F355587

General Info

Members Datasets Scaffolds Average Seq Length
243 193 486 341

Family's Representative Sequence

Representative Sequence 3300013104|Ga0157370_10023552|Ga0157370_100235522
Length 381
Sequence LREADVGILGVAFKRAKASIGVEASYCRQACSKIRRSRTPMNLTNVAIRQLQDAPFPDFVTRPAIDSLVTEARKRLDRDGPHDEAAFAREMAQRAIAEHTDAANQQHYELPPEFFQLCLGKRLKYSCCLYPTGRETLDQAEEAALAETCAHADLKDGQTILEMGCGWGSLSLWMAETYPKSKITAVSNSHGQRGHIEAQAAARGLTNLTVITQDMNAFDTEQRFDRIVSVEMFEHMANWRALLTKARNWLTPDGRMFIHVFTHRNAPYRFDHTDSGDFIAQHFFTGGVMPSHGLIRQFPDLFTVEQEWTWNGGHYAKTADDWLANMDRNAARIAVLMRETYGDDAKLWTRRWRRFYLATAGLFGNDEGRTWAVSHYRLKPA

Samples

Sample ID Description Type Environment
1 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
2 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
3 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
4 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
5 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
6 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
7 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
8 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
9 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
12 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
13 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
14 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
15 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
16 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
17 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
18 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
19 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
20 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
21 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
22 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
23 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
24 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
25 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
26 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
27 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
28 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
29 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
30 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
31 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
32 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
33 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
34 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
35 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
37 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
38 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
39 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
40 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
41 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
42 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
43 3300012513 Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.old.250510 Metagenome Rhizosphere
44 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
45 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
46 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
47 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
48 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
49 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
50 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
51 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
53 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
73 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
74 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
78 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
79 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
80 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
81 3300030763 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
82 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
83 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
84 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
85 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
86 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
87 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
88 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
89 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
90 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
91 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
92 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
93 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
94 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
95 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
96 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
97 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
98 3300044659 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2E Metagenome Unclassified
99 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
100 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
101 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
102 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
103 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
104 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
105 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
106 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
107 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
108 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
109 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
110 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
111 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
112 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
113 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
114 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
115 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
116 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
117 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
118 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
119 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
124 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
126 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
127 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
130 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
131 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
133 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
134 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
135 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
136 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
137 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
138 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
139 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
140 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
141 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
142 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
143 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
144 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
145 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
146 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
147 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
148 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
149 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
150 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
151 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
152 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
153 3300053724 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 endosphere Metagenome Endosphere
154 2582581305 Rhizorhabdus wittichii YR128 Isolate Rhizosphere
155 2600255279 Rhizobium sp. NFIX01 Isolate Rhizoplane
156 2600255308 Rhizobium sp. NFIX02 Isolate Rhizoplane
157 2643221541 Sphingomonas sp. Root50 Isolate Unclassified
158 2643221551 Mesorhizobium sp. Root1471 Isolate Unclassified
159 2643221552 Caulobacter sp. Root1472 Isolate Unclassified
160 2643221555 Mesorhizobium sp. Root554 Isolate Unclassified
161 2643221574 Brevundimonas sp. Root608 Isolate Unclassified
162 2643221582 Rhizobium sp. Root651 Isolate Unclassified
163 2643221584 Caulobacter sp. Root656 Isolate Unclassified
164 2643221606 Sphingomonas sp. Root720 Isolate Unclassified
165 2643221671 Sphingomonas sp. Root1294 Isolate Unclassified
166 2643221699 Brevundimonas sp. Root1423 Isolate Unclassified
167 2643221736 Bosea sp. Root483D1 Isolate Unclassified
168 2791355267 Rhizobium sp. L18 Isolate Nodule
169 2818991439 Agrobacterium tumefaciens 1187 Isolate Unclassified
170 2838675328 Agrobacterium radiobacter SEMIA 410 Isolate Nodule
171 2838714209 Agrobacterium radiobacter SEMIA 435 Isolate Nodule
172 2838719591 Agrobacterium radiobacter SEMIA 436 Isolate Nodule
173 2838724970 Agrobacterium radiobacter SEMIA 437 Isolate Nodule
174 2842130223 Agrobacterium radiobacter SEMIA 441 Isolate Nodule
175 2842152218 Agrobacterium radiobacter SEMIA 457 Isolate Nodule
176 2842170452 Agrobacterium radiobacter SEMIA 461 Isolate Nodule
177 2842175837 Agrobacterium radiobacter SEMIA 462 Isolate Nodule
178 2842187318 Agrobacterium radiobacter SEMIA 464 Isolate Nodule
179 2842211629 Agrobacterium radiobacter SEMIA 472 Isolate Nodule
180 2842224351 Agrobacterium radiobacter SEMIA 480 Isolate Nodule
181 2919114240 Agrobacterium tumefaciens 1457 Isolate Rhizosphere
182 2926754445 Agrobacterium radiobacter SLBN-94 Isolate Rhizosphere
183 2928972540 Brevundimonas sp. 1080 Isolate Rhizosphere
184 2933006813 Rhizobium sp. SEMIA 439 Isolate Unclassified
185 2933594066 Agrobacterium fabrum 35/80 Isolate Nodule
186 2936381700 Rhizobium chutanense C16 Isolate Unclassified
187 2968117919 Mesorhizobium atlanticum CNPSo 3140 Isolate Unclassified
188 2977240413 Brevundimonas vesicularis SORGH_AS 431 Isolate Unclassified
189 2979100975 Agrobacterium pusense SORGH_AS 755 Isolate Unclassified
190 2984509177 Agrobacterium pusense SORGH_AS260 Isolate Aerial Root
191 2984518228 Agrobacterium pusense SORGH_AS285 Isolate Aerial Root
192 2984537506 Agrobacterium sp. SORGH_AS440 Isolate Aerial Root
193 2984601300 Rhizobium pusense SORGH_AS1083 Isolate Aerial Root

