F356333

General Info

Members Datasets Scaffolds Average Seq Length
244 185 488 260

Family's Representative Sequence

Representative Sequence 3300005614|Ga0068856_100219488|Ga0068856_1002194882
Length 299
Sequence MAARQLRVPDSVCSVPGTVRSVDLEIASGRGVTVLQSRAMSAWNDEQYLKFGDERTRPAQELLNRVPLGAAERVVDLGCGPGNSTALLAARFPAARVTGVDNSPEMLARARRDLPSVTWVEADVASYRADGLVDLLFANAVLHWLPEHDRLLPALLAQVRPGGVLAVQMPRNFAEPSHMLMRDTTPDATTSIVGWSERLRGVRALTPVAAPEVYYDLLAPHATHVDLWQTNYQHVMPDAAAIVEWVKGTGLRPYLDAIPEAERAHYLERYTAGIERAYPPRADGRRLFNFPRLFLVAVR

Samples

Sample ID Description Type Environment
1 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
2 3300002739 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA Metagenome Endosphere
3 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
4 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
5 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
6 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
7 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
8 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
9 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
10 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
11 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
12 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
13 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
14 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
15 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
16 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
17 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
18 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
19 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
20 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
23 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
24 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
25 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
26 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
27 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
28 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
29 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
30 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
31 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
32 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
33 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
34 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
35 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
36 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
37 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
38 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
39 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
40 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
41 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
42 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
44 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
45 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
46 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
47 3300009986 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_92 metaG Metagenome Rhizosphere
48 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
49 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
50 3300013249 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.3_F06 Metagenome Rhizosphere
51 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
52 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
53 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
54 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
55 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
56 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
57 3300021327 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2 Metagenome Nodule
58 3300022739 Root nodule microbial communities from Medicago polymorpha collected in Santa Monica, California, United States - brown nodules Metagenome Nodule
59 3300022740 Root nodule microbial communities from Medicago polymorpha collected in Santa Monica, California, United States - pink nodules Metagenome Nodule
60 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
61 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
62 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
63 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
