0157375_10000029 3300013308 Bacteria 199310
94 Ga0157375_10000129 3300013308 Bacteria 75013
95 Ga0157375_10000546 3300013308 Bacteria 33819
96 Ga0157375_10039550 3300013308 Bacteria 4540
97 Ga0157375_10185079 3300013308 Bacteria 2235
98 Ga0157375_10256005 3300013308 Bacteria 1912
99 Ga0163163_10000098 3300014325 Bacteria 91630
100 Ga0163163_10080170 3300014325 Bacteria 3264
101 Ga0163163_10192186 3300014325 Bacteria 2089
102 Ga0157377_10000004 3300014745 Bacteria 430019
103 Ga0157377_10000108 3300014745 Bacteria 56604
104 Ga0157376_10000018 3300014969 Bacteria 259397
105 Ga0157376_10022944 3300014969 Unclassified 4874
106 Ga0213873_10000001 3300021358 Bacteria 1657979
107 Ga0213873_10001249 3300021358 Archaea 4185
108 Ga0213876_10000002 3300021384 Bacteria 1168769
109 Ga0213876_10000203 3300021384 Bacteria 60770
110 Ga0213876_10004910 3300021384 Bacteria 7412
111 Ga0207655_1037768 3300025728 Bacteria 2121
112 Ga0207705_10065955 3300025909 Bacteria 2618
113 Ga0207695_10048582 3300025913 Bacteria 4480
114 Ga0207695_10089095 3300025913 Bacteria 3103
115 Ga0207695_10146915 3300025913 Bacteria 2301
116 Ga0207695_10219778 3300025913 Bacteria 1808
117 Ga0207695_10307957 3300025913 Bacteria 1474
118 Ga0207660_10018971 3300025917 Bacteria 4594
119 Ga0207694_10000001 3300025924 Bacteria 4078485
120 Ga0207650_10000079 3300025925 Bacteria 130505
121 Ga0207650_10010337 3300025925 Bacteria 6399
122 Ga0207650_10061962 3300025925 Bacteria 2794
123 Ga0207659_10000001 3300025926 Bacteria 660958
124 Ga0207687_10000035 3300025927 Bacteria 124800
125 Ga0207687_10000830 3300025927 Bacteria 20887
126 Ga0207687_10001164 3300025927 Bacteria 17956
127 Ga0207700_10026752 3300025928 Bacteria 4028
128 Ga0207700_10047877 3300025928 Bacteria 3172
129 Ga0207664_10020839 3300025929 Bacteria 4864
130 Ga0207686_10062955 3300025934 Bacteria 2357
131 Ga0207670_10001971 3300025936 Bacteria 10761
132 Ga0207670_10009454 3300025936 Bacteria 5564
133 Ga0207669_10042660 3300025937 Bacteria 2650
134 Ga0207665_10012674 3300025939 Bacteria 5543
135 Ga0207665_10104161 3300025939 Bacteria 1985
136 Ga0207691_10002795 3300025940 Bacteria 17023
137 Ga0207689_10001961 3300025942 Bacteria 19432
138 Ga0207661_10000037 3300025944 Bacteria 148458
139 Ga0207661_10230401 3300025944 Bacteria 1640
140 Ga0207661_10584015 3300025944 Bacteria 1025
141 Ga0207667_10399718 3300025949 Bacteria 1399
142 Ga0207677_10000001 3300026023 Bacteria 534789
143 Ga0207677_10002484 3300026023 Bacteria 9671
144 Ga0207703_10000069 3300026035 Bacteria 124592
145 Ga0207703_10378945 3300026035 Bacteria 1308
146 Ga0207639_10000013 3300026041 Bacteria 293084
147 Ga0207639_10143881 3300026041 Bacteria 1990
148 Ga0207708_10000027 3300026075 Bacteria 166457
149 Ga0207648_10126086 3300026089 Bacteria 2252
150 Ga0207648_10209557 3300026089 Unclassified 1730
151 Ga0207676_10000015 3300026095 Bacteria 329100
152 Ga0207676_10099985 3300026095 Bacteria 2402
153 Ga0207674_10023683 3300026116 Bacteria 6572
154 Ga0207674_10199860 3300026116 Bacteria 1948
