F355592

General Info

Members Datasets Scaffolds Average Seq Length
243 204 209 589

Family's Representative Sequence

Representative Sequence 3300013105|Ga0157369_10008025|Ga0157369_1000802512
Length 651
Sequence MEHKTLRPPAISSCQQLLLSPTQVDPARLIRHSYPAVVSAFGHVAVRTGQSKGIQMDTRSRLAPAGNHTRPDRSAASASAAPFRELDHAKEAMIARLTAGLSPAALGAAFSDWLIHLAAAPGKQLELASLWVLNTRRLADYCAHVSSGAYAPLPAEPSPKDDRFRADVWQTEPYRLWQQTFLLAEQWWNAATHEVPGTTRHHEDVVSFVARQLLDMLAPTNFPLTNPEVFQRAMSTAGLSLVQGAGNALEDATRQASGMPPAGLEQFKVGVNLAVTPGKVVFRNHLIELIQYSPTTDEVIAEPVLIVPAWIMKYYILDLSPQNSLIRYLVGQGHTVFCISWRNVDADDRDLSLEDYRQLGVMAALDTVSKIVPDHKIHATGYCLGGTLLSIAAAAMAGSGDHRLASVTLFAAQTDFTEPGELQLFIDDSEVYFLESMMWSQGYLDARQMAGAFQLLQSNDLIWSRIVHDYLLGERAPMIDLMAWNADATRMPYRMHSEYLRQLFLDNDLASGRYQVDARPISIRNIRAPMFVVGTERDHIAPWRSVYKIHDLADTAITFVLTSGGHNAGIVSEPGHPHRQFRIKETAADDLLVSPDEWMAAATQQEGSWWPVWSDWLKARSSPERVAPPAIRIEPGAHALADAPGTYVFQH

Samples

Sample ID Description Type Environment
1 2513237087 Azorhizobium doebereinerae UFLA1-100 Isolate Nodule
2 2516143018 Ensifer sp. BR816 Isolate Nodule
3 2582581308 Rhizobium sp. OK494 Isolate Rhizosphere
4 2582581315 Agrobacterium rhizogenes YR147 Isolate Rhizosphere
5 2582581866 Rhizobium sp. CF097 Isolate Rhizosphere
6 2585427527 Rhizobium lusitanum YR374 Isolate Rhizosphere
7 2585427530 Rhizobium tropici YR635 Isolate Rhizosphere
8 2615840626 Rhizobium lusitanum P1-7 Isolate Nodule
9 2657244999 Sinorhizobium sojae CCBAU 05684 Isolate Unclassified
10 2690316117 Sinorhizobium fredii CCBAU 45436 Isolate Unclassified
11 2721755763 Pandoraea thiooxydans ATSB16 Isolate Rhizosphere
12 2751185846 Paraburkholderia ribeironis STM 7296 Isolate Unclassified
13 2775507049 Rhizobium sp. ACO-34A Isolate Unclassified
14 2791355092 Sinorhizobium sp. NG07B Isolate Nodule
15 2791355094 Sinorhizobium sp. BJ1 Isolate Nodule
16 2802429268 Sinorhizobium sojae CCBAU 05684 Isolate Unclassified
17 2818991436 Collimonas arenae 515 Isolate Unclassified
18 2818991453 Rhizobium lusitanum 1158 Isolate Unclassified
19 2828305725 Xanthobacter tagetidis DSM 11105 Isolate Unclassified
20 2838074704 Sinorhizobium terangae SEMIA 6460 Isolate Unclassified
21 2847417321 Sinorhizobium fredii CCBAU 45436 Isolate Unclassified
22 2848992105 Sinorhizobium fredii CCBAU 25509 Isolate Unclassified
23 2855020534 Paracoccus endophyticus SYSUP0003 Isolate Stem Tuber
24 2855872281 Sinorhizobium fredii PCH1 Isolate Nodule
25 2896384573 Ensifer sp. MPMI2T Isolate Unclassified
26 2899803654 Agrobacterium sp. a22-2 Isolate Unclassified
27 2908739725 Bradyrhizobium sp. UFLA03-84 Isolate Nodule
28 2917699015 Bosea sp. F3-2 Isolate Rhizosphere
29 2920760137 Ensifer psoraleae CCBAU 65732 Isolate Unclassified
30 2920822456 Ensifer sesbaniae CCBAU 65729 Isolate Unclassified
31 2928115317 Pseudacidovorax sp. 1753 Isolate Rhizosphere
32 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
33 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
34 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
35 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
36 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
37 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
38 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
39 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
40 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
41 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
42 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
43 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
44 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
45 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
46 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
47 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
48 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
49 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
50 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
51 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
52 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
53 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
54 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
55 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
56 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
57 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
58 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
59 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
60 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
61 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
62 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
63 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
64 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
65 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
66 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
67 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
68 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
69 3300015685 Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.5_G12 Metagenome Unclassified
70 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
71 3300021327 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2 Metagenome Nodule
72 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
73 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
75 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
76 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
77 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
78 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
79 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
80 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
81 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
82 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
83 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300027614 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes) (version 2) Metagenome Rhizosphere
101 3300027617 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S AM (SPAdes) (version 2) Metagenome Rhizosphere
102 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
103 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
104 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
105 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
107 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
108 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
109 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
110 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
111 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
112 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
113 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
114 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
115 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
116 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
117 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
118 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
119 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
120 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
121 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
122 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
123 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
124 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
125 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
126 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
127 3300042437 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z081617_5554 Metagenome Rhizosphere
128 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
129 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
130 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
131 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
132 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
133 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
134 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
135 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
136 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
137 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
138 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
139 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
140 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
141 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
142 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
143 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
144 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
145 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
146 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
147 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
148 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
149 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
150 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
151 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
152 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
153 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
154 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
155 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
156 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
157 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
158 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
159 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
160 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
161 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
162 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
163 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
164 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
165 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
166 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
167 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
168 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
169 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
170 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
171 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
172 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
173 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
174 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
175 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
176 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
177 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
178 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
179 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
180 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
181 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
182 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
183 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
184 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
185 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
186 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
187 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
188 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
189 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
190 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
191 3300049759 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C13_A_4_drought Metagenome Rhizosphere
192 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
193 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
194 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
195 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
196 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
197 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
198 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
199 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
200 3300053141 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 endosphere Metagenome Endosphere
201 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
202 643692032 Sinorhizobium fredii NGR234 Isolate Nodule
203 8049293176 Ensifer alkalisoli YIC4027 Isolate Nodule
204 8054563764 Acuticoccus kalidii M5D2P5 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 86.01
Metatranscriptomes 0
Isolates 13.99

