F355446

General Info

Members Datasets Scaffolds Average Seq Length
243 183 486 322

Family's Representative Sequence

Representative Sequence 3300005937|Ga0081455_10000733|Ga0081455_1000073337
Length 376
Sequence MATERPAFTDTSRDRRFMKLALALAERQLGTTAPNPAVGCVIVQGDAIVGRAATARGGRPHAETLALAQAREAARGATAYVSLEPCAHQGVTPPCADALLAANIGRVVVALEDPDSRVAGRGVARLREAGLAVDVGCCADEAKSLNAGFLLRVKTGRPLVTLKIASSLDGRIALKSGESQWITGDAARALGHFLRATHDAILIGSGTALADDPSLTCRLPGLESRTPVRVVADGRLRLSPQSQLARTANAHPTWCLTRADADENRHATLSALGVEIIPVAPAPDGGLDPQALLAALGARGITRLLVEGGARLGTALLRADLVDRLAWFRGNLLIGGDGVPAVSSLVDLKLADALRWRPVSSRGIGQDRVDFYEAKA

Samples

Sample ID Description Type Environment
1 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
2 3300000041 Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis cpr5 old rhizosphere Metagenome Rhizosphere
3 3300000043 Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis cpr5 young rhizosphere Metagenome Rhizosphere
4 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
5 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
6 3300002070 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4 Metagenome Rhizosphere
7 3300002074 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1 Metagenome Rhizosphere
8 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
9 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
10 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
11 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
12 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
13 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
14 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
15 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
16 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
17 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
18 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
19 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
20 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
21 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
22 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
23 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
24 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
25 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
26 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
27 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
28 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
29 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
30 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
31 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
32 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
33 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
34 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
35 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
36 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
37 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
38 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
39 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
40 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
41 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
42 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
43 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
44 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
45 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
46 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
47 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
48 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
49 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
50 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
51 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
52 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
53 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
54 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
55 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
56 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
57 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
58 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
59 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
60 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
61 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
62 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
63 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
64 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
65 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
66 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
67 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
68 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
69 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
70 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
72 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
73 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
74 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
75 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
76 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
77 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
78 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
118 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
119 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
120 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
121 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
122 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
123 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
124 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
125 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
126 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
127 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
128 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
129 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
130 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
131 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
132 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
133 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
134 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
135 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
136 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
137 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
138 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
139 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
140 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
141 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
142 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
143 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
144 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
145 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
146 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
147 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
148 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
149 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
150 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
151 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
152 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
153 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
154 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
155 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
156 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
157 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
158 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
159 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
160 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
161 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
162 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
163 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
164 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
165 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
166 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
167 3300049664 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_A_2_drought Metagenome Rhizosphere
168 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
169 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
170 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
171 3300049853 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought Metagenome Rhizosphere
172 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
173 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
174 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
175 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
176 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
177 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
178 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
179 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
180 2643221622 Sphingomonas sp. Root241 Isolate Unclassified
181 2818991466 Sphingomonas trueperi 1152a Isolate Unclassified
182 2928968154 Sphingomonas trueperi 1075 Isolate Unclassified
183 8057101203 Sphingomonas lycopersici MMSM20 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.35
Metatranscriptomes 0
Isolates 1.65

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.11
Nodule 0
Rhizoplane 2.47
Rhizosphere 77.78
Stem 0
Stem Tuber 0
Unclassified 0.41

