F356016

General Info

Members Datasets Scaffolds Average Seq Length
243 203 486 252

Family's Representative Sequence

Representative Sequence 3300050490|nmdc:mga03n38_26366_c1|nmdc:mga03n38_26366_c1_750_1646
Length 298
Sequence LQRLDFPEWHGGCNEKPAARLGEMCGSLIAVARPWEGTAGAGSNGEFTMQNALLIGLSRQMTLRREMEVVANNVANMNTTGFKGDTAIFEEYLMPGASADQFARPDRKLSYVLDRSTWHDMSQGQVQQTGNPLDVAIDGNSFMVVQTPRGERYTRNGALQINAAGQLVTSEGFQVLGDSGPIQFQREDKNVLIARDGLISVPEGTRGKLRLVKFGDAVRLTKDAGSTFAAPQGVQPQQVTPEERHVMQGSLERSNVRGVVEMTRMIEVTRNYTQVAAMLQNQGDMRKSAVEKLAEVPA

Samples

Sample ID Description Type Environment
1 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
2 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
5 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
6 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
9 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
10 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
11 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
12 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
13 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
14 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
15 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
16 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
17 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
18 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
19 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
20 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
21 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
22 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
23 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
24 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
25 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
26 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
27 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
28 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
29 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
30 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
31 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
32 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
33 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
34 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300027512 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
46 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
47 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
48 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
49 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
50 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
51 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
52 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
53 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
54 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
55 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
56 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
57 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
58 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
59 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
60 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
61 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
62 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
63 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
64 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
65 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
66 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
67 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
68 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
69 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
70 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
71 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
72 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
73 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
74 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
75 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
76 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
77 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
78 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
79 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
80 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
81 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
82 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
83 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
84 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
85 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
86 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
87 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
88 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
89 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
90 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
91 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
92 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
93 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
94 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
95 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
96 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
97 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
98 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
99 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
100 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
101 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
102 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
103 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
104 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
105 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
106 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
107 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
108 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
109 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
110 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
111 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
112 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
113 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
114 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
115 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
116 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
117 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
118 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
119 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
120 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
121 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
122 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
123 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
124 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
125 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
126 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
127 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
128 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
129 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
130 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
131 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
134 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
140 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
141 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
142 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
143 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
144 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
145 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
146 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
147 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
148 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
149 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
150 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
151 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
152 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
153 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
154 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
155 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
156 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
157 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
158 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
159 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
160 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
161 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
162 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
163 3300053089 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 endosphere Metagenome Endosphere
164 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
165 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
166 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
167 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
168 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
169 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
170 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
171 3300053116 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 endosphere Metagenome Endosphere
172 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
173 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
174 3300053120 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere Metagenome Endosphere
175 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
176 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
177 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
178 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
179 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
180 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
181 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
182 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
183 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
184 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
185 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
186 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
187 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
188 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere
189 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
190 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
191 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
192 2511231221 Azospirillum lipoferum 4B Isolate Rhizosphere
193 2522572158 Azospirillum halopraeferens DSM 3675 Isolate Unclassified
194 2602042107 Bradyrhizobium sp. NFR13 Isolate Rhizoplane
195 2643221614 Phenylobacterium sp. Root77 Isolate Unclassified
196 2643221661 Phenylobacterium sp. Root1277 Isolate Unclassified
197 2643221666 Phenylobacterium sp. Root1290 Isolate Unclassified
198 2857524615 Tardiphaga sp. R-73074 Isolate Unclassified
199 2893066018 Tardiphaga sp. P9-11 Isolate Unclassified
200 2897803580 Azospirillum doebereinerae GSF71 Isolate Unclassified
201 2919073203 Tardiphaga robiniae 1155 Isolate Unclassified
202 2941485952 Brevundimonas faecalis 2814 Isolate Rhizosphere
203 8054002106 Azospirillum lipoferum 59b Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 95.06
Metatranscriptomes 0
Isolates 4.94

