F355436

General Info

Members Datasets Scaffolds Average Seq Length
243 194 486 455

Family's Representative Sequence

Representative Sequence 3300005841|Ga0068863_100049857|Ga0068863_1000498571
Length 474
Sequence MDRPGAGTQDPVGRVKTPMARNTQVAADHSAPPITEILARFTATHPSRGWSDAVEREAHRTFLNWAGCAVGAATHEAMHSALAGVQMLEPAAQATLLGRRERVDMASAALLNGISSHTFDFDDTHLKTIIHPAGPVASAALALAEHTGASGRALLDALVIGIDVSCRMGNVMYPDHYDRGWHITGSTGMLGAAAACARLLGLDEKRTAMALGIAASQPVGLREQFGTMTKPFHPGAAARAGLLSALMAKHGYTASVRALEAPRGFVQVVSDKRAWNEVTDELGERFEISFNTYKPFACGIVIHPSIDACVQLRERGVQPEDVERIELKVHSLVLELTGKKEPVDGLQGKFSVYHGCAVGLIFARAGEPEYDDAIVNREDVVALRRKVVASVDDAIDEAAADVTAVLRDGRRVHVFVEHAIGSLQRPMGDAALDAKFETQSTPILGAQRTRELIAACRRLGDLGDVRTLCALARP

Samples

Sample ID Description Type Environment
1 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
2 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
3 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
4 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
5 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
6 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
7 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
8 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
9 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
10 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
11 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
12 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
16 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
17 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
18 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
19 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
20 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
21 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
22 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
23 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
24 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
25 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
26 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
27 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
28 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
29 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
30 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
31 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
32 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
33 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
34 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
35 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
36 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
37 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
38 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
39 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
41 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
42 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
43 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
44 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
45 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
46 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
47 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
48 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
49 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
50 3300015683 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_F04 Metagenome Rhizosphere
51 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
53 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
54 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
55 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
56 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
57 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
58 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
80 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
84 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
85 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
86 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
87 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
88 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
89 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
90 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
91 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
92 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
93 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
94 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
95 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
96 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
97 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
98 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
99 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
100 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
101 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
102 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
103 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
104 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
105 3300041492 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_2 MetaG Metagenome Unclassified
106 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
107 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
108 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
109 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
110 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
111 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
112 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
113 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
114 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
115 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
116 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
117 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
118 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
119 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
120 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
121 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
122 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
123 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
124 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
125 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
126 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
127 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
128 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
129 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
130 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
131 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
132 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
133 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
134 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
135 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
136 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
137 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
138 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
139 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
140 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
143 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
147 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
148 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
149 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
150 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
151 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
152 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
153 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
154 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
155 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
156 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
157 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
158 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
159 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
160 3300053110 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 endosphere Metagenome Endosphere
161 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
162 3300053120 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere Metagenome Endosphere
163 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
164 3300053126 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 endosphere Metagenome Endosphere
165 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
166 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
167 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
168 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
169 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
170 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
171 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
172 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
173 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
174 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
175 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
176 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
177 3300053162 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 endosphere Metagenome Endosphere
178 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
179 3300053739 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 endosphere Metagenome Endosphere
180 2585428057 Methylibium sp. YR605 Isolate Rhizosphere
181 2585428058 Methylibium sp. CF468 Isolate Rhizosphere
182 2588253510 Rhizobacter sp. OV335 Isolate Rhizosphere
183 2643221609 Acidovorax sp. Root217 Isolate Unclassified
184 2738543012 Acidovorax sp. CF301 Isolate Unclassified
185 2738543013 Variovorax sp. BT01 Isolate Unclassified
186 2831864461 Roseateles noduli HZ7 Isolate Nodule
187 2842733646 Variovorax sp. R-72446 Isolate Unclassified
188 2855730933 Achromobacter sp. HZ28 Isolate Nodule
189 2855767633 Achromobacter sp. HZ34 Isolate Nodule
190 2881412998 Achromobacter aloeverae AVA-1 Isolate Unclassified
191 2904541872 Variovorax sp. 1615 Isolate Rhizosphere
192 2928084124 Variovorax paradoxus 1218 Isolate Unclassified
193 2929160207 Variovorax sp. R-72349 Hybrid assembly Isolate Unclassified
194 2939631187 Ottowia thiooxydans 2709 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.83
Metatranscriptomes 0
Isolates 6.17