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.64
Nodule 4.12
Rhizoplane 2.88
Rhizosphere 69.55
Stem 0
Stem Tuber 0.41
Unclassified 14.4

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10000046 3300001979 Bacteria 40023
2 rootH1_10003373 3300003316 Bacteria 3997
3 Ga0055538_1002229 3300003751 Bacteria 2979
4 Ga0055533_1000492 3300003756 Bacteria 14612
5 Ga0055525_1000013 3300003759 Bacteria 440870
6 Ga0055542_1002740 3300003762 Bacteria 5373
7 Ga0055540_1007215 3300003792 Bacteria 4247
8 Ga0055541_1000269 3300003841 Bacteria 18205
9 Ga0070658_10000718 3300005327 Bacteria 28700
10 Ga0070670_100016421 3300005331 Bacteria 6357
11 Ga0070668_100013520 3300005347 Bacteria 6093
12 Ga0070669_100007256 3300005353 Bacteria 7954
13 Ga0070710_10008621 3300005437 Bacteria 4965
14 Ga0070711_100022777 3300005439 Bacteria 4065
15 Ga0070711_100025294 3300005439 Bacteria 3882
16 Ga0070700_100027216 3300005441 Bacteria 3388
17 Ga0070672_100007721 3300005543 Bacteria 7326
18 Ga0068866_10006756 3300005718 Bacteria 4784
19 Ga0068861_100103151 3300005719 Bacteria 2272
20 Ga0068870_10004189 3300005840 Bacteria 6193
21 Ga0068862_100004095 3300005844 Bacteria 12362
22 Ga0075363_100013350 3300006048 Bacteria 3978
23 Ga0070712_100003306 3300006175 Bacteria 9917
24 Ga0075362_10014915 3300006177 Bacteria 3149
25 Ga0075428_100042068 3300006844 Bacteria 5025
26 Ga0075433_10007561 3300006852 Bacteria 8619
27 Ga0075434_100007969 3300006871 Bacteria 9820
28 Ga0105240_10000336 3300009093 Bacteria 87900
29 Ga0111539_10048052 3300009094 Bacteria 5097
30 Ga0114129_10081512 3300009147 Bacteria 4497
31 Ga0105237_10000690 3300009545 Bacteria 46704
32 Ga0157370_10013080 3300013104 Bacteria 8565
33 Ga0157369_10008025 3300013105 Bacteria 12118
34 Ga0163162_10066571 3300013306 Bacteria 3651
35 Ga0182008_10025332 3300014497 Bacteria 3012
36 Ga0182006_1018339 3300015261 Bacteria 2959
37 Ga0182007_10001127 3300015262 Bacteria 14490
38 Ga0182005_1000327 3300015265 Bacteria 28182
39 Ga0183369_1014 3300015685 Bacteria 194173
40 Ga0163161_10032853 3300017792 Bacteria 3707
41 Ga0214543_1018387 3300021327 Bacteria 6438
42 Ga0213872_10001188 3300021361 Bacteria 17686
43 Ga0213872_10005024 3300021361 Bacteria 6867
44 Ga0209784_100180 3300025224 Bacteria 52470
45 Ga0209566_100476 3300025225 Bacteria 28454
46 Ga0209674_100116 3300025226 Bacteria 135937
47 Ga0209563_100025 3300025230 Bacteria 596456
48 Ga0209646_1000027 3300025246 Bacteria 395141
49 Ga0209677_100134 3300025253 Bacteria 69461
50 Ga0209677_101333 3300025253 Bacteria 10855
51 Ga0209148_1000019 3300025254 Bacteria 748518
52 Ga0209759_1006060 3300025256 Bacteria 4120
53 Ga0209233_1000162 3300025261 Bacteria 156508
54 Ga0209051_1000617 3300025303 Bacteria 40926
55 Ga0207682_10015274 3300025893 Bacteria 2988
56 Ga0207685_10012330 3300025905 Bacteria 2604
57 Ga0207645_10000508 3300025907 Bacteria 32214
58 Ga0207643_10004502 3300025908 Bacteria 7491
59 Ga0207705_10000496 3300025909 Bacteria 33626
60 Ga0207695_10000458 3300025913 Bacteria 88734
61 Ga0207671_10001879 3300025914 Bacteria 23343
62 Ga0207693_10016578 3300025915 Bacteria 5885
63 Ga0207663_10049545 3300025916 Bacteria 2606
64 Ga0207681_10006619 3300025923 Bacteria 7114
65 Ga0207690_10001700 3300025932 Bacteria 13546
66 Ga0207706_10001683 3300025933 Bacteria 21818
67 Ga0207665_10023910 3300025939 Bacteria 4025
68 Ga0207691_10000550 3300025940 Bacteria 37583
69 Ga0207668_10003441 3300025972 Bacteria 9286
70 Ga0207648_10001448 3300026089 Bacteria 26132
71 Ga0207675_100001525 3300026118 Bacteria 23219
72 Ga0209970_1004198 3300027614 Bacteria 2400
73 Ga0210002_1001764 3300027617 Bacteria 3080
74 Ga0209971_1000338 3300027682 Bacteria 12967
75 Ga0209998_10000168 3300027717 Bacteria 24295
76 Ga0209974_10000232 3300027876 Bacteria 18009
77 Ga0268265_10036588 3300028380 Bacteria 3596
78 Ga0268265_10075236 3300028380 Bacteria 2644
79 Ga0265328_10010017 3300031239 Bacteria 3833
80 Ga0265327_10007655 3300031251 Bacteria 8273
81 Ga0307408_100000156 3300031548 Bacteria 76233
82 Ga0307408_100056488 3300031548 Bacteria 2846
83 Ga0265313_10000004 3300031595 Bacteria 188027
84 Ga0307514_10000330 3300031649 Bacteria 113231
85 Ga0307412_10049480 3300031911 Bacteria 2770
86 Ga0307409_100146506 3300031995 Bacteria 2043
87 Ga0307416_100008054 3300032002 Bacteria 6755
88 Ga0373955_0009631 3300035172 Bacteria 4535
89 Ga0373927_0026871 3300035695 Bacteria 3761
90 Ga0373937_0093735 3300036401 Bacteria 2784
91 Ga0373937_0176472 3300036401 Bacteria 2006
92 Ga0373925_0101494 3300037068 Bacteria 2212
93 Ga0395899_0006129 3300037312 Bacteria 9319
94 Ga0395900_0000375 3300037418 Bacteria 64534
95 Ga0395900_0029903 3300037418 Bacteria 5591
96 Ga0395898_0000629 3300037466 Bacteria 64534
97 Ga0395898_0010651 3300037466 Bacteria 9604
98 Ga0395905_0000361 3300037471 Bacteria 64517
99 Ga0395901_0000273 3300038443 Bacteria 64425
100 Ga0436361_0320757 3300039447 Bacteria 82248
101 Ga0436361_0870063 3300039447 Bacteria 3224
102 Ga0436361_0981128 3300039447 Bacteria 9774
103 Ga0439446_0003966 3300042156 Bacteria 3722