155 Ga0207675_100004116 3300026118 Bacteria 14076
156 Ga0207428_10000001 3300027907 Bacteria 1034622
157 Ga0265318_10097681 3300028577 Bacteria 1081
158 Ga0265338_10025770 3300028800 Bacteria 5955
159 Ga0265338_10038646 3300028800 Bacteria 4516
160 Ga0265338_10141546 3300028800 Bacteria 1883
161 Ga0307511_10001456 3300030521 Bacteria 25010
162 Ga0265320_10011816 3300031240 Bacteria 5117
163 Ga0316575_10055994 3300031665 Bacteria 1571
164 Ga0373932_0000063 3300035112 Bacteria 26320
165 Ga0373935_0267021 3300035692 Bacteria 1201
166 Ga0373927_0116638 3300035695 Bacteria 1741
167 Ga0373927_0139778 3300035695 Unclassified 1584
168 Ga0373947_0101301 3300035725 Bacteria 1810
169 Ga0373937_0018553 3300036401 Bacteria 6215
170 Ga0373937_0694743 3300036401 Unclassified 964
171 Ga0316584_0131069 3300036712 Bacteria 1873
172 Ga0373925_0005151 3300037068 Bacteria 9798
173 Ga0395905_0014286 3300037471 Bacteria 7586
174 Ga0395905_0031533 3300037471 Bacteria 4990
175 Ga0436364_0524146 3300037853 Bacteria 2067
176 Ga0436365_0507938 3300039437 Bacteria 8156
177 Ga0436365_0820057 3300039437 Bacteria 16698
178 Ga0436365_1583131 3300039437 Bacteria 68276
179 Ga0436362_0087447 3300039453 Bacteria 8087
180 Ga0436362_0272072 3300039453 Bacteria 138134
181 Ga0451577_0001886 3300042876 Bacteria 26682
182 Ga0451577_0003194 3300042876 Bacteria 18412
183 Ga0451577_0012091 3300042876 Bacteria 8119
184 Ga0451577_0105193 3300042876 Bacteria 2522
185 Ga0451577_0175711 3300042876 Bacteria 1930
186 Ga0451577_0194647 3300042876 Unclassified 1829
187 Ga0451577_0446885 3300042876 Unclassified 1174
188 Ga0453683_0058112 3300044673 Unclassified 2420
189 Ga0466964_0042179 3300044706 Bacteria 1848
190 Ga0453684_0002080 3300044712 Bacteria 50813
191 Ga0453684_0014556 3300044712 Bacteria 12560
192 Ga0453684_0016193 3300044712 Bacteria 11685
193 Ga0453684_0016553 3300044712 Bacteria 11515
194 Ga0453684_0035874 3300044712 Bacteria 6844
195 Ga0453684_0115760 3300044712 Bacteria 3248
196 Ga0453684_0214489 3300044712 Bacteria 2235
197 Ga0453684_0554961 3300044712 Bacteria 1265
198 Ga0451576_0000246 3300045051 Bacteria 132778
199 Ga0451576_0063602 3300045051 Bacteria 3846
200 Ga0451576_0119165 3300045051 Bacteria 2748
201 Ga0451576_0201490 3300045051 Bacteria 2079
202 Ga0451576_0294694 3300045051 Bacteria 1696
203 Ga0451576_0429154 3300045051 Unclassified 1387
204 Ga0451576_0435384 3300045051 Unclassified 1376
205 Ga0451576_0760830 3300045051 Unclassified 1017
206 Ga0495641_0068026 3300046461 Unclassified 1601
207 Ga0495666_0000894 3300046526 Bacteria 13969
208 Ga0495666_0088691 3300046526 Bacteria 1461
209 Ga0495666_0100487 3300046526 Unclassified 1363
210 Ga0495586_0000012 3300046535 Bacteria 138093
211 Ga0495586_0016371 3300046535 Bacteria 3944
212 Ga0495645_0162058 3300046543 Unclassified 1546
213 Ga0495634_0009642 3300046642 Bacteria 7112
214 Ga0495634_0036154 3300046642 Bacteria 3379
215 Ga0495657_0047201 3300046675 Bacteria 2912
216 Ga0495647_0060783 3300046681 Unclassified 1490