Type Distribution

Type Percentage (%)
Metagenomes 82.72
Metatranscriptomes 0.41
Isolates 16.87

Biome Distribution

Category Percentage (%)
Aerial Root 1.65
Bulb 0
Endosphere 15.23
Nodule 6.58
Rhizoplane 2.47
Rhizosphere 58.44
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0157370_10023552 3300013104 Bacteria 6111
2 JGI25157J39369_1001099 3300002741 Bacteria 12069
3 Ga0055526_1000090 3300003771 Bacteria 83051
4 Ga0055536_1000715 3300003781 Bacteria 22226
5 Ga0055531_10015695 3300003794 Bacteria 3318
6 Ga0070658_10025581 3300005327 Bacteria 4731
7 Ga0070690_100027482 3300005330 Bacteria 3517
8 Ga0070666_10024828 3300005335 Bacteria 3906
9 Ga0070661_100045345 3300005344 Bacteria 3214
10 Ga0070668_100001499 3300005347 Bacteria 16865
11 Ga0070668_100013015 3300005347 Bacteria 6195
12 Ga0070669_100034025 3300005353 Bacteria 3689
13 Ga0070671_100000163 3300005355 Bacteria 43833
14 Ga0070667_100000003 3300005367 Bacteria 447715
15 Ga0070667_100000016 3300005367 Bacteria 237028
16 Ga0070678_100003267 3300005456 Bacteria 9009
17 Ga0070679_100009225 3300005530 Bacteria 9322
18 Ga0070665_100001936 3300005548 Bacteria 23339
19 Ga0068857_100348152 3300005577 Bacteria 1372
20 Ga0068854_100007638 3300005578 Bacteria 6918
21 Ga0068852_100181728 3300005616 Bacteria 1978
22 Ga0068859_100009219 3300005617 Bacteria 9968
23 Ga0068864_100007520 3300005618 Bacteria 8975
24 Ga0068866_10034083 3300005718 Bacteria 2477
25 Ga0068851_10031456 3300005834 Bacteria 2636
26 Ga0068863_100000662 3300005841 Bacteria 34791
27 Ga0068863_100013169 3300005841 Bacteria 7980
28 Ga0068863_100015702 3300005841 Bacteria 7270
29 Ga0068863_100090679 3300005841 Bacteria 2898
30 Ga0068858_100000527 3300005842 Bacteria 40114
31 Ga0068858_100032752 3300005842 Bacteria 4826
32 Ga0068860_100000045 3300005843 Bacteria 223252
33 Ga0068860_100000196 3300005843 Bacteria 97096
34 Ga0068860_100033243 3300005843 Bacteria 4950
35 Ga0068862_100000095 3300005844 Bacteria 105957
36 Ga0068862_100000385 3300005844 Bacteria 47562
37 Ga0075364_10108821 3300006051 Bacteria 1849
38 Ga0070715_10099392 3300006163 Bacteria 1354
39 Ga0075362_10040476 3300006177 Bacteria 2052
40 Ga0075366_10129463 3300006195 Bacteria 1523
41 Ga0097621_100011289 3300006237 Bacteria 6577
42 Ga0068871_100090724 3300006358 Bacteria 2545
43 Ga0068865_100125465 3300006881 Bacteria 1915
44 Ga0097620_100009219 3300006931 Bacteria 9968
45 Ga0099826_10003095 3300006948 Bacteria 11133
46 Ga0105240_10082457 3300009093 Bacteria 3949
47 Ga0105240_10098064 3300009093 Bacteria 3570
48 Ga0105240_10132708 3300009093 Bacteria 2985
49 Ga0105240_10534506 3300009093 Bacteria 1299
50 Ga0105245_10062308 3300009098 Bacteria 3365
51 Ga0105242_10039460 3300009176 Bacteria 3800
52 Ga0105242_10528599 3300009176 Bacteria 1127
53 Ga0105237_10034625 3300009545 Bacteria 5113