104 Ga0450908_001235 3300042184 Bacteria 4956
105 Ga0439435_0001440 3300042436 Bacteria 4397
106 Ga0439444_0000712 3300042437 Bacteria 3928
107 Ga0495627_000008 3300046453 Bacteria 572150
108 Ga0495592_0000478 3300046454 Bacteria 29353
109 Ga0495629_0000205 3300046459 Bacteria 52685
110 Ga0495651_0003307 3300046462 Bacteria 12378
111 Ga0495651_0011316 3300046462 Bacteria 6856
112 Ga0495651_0046322 3300046462 Bacteria 3365
113 Ga0495653_0049202 3300046463 Bacteria 3249
114 Ga0495650_0000560 3300046471 Bacteria 52698
115 Ga0495580_0000419 3300046472 Bacteria 35257
116 Ga0495580_0000483 3300046472 Bacteria 33249
117 Ga0495639_0017168 3300046475 Bacteria 3144
118 Ga0495664_0060673 3300046477 Bacteria 2251
119 Ga0495608_0009586 3300046511 Bacteria 6758
120 Ga0495608_0031362 3300046511 Bacteria 3594
121 Ga0495608_0036646 3300046511 Bacteria 3301
122 Ga0495618_0046149 3300046514 Bacteria 2749
123 Ga0495618_0101257 3300046514 Bacteria 1844
124 Ga0495628_0001152 3300046516 Bacteria 24128
125 Ga0495628_0012451 3300046516 Bacteria 7173
126 Ga0495628_0028451 3300046516 Bacteria 4541
127 Ga0495628_0061492 3300046516 Bacteria 2945
128 Ga0495666_0005962 3300046526 Bacteria 6144
129 Ga0495642_0010605 3300046528 Bacteria 3528
130 Ga0495652_0002248 3300046529 Bacteria 20189
131 Ga0495652_0100886 3300046529 Bacteria 2341
132 Ga0495652_0104751 3300046529 Bacteria 2287
133 Ga0495652_0142117 3300046529 Bacteria 1886
134 Ga0495640_0011200 3300046533 Bacteria 6905
135 Ga0495645_0095546 3300046543 Bacteria 2118
136 Ga0495634_0035111 3300046642 Bacteria 3436
137 Ga0495635_0031958 3300046663 Bacteria 3653
138 Ga0495588_0048000 3300046674 Bacteria 2193
139 Ga0495657_0058356 3300046675 Bacteria 2563
140 Ga0495599_0003745 3300046678 Bacteria 8916
141 Ga0495623_0021500 3300046679 Bacteria 4165
142 Ga0495646_0019392 3300046680 Bacteria 4307
143 Ga0495646_0027180 3300046680 Bacteria 3590
144 Ga0495646_0045402 3300046680 Bacteria 2683
145 Ga0495613_0003691 3300046689 Bacteria 11479
146 Ga0495624_0000446 3300046690 Bacteria 32513
147 Ga0495624_0012122 3300046690 Bacteria 5904
148 Ga0495589_0015734 3300046794 Bacteria 3889
149 Ga0495600_0018481 3300046809 Bacteria 4442
150 Ga0495604_0044970 3300047317 Bacteria 3447
151 Ga0495604_0053092 3300047317 Bacteria 3135
152 Ga0495674_0013475 3300047319 Bacteria 7689
153 Ga0495674_0017544 3300047319 Bacteria 6662
154 Ga0495674_0070848 3300047319 Bacteria 3012
155 Ga0495680_0039504 3300047322 Bacteria 3764
156 Ga0495675_0033290 3300047444 Bacteria 3290
157 Ga0495593_0018092 3300047673 Bacteria 3963
158 Ga0495602_0023716 3300048088 Bacteria 5971
159 Ga0496101_0033719 3300048904 Bacteria 3613
160 Ga0496102_0000108 3300048905 Bacteria 117595
161 Ga0496102_0000614 3300048905 Bacteria 36967
162 Ga0496103_0001533 3300048906 Bacteria 15424
163 Ga0496104_0018248 3300048907 Bacteria 6400
164 Ga0496114_0031668 3300048917 Bacteria 4350
165 Ga0496115_0047239 3300048918 Bacteria 3442
166 Ga0496116_0008209 3300048919 Bacteria 9102
167 Ga0496117_0000987 3300048920 Bacteria 43572
168 Ga0496118_0000353 3300048921 Bacteria 77839
169 Ga0496119_0006659 3300048922 Bacteria 10625
170 Ga0496120_0000775 3300048923 Bacteria 46150
171 Ga0496121_0000536 3300048924 Bacteria 72166
172 Ga0496122_0001583 3300048925 Bacteria 35761
173 Ga0496122_0008564 3300048925 Bacteria 10998
174 Ga0496123_0001943 3300048926 Bacteria 26909
175 Ga0496123_0004184 3300048926 Bacteria 15419
176 Ga0496125_0013850 3300048928 Bacteria 7894
177 Ga0496126_0000196 3300048929 Bacteria 134394
178 Ga0496126_0000798 3300048929 Bacteria 56449
179 Ga0496126_0007234 3300048929 Bacteria 12211
180 Ga0501034_0138439 3300049571 Bacteria 2415
181 Ga0501038_0057253 3300049574 Bacteria 3347
182 Ga0501038_0084912 3300049574 Bacteria 2663
183 Ga0501040_0000024 3300049576 Bacteria 68873
184 Ga0501042_0000155 3300049578 Bacteria 30782
185 Ga0501042_0011818 3300049578 Bacteria 5899
186 Ga0501042_0012440 3300049578 Bacteria 5768
187 Ga0501042_0069408 3300049578 Bacteria 2520
188 Ga0501047_0001374 3300049581 Bacteria 23896
189 Ga0501067_0026252 3300049583 Bacteria 3227
190 Ga0501068_0013445 3300049584 Bacteria 4658
191 Ga0501072_0042443 3300049588 Bacteria 3573
192 Ga0501073_0001889 3300049589 Bacteria 15604
193 Ga0501075_0047916 3300049591 Bacteria 3211
194 Ga0501079_0053073 3300049741 Bacteria 3128
195 Ga0501081_0038230 3300049743 Bacteria 3277
196 Ga0501081_0058539 3300049743 Bacteria 2666
197 Ga0501083_0075723 3300049744 Bacteria 2235
198 Ga0501262_000061 3300049759 Bacteria 13263
199 Ga0501035_0004664 3300049822 Bacteria 13010
200 Ga0501035_0052004 3300049822 Bacteria 3666
201 Ga0501045_0013184 3300049824 Bacteria 5830
202 nmdc:mga03683_39136_c1 3300050489 Bacteria 1940
203 nmdc:mga0a205_34152_c1 3300050515 Bacteria 4880
204 Ga0495601_0040507 3300053077 Bacteria 2917
205 Ga0495619_0013891 3300053085 Bacteria 5081
206 Ga0500583_0021583 3300053092 Bacteria 2681
207 Ga0500595_001467 3300053119 Bacteria 12554
208 Ga0500574_001949 3300053141 Bacteria 3251
209 Ga0501082_0011972 3300060353 Bacteria 7459