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0081455_10000733 3300005937 Bacteria 42613
2 ARcpr5oldR_c000591 3300000041 Bacteria 4460
3 ARcpr5yngRDRAFT_c000960 3300000043 Bacteria 3313
4 JGI24736J21556_1000068 3300001904 Bacteria 16954
5 JGI24735J21928_10002471 3300002067 Bacteria 6422
6 JGI24750J21931_1000247 3300002070 Bacteria 9259
7 JGI24748J21848_1000047 3300002074 Bacteria 57881
8 JGI24738J21930_10004381 3300002075 Bacteria 3464
9 JGI24034J26672_10000014 3300002239 Bacteria 139881
10 JGI25165J46597_1000566 3300003214 Bacteria 33479
11 JGI25153J46596_10004414 3300003215 Bacteria 7592
12 rootL2_10239495 3300003322 Bacteria 1819
13 Ga0055542_1003106 3300003762 Bacteria 4749
14 Ga0055537_1001497 3300003773 Bacteria 8988
15 Ga0055524_1000405 3300003775 Bacteria 36783
16 Ga0055531_10003371 3300003794 Bacteria 10216
17 Ga0065165_1002998 3300005262 Bacteria 12792
18 Ga0065165_1003039 3300005262 Bacteria 12613
19 Ga0070658_10030843 3300005327 Bacteria 4306
20 Ga0070658_10113493 3300005327 Bacteria 2247
21 Ga0070658_10169869 3300005327 Bacteria 1832
22 Ga0070690_100000004 3300005330 Bacteria 144000
23 Ga0070670_100104286 3300005331 Bacteria 2442
24 Ga0070677_10000114 3300005333 Bacteria 26571
25 Ga0070666_10000011 3300005335 Bacteria 261736
26 Ga0070666_10109065 3300005335 Bacteria 1913
27 Ga0070680_100000033 3300005336 Bacteria 70320
28 Ga0068868_100000006 3300005338 Bacteria 123358
29 Ga0070660_100000448 3300005339 Bacteria 27431
30 Ga0070660_100011655 3300005339 Bacteria 6258
31 Ga0070660_100175257 3300005339 Bacteria 1734
32 Ga0070689_100024210 3300005340 Bacteria 4552
33 Ga0070668_100023781 3300005347 Bacteria 4637
34 Ga0070669_100000009 3300005353 Bacteria 224683
35 Ga0070675_100009549 3300005354 Bacteria 7547
36 Ga0070671_100057985 3300005355 Bacteria 3223
37 Ga0070671_100062455 3300005355 Bacteria 3102
38 Ga0070688_100007381 3300005365 Bacteria 5923
39 Ga0070659_100000005 3300005366 Bacteria 259902
40 Ga0070667_100000144 3300005367 Bacteria 89681
41 Ga0070667_100026263 3300005367 Bacteria 4843
42 Ga0070663_100151786 3300005455 Bacteria 1777
43 Ga0070662_100052070 3300005457 Bacteria 2958
44 Ga0070662_100159990 3300005457 Bacteria 1761
45 Ga0070662_100297080 3300005457 Bacteria 1311
46 Ga0070681_10000002 3300005458 Bacteria 821814
47 Ga0070685_10000970 3300005466 Bacteria 15426
48 Ga0070679_100222638 3300005530 Bacteria 1847
49 Ga0068853_100011153 3300005539 Bacteria 7291
50 Ga0068853_100037898 3300005539 Bacteria 4105
51 Ga0068853_100101493 3300005539 Bacteria 2544
52 Ga0070686_100000001 3300005544 Bacteria 515830
53 Ga0070686_100000475 3300005544 Bacteria 24312
54 Ga0070665_100000004 3300005548 Bacteria 785500
55 Ga0070665_100000043 3300005548 Bacteria 279774
56 Ga0068855_100000024 3300005563 Bacteria 184241
57 Ga0068855_100106025 3300005563 Bacteria 3230
58 Ga0068855_100431751 3300005563 Bacteria 1440
59 Ga0068857_100028014 3300005577 Bacteria 4969
60 Ga0068854_100004603 3300005578 Bacteria 8702
61 Ga0068854_100316773 3300005578 Bacteria 1266
62 Ga0068856_100028558 3300005614 Bacteria 5447
63 Ga0068856_100032528 3300005614 Bacteria 5106
64 Ga0068852_100000330 3300005616 Bacteria 32172
65 Ga0068852_100056715 3300005616 Bacteria 3387
66 Ga0068861_100009695 3300005719 Bacteria 6657
67 Ga0068851_10098063 3300005834 Bacteria 1551
68 Ga0068863_100000010 3300005841 Bacteria 237758
69 Ga0068858_100000370 3300005842 Bacteria 47225
70 Ga0068858_100007787 3300005842 Bacteria 10341