54 Ga0105237_10421144 3300009545 Bacteria 1341
55 Ga0105238_10000295 3300009551 Bacteria 55173
56 Ga0105238_10137230 3300009551 Bacteria 2424
57 Ga0105239_10202818 3300010375 Bacteria 2222
58 Ga0157326_1000044 3300012513 Bacteria 11066
59 Ga0157369_10057633 3300013105 Bacteria 4190
60 Ga0157378_10037061 3300013297 Bacteria 4318
61 Ga0157378_10229060 3300013297 Bacteria 1770
62 Ga0157375_10126258 3300013308 Bacteria 2673
63 Ga0163161_10014131 3300017792 Bacteria 5561
64 Ga0209026_1000211 3300025250 Bacteria 81007
65 Ga0209759_1000208 3300025256 Bacteria 91006
66 Ga0209676_1000182 3300025292 Bacteria 146373
67 Ga0209676_1000520 3300025292 Bacteria 60418
68 Ga0209676_1006864 3300025292 Bacteria 5511
69 Ga0209051_1000664 3300025303 Bacteria 38581
70 Ga0209257_1000234 3300025304 Bacteria 129712
71 Ga0207710_10037545 3300025900 Bacteria 2139
72 Ga0207695_10304545 3300025913 Bacteria 1484
73 Ga0207695_10337985 3300025913 Bacteria 1394
74 Ga0207671_10308817 3300025914 Bacteria 1250
75 Ga0207649_10071691 3300025920 Bacteria 2214
76 Ga0207694_10000942 3300025924 Bacteria 25665
77 Ga0207650_10011109 3300025925 Bacteria 6193
78 Ga0207644_10000270 3300025931 Bacteria 34922
79 Ga0207667_10451008 3300025949 Bacteria 1307
80 Ga0207712_10000030 3300025961 Bacteria 216514
81 Ga0207668_10000030 3300025972 Bacteria 122797
82 Ga0207668_10129357 3300025972 Bacteria 1925
83 Ga0207658_10000002 3300025986 Bacteria 1364188
84 Ga0207658_10000075 3300025986 Bacteria 109004
85 Ga0207703_10001224 3300026035 Bacteria 23987
86 Ga0207678_10346388 3300026067 Bacteria 1281
87 Ga0207641_10000199 3300026088 Bacteria 81050
88 Ga0207641_10001366 3300026088 Bacteria 24146
89 Ga0207641_10002363 3300026088 Bacteria 17415
90 Ga0207641_10032420 3300026088 Bacteria 4337
91 Ga0207648_10012032 3300026089 Bacteria 8117
92 Ga0207676_10002146 3300026095 Bacteria 14259
93 Ga0207674_10016139 3300026116 Bacteria 8183
94 Ga0207674_10196499 3300026116 Bacteria 1967
95 Ga0207683_10002537 3300026121 Bacteria 15936
96 Ga0207698_10049316 3300026142 Bacteria 3204
97 Ga0209371_1000003 3300027312 Bacteria 1122971
98 Ga0209282_1000147 3300027666 Bacteria 41275
99 Ga0209282_1005731 3300027666 Bacteria 7660
100 Ga0268266_10000360 3300028379 Bacteria 70734
101 Ga0268265_10000132 3300028380 Bacteria 95410
102 Ga0268265_10000296 3300028380 Bacteria 55965
103 Ga0268264_10000087 3300028381 Bacteria 236696
104 Ga0268264_10000101 3300028381 Bacteria 225109
105 Ga0268264_10000783 3300028381 Bacteria 34834
106 Ga0307517_10101682 3300028786 Bacteria 2260
107 Ga0265338_10036785 3300028800 Bacteria 4676
108 Ga0268256_1000004 3300030500 Bacteria 1122967
109 Ga0316182_1142454 3300030745 Bacteria 1580
110 Ga0265763_1003118 3300030763 Bacteria 1304
111 Ga0265327_10006324 3300031251 Bacteria 9512
112 Ga0265316_10009573 3300031344 Bacteria 8907