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049583 Ga0501067_0026252 Ga0501067_0026252_72_1493 467
2 3300037068 Ga0373925_0101494 Ga0373925_0101494_17_1555 499
3 3300006175 Ga0070712_100003306 Ga0070712_1000033066 506
4 3300025915 Ga0207693_10016578 Ga0207693_100165785 506
5 3300050489 nmdc:mga03683_39136_c1 nmdc:mga03683_39136_c1_224_1897 524
6 3300006048 Ga0075363_100013350 Ga0075363_1000133503 530
7 3300049759 Ga0501262_000061 Ga0501262_000061_6540_8204 531
8 iso_pu_bacteria 2917699015 2917705553 531
9 3300046453 Ga0495627_000008 Ga0495627_000008_248025_249731 534
10 3300003759 Ga0055525_1000013 Ga0055525_1000013126 535
11 3300025230 Ga0209563_100025 Ga0209563_100025460 535
12 3300006177 Ga0075362_10014915 Ga0075362_100149153 537
13 3300039447 Ga0436361_0870063 Ga0436361_0870063_448_2130 537
14 3300049591 Ga0501075_0047916 Ga0501075_0047916_17_1693 540
15 3300053092 Ga0500583_0021583 Ga0500583_0021583_519_2390 540
16 3300046477 Ga0495664_0060673 Ga0495664_0060673_559_2226 542
17 3300031548 Ga0307408_100000156 Ga0307408_10000015658 544
18 3300031595 Ga0265313_10000004 Ga0265313_100000048 545
19 3300046680 Ga0495646_0019392 Ga0495646_0019392_84_1763 546
20 3300046462 Ga0495651_0046322 Ga0495651_0046322_50_1726 548
21 3300046529 Ga0495652_0142117 Ga0495652_0142117_47_1723 548
22 3300048925 Ga0496122_0001583 Ga0496122_0001583_14008_15744 549
23 3300048926 Ga0496123_0001943 Ga0496123_0001943_5134_6870 549
24 3300031239 Ga0265328_10010017 Ga0265328_100100171 550
25 3300046516 Ga0495628_0061492 Ga0495628_0061492_39_1733 550
26 3300049584 Ga0501068_0013445 Ga0501068_0013445_2709_4421 550
27 3300049589 Ga0501073_0001889 Ga0501073_0001889_6000_7712 550
28 3300049744 Ga0501083_0075723 Ga0501083_0075723_372_2084 550
29 3300005353 Ga0070669_100007256 Ga0070669_1000072568 551
30 3300005441 Ga0070700_100027216 Ga0070700_1000272162 551
31 3300005543 Ga0070672_100007721 Ga0070672_1000077212 551
32 3300005718 Ga0068866_10006756 Ga0068866_100067564 551
33 3300005719 Ga0068861_100103151 Ga0068861_1001031512 551
34 3300005840 Ga0068870_10004189 Ga0068870_100041892 551
35 3300005844 Ga0068862_100004095 Ga0068862_10000409511 551
36 3300006844 Ga0075428_100042068 Ga0075428_1000420683 551
37 3300006852 Ga0075433_10007561 Ga0075433_100075615 551
38 3300006871 Ga0075434_100007969 Ga0075434_1000079693 551
39 3300009094 Ga0111539_10048052 Ga0111539_100480525 551
40 3300009147 Ga0114129_10081512 Ga0114129_100815122 551
41 3300025893 Ga0207682_10015274 Ga0207682_100152742 551
42 3300025907 Ga0207645_10000508 Ga0207645_1000050818 551
43 3300025908 Ga0207643_10004502 Ga0207643_100045022 551
44 3300025923 Ga0207681_10006619 Ga0207681_100066197 551
45 3300025933 Ga0207706_10001683 Ga0207706_100016839 551
46 3300025940 Ga0207691_10000550 Ga0207691_1000055017 551
47 3300026089 Ga0207648_10001448 Ga0207648_1000144820 551
48 3300026118 Ga0207675_100001525 Ga0207675_10000152513 551
49 3300027614 Ga0209970_1004198 Ga0209970_10041982 551
50 3300027617 Ga0210002_1001764 Ga0210002_10017642 551
51 3300027682 Ga0209971_1000338 Ga0209971_10003384 551
52 3300027717 Ga0209998_10000168 Ga0209998_1000016814 551
53 3300027876 Ga0209974_10000232 Ga0209974_1000023215 551
54 3300028380 Ga0268265_10036588 Ga0268265_100365883 551
55 3300032002 Ga0307416_100008054 Ga0307416_1000080544 551
56 3300036401 Ga0373937_0176472 Ga0373937_0176472_11_1756 551
57 3300042156 Ga0439446_0003966 Ga0439446_0003966_1050_2777 551
58 3300042184 Ga0450908_001235 Ga0450908_001235_3197_4912 551
59 3300042436 Ga0439435_0001440 Ga0439435_0001440_2427_4154 551
60 3300042437 Ga0439444_0000712 Ga0439444_0000712_833_2560 551