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 25.51
Nodule 1.23
Rhizoplane 4.12
Rhizosphere 55.97
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068863_100049857 3300005841 Bacteria 3970
2 JGI25153J46596_10001547 3300003215 Bacteria 13664
3 Ga0055525_1000013 3300003759 Bacteria 440870
4 Ga0055526_1000623 3300003771 Bacteria 27530
5 Ga0055530_10006422 3300003791 Bacteria 5259
6 Ga0055531_10000312 3300003794 Bacteria 47848
7 Ga0055543_1003908 3300004625 Bacteria 4214
8 Ga0065165_1000070 3300005262 Bacteria 168230
9 Ga0065707_10102849 3300005295 Bacteria 2779
10 Ga0070658_10003541 3300005327 Bacteria 12818
11 Ga0070658_10206913 3300005327 Bacteria 1657
12 Ga0070670_100017564 3300005331 Bacteria 6138
13 Ga0068868_100215080 3300005338 Bacteria 1608
14 Ga0070669_100004036 3300005353 Bacteria 10621
15 Ga0070675_100007049 3300005354 Bacteria 8644
16 Ga0070671_100120557 3300005355 Bacteria 2207
17 Ga0070673_100135262 3300005364 Bacteria 2074
18 Ga0070667_100003367 3300005367 Bacteria 13647
19 Ga0070667_100207849 3300005367 Bacteria 1739
20 Ga0068867_100006849 3300005459 Bacteria 8058
21 Ga0068853_100012992 3300005539 Bacteria 6788
22 Ga0070672_100001669 3300005543 Bacteria 13824
23 Ga0070665_100091204 3300005548 Bacteria 3053
24 Ga0070665_100128680 3300005548 Bacteria 2534
25 Ga0068852_100009075 3300005616 Bacteria 7364
26 Ga0068859_100162007 3300005617 Bacteria 2316
27 Ga0068861_100014672 3300005719 Bacteria 5502
28 Ga0068860_100006915 3300005843 Bacteria 11369
29 Ga0068862_100018570 3300005844 Bacteria 5791
30 Ga0081539_10015143 3300005985 Bacteria 5635
31 Ga0075362_10008110 3300006177 Bacteria 4006
32 Ga0075367_10037690 3300006178 Bacteria 2811
33 Ga0075369_10052456 3300006186 Bacteria 1768
34 Ga0075366_10001959 3300006195 Bacteria 10418
35 Ga0075366_10006197 3300006195 Bacteria 6528
36 Ga0075366_10015597 3300006195 Bacteria 4359
37 Ga0097621_100021399 3300006237 Bacteria 5002
38 Ga0075370_10031020 3300006353 Bacteria 2983
39 Ga0068871_100033503 3300006358 Bacteria 4068
40 Ga0075428_100002960 3300006844 Bacteria 18524
41 Ga0075430_100080268 3300006846 Bacteria 2733
42 Ga0075429_100007863 3300006880 Bacteria 9261
43 Ga0068865_100021570 3300006881 Bacteria 4191
44 Ga0097620_100162005 3300006931 Bacteria 2316
45 Ga0111539_10004114 3300009094 Bacteria 19083
46 Ga0105242_10001602 3300009176 Bacteria 17819
47 Ga0105248_10001312 3300009177 Bacteria 27697
48 Ga0105248_10032838 3300009177 Bacteria 5799
49 Ga0105249_10001991 3300009553 Bacteria 17741
50 Ga0163162_10010523 3300013306 Bacteria 8996
51 Ga0157372_10012110 3300013307 Bacteria 9187
52 Ga0157375_10065429 3300013308 Bacteria 3624
53 Ga0157375_10098773 3300013308 Bacteria 2997
54 Ga0157380_10146175 3300014326 Bacteria 2038
55 Ga0157379_10010911 3300014968 Bacteria 7921
56 Ga0157379_10025743 3300014968 Bacteria 5230
57 Ga0157379_10180890 3300014968 Bacteria 1905
58 Ga0157376_10145810 3300014969 Bacteria 2129
59 Ga0183362_10002 3300015683 Bacteria 1432711
60 Ga0209563_100025 3300025230 Bacteria 596456
61 Ga0209025_1000019 3300025294 Bacteria 631548
62 Ga0209025_1000029 3300025294 Bacteria 488571
63 Ga0209564_1000218 3300025295 Bacteria 130563
64 Ga0209758_1000268 3300025297 Bacteria 103231
65 Ga0209050_1002737 3300025298 Bacteria 14217
66 Ga0209050_1003658 3300025298 Bacteria 11108
67 Ga0209051_1001437 3300025303 Bacteria 20303
68 Ga0209257_1000015 3300025304 Bacteria 908141