113 Ga0307408_100012620 3300031548 Bacteria 5602
114 Ga0307408_100103594 3300031548 Bacteria 2172
115 Ga0307408_100185194 3300031548 Bacteria 1673
116 Ga0307405_10180470 3300031731 Bacteria 1515
117 Ga0307410_10031394 3300031852 Bacteria 3408
118 Ga0307406_10002480 3300031901 Bacteria 10062
119 Ga0307407_10008942 3300031903 Bacteria 4632
120 Ga0307412_10030968 3300031911 Bacteria 3374
121 Ga0307416_100555294 3300032002 Bacteria 1222
122 Ga0307411_10009244 3300032005 Bacteria 5167
123 Ga0373927_0090798 3300035695 Bacteria 1984
124 Ga0373925_0214936 3300037068 Bacteria 1533
125 Ga0395900_0069843 3300037418 Bacteria 3611
126 Ga0436364_0017273 3300037853 Bacteria 44478
127 Ga0436364_0860802 3300037853 Bacteria 13430
128 Ga0237819_04550 3300038705 Bacteria 2270
129 Ga0436363_1663439 3300039450 Bacteria 2523
130 Ga0466973_0257457 3300044659 Bacteria 1220
131 Ga0495638_0015086 3300046460 Bacteria 5198
132 Ga0495607_0056114 3300046501 Bacteria 2262
133 Ga0495606_0058725 3300046507 Bacteria 2471
134 Ga0495637_0005303 3300046520 Bacteria 6590
135 Ga0495643_0001810 3300046522 Bacteria 18248
136 Ga0495643_0081699 3300046522 Bacteria 1680
137 Ga0495633_0001747 3300046558 Bacteria 16154
138 Ga0495669_0099887 3300046684 Bacteria 1347
139 Ga0495649_0000915 3300046694 Bacteria 23328
140 Ga0495686_0000162 3300047472 Bacteria 126699
141 Ga0495686_0000753 3300047472 Bacteria 42718
142 Ga0495686_0040412 3300047472 Bacteria 2975
143 Ga0496101_0125221 3300048904 Bacteria 1947
144 Ga0496106_0005153 3300048909 Bacteria 9685
145 Ga0496107_0000036 3300048910 Bacteria 79369
146 Ga0496110_0241718 3300048913 Bacteria 1643
147 Ga0496116_0002628 3300048919 Bacteria 18634
148 Ga0496116_0070830 3300048919 Bacteria 2211
149 Ga0496121_0000833 3300048924 Bacteria 56021
150 Ga0496121_0020172 3300048924 Bacteria 6616
151 Ga0496121_0071862 3300048924 Bacteria 2781
152 Ga0496122_0008183 3300048925 Bacteria 11365
153 Ga0496123_0001927 3300048926 Bacteria 27057
154 Ga0496124_0004220 3300048927 Bacteria 16917
155 Ga0496125_0000631 3300048928 Bacteria 59156
156 Ga0496126_0006508 3300048929 Bacteria 13000
157 Ga0496126_0278950 3300048929 Bacteria 1385
158 Ga0501031_0007823 3300049568 Bacteria 6959
159 Ga0501032_0000019 3300049569 Bacteria 155168
160 Ga0501033_0000204 3300049570 Bacteria 56743
161 Ga0501033_0000605 3300049570 Bacteria 33278
162 Ga0501033_0004576 3300049570 Bacteria 11077
163 Ga0501034_0000130 3300049571 Bacteria 139568
164 Ga0501036_0005080 3300049572 Bacteria 10648
165 Ga0501037_0000237 3300049573 Bacteria 47415
166 Ga0501038_0000117 3300049574 Bacteria 67257
167 Ga0501039_0000028 3300049575 Bacteria 139568
168 Ga0501043_0000126 3300049579 Bacteria 70672
169 Ga0501046_0059528 3300049580 Bacteria 2992
170 Ga0501047_0088065 3300049581 Bacteria 2982
171 Ga0501070_0001254 3300049586 Bacteria 22740