71 Ga0068860_100000030 3300005843 Bacteria 256364
72 Ga0068860_100107884 3300005843 Bacteria 2661
73 Ga0068862_100000421 3300005844 Bacteria 45988
74 Ga0068862_100030859 3300005844 Bacteria 4519
75 Ga0075370_10065884 3300006353 Bacteria 2066
76 Ga0105240_10034571 3300009093 Bacteria 6517
77 Ga0105245_10065312 3300009098 Bacteria 3291
78 Ga0105247_10006451 3300009101 Bacteria 7266
79 Ga0105248_10000015 3300009177 Bacteria 322959
80 Ga0105237_10063930 3300009545 Bacteria 3676
81 Ga0105238_10003120 3300009551 Bacteria 16531
82 Ga0105238_10042190 3300009551 Bacteria 4620
83 Ga0105238_10201515 3300009551 Bacteria 1966
84 Ga0105249_10000016 3300009553 Bacteria 278643
85 Ga0105239_10047180 3300010375 Bacteria 4720
86 Ga0105239_10628812 3300010375 Unclassified 1225
87 Ga0157373_10090412 3300013100 Bacteria 2156
88 Ga0157373_10098083 3300013100 Bacteria 2062
89 Ga0157370_10010383 3300013104 Bacteria 9818
90 Ga0157372_10020631 3300013307 Bacteria 7111
91 Ga0157380_10000586 3300014326 Bacteria 22483
92 Ga0157380_10237522 3300014326 Bacteria 1641
93 Ga0157379_10027722 3300014968 Bacteria 5042
94 Ga0163161_10000037 3300017792 Bacteria 150124
95 Ga0213876_10009222 3300021384 Bacteria 5314
96 Ga0207425_1008689 3300025245 Bacteria 2578
97 Ga0209148_1000522 3300025254 Bacteria 37888
98 Ga0209233_1000143 3300025261 Bacteria 191568
99 Ga0209565_1000029 3300025263 Bacteria 340335
100 Ga0209673_1003845 3300025273 Bacteria 8482
101 Ga0209758_1001963 3300025297 Bacteria 22239
102 Ga0209050_1002277 3300025298 Bacteria 16987
103 Ga0209256_1000008 3300025299 Bacteria 975723
104 Ga0209257_1000893 3300025304 Bacteria 41890
105 Ga0209257_1011961 3300025304 Bacteria 4088
106 Ga0207682_10000210 3300025893 Bacteria 26438
107 Ga0207680_10000008 3300025903 Bacteria 518177
108 Ga0207680_10052328 3300025903 Bacteria 2446
109 Ga0207647_10001032 3300025904 Bacteria 21566
110 Ga0207647_10063244 3300025904 Bacteria 2251
111 Ga0207705_10127779 3300025909 Bacteria 1890
112 Ga0207654_10009066 3300025911 Bacteria 5047
113 Ga0207707_10000002 3300025912 Bacteria 1142054
114 Ga0207695_10002292 3300025913 Bacteria 28581
115 Ga0207671_10003090 3300025914 Bacteria 16968
116 Ga0207660_10000025 3300025917 Bacteria 69889
117 Ga0207657_10001193 3300025919 Bacteria 27632
118 Ga0207657_10086754 3300025919 Bacteria 2619
119 Ga0207657_10126023 3300025919 Bacteria 2103
120 Ga0207652_10000053 3300025921 Bacteria 118700
121 Ga0207652_10065311 3300025921 Bacteria 3151
122 Ga0207681_10000020 3300025923 Bacteria 240498
123 Ga0207694_10002158 3300025924 Bacteria 16167
124 Ga0207694_10080881 3300025924 Bacteria 2551
125 Ga0207650_10229686 3300025925 Bacteria 1496
126 Ga0207659_10006342 3300025926 Bacteria 7241
127 Ga0207644_10000154 3300025931 Bacteria 49572
128 Ga0207644_10010615 3300025931 Bacteria 6073
129 Ga0207690_10000002 3300025932 Bacteria 807473
130 Ga0207690_10000033 3300025932 Bacteria 149705
131 Ga0207690_10023534 3300025932 Bacteria 3844
132 Ga0207690_10170821 3300025932 Bacteria 1629
133 Ga0207690_10206174 3300025932 Bacteria 1496
134 Ga0207706_10038804 3300025933 Bacteria 4224
135 Ga0207706_10045686 3300025933 Bacteria 3879
136 Ga0207706_10203367 3300025933 Bacteria 1737
137 Ga0207686_10088707 3300025934 Bacteria 2037
138 Ga0207670_10032300 3300025936 Bacteria 3365
139 Ga0207711_10000003 3300025941 Bacteria 1042791
140 Ga0207711_10000005 3300025941 Bacteria 822972
141 Ga0207711_10000009 3300025941 Bacteria 580864
142 Ga0207667_10029721 3300025949 Bacteria 5920