69 Ga0207652_10189903 3300025921 Bacteria 1848
70 Ga0207681_10006022 3300025923 Bacteria 7439
71 Ga0207694_10026221 3300025924 Bacteria 4432
72 Ga0207659_10020280 3300025926 Bacteria 4392
73 Ga0207664_10136896 3300025929 Bacteria 2067
74 Ga0207644_10011943 3300025931 Bacteria 5759
75 Ga0207704_10009638 3300025938 Bacteria 4670
76 Ga0207704_10020826 3300025938 Bacteria 3478
77 Ga0207691_10025240 3300025940 Bacteria 5580
78 Ga0207691_10047385 3300025940 Bacteria 3944
79 Ga0207691_10047703 3300025940 Bacteria 3930
80 Ga0207691_10075596 3300025940 Bacteria 3037
81 Ga0207711_10004798 3300025941 Bacteria 11476
82 Ga0207711_10057777 3300025941 Bacteria 3335
83 Ga0207667_10089537 3300025949 Bacteria 3180
84 Ga0207651_10179176 3300025960 Bacteria 1679
85 Ga0207712_10040383 3300025961 Bacteria 3202
86 Ga0207658_10001976 3300025986 Bacteria 15297
87 Ga0207677_10185284 3300026023 Bacteria 1641
88 Ga0207678_10135852 3300026067 Bacteria 2098
89 Ga0207708_10054960 3300026075 Bacteria 3036
90 Ga0207648_10003527 3300026089 Bacteria 16379
91 Ga0207648_10055260 3300026089 Bacteria 3466
92 Ga0207676_10061982 3300026095 Bacteria 2964
93 Ga0207675_100000401 3300026118 Bacteria 41583
94 Ga0207683_10042626 3300026121 Bacteria 3964
95 Ga0207683_10061942 3300026121 Bacteria 3294
96 Ga0207698_10009676 3300026142 Bacteria 6156
97 Ga0207428_10011349 3300027907 Bacteria 7878
98 Ga0268266_10061007 3300028379 Bacteria 3251
99 Ga0268265_10107989 3300028380 Bacteria 2264
100 Ga0268264_10048065 3300028381 Bacteria 3548
101 Ga0268264_10049280 3300028381 Bacteria 3504
102 Ga0307517_10109097 3300028786 Bacteria 2119
103 Ga0307515_10000051 3300028794 Bacteria 272100
104 Ga0307515_10000093 3300028794 Bacteria 212053
105 Ga0307515_10000204 3300028794 Bacteria 145075
106 Ga0307515_10000651 3300028794 Bacteria 80257
107 Ga0307515_10064322 3300028794 Bacteria 5130
108 Ga0307512_10039531 3300030522 Bacteria 3951
109 Ga0265329_10012586 3300031242 Bacteria 3037
110 Ga0265327_10001335 3300031251 Bacteria 31984
111 Ga0307513_10000104 3300031456 Bacteria 119239
112 Ga0307513_10000113 3300031456 Bacteria 114576
113 Ga0307513_10010357 3300031456 Bacteria 11695
114 Ga0307509_10001413 3300031507 Bacteria 40503
115 Ga0307509_10089327 3300031507 Bacteria 3160
116 Ga0307408_100001530 3300031548 Bacteria 17167
117 Ga0307408_100026681 3300031548 Bacteria 3971
118 Ga0265314_10003637 3300031711 Bacteria 14832
119 Ga0265342_10014425 3300031712 Bacteria 5245
120 Ga0307516_10016192 3300031730 Bacteria 7810
121 Ga0307405_10027912 3300031731 Bacteria 3280
122 Ga0307406_10000141 3300031901 Bacteria 43017
123 Ga0307412_10044843 3300031911 Bacteria 2887
124 Ga0307510_10041027 3300033180 Bacteria 5068
125 Ga0307510_10118686 3300033180 Bacteria 2357
126 Ga0373925_0008608 3300037068 Bacteria 7436
127 Ga0395899_0010596 3300037312 Bacteria 7065
128 Ga0395899_0033266 3300037312 Bacteria 3872
129 Ga0395900_0034767 3300037418 Bacteria 5191
130 Ga0395900_0109892 3300037418 Bacteria 2832
131 Ga0395898_0003041 3300037466 Bacteria 19009
132 Ga0395905_0000389 3300037471 Bacteria 62338
133 Ga0395905_0009941 3300037471 Bacteria 9269
134 Ga0395905_0016504 3300037471 Bacteria 7019
135 Ga0395905_0045547 3300037471 Bacteria 4114
136 Ga0395905_0255278 3300037471 Bacteria 1637
137 Ga0395905_0289723 3300037471 Bacteria 1524
138 Ga0395901_0083780 3300038443 Bacteria 3333
139 Ga0395901_0148025 3300038443 Bacteria 2467
140 Ga0395901_0296477 3300038443 Bacteria 1677