172 Ga0501035_0000143 3300049822 Bacteria 86821
173 Ga0501035_0000181 3300049822 Bacteria 76816
174 Ga0501035_0000398 3300049822 Bacteria 49830
175 Ga0501035_0220451 3300049822 Bacteria 1620
176 Ga0501044_0022255 3300049823 Bacteria 6756
177 nmdc:mga00v17_258566_c1 3300050491 Bacteria 1129
178 nmdc:mga0k408_176468_c1 3300050493 Bacteria 1274
179 nmdc:mga06z11_40950_c1 3300050494 Bacteria 2315
180 nmdc:mga0sz30_23445_c1 3300050516 Bacteria 2511
181 Ga0500635_0000425 3300053080 Bacteria 12378
182 Ga0500643_000613 3300053087 Bacteria 24307
183 Ga0500644_0001174 3300053088 Bacteria 7516
184 Ga0500651_0024171 3300053093 Bacteria 3809
185 Ga0500651_0027888 3300053093 Bacteria 3551
186 Ga0500641_0014577 3300053096 Bacteria 2902
187 Ga0500595_015161 3300053119 Bacteria 2898
188 Ga0500608_000015 3300053122 Bacteria 83850
189 Ga0500608_039239 3300053122 Bacteria 2267
190 Ga0500614_005249 3300053123 Bacteria 2719
191 Ga0500655_000070 3300053133 Bacteria 27417
192 Ga0500559_0003637 3300053136 Bacteria 7543
193 Ga0500559_0077180 3300053136 Bacteria 1509
194 Ga0500568_0038976 3300053139 Bacteria 1921
195 Ga0500573_0000051 3300053140 Bacteria 95469
196 Ga0500590_002815 3300053148 Bacteria 7857
197 Ga0500616_0000002 3300053153 Bacteria 1611257
198 Ga0500622_0000586 3300053156 Bacteria 33061
199 Ga0500622_0004866 3300053156 Bacteria 8220
200 Ga0500622_0041950 3300053156 Bacteria 2379
201 Ga0500639_054553 3300053163 Bacteria 2076
202 Ga0500570_000067 3300053724 Bacteria 27420
203 2585262074 2582581305 Bacteria 4895574
204 2601610204 2600255279 Bacteria 5605316
205 2601746978 2600255308 Bacteria 5611129
206 2643730581 2643221541 Bacteria 5498788
207 2643777021 2643221551 Bacteria 3750538
208 2643781014 2643221552 Bacteria 5708754
209 2643795469 2643221555 Bacteria 3749717
210 2643884239 2643221574 Bacteria 2789653
211 2643921673 2643221582 Bacteria 5804683
212 2643929277 2643221584 Bacteria 5511711
213 2644043750 2643221606 Bacteria 5588032
214 2644393909 2643221671 Bacteria 5496681
215 2644549581 2643221699 Bacteria 5731501
216 2644552293 2643221699 Bacteria 5731501
217 2644747810 2643221736 Bacteria 6608466
218 2793365022 2791355267 Bacteria 7222458
219 2819557122 2818991439 Bacteria 6907412
220 2838675904 2838675328 Bacteria 4909118
221 2838714786 2838714209 Bacteria 5525906
222 2838721413 2838719591 Bacteria 5523910
223 2838725546 2838724970 Bacteria 4908691
224 2842130799 2842130223 Bacteria 4909145
225 2842154031 2842152218 Bacteria 4908957
226 2842171030 2842170452 Bacteria 5525737
227 2842177651 2842175837 Bacteria 4908771
228 2842187895 2842187318 Bacteria 5524014
229 2842212206 2842211629 Bacteria 5523832
230 2842226175 2842224351 Bacteria 5524473
231 2919114877 2919114240 Bacteria 5700270
232 2926755841 2926754445 Bacteria 5964435
233 2928975523 2928972540 Bacteria 3058286