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 27.16
Nodule 0
Rhizoplane 2.06
Rhizosphere 59.67
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 nmdc:mga03n38_26366_c1 3300050490 Bacteria 2399
2 Ga0065165_1028099 3300005262 Bacteria 1822
3 Ga0065165_1036419 3300005262 Bacteria 1501
4 Ga0070680_100269689 3300005336 Bacteria 1441
5 Ga0070689_100194693 3300005340 Bacteria 1652
6 Ga0070671_100334978 3300005355 Bacteria 1290
7 Ga0070667_100482375 3300005367 Bacteria 1135
8 Ga0070714_100344712 3300005435 Bacteria 1398
9 Ga0070711_100555927 3300005439 Bacteria 953
10 Ga0070681_10084942 3300005458 Bacteria 3118
11 Ga0070679_100496981 3300005530 Bacteria 1164
12 Ga0068855_100467593 3300005563 Bacteria 1374
13 Ga0081538_10063421 3300005981 Bacteria 2098
14 Ga0081540_1008573 3300005983 Bacteria 7128
15 Ga0075368_10026661 3300006042 Bacteria 2224
16 Ga0075368_10054967 3300006042 Bacteria 1587
17 Ga0075363_100031826 3300006048 Bacteria 2737
18 Ga0075364_10021245 3300006051 Bacteria 4089
19 Ga0075364_10042770 3300006051 Bacteria 2944
20 Ga0075364_10207965 3300006051 Bacteria 1327
21 Ga0070712_100335761 3300006175 Bacteria 1233
22 Ga0075362_10000572 3300006177 Bacteria 10752
23 Ga0075362_10167958 3300006177 Bacteria 1059
24 Ga0075362_10216618 3300006177 Bacteria 935
25 Ga0075367_10098789 3300006178 Bacteria 1783
26 Ga0075367_10195750 3300006178 Bacteria 1262
27 Ga0075369_10115255 3300006186 Bacteria 1213
28 Ga0075370_10039124 3300006353 Bacteria 2671
29 Ga0075370_10145333 3300006353 Bacteria 1388
30 Ga0075428_100072971 3300006844 Bacteria 3747
31 Ga0075428_100221531 3300006844 Bacteria 2043
32 Ga0075434_100646776 3300006871 Bacteria 1076
33 Ga0075429_100648626 3300006880 Bacteria 925
34 Ga0075436_100255350 3300006914 Bacteria 1249
35 Ga0099795_10049359 3300007788 Bacteria 1527
36 Ga0111539_10252568 3300009094 Bacteria 2053
37 Ga0114129_10007176 3300009147 Bacteria 15863
38 Ga0114129_10061027 3300009147 Bacteria 5270
39 Ga0114129_10103201 3300009147 Bacteria 3942
40 Ga0105243_10627721 3300009148 Bacteria 1038
41 Ga0099796_10000565 3300010159 Bacteria 6368
42 Ga0163161_10067805 3300017792 Bacteria 2606
43 Ga0209676_1009658 3300025292 Bacteria 4134
44 Ga0209564_1001072 3300025295 Bacteria 32918
45 Ga0207692_10035464 3300025898 Bacteria 2424
46 Ga0207688_10124041 3300025901 Bacteria 1509
47 Ga0207693_10129060 3300025915 Bacteria 1987
48 Ga0207652_10207238 3300025921 Bacteria 1765
49 Ga0207664_10136176 3300025929 Bacteria 2072
50 Ga0207644_10519119 3300025931 Bacteria 984
51 Ga0207665_10294662 3300025939 Bacteria 1211
52 Ga0207658_10564465 3300025986 Bacteria 1020
53 Ga0207678_10009341 3300026067 Bacteria 8632
54 Ga0207698_10707164 3300026142 Bacteria 1003
55 Ga0209179_1007067 3300027512 Bacteria 1839
56 Ga0209813_10009848 3300027866 Bacteria 2458
57 Ga0307515_10066130 3300028794 Bacteria 5014