141 Ga0451793_0707324 3300041452 Bacteria 2610
142 Ga0451835_0271180 3300041492 Bacteria 1273
143 Ga0451577_0001779 3300042876 Bacteria 27698
144 Ga0495627_030589 3300046453 Bacteria 1705
145 Ga0495592_0000262 3300046454 Bacteria 44956
146 Ga0495631_0000082 3300046518 Bacteria 61773
147 Ga0495632_0002553 3300046519 Bacteria 13792
148 Ga0495637_0002629 3300046520 Bacteria 9845
149 Ga0495663_0028504 3300046525 Bacteria 1644
150 Ga0495642_0058400 3300046528 Bacteria 1597
151 Ga0495586_0055917 3300046535 Bacteria 2139
152 Ga0495621_0024827 3300046539 Bacteria 2006
153 Ga0495656_0000047 3300046615 Bacteria 59690
154 Ga0495625_0036214 3300046660 Bacteria 3629
155 Ga0495646_0007763 3300046680 Bacteria 6816
156 Ga0495649_0006431 3300046694 Bacteria 7313
157 Ga0495676_0005431 3300047321 Bacteria 11692
158 Ga0495684_0040082 3300047471 Bacteria 3591
159 Ga0495686_0011103 3300047472 Bacteria 6362
160 Ga0495593_0004074 3300047673 Bacteria 8697
161 Ga0496101_0040358 3300048904 Bacteria 3324
162 Ga0496102_0006139 3300048905 Bacteria 10239
163 Ga0496104_0019273 3300048907 Bacteria 6239
164 Ga0496105_0006380 3300048908 Bacteria 9062
165 Ga0496106_0076815 3300048909 Bacteria 2560
166 Ga0496108_0068716 3300048911 Bacteria 2989
167 Ga0496110_0019162 3300048913 Bacteria 5753
168 Ga0496112_0062520 3300048915 Bacteria 3672
169 Ga0496113_0031926 3300048916 Bacteria 3825
170 Ga0496116_0007313 3300048919 Bacteria 9832
171 Ga0496116_0037004 3300048919 Bacteria 3409
172 Ga0496117_0044046 3300048920 Bacteria 3236
173 Ga0496121_0007783 3300048924 Bacteria 12834
174 Ga0496121_0012676 3300048924 Bacteria 9149
175 Ga0496122_0000272 3300048925 Bacteria 115666
176 Ga0496123_0000221 3300048926 Bacteria 115688
177 Ga0496123_0071611 3300048926 Bacteria 2161
178 Ga0496124_0033936 3300048927 Bacteria 4485
179 Ga0501033_0028411 3300049570 Bacteria 4201
180 Ga0501034_0041307 3300049571 Bacteria 4666
181 Ga0501037_0118938 3300049573 Bacteria 1900
182 Ga0501039_0067537 3300049575 Bacteria 2777
183 Ga0501043_0103843 3300049579 Bacteria 2233
184 Ga0501047_0006267 3300049581 Bacteria 11180
185 Ga0501035_0018114 3300049822 Bacteria 6489
186 Ga0501044_0001968 3300049823 Bacteria 23773
187 nmdc:mga00v17_183057_c1 3300050491 Bacteria 1352
188 nmdc:mga0k408_641_c2 3300050493 Bacteria 18568
189 nmdc:mga07m45_23127_c1 3300050496 Bacteria 3395
190 nmdc:mga09592_8189_c1 3300050508 Bacteria 8499
191 nmdc:mga0qj67_71024_c1 3300050509 Bacteria 2778
192 nmdc:mga08y16_3792_c1 3300050511 Bacteria 15742
193 Ga0500610_0000853 3300053079 Bacteria 9757
194 Ga0500578_0037432 3300053086 Bacteria 3116
195 Ga0500644_0001232 3300053088 Bacteria 7072
196 Ga0500646_0022060 3300053090 Bacteria 1701
197 Ga0500651_0000180 3300053093 Bacteria 41015
198 Ga0500651_0088802 3300053093 Bacteria 1906
199 Ga0500641_0060511 3300053096 Bacteria 1576
200 Ga0500650_0020918 3300053098 Bacteria 2877
201 Ga0500571_000246 3300053110 Bacteria 20455
202 Ga0500593_000105 3300053117 Bacteria 32307
203 Ga0500593_000781 3300053117 Bacteria 11874
204 Ga0500597_007955 3300053120 Bacteria 3634
205 Ga0500607_001380 3300053121 Bacteria 21969
206 Ga0500621_051001 3300053126 Bacteria 1675
207 Ga0500628_001857 3300053129 Bacteria 3565
208 Ga0500642_0007916 3300053130 Bacteria 3601
209 Ga0500652_001554 3300053131 Bacteria 7013
210 Ga0500655_000414 3300053133 Bacteria 8968
211 Ga0500658_0000397 3300053134 Bacteria 18932