217 Ga0495658_0132048 3300046683 Unclassified 1521
218 Ga0495613_0024617 3300046689 Bacteria 4486
219 Ga0495674_0003001 3300047319 Bacteria 16443
220 Ga0495676_0009916 3300047321 Bacteria 8651
221 Ga0495679_015937 3300047446 Bacteria 2731
222 Ga0496112_0006309 3300048915 Bacteria 10409
223 Ga0496113_0097111 3300048916 Bacteria 2279
224 Ga0496115_0044407 3300048918 Bacteria 3544
225 Ga0501034_0041789 3300049571 Bacteria 4639
226 Ga0501073_0070700 3300049589 Bacteria 2431
227 Ga0501080_0006870 3300049742 Bacteria 10261
228 Ga0501083_0111830 3300049744 Bacteria 1795
229 nmdc:mga09592_355082_c1 3300050508 Unclassified 1268
230 nmdc:mga09592_566272_c1 3300050508 Unclassified 975
231 nmdc:mga0qj67_166522_c1 3300050509 Bacteria 1789
232 nmdc:mga0qj67_391577_c1 3300050509 Bacteria 1122
233 nmdc:mga06r32_113061_c1 3300050510 Bacteria 2672
234 nmdc:mga06r32_23953_c1 3300050510 Bacteria 5657
235 nmdc:mga06r32_583_c1 3300050510 Bacteria 31805
236 nmdc:mga08y16_1_c1 3300050511 Bacteria 1034622
237 nmdc:mga08y16_290254_c1 3300050511 Bacteria 1686
238 nmdc:mga08y16_31746_c1 3300050511 Bacteria 5553
239 nmdc:mga0n895_108605_c1 3300050512 Bacteria 2789
240 nmdc:mga0rr50_15605_c1 3300050513 Bacteria 5018
241 nmdc:mga0rr50_49_c1 3300050513 Bacteria 71590
242 nmdc:mga08x19_1341_c1 3300050514 Bacteria 15270
243 Ga0495655_0000097 3300053083 Bacteria 16445
244 Ga0070679_100032630
245 rootH2_10058561
246 rootH1_10335102
247 Ga0065707_10092632
248 Ga0070683_100000096
249 Ga0070670_100000025
250 Ga0070670_100017019
251 Ga0070670_100396668
252 Ga0068869_100017170
253 Ga0068869_100112018
254 Ga0070666_10047777
255 Ga0070680_100015765
256 Ga0070682_100000007
257 Ga0068868_100000482
258 Ga0068868_100004370
259 Ga0070689_100001793
260 Ga0070689_100007967
261 Ga0070687_100085498
262 Ga0070687_100113955
263 Ga0070692_10020338
264 Ga0070692_10164998
265 Ga0070675_100000010
266 Ga0070674_100069346
267 Ga0070673_100008473
268 Ga0070688_100188798
269 Ga0070688_100200958
270 Ga0070714_100003078
271 Ga0070713_100021496
272 Ga0070713_100060273
273 Ga0070701_10013541
274 Ga0070700_100000182
275 Ga0070708_100114775
276 Ga0068867_100078843
277 Ga0070684_100001248
278 Ga0068853_100086901
279 Ga0070672_100001024
280 Ga0070686_100001758
281 Ga0070693_100009666
282 Ga0068855_100339842
283 Ga0068855_100485978
284 Ga0068857_100011191
285 Ga0068854_100002762
286 Ga0068856_100102569
287 Ga0068859_100117148
288 Ga0068864_100000007
289 Ga0068866_10067556
290 Ga0068861_100024386
291 Ga0068851_10185286
292 Ga0068858_100001722
293 Ga0068858_100252830
294 Ga0070717_10000336
295 Ga0070716_100004310
296 Ga0070716_100247207
297 Ga0075428_100001866
298 Ga0075428_100193264
299 Ga0075430_100275407
300 Ga0075431_100000563
301 Ga0075431_100013407
302 Ga0075431_100041229
303 Ga0075434_100083982
304 Ga0075429_100428395
305 Ga0068865_100034079
306 Ga0068865_100083842
307 Ga0075436_100001644
308 Ga0097620_100117143
309 Ga0075435_100000115
310 Ga0075435_100018657
311 Ga0105244_10032111
312 Ga0105240_10103033
313 Ga0105240_10124204
314 Ga0105240_10203385
