F355651

General Info

Members Datasets Scaffolds Average Seq Length
243 198 486 309

Family's Representative Sequence

Representative Sequence 3300025913|Ga0207695_10139186|Ga0207695_101391861
Length 371
Sequence MLWLSQQRLCLRTLLGHEAEETHKPGPSLLRDPRMEPARWKRIDLPSSPTRVGLNRMEITMSTMKAVCIHSFGGPEVLKVESIERPTPQADEVLIKVHAASVNPVDYKIRSGGYPAVKKQQLPKVLGRDVSGTIEECGRAVQNMQEGDEVYAMLDGGPGGYAEYVAVKANLCAPKPKQLDYTAAAAVPLAALTAWQGLFDHGHLLAGQRVLIHGGAGGVGHFAIQFAKASGATVCTTVSAEDEAFVRSLGADEVVDYKSERFEQKVHDVDLVFDLVAGDTQERSWAVLKDGGTLISTLAKPSEARAREHHARAAHYMAHPDGTELKEIGTLIDSGKVKPHIDATYPLERAAEAQQRIEGQHTQGKVVLQVS

Samples

Sample ID Description Type Environment
1 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
6 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
7 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
8 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
11 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
14 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
15 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
18 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
19 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
20 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
21 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
22 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
23 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
24 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
25 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
26 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
27 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
28 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
29 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
30 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
31 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
32 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
33 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
34 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
35 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
36 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
37 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
38 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
39 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
40 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
41 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
42 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
43 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
45 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
46 3300009979 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_126 metaG Metagenome Rhizosphere
47 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
48 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
49 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
50 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
51 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
52 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
53 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
54 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
55 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
56 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
57 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
58 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
59 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
71 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
73 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
74 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
75 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
76 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
77 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
78 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
79 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
80 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
81 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
82 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
83 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
84 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
85 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
86 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
87 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
88 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
89 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
90 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
91 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
92 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
93 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
94 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
95 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
96 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
97 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
98 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
99 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
100 3300042116 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126F_E14_082316_1792 Metagenome Rhizosphere
101 3300042129 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_070516_95 Metagenome Rhizosphere
102 3300042137 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913F_E14_072516_1519 Metagenome Rhizosphere
103 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
104 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
105 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
106 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
107 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
108 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
109 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
110 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
111 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
112 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
113 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
114 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
115 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
116 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
117 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
118 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
119 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
120 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
121 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
122 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
123 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
124 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
125 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
126 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
127 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
128 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
129 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
130 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
131 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
132 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
133 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
134 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
135 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
136 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
137 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
138 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
139 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
140 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
143 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
147 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
148 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
149 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
151 3300049853 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought Metagenome Rhizosphere
152 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
153 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
154 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
155 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
156 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
157 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
158 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
159 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
160 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
161 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
162 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
163 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
164 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
165 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
166 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
167 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
168 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
169 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
170 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
171 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
172 2508501123 Mesorhizobium sp. WSM3626 Isolate Nodule
173 2537561728 Pectobacterium wasabiae CFBP 3304 Isolate Rhizoplane
174 2599185302 Pseudomonas sp. NFACC43 Isolate Rhizoplane
175 2599185304 Pseudomonas sp. NFACC47-1 Isolate Rhizoplane
176 2599185309 Pseudomonas sp. NFACC49-2 Isolate Rhizoplane
177 2599185310 Pseudomonas sp. NFACC09-4 Isolate Rhizoplane
178 2599185312 Pseudomonas sp. NFACC32-1 Isolate Rhizoplane
179 2599185320 Pseudomonas sp. NFACC36 Isolate Rhizoplane
180 2738541276 Cellvibrio sp. YR554 Isolate Unclassified
181 2738541279 Flavobacterium sp. GV069 Isolate Unclassified
182 2738541285 Flavobacterium sp. GV030 Isolate Unclassified
183 2738543007 Flavobacterium sp. GV063 Isolate Unclassified
184 2738543031 Pleomorphomonas sp. CF100 Isolate Unclassified
185 2818991446 Variovorax sp. 1180 Isolate Unclassified
186 2842854478 Pseudomonas sp. R-71998 Isolate Unclassified
187 2857618242 Flavobacterium sp. R-74482 Isolate Unclassified
188 2871282230 Pectobacterium parmentieri SS90 Isolate Stem Tuber
189 2899924645 Variovorax sp. 369 Isolate Unclassified
190 2925326138 Paenibacillus hemerocallicola KCTC 33185 Isolate Unclassified
191 2928037797 Variovorax sp. 1126 Isolate Unclassified
192 2928044640 Variovorax sp. 1128 Isolate Unclassified
193 2928051484 Variovorax sp. 1133 Isolate Unclassified
194 2928064002 Variovorax sp. 1140 Isolate Rhizosphere
195 2929177148 Chitinophaga sp. R-72269 Hybrid assembly Isolate Unclassified
196 2946013367 Chitinophaga sp. W3I9 Isolate Rhizosphere
197 3002998708 Actinomadura barringtoniae GKU 128 Isolate Unclassified
198 8056143049 Pseudomonas alvandae SWRI17 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 88.89
Metatranscriptomes 0
Isolates 11.11