61 3300049574 Ga0501038_0057253 Ga0501038_0057253_1263_2990 551
62 3300049574 Ga0501038_0084912 Ga0501038_0084912_208_1923 551
63 3300049578 Ga0501042_0012440 Ga0501042_0012440_3620_5347 551
64 3300049578 Ga0501042_0069408 Ga0501042_0069408_631_2346 551
65 3300049588 Ga0501072_0042443 Ga0501072_0042443_1757_3472 551
66 3300049741 Ga0501079_0053073 Ga0501079_0053073_1277_3004 551
67 3300049743 Ga0501081_0038230 Ga0501081_0038230_788_2515 551
68 3300049743 Ga0501081_0058539 Ga0501081_0058539_295_2010 551
69 3300049822 Ga0501035_0004664 Ga0501035_0004664_9806_11521 551
70 3300049824 Ga0501045_0013184 Ga0501045_0013184_1465_3183 551
71 3300050515 nmdc:mga0a205_34152_c1 nmdc:mga0a205_34152_c1_2375_4099 551
72 3300060353 Ga0501082_0011972 Ga0501082_0011972_1084_2811 551
73 3300021361 Ga0213872_10001188 Ga0213872_1000118817 552
74 3300021361 Ga0213872_10005024 Ga0213872_100050244 552
75 3300039447 Ga0436361_0320757 Ga0436361_0320757_15977_17704 552
76 3300039447 Ga0436361_0981128 Ga0436361_0981128_6003_7745 552
77 iso_pu_bacteria 2928115317 2928121058 552
78 3300003792 Ga0055540_1007215 Ga0055540_10072152 553
79 3300025303 Ga0209051_1000617 Ga0209051_100061712 553
80 3300031251 Ga0265327_10007655 Ga0265327_1000765510 553
81 3300048905 Ga0496102_0000108 Ga0496102_0000108_114324_116126 555
82 3300005327 Ga0070658_10000718 Ga0070658_1000071814 556
83 3300025909 Ga0207705_10000496 Ga0207705_1000049620 556
84 3300037418 Ga0395900_0029903 Ga0395900_0029903_1281_3050 556
85 3300037466 Ga0395898_0010651 Ga0395898_0010651_2667_4436 556
86 3300005331 Ga0070670_100016421 Ga0070670_1000164212 557
87 3300013306 Ga0163162_10066571 Ga0163162_100665712 557
88 3300015265 Ga0182005_1000327 Ga0182005_100032712 557
89 3300017792 Ga0163161_10032853 Ga0163161_100328532 557
90 3300028380 Ga0268265_10075236 Ga0268265_100752362 557
91 3300046454 Ga0495592_0000478 Ga0495592_0000478_23253_25136 557
92 3300046462 Ga0495651_0003307 Ga0495651_0003307_5230_7020 557
93 3300046462 Ga0495651_0011316 Ga0495651_0011316_3364_5217 557
94 3300046511 Ga0495608_0009586 Ga0495608_0009586_197_1987 557
95 3300046511 Ga0495608_0036646 Ga0495608_0036646_986_2839 557
96 3300046514 Ga0495618_0046149 Ga0495618_0046149_853_2706 557
97 3300046516 Ga0495628_0001152 Ga0495628_0001152_15842_17632 557
98 3300046516 Ga0495628_0012451 Ga0495628_0012451_3757_5610 557
99 3300046529 Ga0495652_0002248 Ga0495652_0002248_7367_9157 557
100 3300046675 Ga0495657_0058356 Ga0495657_0058356_507_2360 557
101 3300046678 Ga0495599_0003745 Ga0495599_0003745_1057_2910 557
102 3300046679 Ga0495623_0021500 Ga0495623_0021500_895_2685 557
103 3300046680 Ga0495646_0045402 Ga0495646_0045402_700_2553 557
104 3300046690 Ga0495624_0012122 Ga0495624_0012122_860_2713 557
105 3300046809 Ga0495600_0018481 Ga0495600_0018481_804_2657 557
106 3300049576 Ga0501040_0000024 Ga0501040_0000024_17711_19459 557
107 3300049578 Ga0501042_0000155 Ga0501042_0000155_12615_14363 557
108 3300049578 Ga0501042_0011818 Ga0501042_0011818_2403_4151 557
109 3300053077 Ga0495601_0040507 Ga0495601_0040507_806_2659 557
110 3300053119 Ga0500595_001467 Ga0500595_001467_1274_3127 557
111 3300053141 Ga0500574_001949 Ga0500574_001949_308_2161 557
112 iso_pu_bacteria 2751185846 2753567591 557
113 iso_pu_bacteria 2818991436 2819541426 557
114 3300049822 Ga0501035_0052004 Ga0501035_0052004_864_2696 558
115 3300031995 Ga0307409_100146506 Ga0307409_1001465061 559
116 3300048929 Ga0496126_0000798 Ga0496126_0000798_27205_29064 559
117 3300005437 Ga0070710_10008621 Ga0070710_100086213 560
118 3300005439 Ga0070711_100022777 Ga0070711_1000227773 560
119 3300015685 Ga0183369_1014 Ga0183369_101498 560