58 Ga0265338_10004359 3300028800 Bacteria 19150
59 Ga0265338_10069874 3300028800 Bacteria 3014
60 Ga0265325_10007434 3300031241 Bacteria 6556
61 Ga0265325_10023703 3300031241 Bacteria 3346
62 Ga0265340_10112497 3300031247 Bacteria 1257
63 Ga0265339_10000151 3300031249 Bacteria 57152
64 Ga0265339_10085683 3300031249 Bacteria 1658
65 Ga0265331_10206702 3300031250 Bacteria 884
66 Ga0265313_10000366 3300031595 Bacteria 49088
67 Ga0316579_10012107 3300031691 Bacteria 3684
68 Ga0265342_10008148 3300031712 Bacteria 7563
69 Ga0265342_10035697 3300031712 Bacteria 3041
70 Ga0307411_10425217 3300032005 Bacteria 1105
71 Ga0373936_0000545 3300035113 Bacteria 12908
72 Ga0373945_0011576 3300035116 Bacteria 2919
73 Ga0373953_0002477 3300035117 Bacteria 5584
74 Ga0373954_0006100 3300035118 Bacteria 5245
75 Ga0373957_0021211 3300035120 Bacteria 2304
76 Ga0373955_0000204 3300035172 Bacteria 24579
77 Ga0373924_0000051 3300035410 Bacteria 29889
78 Ga0373935_0000018 3300035692 Bacteria 68811
79 Ga0373935_0594556 3300035692 Bacteria 809
80 Ga0373927_0015173 3300035695 Bacteria 5094
81 Ga0373933_0006777 3300035724 Bacteria 6241
82 Ga0373947_0001428 3300035725 Bacteria 14707
83 Ga0373937_0000571 3300036401 Bacteria 32663
84 Ga0373925_0000018 3300037068 Bacteria 174213
85 Ga0373925_0074979 3300037068 Bacteria 2563
86 Ga0395899_0241865 3300037312 Bacteria 1242
87 Ga0395901_0143470 3300038443 Bacteria 2510
88 Ga0451841_0198275 3300041498 Bacteria 1000
89 Ga0466957_0059526 3300044842 Bacteria 2341
90 Ga0495592_0000001 3300046454 Bacteria 305819
91 Ga0495629_0029110 3300046459 Bacteria 3919
92 Ga0495638_0243496 3300046460 Bacteria 994
93 Ga0495651_0006530 3300046462 Bacteria 8908
94 Ga0495653_0000015 3300046463 Bacteria 213697
95 Ga0495662_0003120 3300046476 Bacteria 8358
96 Ga0495664_0000001 3300046477 Bacteria 757730
97 Ga0495607_0026508 3300046501 Bacteria 3595
98 Ga0495608_0000116 3300046511 Bacteria 56633
99 Ga0495610_0170084 3300046512 Bacteria 914
100 Ga0495616_0173863 3300046513 Bacteria 961
101 Ga0495618_0000021 3300046514 Bacteria 129750
102 Ga0495628_0000005 3300046516 Bacteria 420969
103 Ga0495630_0050999 3300046517 Bacteria 3096
104 Ga0495631_0046392 3300046518 Bacteria 1910
105 Ga0495637_0027137 3300046520 Bacteria 2565
106 Ga0495652_0000001 3300046529 Bacteria 1045081
107 Ga0495640_0000006 3300046533 Bacteria 285419
108 Ga0495587_0000012 3300046536 Bacteria 197088
109 Ga0495645_0000004 3300046543 Bacteria 532661
110 Ga0495667_0000001 3300046559 Bacteria 834831
111 Ga0495634_0000388 3300046642 Bacteria 42999
112 Ga0495625_0015783 3300046660 Bacteria 5963
113 Ga0495635_0000007 3300046663 Bacteria 278786
114 Ga0495661_0008497 3300046665 Bacteria 7101
115 Ga0495657_0000250 3300046675 Bacteria 48717
116 Ga0495599_0000002 3300046678 Bacteria 348168
117 Ga0495623_0000116 3300046679 Bacteria 48662
118 Ga0495646_0000049 3300046680 Bacteria 60856