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.52
Nodule 0.41
Rhizoplane 7
Rhizosphere 67.49
Stem 0
Stem Tuber 0.41
Unclassified 4.53

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207695_10139186 3300025913 Bacteria 2377
2 rootH2_10033857 3300003320 Bacteria 4552
3 rootL2_10167669 3300003322 Bacteria 2224
4 rootL2_10198174 3300003322 Bacteria 9772
5 rootH1_10007952 3300003323 Bacteria 103524
6 rootH1_10098657 3300003323 Bacteria 5160
7 rootH1_10296936 3300003323 Unclassified 2679
8 Ga0055535_1000470 3300003761 Bacteria 36908
9 Ga0055542_1000073 3300003762 Bacteria 145255
10 Ga0055542_1002177 3300003762 Bacteria 7029
11 Ga0065715_10111232 3300005293 Bacteria 2583
12 Ga0070683_100018504 3300005329 Bacteria 6172
13 Ga0070683_100454196 3300005329 Bacteria 1223
14 Ga0070680_100007296 3300005336 Bacteria 8427
15 Ga0070674_100144547 3300005356 Bacteria 1789
16 Ga0070709_10176487 3300005434 Bacteria 1497
17 Ga0070714_100175964 3300005435 Bacteria 1944
18 Ga0070705_100061255 3300005440 Bacteria 2236
19 Ga0070694_100043631 3300005444 Bacteria 2999
20 Ga0070694_100196028 3300005444 Bacteria 1503
21 Ga0070694_100244479 3300005444 Bacteria 1355
22 Ga0070708_100151841 3300005445 Bacteria 2154
23 Ga0070681_10325033 3300005458 Bacteria 1448
24 Ga0070706_100015886 3300005467 Bacteria 6950
25 Ga0070707_100376046 3300005468 Bacteria 1380
26 Ga0070699_100063400 3300005518 Bacteria 3205
27 Ga0070679_100055807 3300005530 Bacteria 3934
28 Ga0070684_100033200 3300005535 Bacteria 4404
29 Ga0070684_100208794 3300005535 Bacteria 1780
30 Ga0070697_100398135 3300005536 Bacteria 1194
31 Ga0070686_100042337 3300005544 Bacteria 2852
32 Ga0070695_100039768 3300005545 Bacteria 2974
33 Ga0070696_100047135 3300005546 Bacteria 2990
34 Ga0070665_100033926 3300005548 Bacteria 5134
35 Ga0070704_100002351 3300005549 Bacteria 10610
36 Ga0068855_100057004 3300005563 Bacteria 4581
37 Ga0081455_10003142 3300005937 Bacteria 19205
38 Ga0081455_10052879 3300005937 Bacteria 3473
39 Ga0081538_10008657 3300005981 Bacteria 8603
40 Ga0081540_1000115 3300005983 Bacteria 84188
41 Ga0075368_10000003 3300006042 Bacteria 56143
42 Ga0075363_100011395 3300006048 Unclassified 4255
43 Ga0070716_100019966 3300006173 Bacteria 3511
44 Ga0070712_100072862 3300006175 Bacteria 2462
45 Ga0075367_10000031 3300006178 Bacteria 30935
46 Ga0075366_10000026 3300006195 Bacteria 51752
47 Ga0075433_10082638 3300006852 Bacteria 2833
48 Ga0075434_100162175 3300006871 Bacteria 2255
49 Ga0075436_100070789 3300006914 Bacteria 2411
50 Ga0075435_100206077 3300007076 Bacteria 1667
51 Ga0105240_10025953 3300009093 Bacteria 7695
52 Ga0105240_10029194 3300009093 Bacteria 7191
53 Ga0105240_10148105 3300009093 Bacteria 2799
54 Ga0114129_10911043 3300009147 Unclassified 1113
55 Ga0105237_10028855 3300009545 Bacteria 5646
56 Ga0105237_10062212 3300009545 Bacteria 3732