143 Ga0207667_10068653 3300025949 Bacteria 3690
144 Ga0207712_10000009 3300025961 Bacteria 518177
145 Ga0207668_10007480 3300025972 Bacteria 6496
146 Ga0207668_10222105 3300025972 Bacteria 1518
147 Ga0207640_10000118 3300025981 Bacteria 59872
148 Ga0207658_10031331 3300025986 Bacteria 3774
149 Ga0207677_10002272 3300026023 Bacteria 10095
150 Ga0207703_10000379 3300026035 Bacteria 47532
151 Ga0207639_10000313 3300026041 Bacteria 34326
152 Ga0207639_10006347 3300026041 Bacteria 8030
153 Ga0207639_10020174 3300026041 Bacteria 4768
154 Ga0207639_10059514 3300026041 Bacteria 2943
155 Ga0207639_10426280 3300026041 Bacteria 1200
156 Ga0207678_10008347 3300026067 Bacteria 9134
157 Ga0207678_10025939 3300026067 Bacteria 5114
158 Ga0207702_10002808 3300026078 Bacteria 16302
159 Ga0207702_10011467 3300026078 Bacteria 7386
160 Ga0207702_10046760 3300026078 Bacteria 3644
161 Ga0207641_10000333 3300026088 Bacteria 57821
162 Ga0207676_10006714 3300026095 Bacteria 8140
163 Ga0207674_10033497 3300026116 Bacteria 5378
164 Ga0207675_100000652 3300026118 Bacteria 34149
165 Ga0207698_10000213 3300026142 Bacteria 36104
166 Ga0207698_10023598 3300026142 Bacteria 4299
167 Ga0207698_10055055 3300026142 Bacteria 3063
168 Ga0268266_10000002 3300028379 Bacteria 3059047
169 Ga0268266_10000009 3300028379 Bacteria 1097737
170 Ga0268265_10000149 3300028380 Bacteria 86376
171 Ga0268264_10000003 3300028381 Bacteria 1141976
172 Ga0268264_10253572 3300028381 Bacteria 1636
173 Ga0265334_10011157 3300028573 Bacteria 3788
174 Ga0265318_10000025 3300028577 Bacteria 159237
175 Ga0265338_10000869 3300028800 Bacteria 51220
176 Ga0265325_10000112 3300031241 Bacteria 55792
177 Ga0265340_10020997 3300031247 Bacteria 3349
178 Ga0265339_10001618 3300031249 Bacteria 16654
179 Ga0265331_10007992 3300031250 Bacteria 6052
180 Ga0265316_10033702 3300031344 Bacteria 4168
181 Ga0265313_10006930 3300031595 Bacteria 7873
182 Ga0307508_10000363 3300031616 Bacteria 55049
183 Ga0265342_10033106 3300031712 Bacteria 3181
184 Ga0307411_10246694 3300032005 Bacteria 1402
185 Ga0395905_0061476 3300037471 Bacteria 3514
186 Ga0395905_0075297 3300037471 Bacteria 3164
187 Ga0400485_10729 3300038735 Bacteria 3783
188 Ga0400486_30507 3300038742 Bacteria 3280
189 Ga0436365_1797404 3300039437 Bacteria 129057
190 Ga0439461_0000005 3300041410 Bacteria 28399
191 Ga0439465_0001051 3300041413 Bacteria 8793
192 Ga0439431_0001645 3300041997 Bacteria 4940
193 Ga0439442_002001 3300042002 Bacteria 4008
194 Ga0439445_0015742 3300042004 Bacteria 1855
195 Ga0439448_0007866 3300042005 Bacteria 3101
196 Ga0439432_004626 3300042006 Bacteria 5010
197 Ga0439462_0005964 3300042015 Bacteria 3018
198 Ga0439434_0004085 3300042435 Bacteria 4262
199 Ga0466957_0270669 3300044842 Bacteria 1134
200 Ga0495627_025333 3300046453 Bacteria 1925
201 Ga0495666_0035910 3300046526 Bacteria 2414
202 Ga0495645_0134127 3300046543 Bacteria 1733
203 Ga0495623_0117597 3300046679 Bacteria 1605
204 Ga0495670_0000019 3300046691 Bacteria 114488
205 Ga0495675_0065636 3300047444 Bacteria 2295
206 Ga0496100_0237345 3300048903 Bacteria 1344
207 Ga0496102_0019360 3300048905 Bacteria 5995
208 Ga0496103_0003782 3300048906 Bacteria 9205
209 Ga0496105_0047805 3300048908 Bacteria 3531
210 Ga0496106_0025956 3300048909 Bacteria 4359
211 Ga0496111_0194704 3300048914 Bacteria 1507
212 Ga0496117_0004411 3300048920 Bacteria 15546
213 Ga0496117_0074950 3300048920 Bacteria 2250
214 Ga0496118_0001632 3300048921 Bacteria 33061