120 3300025905 Ga0207685_10012330 Ga0207685_100123302 560
121 3300025916 Ga0207663_10049545 Ga0207663_100495452 560
122 3300025939 Ga0207665_10023910 Ga0207665_100239103 560
123 3300035695 Ga0373927_0026871 Ga0373927_0026871_1341_3131 560
124 3300046463 Ga0495653_0049202 Ga0495653_0049202_344_2089 560
125 3300046475 Ga0495639_0017168 Ga0495639_0017168_334_2124 560
126 3300046642 Ga0495634_0035111 Ga0495634_0035111_200_1990 560
127 3300046663 Ga0495635_0031958 Ga0495635_0031958_1234_3024 560
128 3300046680 Ga0495646_0027180 Ga0495646_0027180_1208_2998 560
129 3300047319 Ga0495674_0013475 Ga0495674_0013475_4414_6204 560
130 3300047673 Ga0495593_0018092 Ga0495593_0018092_1229_3019 560
131 3300048088 Ga0495602_0023716 Ga0495602_0023716_3224_4969 560
132 iso_pu_bacteria 2721755763 2723877712 560
133 3300037312 Ga0395899_0006129 Ga0395899_0006129_1990_3741 561
134 3300037418 Ga0395900_0000375 Ga0395900_0000375_5579_7330 561
135 3300037466 Ga0395898_0000629 Ga0395898_0000629_57205_58956 561
136 3300037471 Ga0395905_0000361 Ga0395905_0000361_57188_58939 561
137 3300038443 Ga0395901_0000273 Ga0395901_0000273_57113_58864 561
138 3300046511 Ga0495608_0031362 Ga0495608_0031362_682_2430 561
139 3300046514 Ga0495618_0101257 Ga0495618_0101257_23_1771 561
140 3300046533 Ga0495640_0011200 Ga0495640_0011200_4877_6625 561
141 3300053085 Ga0495619_0013891 Ga0495619_0013891_776_2524 561
142 iso_pu_bacteria 8054563764 8054568903 561
143 3300009093 Ga0105240_10000336 Ga0105240_1000033655 562
144 3300009545 Ga0105237_10000690 Ga0105237_100006906 562
145 3300013104 Ga0157370_10013080 Ga0157370_100130804 562
146 3300015262 Ga0182007_10001127 Ga0182007_100011279 562
147 3300036401 Ga0373937_0093735 Ga0373937_0093735_272_2098 562
148 3300047317 Ga0495604_0053092 Ga0495604_0053092_516_2342 562
149 3300048905 Ga0496102_0000614 Ga0496102_0000614_24028_25812 562
150 3300048906 Ga0496103_0001533 Ga0496103_0001533_9177_10961 562
151 3300048919 Ga0496116_0008209 Ga0496116_0008209_1735_3519 562
152 3300048920 Ga0496117_0000987 Ga0496117_0000987_21850_23634 562
153 3300048921 Ga0496118_0000353 Ga0496118_0000353_52287_54071 562
154 3300048922 Ga0496119_0006659 Ga0496119_0006659_8786_10570 562
155 3300048923 Ga0496120_0000775 Ga0496120_0000775_43075_44859 562
156 3300048924 Ga0496121_0000536 Ga0496121_0000536_23778_25562 562
157 3300048925 Ga0496122_0008564 Ga0496122_0008564_1503_3287 562
158 3300048926 Ga0496123_0004184 Ga0496123_0004184_8767_10551 562
159 3300048928 Ga0496125_0013850 Ga0496125_0013850_5507_7291 562
160 3300025253 Ga0209677_100134 Ga0209677_10013448 563
161 3300025261 Ga0209233_1000162 Ga0209233_100016214 563
162 3300025913 Ga0207695_10000458 Ga0207695_1000045835 563
163 3300025914 Ga0207671_10001879 Ga0207671_100018793 563
164 iso_pu_bacteria 2582581308 2585277781 563
165 iso_pu_bacteria 2582581315 2585328991 563
166 iso_pu_bacteria 2585427527 2585533352 563
167 iso_pu_bacteria 2585427530 2585555779 563
168 iso_pu_bacteria 2615840626 2616310542 563
169 iso_pu_bacteria 2818991453 2819643156 563
170 iso_pu_bacteria 2855020534 2855023459 563
171 3300005347 Ga0070668_100013520 Ga0070668_1000135204 564
172 3300005439 Ga0070711_100025294 Ga0070711_1000252942 564
173 3300013105 Ga0157369_10008025 Ga0157369_1000802512 564
174 3300021327 Ga0214543_1018387 Ga0214543_10183874 564
175 3300025972 Ga0207668_10003441 Ga0207668_100034413 564
176 3300031548 Ga0307408_100056488 Ga0307408_1000564882 564
177 3300031911 Ga0307412_10049480 Ga0307412_100494801 564
178 3300035172 Ga0373955_0009631 Ga0373955_0009631_716_2542 564
179 3300046459 Ga0495629_0000205 Ga0495629_0000205_33786_35579 564