57 Ga0105237_10257620 3300009545 Bacteria 1747
58 Ga0105238_10298154 3300009551 Bacteria 1595
59 Ga0105032_100001 3300009979 Bacteria 472394
60 Ga0105239_10027408 3300010375 Bacteria 6271
61 Ga0105239_10274599 3300010375 Bacteria 1896
62 Ga0157371_10037266 3300013102 Bacteria 3481
63 Ga0157371_10043052 3300013102 Bacteria 3217
64 Ga0157369_10100905 3300013105 Unclassified 3076
65 Ga0163162_10000564 3300013306 Bacteria 34206
66 Ga0157380_10007000 3300014326 Bacteria 7986
67 Ga0157379_10006931 3300014968 Bacteria 9798
68 Ga0182006_1010250 3300015261 Bacteria 4174
69 Ga0163161_10000012 3300017792 Bacteria 264639
70 Ga0209672_100195 3300025228 Bacteria 48946
71 Ga0209147_101700 3300025229 Bacteria 7152
72 Ga0209258_100069 3300025242 Bacteria 280496
73 Ga0209148_1000076 3300025254 Bacteria 301449
74 Ga0209148_1000146 3300025254 Bacteria 160734
75 Ga0207684_10149496 3300025910 Bacteria 2009
76 Ga0207707_10155856 3300025912 Bacteria 1997
77 Ga0207695_10029557 3300025913 Bacteria 6051
78 Ga0207671_10043730 3300025914 Bacteria 3312
79 Ga0207693_10022598 3300025915 Bacteria 4996
80 Ga0207660_10040085 3300025917 Bacteria 3277
81 Ga0207646_10238591 3300025922 Bacteria 1642
82 Ga0207700_10022241 3300025928 Bacteria 4347
83 Ga0207669_10091275 3300025937 Bacteria 1984
84 Ga0207665_10097625 3300025939 Bacteria 2046
85 Ga0207667_10036646 3300025949 Bacteria 5253
86 Ga0207708_10374131 3300026075 Bacteria 1173
87 Ga0209813_10000004 3300027866 Bacteria 139340
88 Ga0268266_10002557 3300028379 Bacteria 19304
89 Ga0265334_10000022 3300028573 Bacteria 127132
90 Ga0307517_10000803 3300028786 Bacteria 53852
91 Ga0307515_10000300 3300028794 Bacteria 122040
92 Ga0307515_10025144 3300028794 Bacteria 10323
93 Ga0307515_10060279 3300028794 Bacteria 5416
94 Ga0265320_10038485 3300031240 Unclassified 2399
95 Ga0265327_10000025 3300031251 Bacteria 380054
96 Ga0265327_10004747 3300031251 Bacteria 11850
97 Ga0307513_10132939 3300031456 Bacteria 2430
98 Ga0307408_100000003 3300031548 Bacteria 618438
99 Ga0307408_100000066 3300031548 Bacteria 121679
100 Ga0307408_100000112 3300031548 Bacteria 89783
101 Ga0265314_10104203 3300031711 Unclassified 1817
102 Ga0316578_10135605 3300031728 Bacteria 1482
103 Ga0307516_10071131 3300031730 Bacteria 3340
104 Ga0307405_10011847 3300031731 Bacteria 4590
105 Ga0307410_10000011 3300031852 Bacteria 80087
106 Ga0307406_10009213 3300031901 Bacteria 5530
107 Ga0307412_10000747 3300031911 Bacteria 18841
108 Ga0307412_10001082 3300031911 Bacteria 15573
109 Ga0307412_10040971 3300031911 Unclassified 2999
110 Ga0307409_100000044 3300031995 Bacteria 44244
111 Ga0307409_100219985 3300031995 Bacteria 1714
112 Ga0307416_100000137 3300032002 Bacteria 42935
113 Ga0307416_100398084 3300032002 Bacteria 1414
114 Ga0307414_10069472 3300032004 Bacteria 2532
115 Ga0307411_10007411 3300032005 Bacteria 5588