234 2933008676 2933006813 Bacteria 4912075
235 2933596723 2933594066 Bacteria 5594265
236 2936387127 2936381700 Bacteria 7006523
237 2968119990 2968117919 Bacteria 6536078
238 2977241554 2977240413 Bacteria 3191065
239 2979102153 2979100975 Bacteria 5423623
240 2984509898 2984509177 Bacteria 5274802
241 2984519404 2984518228 Bacteria 5277463
242 2984538238 2984537506 Bacteria 5277481
243 2984604991 2984601300 Bacteria 5455244
244 Ga0157370_10023552
245 JGI25157J39369_1001099
246 Ga0055526_1000090
247 Ga0055536_1000715
248 Ga0055531_10015695
249 Ga0070658_10025581
250 Ga0070690_100027482
251 Ga0070666_10024828
252 Ga0070661_100045345
253 Ga0070668_100001499
254 Ga0070668_100013015
255 Ga0070669_100034025
256 Ga0070671_100000163
257 Ga0070667_100000003
258 Ga0070667_100000016
259 Ga0070678_100003267
260 Ga0070679_100009225
261 Ga0070665_100001936
262 Ga0068857_100348152
263 Ga0068854_100007638
264 Ga0068852_100181728
265 Ga0068859_100009219
266 Ga0068864_100007520
267 Ga0068866_10034083
268 Ga0068851_10031456
269 Ga0068863_100000662
270 Ga0068863_100013169
271 Ga0068863_100015702
272 Ga0068863_100090679
273 Ga0068858_100000527
274 Ga0068858_100032752
275 Ga0068860_100000045
276 Ga0068860_100000196
277 Ga0068860_100033243
278 Ga0068862_100000095
279 Ga0068862_100000385
280 Ga0075364_10108821
281 Ga0070715_10099392
282 Ga0075362_10040476
283 Ga0075366_10129463
284 Ga0097621_100011289
285 Ga0068871_100090724
286 Ga0068865_100125465
287 Ga0097620_100009219
288 Ga0099826_10003095
289 Ga0105240_10082457
290 Ga0105240_10098064
291 Ga0105240_10132708
292 Ga0105240_10534506
293 Ga0105245_10062308
294 Ga0105242_10039460
295 Ga0105242_10528599
296 Ga0105237_10034625
297 Ga0105237_10421144
298 Ga0105238_10000295
299 Ga0105238_10137230
300 Ga0105239_10202818
301 Ga0157326_1000044
302 Ga0157369_10057633
303 Ga0157378_10037061
304 Ga0157378_10229060
305 Ga0157375_10126258
306 Ga0163161_10014131
307 Ga0209026_1000211
308 Ga0209759_1000208
309 Ga0209676_1000182
310 Ga0209676_1000520
311 Ga0209676_1006864
312 Ga0209051_1000664
313 Ga0209257_1000234
314 Ga0207710_10037545
315 Ga0207695_10304545
316 Ga0207695_10337985
317 Ga0207671_10308817
318 Ga0207649_10071691
319 Ga0207694_10000942
320 Ga0207650_10011109
321 Ga0207644_10000270
322 Ga0207667_10451008
323 Ga0207712_10000030
324 Ga0207668_10000030
325 Ga0207668_10129357
326 Ga0207658_10000002
327 Ga0207658_10000075
328 Ga0207703_10001224
329 Ga0207678_10346388
330 Ga0207641_10000199
331 Ga0207641_10001366
332 Ga0207641_10002363
333 Ga0207641_10032420
334 Ga0207648_10012032
335 Ga0207676_10002146
336 Ga0207674_10016139
337 Ga0207674_10196499
338 Ga0207683_10002537
339 Ga0207698_10049316
340 Ga0209371_1000003
341 Ga0209282_1000147
342 Ga0209282_1005731
343 Ga0268266_10000360
344 Ga0268265_10000132
345 Ga0268265_10000296
346 Ga0268264_10000087