119 Ga0495613_0107598 3300046689 Bacteria 2011
120 Ga0495624_0020888 3300046690 Bacteria 4350
121 Ga0495649_0000519 3300046694 Bacteria 32837
122 Ga0495600_0000013 3300046809 Bacteria 119404
123 Ga0495604_0000007 3300047317 Bacteria 412174
124 Ga0495674_0000001 3300047319 Bacteria 778665
125 Ga0495672_0040808 3300047320 Bacteria 2812
126 Ga0495680_0002740 3300047322 Bacteria 17787
127 Ga0495675_0000014 3300047444 Bacteria 137646
128 Ga0495684_0000219 3300047471 Bacteria 44380
129 Ga0495686_0078105 3300047472 Bacteria 2026
130 Ga0495686_0120728 3300047472 Bacteria 1562
131 Ga0495593_0000454 3300047673 Bacteria 23017
132 Ga0495602_0000004 3300048088 Bacteria 326932
133 Ga0496101_0313550 3300048904 Bacteria 1230
134 Ga0496106_0155225 3300048909 Bacteria 1807
135 Ga0496110_0281669 3300048913 Bacteria 1514
136 Ga0496114_0027085 3300048917 Bacteria 4696
137 Ga0496116_0004885 3300048919 Bacteria 12641
138 Ga0496117_0198518 3300048920 Bacteria 1135
139 Ga0496118_0321464 3300048921 Bacteria 839
140 Ga0496119_0110736 3300048922 Bacteria 1524
141 Ga0496120_0012459 3300048923 Bacteria 5788
142 Ga0496120_0071637 3300048923 Bacteria 1902
143 Ga0496121_0023431 3300048924 Bacteria 5944
144 Ga0496122_0014125 3300048925 Bacteria 7743
145 Ga0496122_0078034 3300048925 Bacteria 2322
146 Ga0496123_0116715 3300048926 Bacteria 1511
147 Ga0496124_0151191 3300048927 Bacteria 1821
148 Ga0496125_0000063 3300048928 Bacteria 250260
149 Ga0496125_0000858 3300048928 Bacteria 48749
150 Ga0496125_0002590 3300048928 Bacteria 23229
151 Ga0496125_0036860 3300048928 Bacteria 4260
152 Ga0496126_0108561 3300048929 Bacteria 2419
153 Ga0495678_042775 3300049459 Bacteria 1804
154 Ga0501031_0208680 3300049568 Bacteria 1273
155 Ga0501034_0310863 3300049571 Bacteria 1510
156 Ga0501036_0069292 3300049572 Bacteria 2984
157 Ga0501038_0051116 3300049574 Bacteria 3569
158 Ga0501039_0023998 3300049575 Bacteria 4684
159 Ga0501040_0148940 3300049576 Bacteria 1650
160 Ga0501041_0022186 3300049577 Bacteria 3801
161 Ga0501048_0064166 3300049582 Bacteria 2598
162 Ga0501071_0085105 3300049587 Bacteria 2318
163 Ga0501073_0124105 3300049589 Bacteria 1790
164 Ga0501073_0210561 3300049589 Bacteria 1343
165 Ga0501075_0068920 3300049591 Bacteria 2673
166 Ga0501076_0337407 3300049592 Bacteria 1237
167 Ga0501076_0400229 3300049592 Bacteria 1129
168 Ga0501079_0074141 3300049741 Bacteria 2631
169 Ga0501079_0169099 3300049741 Bacteria 1705
170 Ga0501083_0009507 3300049744 Bacteria 6865
171 Ga0501035_0235063 3300049822 Bacteria 1561
172 nmdc:mga03683_83324_c1 3300050489 Bacteria 1384
173 nmdc:mga00v17_197800_c1 3300050491 Bacteria 1299
174 nmdc:mga00v17_211683_c1 3300050491 Bacteria 1254
175 nmdc:mga00v17_56479_c1 3300050491 Bacteria 2400
176 nmdc:mga0yw44_58902_c1 3300050492 Bacteria 2348
177 nmdc:mga0yw44_86187_c1 3300050492 Bacteria 1978