116 Ga0373934_0081255 3300035086 Bacteria 1302
117 Ga0395900_0331847 3300037418 Bacteria 1499
118 Ga0395898_0099138 3300037466 Bacteria 2798
119 Ga0436360_0707874 3300039438 Bacteria 2231
120 Ga0436361_1111155 3300039447 Bacteria 2499
121 Ga0436363_1245000 3300039450 Bacteria 3867
122 Ga0439447_006453 3300041407 Bacteria 3806
123 Ga0439447_010857 3300041407 Bacteria 2685
124 Ga0439466_0003412 3300041411 Bacteria 6165
125 Ga0451837_1347126 3300041494 Bacteria 1326
126 Ga0439452_000097 3300042010 Bacteria 74034
127 Ga0450912_000130 3300042116 Bacteria 2819
128 Ga0450891_000308 3300042129 Bacteria 5006
129 Ga0450902_000063 3300042137 Bacteria 10429
130 Ga0451577_0005197 3300042876 Bacteria 13392
131 Ga0451577_0190820 3300042876 Bacteria 1848
132 Ga0451577_0287950 3300042876 Bacteria 1489
133 Ga0466972_0018986 3300044658 Bacteria 3437
134 Ga0453683_0000004 3300044673 Bacteria 759456
135 Ga0453683_0000198 3300044673 Bacteria 81903
136 Ga0453683_0003449 3300044673 Bacteria 11652
137 Ga0466966_0003217 3300044684 Bacteria 10766
138 Ga0466966_0062250 3300044684 Unclassified 2353
139 Ga0466961_0003589 3300044693 Bacteria 9680
140 Ga0466964_0075327 3300044706 Bacteria 1436
141 Ga0453684_0019373 3300044712 Bacteria 10363
142 Ga0453684_0029510 3300044712 Bacteria 7784
143 Ga0453684_0119798 3300044712 Bacteria 3180
144 Ga0466971_0009658 3300044719 Bacteria 4209
145 Ga0466957_0001708 3300044842 Bacteria 11552
146 Ga0466959_0005736 3300045049 Bacteria 8541
147 Ga0466959_0020474 3300045049 Bacteria 4875
148 Ga0466959_0120292 3300045049 Bacteria 1868
149 Ga0451576_0000005 3300045051 Bacteria 1294643
150 Ga0451576_0129402 3300045051 Bacteria 2631
151 Ga0495592_0121547 3300046454 Bacteria 1836
152 Ga0495582_0289617 3300046473 Unclassified 941
153 Ga0495664_0043032 3300046477 Bacteria 2676
154 Ga0495594_0000004 3300046499 Bacteria 195881
155 Ga0495630_0012998 3300046517 Bacteria 6048
156 Ga0495652_0000066 3300046529 Bacteria 109895
157 Ga0495665_0104690 3300046531 Bacteria 1485
158 Ga0495645_0089235 3300046543 Bacteria 2205
159 Ga0495622_0000016 3300046557 Bacteria 177089
160 Ga0495633_0118713 3300046558 Bacteria 1225
161 Ga0495625_0000252 3300046660 Bacteria 83831
162 Ga0495625_0003696 3300046660 Bacteria 14966
163 Ga0495625_0028333 3300046660 Bacteria 4202
164 Ga0495613_0083416 3300046689 Unclassified 2321
165 Ga0495613_0200503 3300046689 Bacteria 1407
166 Ga0495624_0095919 3300046690 Bacteria 1827
167 Ga0495674_0056892 3300047319 Bacteria 3424
168 Ga0495684_0016205 3300047471 Bacteria 5739
169 Ga0495686_0007727 3300047472 Bacteria 8016
170 Ga0496104_0015719 3300048907 Bacteria 6865
171 Ga0496105_0029336 3300048908 Bacteria 4503
172 Ga0496105_0152775 3300048908 Bacteria 1897
173 Ga0496108_0057066 3300048911 Bacteria 3281
174 Ga0496109_0031717 3300048912 Bacteria 4745