64 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
66 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
67 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
88 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
89 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
90 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
91 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
92 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
93 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
94 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
95 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
96 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
97 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
98 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
99 3300031967 Medicago polymorpha root nodule microbial communities from Los Angeles, California, United States - elongated nodules Metagenome Nodule
100 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
101 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
102 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
103 3300033430 Medicago polymorpha root nodule microbial communities from Los Angeles, California, United States - small nodules Metagenome Nodule
104 3300033464 Medicago polymorpha root nodule microbial communities from Los Angeles, California, United States - branched nodules Metagenome Nodule
105 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
106 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
107 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
108 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
109 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
110 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
111 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
112 3300038996 Genetically engineered switchgrass root microbial communities from Knoxville, USA - plot19 Metagenome Rhizosphere
113 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
114 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
115 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
116 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
117 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
118 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
119 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
120 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
121 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
122 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
123 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
124 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
125 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
126 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
127 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
128 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
129 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
134 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
135 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
136 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
137 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
138 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
139 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
140 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
141 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
142 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
143 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
144 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
145 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
146 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
147 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
148 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
149 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
150 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
151 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
152 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
153 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
154 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
155 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
156 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
157 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
158 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
159 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
160 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
161 2508501122 Ensifer yinggardensis WSM1721 Isolate Nodule
162 2509276019 Ensifer aridi TW10 Isolate Nodule
163 2522572158 Azospirillum halopraeferens DSM 3675 Isolate Unclassified
164 2582581283 Rhizobium sp. OK665 Isolate Rhizosphere
165 2582581306 Rhizobium sp. YR295 Isolate Rhizosphere
166 2582581865 Rhizobium sp. CF258 Isolate Rhizosphere
167 2597490356 Azospirillum brasilense sp7 Isolate Unclassified
168 2599185352 Sinorhizobium sp. NFACC03 Isolate Rhizoplane
169 2643221607 Rhizobium sp. Root73 Isolate Unclassified
170 2643221636 Rhizobium sp. Root1204 Isolate Unclassified
171 2643221637 Rhizobium sp. Root1212 Isolate Unclassified
172 2643221686 Rhizobium sp. Root1334 Isolate Unclassified
173 2643221689 Rhizobium sp. Root483D2 Isolate Unclassified
174 2643221718 Rhizobium sp. Root268 Isolate Unclassified
175 2643221723 Ensifer sp. Root278 Isolate Unclassified
176 2657244999 Sinorhizobium sojae CCBAU 05684 Isolate Unclassified
177 2791355082 Ensifer alkalisoli YIC4027 Isolate Nodule
178 2802429268 Sinorhizobium sojae CCBAU 05684 Isolate Unclassified
179 2821443989 Inquilinus ginsengisoli 584 Isolate Unclassified
180 2844533157 Inquilinus sp. R-72501 v. 2 Isolate Unclassified
181 2846952575 Azospirillum brasilense sp7 Isolate Unclassified
182 2848858292 Azospirillum brasilense Az39 Isolate Unclassified
183 2850079185 Ensifer aridi JNVU TP6 Isolate Unclassified
184 639633007 Azoarcus olearius BH72 Isolate Unclassified
185 8049293176 Ensifer alkalisoli YIC4027 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 89.75
Metatranscriptomes 0
Isolates 10.25

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.2
Nodule 6.15
Rhizoplane 3.69
Rhizosphere 73.36
Stem 0
Stem Tuber 0
Unclassified 4.1

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068856_100219488 3300005614 Bacteria 1917
2 JGI25158J39367_1001337 3300002739 Bacteria 4356
3 JGI25151J46595_10001965 3300003187 Bacteria 12955
4 JGI25153J46596_10011972 3300003215 Bacteria 3792
5 rootH2_10234541 3300003320 Bacteria 1167
6 rootH1_10038156 3300003323 Bacteria 6713
7 Ga0055524_1000079 3300003775 Bacteria 120203
8 Ga0055524_1000777 3300003775 Bacteria 21429
9 Ga0055530_10003164 3300003791 Bacteria 9672
10 Ga0055540_1000004 3300003792 Bacteria 395545
11 Ga0055531_10035916 3300003794 Bacteria 1540
12 Ga0070658_10089738 3300005327 Bacteria 2531
13 Ga0070683_100000006 3300005329 Bacteria 361071
14 Ga0070670_100578368 3300005331 Unclassified 1004
15 Ga0070680_100053370 3300005336 Bacteria 3300
16 Ga0070680_100068744 3300005336 Bacteria 2907
17 Ga0070680_100092267 3300005336 Bacteria 2507
18 Ga0070680_100218158 3300005336 Bacteria 1610
19 Ga0070660_100160970 3300005339 Bacteria 1809
20 Ga0070668_100312712 3300005347 Bacteria 1320
21 Ga0070659_100157677 3300005366 Bacteria 1854
22 Ga0070713_100018366 3300005436 Bacteria 5315
23 Ga0070711_100555799 3300005439 Bacteria 953
24 Ga0070705_100408480 3300005440 Bacteria 1007
25 Ga0070681_10010115 3300005458 Bacteria 9299
26 Ga0070681_10017096 3300005458 Bacteria 7249
27 Ga0070681_10221104 3300005458 Bacteria 1809
28 Ga0070707_100001640 3300005468 Bacteria 21720
29 Ga0070698_100313081 3300005471 Bacteria 1500
30 Ga0070679_100035679 3300005530 Bacteria 4933
31 Ga0070679_100107630 3300005530 Bacteria 2774
32 Ga0070684_100000018 3300005535 Bacteria 136597
33 Ga0070697_100050017 3300005536 Unclassified 3392
34 Ga0068855_100064797 3300005563 Bacteria 4261
35 Ga0068855_100760593 3300005563 Unclassified 1032
36 Ga0068856_100000405 3300005614 Bacteria 47341
37 Ga0068856_100066001 3300005614 Bacteria 3576
38 Ga0068856_100070803 3300005614 Bacteria 3451
39 Ga0068856_100182346 3300005614 Bacteria 2113
40 Ga0068852_100083635 3300005616 Bacteria 2838
41 Ga0068861_100004019 3300005719 Bacteria 9848
42 Ga0068863_100181569 3300005841 Bacteria 2020
43 Ga0068863_100332856 3300005841 Bacteria 1476
44 Ga0081538_10030634 3300005981 Bacteria 3647
45 Ga0081540_1027305 3300005983 Bacteria 3238
46 Ga0081539_10214244 3300005985 Bacteria 880
47 Ga0070717_10020390 3300006028 Bacteria 5213
48 Ga0075430_100022130 3300006846 Bacteria 5404
49 Ga0075430_100022243 3300006846 Bacteria 5393