212 Ga0500658_0000407 3300053134 Bacteria 18703
213 Ga0500559_0000038 3300053136 Bacteria 109922
214 Ga0500559_0026996 3300053136 Bacteria 2449
215 Ga0500561_0007588 3300053137 Bacteria 2121
216 Ga0500568_0001478 3300053139 Bacteria 15055
217 Ga0500568_0007472 3300053139 Bacteria 5358
218 Ga0500616_0004312 3300053153 Bacteria 10203
219 Ga0500619_000027 3300053154 Bacteria 48298
220 Ga0500622_0000142 3300053156 Bacteria 76275
221 Ga0500622_0001771 3300053156 Bacteria 16539
222 Ga0500627_0000775 3300053158 Bacteria 8507
223 Ga0500638_009539 3300053162 Bacteria 4206
224 Ga0500645_000661 3300053730 Bacteria 21613
225 Ga0500645_001225 3300053730 Bacteria 13527
226 Ga0500645_006124 3300053730 Bacteria 4331
227 Ga0500587_000318 3300053739 Bacteria 5404
228 Ga0500587_004537 3300053739 Bacteria 1904
229 2587728642 2585428057 Bacteria 6737412
230 2587732381 2585428058 Bacteria 6853932
231 2588291997 2588253510 Bacteria 6901809
232 2644060582 2643221609 Bacteria 6756331
233 2739247272 2738543012 Bacteria 7115078
234 2739249408 2738543013 Bacteria 5618633
235 2831867015 2831864461 Bacteria 6502356
236 2842738010 2842733646 Bacteria 5716726
237 2855732942 2855730933 Bacteria 7047938
238 2855771694 2855767633 Bacteria 7049357
239 2881415748 2881412998 Bacteria 6492157
240 2904545586 2904541872 Bacteria 8915136
241 2928086746 2928084124 Bacteria 7159212
242 2929168229 2929160207 Bacteria 9075316
243 2939634578 2939631187 Bacteria 6118131
244 Ga0068863_100049857
245 JGI25153J46596_10001547
246 Ga0055525_1000013
247 Ga0055526_1000623
248 Ga0055530_10006422
249 Ga0055531_10000312
250 Ga0055543_1003908
251 Ga0065165_1000070
252 Ga0065707_10102849
253 Ga0070658_10003541
254 Ga0070658_10206913
255 Ga0070670_100017564
256 Ga0068868_100215080
257 Ga0070669_100004036
258 Ga0070675_100007049
259 Ga0070671_100120557
260 Ga0070673_100135262
261 Ga0070667_100003367
262 Ga0070667_100207849
263 Ga0068867_100006849
264 Ga0068853_100012992
265 Ga0070672_100001669
266 Ga0070665_100091204
267 Ga0070665_100128680
268 Ga0068852_100009075
269 Ga0068859_100162007
270 Ga0068861_100014672
271 Ga0068860_100006915
272 Ga0068862_100018570
273 Ga0081539_10015143
274 Ga0075362_10008110
275 Ga0075367_10037690
276 Ga0075369_10052456
277 Ga0075366_10001959
278 Ga0075366_10006197
279 Ga0075366_10015597
280 Ga0097621_100021399
281 Ga0075370_10031020
282 Ga0068871_100033503
283 Ga0075428_100002960
284 Ga0075430_100080268
285 Ga0075429_100007863
286 Ga0068865_100021570
287 Ga0097620_100162005
288 Ga0111539_10004114
289 Ga0105242_10001602
290 Ga0105248_10001312
291 Ga0105248_10032838
292 Ga0105249_10001991
293 Ga0163162_10010523
294 Ga0157372_10012110
295 Ga0157375_10065429
296 Ga0157375_10098773
297 Ga0157380_10146175
298 Ga0157379_10010911
299 Ga0157379_10025743
300 Ga0157379_10180890
301 Ga0157376_10145810
302 Ga0183362_10002
303 Ga0209563_100025
304 Ga0209025_1000019
305 Ga0209025_1000029
306 Ga0209564_1000218
307 Ga0209758_1000268
308 Ga0209050_1002737
309 Ga0209050_1003658
310 Ga0209051_1001437
311 Ga0209257_1000015
312 Ga0207652_10189903
313 Ga0207681_10006022
314 Ga0207694_10026221
315 Ga0207659_10020280
316 Ga0207664_10136896
317 Ga0207644_10011943
318 Ga0207704_10009638
319 Ga0207704_10020826
320 Ga0207691_10025240
321 Ga0207691_10047385
322 Ga0207691_10047703
323 Ga0207691_10075596
324 Ga0207711_10004798
325 Ga0207711_10057777
326 Ga0207667_10089537
327 Ga0207651_10179176
328 Ga0207712_10040383
329 Ga0207658_10001976