175 Ga0496110_0108383 3300048913 Bacteria 2493
176 Ga0496110_0164929 3300048913 Bacteria 2009
177 Ga0496113_0147395 3300048916 Bacteria 1855
178 Ga0496114_0310489 3300048917 Bacteria 1393
179 Ga0496115_0005483 3300048918 Bacteria 9232
180 Ga0496121_0059404 3300048924 Bacteria 3153
181 Ga0496124_0003569 3300048927 Bacteria 18917
182 Ga0496124_0059362 3300048927 Bacteria 3214
183 Ga0501032_0000585 3300049569 Bacteria 29325
184 Ga0501034_0193565 3300049571 Bacteria 1995
185 Ga0501036_0072687 3300049572 Bacteria 2907
186 Ga0501043_0019574 3300049579 Bacteria 5313
187 Ga0501046_0007621 3300049580 Bacteria 9494
188 Ga0501047_0160428 3300049581 Bacteria 2120
189 Ga0501217_003836 3300049661 Bacteria 3059
190 Ga0501227_020063 3300049665 Bacteria 1529
191 Ga0501249_000011 3300049679 Bacteria 168084
192 Ga0501035_0001654 3300049822 Bacteria 22526
193 Ga0501035_0102034 3300049822 Bacteria 2517
194 Ga0501044_0002160 3300049823 Bacteria 22548
195 Ga0501226_001306 3300049853 Bacteria 3216
196 nmdc:mga03n38_580_c1 3300050490 Bacteria 9287
197 nmdc:mga0k408_26_c4 3300050493 Bacteria 51744
198 nmdc:mga06z11_6_c1 3300050494 Bacteria 124054
199 nmdc:mga04h51_4_c1 3300050495 Bacteria 139342
200 nmdc:mga07m45_4665_c1 3300050496 Bacteria 6728
201 nmdc:mga05p37_627379_c1 3300050507 Bacteria 1208
202 nmdc:mga0n895_510682_c1 3300050512 Bacteria 1210
203 nmdc:mga0rr50_108039_c1 3300050513 Bacteria 2197
204 nmdc:mga08x19_143262_c1 3300050514 Bacteria 1615
205 nmdc:mga0a205_129514_c1 3300050515 Bacteria 2424
206 nmdc:mga0a205_295221_c1 3300050515 Bacteria 1494
207 nmdc:mga0sz30_76857_c1 3300050516 Bacteria 1442
208 Ga0500578_0000012 3300053086 Bacteria 188658
209 Ga0500644_0012276 3300053088 Bacteria 2364
210 Ga0500651_0185182 3300053093 Bacteria 1235
211 Ga0500560_000059 3300053107 Bacteria 10296
212 Ga0500658_0000009 3300053134 Bacteria 270303
213 Ga0500604_0016324 3300053151 Bacteria 2044
214 Ga0500624_002981 3300053157 Unclassified 2237
215 Ga0500633_0000089 3300053160 Bacteria 12930
216 Ga0500634_0096629 3300053161 Bacteria 1487
217 2509117821 2508501123 Bacteria 6283661
218 2538425594 2537561728 Bacteria 5149301
219 2599944980 2599185302 Bacteria 5954930
220 2599955291 2599185304 Bacteria 5951361
221 2599984023 2599185309 Bacteria 5969593
222 2599990256 2599185310 Bacteria 6014457
223 2600001804 2599185312 Bacteria 5912071
224 2600048790 2599185320 Bacteria 5963263
225 2738713572 2738541276 Bacteria 4690596
226 2738732301 2738541279 Bacteria 6149495
227 2738764866 2738541285 Bacteria 6150075
228 2739213881 2738543007 Bacteria 6149845
229 2739351611 2738543031 Bacteria 5769731
230 2819598398 2818991446 Bacteria 7757362
231 2842857817 2842854478 Bacteria 6143501
232 2857622705 2857618242 Bacteria 5635925
233 2871286001 2871282230 Bacteria 4917173
234 2899926182 2899924645 Bacteria 7487985
235 2925332883 2925326138 Bacteria 9652120