180 3300046471 Ga0495650_0000560 Ga0495650_0000560_17107_18900 564
181 3300046472 Ga0495580_0000419 Ga0495580_0000419_5635_7425 564
182 3300046472 Ga0495580_0000483 Ga0495580_0000483_14825_16615 564
183 3300046516 Ga0495628_0028451 Ga0495628_0028451_2133_4088 564
184 3300046526 Ga0495666_0005962 Ga0495666_0005962_1579_3534 564
185 3300046528 Ga0495642_0010605 Ga0495642_0010605_279_2072 564
186 3300046529 Ga0495652_0100886 Ga0495652_0100886_317_2110 564
187 3300046529 Ga0495652_0104751 Ga0495652_0104751_164_2119 564
188 3300046543 Ga0495645_0095546 Ga0495645_0095546_107_1900 564
189 3300046674 Ga0495588_0048000 Ga0495588_0048000_147_1940 564
190 3300046689 Ga0495613_0003691 Ga0495613_0003691_3375_5168 564
191 3300046690 Ga0495624_0000446 Ga0495624_0000446_27129_29084 564
192 3300046794 Ga0495589_0015734 Ga0495589_0015734_286_2079 564
193 3300047317 Ga0495604_0044970 Ga0495604_0044970_461_2416 564
194 3300047319 Ga0495674_0017544 Ga0495674_0017544_2647_4440 564
195 3300047319 Ga0495674_0070848 Ga0495674_0070848_608_2401 564
196 3300047322 Ga0495680_0039504 Ga0495680_0039504_160_1953 564
197 3300047444 Ga0495675_0033290 Ga0495675_0033290_304_2097 564
198 3300048904 Ga0496101_0033719 Ga0496101_0033719_1351_3144 564
199 3300048907 Ga0496104_0018248 Ga0496104_0018248_3500_5293 564
200 3300048917 Ga0496114_0031668 Ga0496114_0031668_379_2172 564
201 3300048918 Ga0496115_0047239 Ga0496115_0047239_1418_3211 564
202 3300048929 Ga0496126_0000196 Ga0496126_0000196_128242_130032 564
203 3300048929 Ga0496126_0007234 Ga0496126_0007234_785_2632 564
204 3300049581 Ga0501047_0001374 Ga0501047_0001374_19199_20977 564
205 iso_pu_bacteria 2513237087 2513593008 564
206 iso_pu_bacteria 2516143018 2516206559 564
207 iso_pu_bacteria 2582581866 2585398197 564
208 iso_pu_bacteria 2657244999 2657686574 564
209 iso_pu_bacteria 2690316117 2692314933 564
210 iso_pu_bacteria 2791355092 2792630942 564
211 iso_pu_bacteria 2791355094 2792643962 564
212 iso_pu_bacteria 2802429268 2804755431 564
213 iso_pu_bacteria 2838074704 2838080269 564
214 iso_pu_bacteria 2847417321 2847420011 564
215 iso_pu_bacteria 2848992105 2848994955 564
216 iso_pu_bacteria 2855872281 2855877004 564
217 iso_pu_bacteria 2896384573 2896390453 564
218 iso_pu_bacteria 2908739725 2908740713 564
219 iso_pu_bacteria 2920760137 2920762400 564
220 iso_pu_bacteria 2920822456 2920829121 564
221 iso_pu_bacteria 643692032 643827613 564
222 iso_pu_bacteria 8049293176 8049296967 564
223 3300003316 rootH1_10003373 rootH1_100033732 565
224 iso_pu_bacteria 2828305725 2828309320 566
225 iso_pu_bacteria 2775507049 2776914682 567
226 iso_pu_bacteria 2899803654 2899804132 567
227 3300031649 Ga0307514_10000330 Ga0307514_1000033058 568
228 3300049571 Ga0501034_0138439 Ga0501034_0138439_77_1894 568
229 3300001979 JGI24740J21852_10000046 JGI24740J21852_1000004612 570
230 3300003751 Ga0055538_1002229 Ga0055538_10022292 570
231 3300003756 Ga0055533_1000492 Ga0055533_100049211 570
232 3300003762 Ga0055542_1002740 Ga0055542_10027401 570
233 3300003841 Ga0055541_1000269 Ga0055541_10002699 570
234 3300014497 Ga0182008_10025332 Ga0182008_100253322 570
235 3300015261 Ga0182006_1018339 Ga0182006_10183392 570
236 3300025224 Ga0209784_100180 Ga0209784_1001804 570
237 3300025225 Ga0209566_100476 Ga0209566_10047619 570
238 3300025226 Ga0209674_100116 Ga0209674_10011664 570
239 3300025246 Ga0209646_1000027 Ga0209646_1000027136 570
240 3300025253 Ga0209677_101333 Ga0209677_1013339 570
241 3300025254 Ga0209148_1000019 Ga0209148_1000019230 570
242 3300025256 Ga0209759_1006060 Ga0209759_10060603 570
243 3300025932 Ga0207690_10001700 Ga0207690_100017009 570