178 nmdc:mga0k408_236157_c1 3300050493 Bacteria 1092
179 nmdc:mga0k408_43886_c1 3300050493 Bacteria 2578
180 nmdc:mga06z11_115809_c1 3300050494 Bacteria 1490
181 nmdc:mga04h51_27706_c1 3300050495 Bacteria 1763
182 nmdc:mga04h51_83171_c1 3300050495 Bacteria 1140
183 nmdc:mga07m45_115234_c1 3300050496 Bacteria 1550
184 nmdc:mga07m45_57064_c1 3300050496 Bacteria 2208
185 nmdc:mga05p37_18248_c1 3300050507 Bacteria 4086
186 nmdc:mga05p37_277989_c1 3300050507 Bacteria 1998
187 nmdc:mga05p37_68964_c1 3300050507 Bacteria 4349
188 nmdc:mga09592_587160_c1 3300050508 Bacteria 955
189 nmdc:mga08y16_215995_c1 3300050511 Bacteria 1986
190 nmdc:mga0rr50_411458_c1 3300050513 Bacteria 1143
191 nmdc:mga08x19_87276_c1 3300050514 Bacteria 2055
192 Ga0495601_0000006 3300053077 Bacteria 373770
193 Ga0495612_0000004 3300053078 Bacteria 286946
194 Ga0495595_0000006 3300053084 Bacteria 231295
195 Ga0495619_0000011 3300053085 Bacteria 287128
196 Ga0500644_0004762 3300053088 Bacteria 3407
197 Ga0500644_0078260 3300053088 Bacteria 1209
198 Ga0500581_160544 3300053089 Bacteria 1044
199 Ga0500646_0003162 3300053090 Bacteria 4227
200 Ga0500651_0169696 3300053093 Bacteria 1301
201 Ga0500566_0000619 3300053094 Bacteria 19917
202 Ga0500641_0040918 3300053096 Bacteria 1873
203 Ga0500555_071082 3300053103 Bacteria 919
204 Ga0500556_0000015 3300053104 Bacteria 202598
205 Ga0500569_159699 3300053109 Bacteria 762
206 Ga0500592_005522 3300053116 Bacteria 2013
207 Ga0500593_001212 3300053117 Bacteria 9309
208 Ga0500593_163314 3300053117 Bacteria 849
209 Ga0500594_0015078 3300053118 Bacteria 1859
210 Ga0500597_029749 3300053120 Bacteria 2239
211 Ga0500608_001371 3300053122 Bacteria 8708
212 Ga0500618_022764 3300053125 Bacteria 1520
213 Ga0500642_0000019 3300053130 Bacteria 159944
214 Ga0500652_000218 3300053131 Bacteria 22005
215 Ga0500658_0077835 3300053134 Bacteria 1412
216 Ga0500658_0086786 3300053134 Bacteria 1347
217 Ga0500559_0000618 3300053136 Bacteria 24102
218 Ga0500568_0000002 3300053139 Bacteria 880601
219 Ga0500568_0004810 3300053139 Bacteria 7138
220 Ga0500577_0026517 3300053142 Bacteria 1975
221 Ga0500604_0123816 3300053151 Bacteria 866
222 Ga0500616_0000041 3300053153 Bacteria 359328
223 Ga0500622_0000576 3300053156 Bacteria 33346
224 Ga0500622_0270976 3300053156 Bacteria 736
225 Ga0500633_0019666 3300053160 Bacteria 2023
226 Ga0500636_0005050 3300053177 Bacteria 7490
227 Ga0500611_007760 3300053727 Bacteria 1629
228 Ga0500645_029261 3300053730 Bacteria 1663
229 Ga0501084_0129880 3300054114 Bacteria 2121
230 Ga0501084_0207468 3300054114 Bacteria 1653
231 Ga0501082_0052702 3300060353 Bacteria 3507
232 2512035484 2511231221 Bacteria 6846400
233 2523105713 2522572158 Bacteria 6514390
234 2603860827 2602042107 Bacteria 6226103
235 2644088282 2643221614 Bacteria 4260023
236 2644343520 2643221661 Bacteria 4267604
237 2644369003 2643221666 Bacteria 4265935