236 2928044111 2928037797 Bacteria 7273642
237 2928050950 2928044640 Bacteria 7271509
238 2928057210 2928051484 Bacteria 7773759
239 2928069274 2928064002 Bacteria 7419480
240 2929183070 2929177148 Bacteria 7883697
241 2946015116 2946013367 Bacteria 7766675
242 3002999962 3002998708 Bacteria 11715108
243 8056146368 8056143049 Bacteria 6307666
244 Ga0207695_10139186
245 rootH2_10033857
246 rootL2_10167669
247 rootL2_10198174
248 rootH1_10007952
249 rootH1_10098657
250 rootH1_10296936
251 Ga0055535_1000470
252 Ga0055542_1000073
253 Ga0055542_1002177
254 Ga0065715_10111232
255 Ga0070683_100018504
256 Ga0070683_100454196
257 Ga0070680_100007296
258 Ga0070674_100144547
259 Ga0070709_10176487
260 Ga0070714_100175964
261 Ga0070705_100061255
262 Ga0070694_100043631
263 Ga0070694_100196028
264 Ga0070694_100244479
265 Ga0070708_100151841
266 Ga0070681_10325033
267 Ga0070706_100015886
268 Ga0070707_100376046
269 Ga0070699_100063400
270 Ga0070679_100055807
271 Ga0070684_100033200
272 Ga0070684_100208794
273 Ga0070697_100398135
274 Ga0070686_100042337
275 Ga0070695_100039768
276 Ga0070696_100047135
277 Ga0070665_100033926
278 Ga0070704_100002351
279 Ga0068855_100057004
280 Ga0081455_10003142
281 Ga0081455_10052879
282 Ga0081538_10008657
283 Ga0081540_1000115
284 Ga0075368_10000003
285 Ga0075363_100011395
286 Ga0070716_100019966
287 Ga0070712_100072862
288 Ga0075367_10000031
289 Ga0075366_10000026
290 Ga0075433_10082638
291 Ga0075434_100162175
292 Ga0075436_100070789
293 Ga0075435_100206077
294 Ga0105240_10025953
295 Ga0105240_10029194
296 Ga0105240_10148105
297 Ga0114129_10911043
298 Ga0105237_10028855
299 Ga0105237_10062212
300 Ga0105237_10257620
301 Ga0105238_10298154
302 Ga0105032_100001
303 Ga0105239_10027408
304 Ga0105239_10274599
305 Ga0157371_10037266
306 Ga0157371_10043052
307 Ga0157369_10100905
308 Ga0163162_10000564
309 Ga0157380_10007000
310 Ga0157379_10006931
311 Ga0182006_1010250
312 Ga0163161_10000012
313 Ga0209672_100195
314 Ga0209147_101700
315 Ga0209258_100069
316 Ga0209148_1000076
317 Ga0209148_1000146
318 Ga0207684_10149496
319 Ga0207707_10155856
320 Ga0207695_10029557
321 Ga0207671_10043730
322 Ga0207693_10022598
323 Ga0207660_10040085
324 Ga0207646_10238591
325 Ga0207700_10022241
326 Ga0207669_10091275
327 Ga0207665_10097625
328 Ga0207667_10036646
329 Ga0207708_10374131
330 Ga0209813_10000004
331 Ga0268266_10002557
332 Ga0265334_10000022
333 Ga0307517_10000803
334 Ga0307515_10000300
335 Ga0307515_10025144
336 Ga0307515_10060279
337 Ga0265320_10038485
338 Ga0265327_10000025
339 Ga0265327_10004747
340 Ga0307513_10132939
341 Ga0307408_100000003
342 Ga0307408_100000066
343 Ga0307408_100000112
344 Ga0265314_10104203
345 Ga0316578_10135605
346 Ga0307516_10071131
347 Ga0307405_10011847
348 Ga0307410_10000011
349 Ga0307406_10009213
350 Ga0307412_10000747
351 Ga0307412_10001082