215 Ga0496118_0016787 3300048921 Bacteria 6693
216 Ga0496118_0057173 3300048921 Bacteria 2926
217 Ga0496120_0138706 3300048923 Bacteria 1237
218 Ga0496121_0000163 3300048924 Bacteria 145648
219 Ga0496122_0008248 3300048925 Bacteria 11302
220 Ga0496123_0001339 3300048926 Bacteria 34831
221 Ga0496124_0002400 3300048927 Bacteria 24607
222 Ga0496125_0169051 3300048928 Bacteria 1473
223 Ga0496126_0495741 3300048929 Bacteria 977
224 Ga0501034_0048093 3300049571 Bacteria 4305
225 Ga0501070_0099074 3300049586 Bacteria 2411
226 Ga0501223_000135 3300049663 Bacteria 20935
227 Ga0501224_000042 3300049664 Bacteria 22403
228 Ga0501233_001241 3300049668 Bacteria 4345
229 Ga0501225_0000134 3300049705 Bacteria 22398
230 Ga0501080_0036840 3300049742 Bacteria 4566
231 Ga0501226_000099 3300049853 Bacteria 21088
232 nmdc:mga07m45_62907_c1 3300050496 Bacteria 2104
233 Ga0500643_001114 3300053087 Bacteria 16085
234 Ga0500658_0001803 3300053134 Bacteria 8450
235 Ga0500559_0001311 3300053136 Bacteria 14356
236 Ga0500568_0011946 3300053139 Bacteria 4007
237 Ga0500577_0025343 3300053142 Bacteria 2006
238 Ga0500616_0035947 3300053153 Bacteria 2691
239 Ga0500619_000638 3300053154 Bacteria 5946
240 2644127362 2643221622 Bacteria 4212502
241 2819715565 2818991466 Bacteria 4748179
242 2928970928 2928968154 Bacteria 4633371
243 8057105332 8057101203 Bacteria 5034064
244 Ga0081455_10000733
245 ARcpr5oldR_c000591
246 ARcpr5yngRDRAFT_c000960
247 JGI24736J21556_1000068
248 JGI24735J21928_10002471
249 JGI24750J21931_1000247
250 JGI24748J21848_1000047
251 JGI24738J21930_10004381
252 JGI24034J26672_10000014
253 JGI25165J46597_1000566
254 JGI25153J46596_10004414
255 rootL2_10239495
256 Ga0055542_1003106
257 Ga0055537_1001497
258 Ga0055524_1000405
259 Ga0055531_10003371
260 Ga0065165_1002998
261 Ga0065165_1003039
262 Ga0070658_10030843
263 Ga0070658_10113493
264 Ga0070658_10169869
265 Ga0070690_100000004
266 Ga0070670_100104286
267 Ga0070677_10000114
268 Ga0070666_10000011
269 Ga0070666_10109065
270 Ga0070680_100000033
271 Ga0068868_100000006
272 Ga0070660_100000448
273 Ga0070660_100011655
274 Ga0070660_100175257
275 Ga0070689_100024210
276 Ga0070668_100023781
277 Ga0070669_100000009
278 Ga0070675_100009549
279 Ga0070671_100057985
280 Ga0070671_100062455
281 Ga0070688_100007381
282 Ga0070659_100000005
283 Ga0070667_100000144
284 Ga0070667_100026263
285 Ga0070663_100151786
286 Ga0070662_100052070
287 Ga0070662_100159990
288 Ga0070662_100297080
289 Ga0070681_10000002
290 Ga0070685_10000970
291 Ga0070679_100222638
292 Ga0068853_100011153
293 Ga0068853_100037898
294 Ga0068853_100101493
295 Ga0070686_100000001
296 Ga0070686_100000475
297 Ga0070665_100000004
298 Ga0070665_100000043
299 Ga0068855_100000024
300 Ga0068855_100106025
301 Ga0068855_100431751
302 Ga0068857_100028014
303 Ga0068854_100004603
304 Ga0068854_100316773
305 Ga0068856_100028558
306 Ga0068856_100032528
307 Ga0068852_100000330
308 Ga0068852_100056715
309 Ga0068861_100009695
310 Ga0068851_10098063
311 Ga0068863_100000010
312 Ga0068858_100000370
313 Ga0068858_100007787
314 Ga0068860_100000030
315 Ga0068860_100107884
316 Ga0068862_100000421
317 Ga0068862_100030859
318 Ga0075370_10065884
319 Ga0105240_10034571
320 Ga0105245_10065312
321 Ga0105247_10006451
322 Ga0105248_10000015
323 Ga0105237_10063930
324 Ga0105238_10003120
325 Ga0105238_10042190
326 Ga0105238_10201515
327 Ga0105249_10000016
328 Ga0105239_10047180
329 Ga0105239_10628812
330 Ga0157373_10090412
331 Ga0157373_10098083