330 Ga0207677_10185284
331 Ga0207678_10135852
332 Ga0207708_10054960
333 Ga0207648_10003527
334 Ga0207648_10055260
335 Ga0207676_10061982
336 Ga0207675_100000401
337 Ga0207683_10042626
338 Ga0207683_10061942
339 Ga0207698_10009676
340 Ga0207428_10011349
341 Ga0268266_10061007
342 Ga0268265_10107989
343 Ga0268264_10048065
344 Ga0268264_10049280
345 Ga0307517_10109097
346 Ga0307515_10000051
347 Ga0307515_10000093
348 Ga0307515_10000204
349 Ga0307515_10000651
350 Ga0307515_10064322
351 Ga0307512_10039531
352 Ga0265329_10012586
353 Ga0265327_10001335
354 Ga0307513_10000104
355 Ga0307513_10000113
356 Ga0307513_10010357
357 Ga0307509_10001413
358 Ga0307509_10089327
359 Ga0307408_100001530
360 Ga0307408_100026681
361 Ga0265314_10003637
362 Ga0265342_10014425
363 Ga0307516_10016192
364 Ga0307405_10027912
365 Ga0307406_10000141
366 Ga0307412_10044843
367 Ga0307510_10041027
368 Ga0307510_10118686
369 Ga0373925_0008608
370 Ga0395899_0010596
371 Ga0395899_0033266
372 Ga0395900_0034767
373 Ga0395900_0109892
374 Ga0395898_0003041
375 Ga0395905_0000389
376 Ga0395905_0009941
377 Ga0395905_0016504
378 Ga0395905_0045547
379 Ga0395905_0255278
380 Ga0395905_0289723
381 Ga0395901_0083780
382 Ga0395901_0148025
383 Ga0395901_0296477
384 Ga0451793_0707324
385 Ga0451835_0271180
386 Ga0451577_0001779
387 Ga0495627_030589
388 Ga0495592_0000262
389 Ga0495631_0000082
390 Ga0495632_0002553
391 Ga0495637_0002629
392 Ga0495663_0028504
393 Ga0495642_0058400
394 Ga0495586_0055917
395 Ga0495621_0024827
396 Ga0495656_0000047
397 Ga0495625_0036214
398 Ga0495646_0007763
399 Ga0495649_0006431
400 Ga0495676_0005431
401 Ga0495684_0040082
402 Ga0495686_0011103
403 Ga0495593_0004074
404 Ga0496101_0040358
405 Ga0496102_0006139
406 Ga0496104_0019273
407 Ga0496105_0006380
408 Ga0496106_0076815
409 Ga0496108_0068716
410 Ga0496110_0019162
411 Ga0496112_0062520
412 Ga0496113_0031926
413 Ga0496116_0007313
414 Ga0496116_0037004
415 Ga0496117_0044046
416 Ga0496121_0007783
417 Ga0496121_0012676
418 Ga0496122_0000272
419 Ga0496123_0000221
420 Ga0496123_0071611
421 Ga0496124_0033936
422 Ga0501033_0028411
423 Ga0501034_0041307
424 Ga0501037_0118938
425 Ga0501039_0067537
426 Ga0501043_0103843
427 Ga0501047_0006267
428 Ga0501035_0018114
429 Ga0501044_0001968
430 nmdc:mga00v17_183057_c1
431 nmdc:mga0k408_641_c2
432 nmdc:mga07m45_23127_c1
433 nmdc:mga09592_8189_c1
434 nmdc:mga0qj67_71024_c1
435 nmdc:mga08y16_3792_c1
436 Ga0500610_0000853
437 Ga0500578_0037432
438 Ga0500644_0001232
439 Ga0500646_0022060
440 Ga0500651_0000180
441 Ga0500651_0088802
442 Ga0500641_0060511
443 Ga0500650_0020918
444 Ga0500571_000246
445 Ga0500593_000105
446 Ga0500593_000781
447 Ga0500597_007955
448 Ga0500607_001380
449 Ga0500621_051001
450 Ga0500628_001857
451 Ga0500642_0007916
452 Ga0500652_001554
453 Ga0500655_000414
454 Ga0500658_0000397
455 Ga0500658_0000407
456 Ga0500559_0000038
457 Ga0500559_0026996
458 Ga0500561_0007588
459 Ga0500568_0001478
460 Ga0500568_0007472
461 Ga0500616_0004312
462 Ga0500619_000027
463 Ga0500622_0000142
464 Ga0500622_0001771
465 Ga0500627_0000775
466 Ga0500638_009539
467 Ga0500645_000661
468 Ga0500645_001225
469 Ga0500645_006124
470 Ga0500587_000318
471 Ga0500587_004537
472 2587728642
473 2587732381
474 2588291997
475 2644060582
476 2739247272
477 2739249408
478 2831867015
479 2842738010
480 2855732942
481 2855771694
482 2881415748
483 2904545586
484 2928086746
485 2929168229
486 2939634578