50 Ga0075431_100000797 3300006847 Bacteria 27524
51 Ga0075431_100024002 3300006847 Bacteria 6244
52 Ga0075431_100058230 3300006847 Bacteria 3986
53 Ga0075431_100803058 3300006847 Unclassified 914
54 Ga0075429_100009202 3300006880 Bacteria 8577
55 Ga0079104_1000100 3300006946 Bacteria 126924
56 Ga0079104_1014594 3300006946 Bacteria 2364
57 Ga0075435_100195489 3300007076 Bacteria 1713
58 Ga0099794_10092022 3300007265 Bacteria 1506
59 Ga0105240_10002249 3300009093 Bacteria 31352
60 Ga0105240_10039909 3300009093 Bacteria 6008
61 Ga0105240_10070524 3300009093 Bacteria 4323
62 Ga0105240_10208004 3300009093 Bacteria 2288
63 Ga0114129_10012822 3300009147 Bacteria 11929
64 Ga0114129_10046885 3300009147 Bacteria 6074
65 Ga0114129_10368926 3300009147 Bacteria 1898
66 Ga0105248_10090931 3300009177 Bacteria 3437
67 Ga0105248_10302497 3300009177 Bacteria 1801
68 Ga0105237_10006483 3300009545 Bacteria 12971
69 Ga0105237_10074918 3300009545 Bacteria 3376
70 Ga0105238_10019445 3300009551 Bacteria 6916
71 Ga0105249_10022219 3300009553 Bacteria 5681
72 Ga0105033_101357 3300009986 Bacteria 1989
73 Ga0157370_10059336 3300013104 Bacteria 3635
74 Ga0157369_10136203 3300013105 Bacteria 2600
75 Ga0157369_10137614 3300013105 Bacteria 2585
76 Ga0171463_1001 3300013249 Bacteria 1406070
77 Ga0163162_10781450 3300013306 Unclassified 1073
78 Ga0157372_10142547 3300013307 Bacteria 2762
79 Ga0157372_10550640 3300013307 Bacteria 1345
80 Ga0157375_10149380 3300013308 Bacteria 2470
81 Ga0163163_10000443 3300014325 Bacteria 37875
82 Ga0157376_10523752 3300014969 Bacteria 1169
83 Ga0163161_10304394 3300017792 Bacteria 1256
84 Ga0214543_1000003 3300021327 Bacteria 692327
85 Ga0228711_1000001 3300022739 Bacteria 357377
86 Ga0228710_1000001 3300022740 Bacteria 314328
87 Ga0209130_1001202 3300025284 Bacteria 18410
88 Ga0209675_1014978 3300025291 Bacteria 2328
89 Ga0209025_1000514 3300025294 Bacteria 73822
90 Ga0209758_1001641 3300025297 Bacteria 25405
91 Ga0209050_1000677 3300025298 Bacteria 51357
92 Ga0209256_1000011 3300025299 Bacteria 865309
93 Ga0207426_1000066 3300025302 Bacteria 351182
94 Ga0209051_1000016 3300025303 Bacteria 541891
95 Ga0209257_1000102 3300025304 Bacteria 251074
96 Ga0207707_10031763 3300025912 Bacteria 4622
97 Ga0207695_10001703 3300025913 Bacteria 35223
98 Ga0207695_10008082 3300025913 Bacteria 13237
99 Ga0207695_10049348 3300025913 Bacteria 4438
100 Ga0207695_10278249 3300025913 Bacteria 1567
101 Ga0207671_10008437 3300025914 Bacteria 8738
102 Ga0207660_10007151 3300025917 Bacteria 7228
103 Ga0207660_10116835 3300025917 Bacteria 2015
104 Ga0207657_10113651 3300025919 Bacteria 2233
105 Ga0207652_10008164 3300025921 Bacteria 8406
106 Ga0207652_10010997 3300025921 Bacteria 7297
107 Ga0207646_10017116 3300025922 Bacteria 6789
108 Ga0207700_10109274 3300025928 Bacteria 2222
109 Ga0207711_10499521 3300025941 Bacteria 1134
110 Ga0207661_10000011 3300025944 Bacteria 361200
111 Ga0207661_10365954 3300025944 Bacteria 1303
112 Ga0207667_10032378 3300025949 Bacteria 5635
113 Ga0207712_10037929 3300025961 Bacteria 3292
114 Ga0207668_10333884 3300025972 Bacteria 1262
115 Ga0207639_10384483 3300026041 Bacteria 1261
116 Ga0207702_10000153 3300026078 Bacteria 80953
117 Ga0207702_10058784 3300026078 Unclassified 3273
118 Ga0207702_10094624 3300026078 Bacteria 2623
119 Ga0207702_10385573 3300026078 Unclassified 1348
120 Ga0207641_10058178 3300026088 Bacteria 3289
121 Ga0207641_10227302 3300026088 Unclassified 1733
122 Ga0207674_10141475 3300026116 Bacteria 2365
123 Ga0207675_100002359 3300026118 Bacteria 18688
124 Ga0209281_1000084 3300027111 Bacteria 254215
125 Ga0209281_1000164 3300027111 Bacteria 157372
126 Ga0209282_1000007 3300027666 Bacteria 254917
127 Ga0307515_10039061 3300028794 Bacteria 7565
128 Ga0265331_10047059 3300031250 Bacteria 2077
129 Ga0265327_10000082 3300031251 Bacteria 205610
130 Ga0265327_10000900 3300031251 Bacteria 43844
131 Ga0265327_10007968 3300031251 Bacteria 8012
132 Ga0265316_10035610 3300031344 Bacteria 4032
133 Ga0307408_100026060 3300031548 Bacteria 4010
134 Ga0307508_10003532 3300031616 Bacteria 15752
135 Ga0265314_10019594 3300031711 Bacteria 5239
136 Ga0265342_10030294 3300031712 Bacteria 3353
137 Ga0265342_10040165 3300031712 Bacteria 2839
138 Ga0307406_10074280 3300031901 Bacteria 2238