352 Ga0307412_10040971
353 Ga0307409_100000044
354 Ga0307409_100219985
355 Ga0307416_100000137
356 Ga0307416_100398084
357 Ga0307414_10069472
358 Ga0307411_10007411
359 Ga0373934_0081255
360 Ga0395900_0331847
361 Ga0395898_0099138
362 Ga0436360_0707874
363 Ga0436361_1111155
364 Ga0436363_1245000
365 Ga0439447_006453
366 Ga0439447_010857
367 Ga0439466_0003412
368 Ga0451837_1347126
369 Ga0439452_000097
370 Ga0450912_000130
371 Ga0450891_000308
372 Ga0450902_000063
373 Ga0451577_0005197
374 Ga0451577_0190820
375 Ga0451577_0287950
376 Ga0466972_0018986
377 Ga0453683_0000004
378 Ga0453683_0000198
379 Ga0453683_0003449
380 Ga0466966_0003217
381 Ga0466966_0062250
382 Ga0466961_0003589
383 Ga0466964_0075327
384 Ga0453684_0019373
385 Ga0453684_0029510
386 Ga0453684_0119798
387 Ga0466971_0009658
388 Ga0466957_0001708
389 Ga0466959_0005736
390 Ga0466959_0020474
391 Ga0466959_0120292
392 Ga0451576_0000005
393 Ga0451576_0129402
394 Ga0495592_0121547
395 Ga0495582_0289617
396 Ga0495664_0043032
397 Ga0495594_0000004
398 Ga0495630_0012998
399 Ga0495652_0000066
400 Ga0495665_0104690
401 Ga0495645_0089235
402 Ga0495622_0000016
403 Ga0495633_0118713
404 Ga0495625_0000252
405 Ga0495625_0003696
406 Ga0495625_0028333
407 Ga0495613_0083416
408 Ga0495613_0200503
409 Ga0495624_0095919
410 Ga0495674_0056892
411 Ga0495684_0016205
412 Ga0495686_0007727
413 Ga0496104_0015719
414 Ga0496105_0029336
415 Ga0496105_0152775
416 Ga0496108_0057066
417 Ga0496109_0031717
418 Ga0496110_0108383
419 Ga0496110_0164929
420 Ga0496113_0147395
421 Ga0496114_0310489
422 Ga0496115_0005483
423 Ga0496121_0059404
424 Ga0496124_0003569
425 Ga0496124_0059362
426 Ga0501032_0000585
427 Ga0501034_0193565
428 Ga0501036_0072687
429 Ga0501043_0019574
430 Ga0501046_0007621
431 Ga0501047_0160428
432 Ga0501217_003836
433 Ga0501227_020063
434 Ga0501249_000011
435 Ga0501035_0001654
436 Ga0501035_0102034
437 Ga0501044_0002160
438 Ga0501226_001306
439 nmdc:mga03n38_580_c1
440 nmdc:mga0k408_26_c4
441 nmdc:mga06z11_6_c1
442 nmdc:mga04h51_4_c1
443 nmdc:mga07m45_4665_c1
444 nmdc:mga05p37_627379_c1
445 nmdc:mga0n895_510682_c1
446 nmdc:mga0rr50_108039_c1
447 nmdc:mga08x19_143262_c1
448 nmdc:mga0a205_129514_c1
449 nmdc:mga0a205_295221_c1
450 nmdc:mga0sz30_76857_c1
451 Ga0500578_0000012
452 Ga0500644_0012276
453 Ga0500651_0185182
454 Ga0500560_000059
455 Ga0500658_0000009
456 Ga0500604_0016324
457 Ga0500624_002981
458 Ga0500633_0000089
459 Ga0500634_0096629
460 2509117821
461 2538425594
462 2599944980
463 2599955291
464 2599984023
465 2599990256
466 2600001804
467 2600048790
468 2738713572
469 2738732301
470 2738764866
471 2739213881
472 2739351611
473 2819598398
474 2842857817
475 2857622705
476 2871286001
477 2899926182
478 2925332883
479 2928044111
480 2928050950
481 2928057210
482 2928069274
483 2929183070
484 2946015116
485 3002999962
486 8056146368