238 2857524730 2857524615 Bacteria 6615449
239 2893069251 2893066018 Bacteria 6158120
240 2897806361 2897803580 Bacteria 7000062
241 2919078614 2919073203 Bacteria 6531949
242 2941486448 2941485952 Bacteria 3591484
243 8054003579 8054002106 Bacteria 7987183
244 nmdc:mga03n38_26366_c1
245 Ga0065165_1028099
246 Ga0065165_1036419
247 Ga0070680_100269689
248 Ga0070689_100194693
249 Ga0070671_100334978
250 Ga0070667_100482375
251 Ga0070714_100344712
252 Ga0070711_100555927
253 Ga0070681_10084942
254 Ga0070679_100496981
255 Ga0068855_100467593
256 Ga0081538_10063421
257 Ga0081540_1008573
258 Ga0075368_10026661
259 Ga0075368_10054967
260 Ga0075363_100031826
261 Ga0075364_10021245
262 Ga0075364_10042770
263 Ga0075364_10207965
264 Ga0070712_100335761
265 Ga0075362_10000572
266 Ga0075362_10167958
267 Ga0075362_10216618
268 Ga0075367_10098789
269 Ga0075367_10195750
270 Ga0075369_10115255
271 Ga0075370_10039124
272 Ga0075370_10145333
273 Ga0075428_100072971
274 Ga0075428_100221531
275 Ga0075434_100646776
276 Ga0075429_100648626
277 Ga0075436_100255350
278 Ga0099795_10049359
279 Ga0111539_10252568
280 Ga0114129_10007176
281 Ga0114129_10061027
282 Ga0114129_10103201
283 Ga0105243_10627721
284 Ga0099796_10000565
285 Ga0163161_10067805
286 Ga0209676_1009658
287 Ga0209564_1001072
288 Ga0207692_10035464
289 Ga0207688_10124041
290 Ga0207693_10129060
291 Ga0207652_10207238
292 Ga0207664_10136176
293 Ga0207644_10519119
294 Ga0207665_10294662
295 Ga0207658_10564465
296 Ga0207678_10009341
297 Ga0207698_10707164
298 Ga0209179_1007067
299 Ga0209813_10009848
300 Ga0307515_10066130
301 Ga0265338_10004359
302 Ga0265338_10069874
303 Ga0265325_10007434
304 Ga0265325_10023703
305 Ga0265340_10112497
306 Ga0265339_10000151
307 Ga0265339_10085683
308 Ga0265331_10206702
309 Ga0265313_10000366
310 Ga0316579_10012107
311 Ga0265342_10008148
312 Ga0265342_10035697
313 Ga0307411_10425217
314 Ga0373936_0000545
315 Ga0373945_0011576
316 Ga0373953_0002477
317 Ga0373954_0006100
318 Ga0373957_0021211
319 Ga0373955_0000204
320 Ga0373924_0000051
321 Ga0373935_0000018
322 Ga0373935_0594556
323 Ga0373927_0015173
324 Ga0373933_0006777
325 Ga0373947_0001428
326 Ga0373937_0000571
327 Ga0373925_0000018
328 Ga0373925_0074979
329 Ga0395899_0241865
330 Ga0395901_0143470
331 Ga0451841_0198275
332 Ga0466957_0059526
333 Ga0495592_0000001
334 Ga0495629_0029110
335 Ga0495638_0243496
336 Ga0495651_0006530
337 Ga0495653_0000015
338 Ga0495662_0003120
339 Ga0495664_0000001
340 Ga0495607_0026508
341 Ga0495608_0000116
342 Ga0495610_0170084
343 Ga0495616_0173863
344 Ga0495618_0000021
345 Ga0495628_0000005
346 Ga0495630_0050999
347 Ga0495631_0046392
348 Ga0495637_0027137
349 Ga0495652_0000001
350 Ga0495640_0000006
351 Ga0495587_0000012
352 Ga0495645_0000004
353 Ga0495667_0000001
354 Ga0495634_0000388
355 Ga0495625_0015783
356 Ga0495635_0000007
357 Ga0495661_0008497