347 Ga0268264_10000101
348 Ga0268264_10000783
349 Ga0307517_10101682
350 Ga0265338_10036785
351 Ga0268256_1000004
352 Ga0316182_1142454
353 Ga0265763_1003118
354 Ga0265327_10006324
355 Ga0265316_10009573
356 Ga0307408_100012620
357 Ga0307408_100103594
358 Ga0307408_100185194
359 Ga0307405_10180470
360 Ga0307410_10031394
361 Ga0307406_10002480
362 Ga0307407_10008942
363 Ga0307412_10030968
364 Ga0307416_100555294
365 Ga0307411_10009244
366 Ga0373927_0090798
367 Ga0373925_0214936
368 Ga0395900_0069843
369 Ga0436364_0017273
370 Ga0436364_0860802
371 Ga0237819_04550
372 Ga0436363_1663439
373 Ga0466973_0257457
374 Ga0495638_0015086
375 Ga0495607_0056114
376 Ga0495606_0058725
377 Ga0495637_0005303
378 Ga0495643_0001810
379 Ga0495643_0081699
380 Ga0495633_0001747
381 Ga0495669_0099887
382 Ga0495649_0000915
383 Ga0495686_0000162
384 Ga0495686_0000753
385 Ga0495686_0040412
386 Ga0496101_0125221
387 Ga0496106_0005153
388 Ga0496107_0000036
389 Ga0496110_0241718
390 Ga0496116_0002628
391 Ga0496116_0070830
392 Ga0496121_0000833
393 Ga0496121_0020172
394 Ga0496121_0071862
395 Ga0496122_0008183
396 Ga0496123_0001927
397 Ga0496124_0004220
398 Ga0496125_0000631
399 Ga0496126_0006508
400 Ga0496126_0278950
401 Ga0501031_0007823
402 Ga0501032_0000019
403 Ga0501033_0000204
404 Ga0501033_0000605
405 Ga0501033_0004576
406 Ga0501034_0000130
407 Ga0501036_0005080
408 Ga0501037_0000237
409 Ga0501038_0000117
410 Ga0501039_0000028
411 Ga0501043_0000126
412 Ga0501046_0059528
413 Ga0501047_0088065
414 Ga0501070_0001254
415 Ga0501035_0000143
416 Ga0501035_0000181
417 Ga0501035_0000398
418 Ga0501035_0220451
419 Ga0501044_0022255
420 nmdc:mga00v17_258566_c1
421 nmdc:mga0k408_176468_c1
422 nmdc:mga06z11_40950_c1
423 nmdc:mga0sz30_23445_c1
424 Ga0500635_0000425
425 Ga0500643_000613
426 Ga0500644_0001174
427 Ga0500651_0024171
428 Ga0500651_0027888
429 Ga0500641_0014577
430 Ga0500595_015161
431 Ga0500608_000015
432 Ga0500608_039239
433 Ga0500614_005249
434 Ga0500655_000070
435 Ga0500559_0003637
436 Ga0500559_0077180
437 Ga0500568_0038976
438 Ga0500573_0000051
439 Ga0500590_002815
440 Ga0500616_0000002
441 Ga0500622_0000586
442 Ga0500622_0004866
443 Ga0500622_0041950
444 Ga0500639_054553
445 Ga0500570_000067
446 2585262074
447 2601610204
448 2601746978
449 2643730581
450 2643777021
451 2643781014
452 2643795469
453 2643884239
454 2643921673
455 2643929277
456 2644043750
457 2644393909
458 2644549581
459 2644552293
460 2644747810
461 2793365022
462 2819557122
463 2838675904
464 2838714786
465 2838721413
466 2838725546
467 2842130799
468 2842154031
469 2842171030
470 2842177651
471 2842187895
472 2842212206
473 2842226175
474 2919114877
475 2926755841
476 2928975523
477 2933008676
478 2933596723
479 2936387127
480 2968119990
481 2977241554
482 2979102153
483 2984509898
484 2984519404
485 2984538238
486 2984604991