332 Ga0157370_10010383
333 Ga0157372_10020631
334 Ga0157380_10000586
335 Ga0157380_10237522
336 Ga0157379_10027722
337 Ga0163161_10000037
338 Ga0213876_10009222
339 Ga0207425_1008689
340 Ga0209148_1000522
341 Ga0209233_1000143
342 Ga0209565_1000029
343 Ga0209673_1003845
344 Ga0209758_1001963
345 Ga0209050_1002277
346 Ga0209256_1000008
347 Ga0209257_1000893
348 Ga0209257_1011961
349 Ga0207682_10000210
350 Ga0207680_10000008
351 Ga0207680_10052328
352 Ga0207647_10001032
353 Ga0207647_10063244
354 Ga0207705_10127779
355 Ga0207654_10009066
356 Ga0207707_10000002
357 Ga0207695_10002292
358 Ga0207671_10003090
359 Ga0207660_10000025
360 Ga0207657_10001193
361 Ga0207657_10086754
362 Ga0207657_10126023
363 Ga0207652_10000053
364 Ga0207652_10065311
365 Ga0207681_10000020
366 Ga0207694_10002158
367 Ga0207694_10080881
368 Ga0207650_10229686
369 Ga0207659_10006342
370 Ga0207644_10000154
371 Ga0207644_10010615
372 Ga0207690_10000002
373 Ga0207690_10000033
374 Ga0207690_10023534
375 Ga0207690_10170821
376 Ga0207690_10206174
377 Ga0207706_10038804
378 Ga0207706_10045686
379 Ga0207706_10203367
380 Ga0207686_10088707
381 Ga0207670_10032300
382 Ga0207711_10000003
383 Ga0207711_10000005
384 Ga0207711_10000009
385 Ga0207667_10029721
386 Ga0207667_10068653
387 Ga0207712_10000009
388 Ga0207668_10007480
389 Ga0207668_10222105
390 Ga0207640_10000118
391 Ga0207658_10031331
392 Ga0207677_10002272
393 Ga0207703_10000379
394 Ga0207639_10000313
395 Ga0207639_10006347
396 Ga0207639_10020174
397 Ga0207639_10059514
398 Ga0207639_10426280
399 Ga0207678_10008347
400 Ga0207678_10025939
401 Ga0207702_10002808
402 Ga0207702_10011467
403 Ga0207702_10046760
404 Ga0207641_10000333
405 Ga0207676_10006714
406 Ga0207674_10033497
407 Ga0207675_100000652
408 Ga0207698_10000213
409 Ga0207698_10023598
410 Ga0207698_10055055
411 Ga0268266_10000002
412 Ga0268266_10000009
413 Ga0268265_10000149
414 Ga0268264_10000003
415 Ga0268264_10253572
416 Ga0265334_10011157
417 Ga0265318_10000025
418 Ga0265338_10000869
419 Ga0265325_10000112
420 Ga0265340_10020997
421 Ga0265339_10001618
422 Ga0265331_10007992
423 Ga0265316_10033702
424 Ga0265313_10006930
425 Ga0307508_10000363
426 Ga0265342_10033106
427 Ga0307411_10246694
428 Ga0395905_0061476
429 Ga0395905_0075297
430 Ga0400485_10729
431 Ga0400486_30507
432 Ga0436365_1797404
433 Ga0439461_0000005
434 Ga0439465_0001051
435 Ga0439431_0001645
436 Ga0439442_002001
437 Ga0439445_0015742
438 Ga0439448_0007866
439 Ga0439432_004626
440 Ga0439462_0005964
441 Ga0439434_0004085
442 Ga0466957_0270669
443 Ga0495627_025333
444 Ga0495666_0035910
445 Ga0495645_0134127
446 Ga0495623_0117597
447 Ga0495670_0000019
448 Ga0495675_0065636
449 Ga0496100_0237345
450 Ga0496102_0019360
451 Ga0496103_0003782
452 Ga0496105_0047805
453 Ga0496106_0025956
454 Ga0496111_0194704
455 Ga0496117_0004411
456 Ga0496117_0074950
457 Ga0496118_0001632
458 Ga0496118_0016787
459 Ga0496118_0057173
460 Ga0496120_0138706
461 Ga0496121_0000163
462 Ga0496122_0008248
463 Ga0496123_0001339
464 Ga0496124_0002400
465 Ga0496125_0169051
466 Ga0496126_0495741
467 Ga0501034_0048093
468 Ga0501070_0099074
469 Ga0501223_000135
470 Ga0501224_000042
471 Ga0501233_001241
472 Ga0501225_0000134
473 Ga0501080_0036840
474 Ga0501226_000099
475 nmdc:mga07m45_62907_c1
476 Ga0500643_001114
477 Ga0500658_0001803
478 Ga0500559_0001311
479 Ga0500568_0011946
480 Ga0500577_0025343
481 Ga0500616_0035947
482 Ga0500619_000638
483 2644127362
484 2819715565
485 2928970928
486 8057105332