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07167

PhaC_N

Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus

160

329

0.98

PF12551

PHBC_N

Poly-beta-hydroxybutyrate polymerase N terminal

81

123

0.97

PF00561

Abhydrolase_1

alpha/beta hydrolase fold

302

573

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
5xav-assembly1.cif.gz_B structure of phac from chromobacterium sp. usm2 0.9009 198 565
5xav-assembly1.cif.gz_A structure of phac from chromobacterium sp. usm2 0.8971 198 565
6k3c-assembly1.cif.gz_A crystal structure of class i pha synthase (phac) mutant from chromobacterium sp. usm2 bound to coenzyme a. 0.8884 198 563
5t6o-assembly1.cif.gz_A structure of the catalytic domain of the class i polyhydroxybutyrate synthase from cupriavidus necator 0.8715 198 562
5hz2-assembly1.cif.gz_A crystal structure of phac1 from ralstonia eutropha 0.8506 198 562
ID Description Score Start End Superfamily
3qzuA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.7958 233 343 3.40.50.1820
af_I1NDE0_64_255_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.7679 279 344 3.40.50.1820
af_O33185_49_361_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.7582 218 548 3.40.50.1820
af_O33185_49_361_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.7492 218 548 3.40.50.1820
af_A0A1P8AWG3_71_440_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.7469 218 506 3.40.50.1820
ID Description Score Start End GO Terms
AF-A0A1I5AME1-F1-model_v4 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 0.9968 218 327 GO:0016746
GO:0042619
AF-A0A6M5JIV8-F1-model_v4 Alpha/beta fold hydrolase 0.991 11 565 GO:0016746
GO:0016787
GO:0042619
AF-W7QG46-F1-model_v4 Poly-beta-hydroxybutyrate polymerase 0.9896 11 457 GO:0016746
GO:0042619
AF-A0A846V8P8-F1-model_v4 deleted 0.9893 11 564
AF-A0A315BE56-F1-model_v4 Poly-beta-hydroxybutyrate polymerase 0.9882 15 565 GO:0016746
GO:0042619

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pLDDT pTM Quality
88.26 0.86 High
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Predicted Structure (AlphaFold2)

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