358 Ga0495657_0000250
359 Ga0495599_0000002
360 Ga0495623_0000116
361 Ga0495646_0000049
362 Ga0495613_0107598
363 Ga0495624_0020888
364 Ga0495649_0000519
365 Ga0495600_0000013
366 Ga0495604_0000007
367 Ga0495674_0000001
368 Ga0495672_0040808
369 Ga0495680_0002740
370 Ga0495675_0000014
371 Ga0495684_0000219
372 Ga0495686_0078105
373 Ga0495686_0120728
374 Ga0495593_0000454
375 Ga0495602_0000004
376 Ga0496101_0313550
377 Ga0496106_0155225
378 Ga0496110_0281669
379 Ga0496114_0027085
380 Ga0496116_0004885
381 Ga0496117_0198518
382 Ga0496118_0321464
383 Ga0496119_0110736
384 Ga0496120_0012459
385 Ga0496120_0071637
386 Ga0496121_0023431
387 Ga0496122_0014125
388 Ga0496122_0078034
389 Ga0496123_0116715
390 Ga0496124_0151191
391 Ga0496125_0000063
392 Ga0496125_0000858
393 Ga0496125_0002590
394 Ga0496125_0036860
395 Ga0496126_0108561
396 Ga0495678_042775
397 Ga0501031_0208680
398 Ga0501034_0310863
399 Ga0501036_0069292
400 Ga0501038_0051116
401 Ga0501039_0023998
402 Ga0501040_0148940
403 Ga0501041_0022186
404 Ga0501048_0064166
405 Ga0501071_0085105
406 Ga0501073_0124105
407 Ga0501073_0210561
408 Ga0501075_0068920
409 Ga0501076_0337407
410 Ga0501076_0400229
411 Ga0501079_0074141
412 Ga0501079_0169099
413 Ga0501083_0009507
414 Ga0501035_0235063
415 nmdc:mga03683_83324_c1
416 nmdc:mga00v17_197800_c1
417 nmdc:mga00v17_211683_c1
418 nmdc:mga00v17_56479_c1
419 nmdc:mga0yw44_58902_c1
420 nmdc:mga0yw44_86187_c1
421 nmdc:mga0k408_236157_c1
422 nmdc:mga0k408_43886_c1
423 nmdc:mga06z11_115809_c1
424 nmdc:mga04h51_27706_c1
425 nmdc:mga04h51_83171_c1
426 nmdc:mga07m45_115234_c1
427 nmdc:mga07m45_57064_c1
428 nmdc:mga05p37_18248_c1
429 nmdc:mga05p37_277989_c1
430 nmdc:mga05p37_68964_c1
431 nmdc:mga09592_587160_c1
432 nmdc:mga08y16_215995_c1
433 nmdc:mga0rr50_411458_c1
434 nmdc:mga08x19_87276_c1
435 Ga0495601_0000006
436 Ga0495612_0000004
437 Ga0495595_0000006
438 Ga0495619_0000011
439 Ga0500644_0004762
440 Ga0500644_0078260
441 Ga0500581_160544
442 Ga0500646_0003162
443 Ga0500651_0169696
444 Ga0500566_0000619
445 Ga0500641_0040918
446 Ga0500555_071082
447 Ga0500556_0000015
448 Ga0500569_159699
449 Ga0500592_005522
450 Ga0500593_001212
451 Ga0500593_163314
452 Ga0500594_0015078
453 Ga0500597_029749
454 Ga0500608_001371
455 Ga0500618_022764
456 Ga0500642_0000019
457 Ga0500652_000218
458 Ga0500658_0077835
459 Ga0500658_0086786
460 Ga0500559_0000618
461 Ga0500568_0000002
462 Ga0500568_0004810
463 Ga0500577_0026517
464 Ga0500604_0123816
465 Ga0500616_0000041
466 Ga0500622_0000576
467 Ga0500622_0270976
468 Ga0500633_0019666
469 Ga0500636_0005050
470 Ga0500611_007760
471 Ga0500645_029261
472 Ga0501084_0129880
473 Ga0501084_0207468
474 Ga0501082_0052702
475 2512035484
476 2523105713
477 2603860827
478 2644088282
479 2644343520
480 2644369003
481 2857524730
482 2893069251
483 2897806361
484 2919078614
485 2941486448
486 8054003579