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01872

RibD_C

RibD C-terminal domain

158

369

0.92

PF00383

dCMP_cyt_deam_1

Cytidine and deoxycytidylate deaminase zinc-binding region

11

111

0.88

PF14437

MafB19-deam

MafB19-like deaminase

12

151

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
2hxv-assembly1.cif.gz_A-2 crystal structure of a diaminohydroxyphosphoribosylaminopyrimidine deaminase/ 5-amino-6-(5-phosphoribosylamino)uracil reductase (tm1828) from thermotoga maritima at 1.80 a resolution 0.8792 1 317
2hxv-assembly1.cif.gz_A-2 crystal structure of a diaminohydroxyphosphoribosylaminopyrimidine deaminase/ 5-amino-6-(5-phosphoribosylamino)uracil reductase (tm1828) from thermotoga maritima at 1.80 a resolution 0.8766 1 317
1wpl-assembly1.cif.gz_K crystal structure of the inhibitory form of rat gtp cyclohydrolase i/gfrp complex 0.8706 291 317
8dq9-assembly1.cif.gz_B crystal structure of gdp bound 3-dehydroquinate dehydratase i from klebsiella oxytoca 0.8455 6 317
8dqb-assembly1.cif.gz_A crystal structure of 3-dehydroquinate dehydratase i from klebsiella oxytoca (i23 form) 0.8439 4 317
ID Description Score Start End Superfamily
4g3mB01 Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 0.9665 6 138 3.40.140.10
af_Q8GWP5_63_211_3.40.140.10 Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 0.9652 6 143 3.40.140.10
af_P9WPH1_1_147_3.40.140.10 Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 0.9518 6 143 3.40.140.10
2obcB01 Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 0.9476 7 138 3.40.140.10
4g3mB01 Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 0.932 6 138 3.40.140.10
ID Description Score Start End GO Terms
AF-A0A4Q5NX58-F1-model_v4 Riboflavin biosynthesis protein RibD 0.9874 3 102 GO:0008270
GO:0008835
AF-A0A379FM68-F1-model_v4 diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) 0.984 6 122 GO:0008270
GO:0008835
GO:0009231
AF-A0A6D0ET81-F1-model_v4 diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) 0.9837 5 129 GO:0008270
GO:0008835
GO:0009231
GO:0016491
AF-A0A258C7Q3-F1-model_v4 diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) 0.9836 5 129 GO:0008270
GO:0008835
GO:0009231
AF-A0A0K9TB55-F1-model_v4 deleted 0.9803 5 145

Map