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03972

MmgE_PrpD_N

MmgE/PrpD N-terminal domain

36

278

0.98

PF19305

MmgE_PrpD_C

MmgE/PrpD C-terminal domain

296

459

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
6r6t-assembly1.cif.gz_A crystal structure of mouse cis-aconitate decarboxylase 0.8567 14 456
6r6t-assembly1.cif.gz_B crystal structure of mouse cis-aconitate decarboxylase 0.8534 16 454
2hp0-assembly1.cif.gz_A crystal structure of iminodisuccinate epimerase 0.8523 17 451
6r6u-assembly1.cif.gz_B crystal structure of human cis-aconitate decarboxylase 0.8504 16 454
7br9-assembly1.cif.gz_A crystal structure of mus musculus irg1 0.8453 16 454
ID Description Score Start End Superfamily
af_A0A2R8RL39_271_404_1.10.4100.10 Mainly Alpha;Orthogonal Bundle;2-methylcitrate dehydratase PrpD;2-methylcitrate dehydratase PrpD 0.907 283 401 1.10.4100.10
1szqB02 Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;2-methylcitrate dehydratase PrpD 0.877 285 402 3.30.1330.120
5mviA02 Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;2-methylcitrate dehydratase PrpD 0.8529 278 402 3.30.1330.120
af_O06582_313_451_3.30.1330.120 Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;2-methylcitrate dehydratase PrpD 0.8528 286 399 3.30.1330.120
af_Q23540_37_144_3.10.450.50 Alpha Beta;Roll;Nuclear Transport Factor 2; Chain: A,; 0.8345 381 397 3.10.450.50
ID Description Score Start End GO Terms
AF-H0TIG0-F1-model_v4 MmgE/PrpD family protein 0.9439 17 455 GO:0016829
AF-A0A2W7IHW3-F1-model_v4 2-methylcitrate dehydratase PrpD 0.9336 16 456 GO:0016829
AF-H0TIG0-F1-model_v4 MmgE/PrpD family protein 0.9335 17 455 GO:0016829
AF-A0A7C4I2W7-F1-model_v4 MmgE/PrpD family protein 0.9318 16 455 GO:0016829
AF-A0A419G6X2-F1-model_v4 MmgE/PrpD family protein 0.9317 16 456 GO:0016829

Map