315 Ga0105240_10535377
316 Ga0111539_10000003
317 Ga0111539_10021070
318 Ga0105245_10000055
319 Ga0105245_10000163
320 Ga0105245_10002002
321 Ga0105245_10039433
322 Ga0105238_10000002
323 Ga0105239_10024650
324 Ga0105239_10032257
325 Ga0157369_10000459
326 Ga0157369_10800838
327 Ga0157374_10000016
328 Ga0157374_10115955
329 Ga0157374_10832689
330 Ga0157378_10000439
331 Ga0157378_10001347
332 Ga0157378_10006693
333 Ga0157378_10113534
334 Ga0163162_10015944
335 Ga0157375_10000003
336 Ga0157375_10000029
337 Ga0157375_10000129
338 Ga0157375_10000546
339 Ga0157375_10039550
340 Ga0157375_10185079
341 Ga0157375_10256005
342 Ga0163163_10000098
343 Ga0163163_10080170
344 Ga0163163_10192186
345 Ga0157377_10000004
346 Ga0157377_10000108
347 Ga0157376_10000018
348 Ga0157376_10022944
349 Ga0213873_10000001
350 Ga0213873_10001249
351 Ga0213876_10000002
352 Ga0213876_10000203
353 Ga0213876_10004910
354 Ga0207655_1037768
355 Ga0207705_10065955
356 Ga0207695_10048582
357 Ga0207695_10089095
358 Ga0207695_10146915
359 Ga0207695_10219778
360 Ga0207695_10307957
361 Ga0207660_10018971
362 Ga0207694_10000001
363 Ga0207650_10000079
364 Ga0207650_10010337
365 Ga0207650_10061962
366 Ga0207659_10000001
367 Ga0207687_10000035
368 Ga0207687_10000830
369 Ga0207687_10001164
370 Ga0207700_10026752
371 Ga0207700_10047877
372 Ga0207664_10020839
373 Ga0207686_10062955
374 Ga0207670_10001971
375 Ga0207670_10009454
376 Ga0207669_10042660
377 Ga0207665_10012674
378 Ga0207665_10104161
379 Ga0207691_10002795
380 Ga0207689_10001961
381 Ga0207661_10000037
382 Ga0207661_10230401
383 Ga0207661_10584015
384 Ga0207667_10399718
385 Ga0207677_10000001
386 Ga0207677_10002484
387 Ga0207703_10000069
388 Ga0207703_10378945
389 Ga0207639_10000013
390 Ga0207639_10143881
391 Ga0207708_10000027
392 Ga0207648_10126086
393 Ga0207648_10209557
394 Ga0207676_10000015
395 Ga0207676_10099985
396 Ga0207674_10023683
397 Ga0207674_10199860
398 Ga0207675_100004116
399 Ga0207428_10000001
400 Ga0265318_10097681
401 Ga0265338_10025770
402 Ga0265338_10038646
403 Ga0265338_10141546
404 Ga0307511_10001456
405 Ga0265320_10011816
406 Ga0316575_10055994
407 Ga0373932_0000063
408 Ga0373935_0267021
409 Ga0373927_0116638
410 Ga0373927_0139778
411 Ga0373947_0101301
412 Ga0373937_0018553
413 Ga0373937_0694743
414 Ga0316584_0131069
415 Ga0373925_0005151
416 Ga0395905_0014286
417 Ga0395905_0031533
418 Ga0436364_0524146
419 Ga0436365_0507938
420 Ga0436365_0820057
421 Ga0436365_1583131
422 Ga0436362_0087447
423 Ga0436362_0272072
424 Ga0451577_0001886
425 Ga0451577_0003194
426 Ga0451577_0012091
427 Ga0451577_0105193
428 Ga0451577_0175711
429 Ga0451577_0194647
430 Ga0451577_0446885
431 Ga0453683_0058112
432 Ga0466964_0042179
433 Ga0453684_0002080
434 Ga0453684_0014556
435 Ga0453684_0016193
436 Ga0453684_0016553
437 Ga0453684_0035874
438 Ga0453684_0115760
439 Ga0453684_0214489
440 Ga0453684_0554961
441 Ga0451576_0000246
442 Ga0451576_0063602
443 Ga0451576_0119165
444 Ga0451576_0201490
445 Ga0451576_0294694
446 Ga0451576_0429154
447 Ga0451576_0435384