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13649

Methyltransf_25

Methyltransferase domain

160

254

0.97

PF08241

Methyltransf_11

Methyltransferase domain

161

258

0.94

PF13847

Methyltransf_31

Methyltransferase domain

154

284

0.92

PF02353

CMAS

Mycolic acid cyclopropane synthetase

96

367

0.88

PF08242

Methyltransf_12

Methyltransferase domain

161

256

0.88

PF05175

MTS

Methyltransferase small domain

133

273

0.85

PF13489

Methyltransf_23

Methyltransferase domain

136

303

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
6gky-assembly1.cif.gz_A-2 crystal structure of coclaurine n-methyltransferase (cnmt) bound to n-methylheliamine and sah 0.9493 4 341
5kok-assembly1.cif.gz_B pavine n-methyltransferase in complex with tetrahydropapaverine and s-adenosylhomocysteine ph 7.25 0.9323 6 342
6gky-assembly1.cif.gz_A-2 crystal structure of coclaurine n-methyltransferase (cnmt) bound to n-methylheliamine and sah 0.9307 4 341
5kpc-assembly1.cif.gz_B pavine n-methyltransferase h206a mutant in complex with s-adenosylmethionine ph 6 0.9262 21 342
6gkz-assembly2.cif.gz_C crystal structure of coclaurine n-methyltransferase (cnmt) bound to n-methylheliamine and sah 0.9259 6 340
ID Description Score Start End Superfamily
af_K7KE15_1_124_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9859 107 228 3.40.50.150
af_K7KE15_1_124_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9625 107 228 3.40.50.150
af_Q8I3G1_737_866_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9057 118 193 3.40.50.150
af_A0A1D6EFY7_537_616_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8887 114 176 3.40.50.150
af_A0A1D6GTC0_4_255_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8803 59 320 3.40.50.150
ID Description Score Start End GO Terms
AF-T1C0A8-F1-model_v4 Cyclopropane-fatty-acyl-phospholipid synthase 0.9718 44 342
AF-A0A2E5I3R6-F1-model_v4 SAM-dependent methyltransferase 0.97 5 344 GO:0008168
GO:0032259
AF-A0A519EMP3-F1-model_v4 Phosphonoacetaldehyde hydrolase (Phosphonatase) (EC 3.11.1.1) (Phosphonoacetaldehyde phosphonohydrolase) 0.9687 8 344 GO:0000287
GO:0019700
GO:0050194
AF-A0A7W4W3L0-F1-model_v4 Cyclopropane-fatty-acyl-phospholipid synthase (EC 2.1.1.79) 0.9672 9 342 GO:0008825
GO:0032259
AF-A0A2S9NTZ1-F1-model_v4 deleted 0.9638 1 344

Map