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF22692

LlgE_F_G_D1

Flagellar hook protein FlgE/F/G D1 domain

136

201

0.97

PF00460

Flg_bb_rod

Flagella basal body rod protein

53

83

0.96

PF06429

Flg_bbr_C

Flagellar basal body rod FlgEFG protein C-terminal

247

291

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
7cg0-assembly1.cif.gz_m cryo-em structure of the flagellar proximal rod with flif peptides from salmonella 0.9512 7 37
7nvg-assembly1.cif.gz_q2 salmonella flagellar basal body refined in c1 map 0.8884 6 247
7cgo-assembly1.cif.gz_T cryo-em structure of the flagellar motor-hook complex from salmonella 0.8763 7 247
7cgo-assembly1.cif.gz_Q cryo-em structure of the flagellar motor-hook complex from salmonella 0.8738 7 247
7cgo-assembly1.cif.gz_R cryo-em structure of the flagellar motor-hook complex from salmonella 0.8729 6 247
ID Description Score Start End Superfamily
af_F1RAR0_1_146_1.20.1270.60 Mainly Alpha;Up-down Bundle;Substrate Binding Domain Of Dnak; Chain:A; Domain 2;Arfaptin homology (AH) domain/BAR domain 0.6859 214 254 1.20.1270.60
af_Q8BHH8_3_217_1.20.140.150 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3; 0.6825 1 43 1.20.140.150
af_D4AEE9_24_83_2.20.25.190 Mainly Beta;Single Sheet;N-terminal domain of TfIIb; 0.534 135 166 2.20.25.190
af_Q54H44_165_325_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.4355 130 178 2.130.10.10
af_H2KZQ6_199_375_1.20.120.350 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Voltage-gated potassium channels. Chain C 0.4084 11 71 1.20.120.350
ID Description Score Start End GO Terms
AF-A0A4Q8R1C7-F1-model_v4 Flagellar basal-body rod protein FlgF 0.9602 1 254 GO:0030694
GO:0071978
AF-A0A848W2Z2-F1-model_v4 Flagellar basal-body rod protein FlgF 0.9587 1 253 GO:0030694
GO:0071978
AF-A0A651F629-F1-model_v4 Flagellar basal-body rod protein FlgF 0.9561 1 254 GO:0030694
GO:0071978
AF-A0A848W2Z2-F1-model_v4 Flagellar basal-body rod protein FlgF 0.9548 1 253 GO:0030694
GO:0071978
AF-A0A2E2WL45-F1-model_v4 Flagellar basal-body rod protein FlgF 0.9537 1 250 GO:0030694
GO:0071978

Map