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08240

ADH_N

Alcohol dehydrogenase GroES-like domain

89

177

0.91

PF00107

ADH_zinc_N

Zinc-binding dehydrogenase

218

307

0.9

PF13602

ADH_zinc_N_2

Zinc-binding dehydrogenase

249

368

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
5a3j-assembly8.cif.gz_H crystal structure of the chloroplastic gamma-ketol reductase from arabidopsis thaliana bound to 13-oxo-9(z),11(e),15(z)- octadecatrienoic acid. 0.9341 1 303
5a3j-assembly8.cif.gz_H crystal structure of the chloroplastic gamma-ketol reductase from arabidopsis thaliana bound to 13-oxo-9(z),11(e),15(z)- octadecatrienoic acid. 0.9222 1 303
2eih-assembly1.cif.gz_A crystal structure of nad-dependent alcohol dehydrogenase 0.917 1 305
4j6f-assembly1.cif.gz_B crystal structure of putative alcohol dehydrogenase from sinorhizobium meliloti 1021, nysgrc-target 012230 0.9151 1 305
3tqh-assembly1.cif.gz_A structure of the quinone oxidoreductase from coxiella burnetii 0.9149 1 305
ID Description Score Start End Superfamily
af_A0A0P0W924_2_174_3.90.180.10 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.9665 15 136 3.90.180.10
af_Q3UNZ8_26_154_3.90.180.10 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.9639 2 132 3.90.180.10
af_A0A0P0W8W7_12_109_3.90.180.10 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.9595 18 114 3.90.180.10
af_B0BNC9_25_138_3.90.180.10 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.9544 2 118 3.90.180.10
af_Q9LK96_31_155_3.90.180.10 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.948 2 122 3.90.180.10
ID Description Score Start End GO Terms
AF-A0A0L8MXM1-F1-model_v4 deleted 0.9805 1 107
AF-A0A1Z4T6R5-F1-model_v4 deleted 0.9716 1 161
AF-A0A0L8MXM1-F1-model_v4 deleted 0.9713 1 107
AF-A0A6G8NSM8-F1-model_v4 L-threonine 3-dehydrogenase (EC 1.1.1.103) 0.9683 2 303 GO:0008270
GO:0008743
AF-A0A1S9XML4-F1-model_v4 deleted 0.9676 1 303

Map