448 Ga0451576_0760830
449 Ga0495641_0068026
450 Ga0495666_0000894
451 Ga0495666_0088691
452 Ga0495666_0100487
453 Ga0495586_0000012
454 Ga0495586_0016371
455 Ga0495645_0162058
456 Ga0495634_0009642
457 Ga0495634_0036154
458 Ga0495657_0047201
459 Ga0495647_0060783
460 Ga0495658_0132048
461 Ga0495613_0024617
462 Ga0495674_0003001
463 Ga0495676_0009916
464 Ga0495679_015937
465 Ga0496112_0006309
466 Ga0496113_0097111
467 Ga0496115_0044407
468 Ga0501034_0041789
469 Ga0501073_0070700
470 Ga0501080_0006870
471 Ga0501083_0111830
472 nmdc:mga09592_355082_c1
473 nmdc:mga09592_566272_c1
474 nmdc:mga0qj67_166522_c1
475 nmdc:mga0qj67_391577_c1
476 nmdc:mga06r32_113061_c1
477 nmdc:mga06r32_23953_c1
478 nmdc:mga06r32_583_c1
479 nmdc:mga08y16_1_c1
480 nmdc:mga08y16_290254_c1
481 nmdc:mga08y16_31746_c1
482 nmdc:mga0n895_108605_c1
483 nmdc:mga0rr50_15605_c1
484 nmdc:mga0rr50_49_c1
485 nmdc:mga08x19_1341_c1
486 Ga0495655_0000097

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05681

Fumerase

Fumarate hydratase (Fumerase)

45

320

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
7xky-assembly1.cif.gz_A crystal structure of methanocaldococcus jannaschii two-subunit fumarate hydratase apo-protein complex 0.9247 4 281
7xky-assembly1.cif.gz_A crystal structure of methanocaldococcus jannaschii two-subunit fumarate hydratase apo-protein complex 0.9059 4 281
6unz-assembly1.cif.gz_A crystal structure of cytosolic fumarate hydratase from leishmania major 0.8382 4 285
6upo-assembly1.cif.gz_B crystal structure of h334a variant of cytosolic fumarate hydratase from leishmania major in a complex with s-malate 0.8273 3 285
6uqn-assembly1.cif.gz_B crystal structure of r173a variant of cytosolic fumarate hydratase from leishmania major in a complex with fumarate and s-malate 0.8198 4 292
ID Description Score Start End Superfamily
1w5fB02 Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;Tubulin/FtsZ, C-terminal domain 0.6419 63 130 3.30.1330.20
af_Q09773_1337_1451_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.5853 62 96 3.30.300.30
af_Q4E674_25_205_1.20.1260.10 Mainly Alpha;Up-down Bundle;Ferritin;Ferritin, core subunit, four-helix bundle 0.5757 4 58 1.20.1260.10
1ofuB02 Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;Tubulin/FtsZ, C-terminal domain 0.5714 63 140 3.30.1330.20
af_Q58039_249_363_3.30.1330.20 Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;Tubulin/FtsZ, C-terminal domain 0.5556 63 142 3.30.1330.20
ID Description Score Start End GO Terms
AF-T0DPB1-F1-model_v4 Fumarate hydratase 0.9802 4 293 GO:0016829
GO:0046872
GO:0051539
AF-A0A1F3X989-F1-model_v4 Fe-S hydro-lyase tartrate dehydratase alpha-type catalytic domain-containing protein 0.9794 4 293 GO:0016829
GO:0046872
GO:0051539
AF-A0A7V4J138-F1-model_v4 Fumarate hydratase 0.979 4 293 GO:0016829
GO:0046872
GO:0051539
AF-T0RJG6-F1-model_v4 Fumarate hydratase I 0.9784 1 293 GO:0016829
GO:0046872
GO:0051539
AF-A0A3N5KFQ7-F1-model_v4 Fumarate hydratase 0.9772 4 293 GO:0016829
GO:0046872
GO:0051539

Map