139 Ga0307412_10011398 3300031911 Bacteria 5150
140 Ga0307412_10612168 3300031911 Bacteria 924
141 Ga0315914_1000006 3300031967 Bacteria 239817
142 Ga0307409_100015669 3300031995 Bacteria 4984
143 Ga0307416_100118438 3300032002 Unclassified 2353
144 Ga0307411_10101303 3300032005 Bacteria 2038
145 Ga0315913_1000002 3300033430 Bacteria 241452
146 Ga0315915_1000001 3300033464 Bacteria 481518
147 Ga0373953_0112669 3300035117 Bacteria 1151
148 Ga0373933_0354437 3300035724 Bacteria 953
149 Ga0373937_0074813 3300036401 Bacteria 3126
150 Ga0373937_0088901 3300036401 Bacteria 2860
151 Ga0373937_0444349 3300036401 Bacteria 1231
152 Ga0373925_0050733 3300037068 Bacteria 3096
153 Ga0395899_0000045 3300037312 Bacteria 247620
154 Ga0395900_0075980 3300037418 Bacteria 3453
155 Ga0395898_0000057 3300037466 Bacteria 277915
156 Ga0242420_020682 3300038996 Bacteria 1173
157 Ga0451807_1607260 3300041486 Bacteria 1317
158 Ga0466961_0313639 3300044693 Bacteria 957
159 Ga0466963_0171292 3300044694 Bacteria 1513
160 Ga0466963_0398914 3300044694 Bacteria 970
161 Ga0466970_0080743 3300044765 Bacteria 1758
162 Ga0466959_0046019 3300045049 Bacteria 3212
163 Ga0495639_0109091 3300046475 Bacteria 1312
164 Ga0495664_0083656 3300046477 Bacteria 1915
165 Ga0495610_0034722 3300046512 Bacteria 2595
166 Ga0495625_0229987 3300046660 Bacteria 1211
167 Ga0496103_0113960 3300048906 Bacteria 1719
168 Ga0496106_0038282 3300048909 Bacteria 3588
169 Ga0496107_0083119 3300048910 Bacteria 2335
170 Ga0496110_0086750 3300048913 Bacteria 2795
171 Ga0496113_0085641 3300048916 Bacteria 2421
172 Ga0496114_0084453 3300048917 Bacteria 2688
173 Ga0496115_0142027 3300048918 Bacteria 1981
174 Ga0501031_0040535 3300049568 Bacteria 3041
175 Ga0501034_0001215 3300049571 Bacteria 35262
176 Ga0501037_0074101 3300049573 Bacteria 2474
177 Ga0501046_0018856 3300049580 Bacteria 5731
178 Ga0501048_0069486 3300049582 Bacteria 2488
179 Ga0501067_0080249 3300049583 Bacteria 1808
180 Ga0501067_0107406 3300049583 Bacteria 1551
181 Ga0501068_0022061 3300049584 Bacteria 3721
182 Ga0501068_0126181 3300049584 Bacteria 1598
183 Ga0501069_0009236 3300049585 Bacteria 5205
184 Ga0501070_0297319 3300049586 Bacteria 1316
185 Ga0501071_0457321 3300049587 Bacteria 977
186 Ga0501072_0001948 3300049588 Bacteria 15375
187 Ga0501072_0018515 3300049588 Bacteria 5365
188 Ga0501072_0246569 3300049588 Bacteria 1423
189 Ga0501073_0044152 3300049589 Unclassified 3141
190 Ga0501074_0035682 3300049590 Bacteria 3603
191 Ga0501074_0107607 3300049590 Bacteria 1996
192 Ga0501075_0004369 3300049591 Bacteria 9561
193 Ga0501075_0079485 3300049591 Bacteria 2482
194 Ga0501076_0111156 3300049592 Bacteria 2215
195 Ga0501076_0115669 3300049592 Bacteria 2170
196 Ga0501077_0005749 3300049593 Bacteria 7555
197 Ga0501079_0017462 3300049741 Bacteria 5479
198 Ga0501081_0131797 3300049743 Bacteria 1786
199 Ga0501083_0074303 3300049744 Bacteria 2258
200 Ga0501083_0315196 3300049744 Bacteria 1017
201 Ga0501035_0601252 3300049822 Bacteria 896
202 Ga0501044_0166437 3300049823 Bacteria 2179
203 nmdc:mga05p37_152874_c1 3300050507 Eukaryota 2821
204 nmdc:mga05p37_342730_c1 3300050507 Bacteria 1762
205 nmdc:mga09592_24779_c1 3300050508 Bacteria 4961
206 nmdc:mga09592_32652_c1 3300050508 Bacteria 4340
207 nmdc:mga0qj67_16399_c1 3300050509 Bacteria 5618
208 nmdc:mga0qj67_24052_c1 3300050509 Bacteria 4693
209 nmdc:mga06r32_163319_c1 3300050510 Eukaryota 2210
210 nmdc:mga06r32_60018_c1 3300050510 Bacteria 3659
211 nmdc:mga0n895_179696_c1 3300050512 Bacteria 2147
212 nmdc:mga0a205_167854_c1 3300050515 Bacteria 2090
213 Ga0500642_0000765 3300053130 Bacteria 9429
214 Ga0500588_0000215 3300053146 Bacteria 8140
215 Ga0500637_0011546 3300053178 Bacteria 4574
216 Ga0501084_0008684 3300054114 Bacteria 8401
217 Ga0501084_0069868 3300054114 Bacteria 2940
218 Ga0501082_0000475 3300060353 Bacteria 35497
219 Ga0501082_0103759 3300060353 Bacteria 2459
220 2509107394 2508501122 Bacteria 6292184
221 2509374616 2509276019 Bacteria 6802256
222 2523106140 2522572158 Bacteria 6514390
223 2585165337 2582581283 Bacteria 6030556
224 2585266434 2582581306 Bacteria 6450535
225 2585387412 2582581865 Bacteria 6644329
226 2599105314 2597490356 Bacteria 7030811
227 2600191757 2599185352 Bacteria 7228948
228 2644046792 2643221607 Bacteria 6314006
229 2644202499 2643221636 Bacteria 6583769
230 2644206398 2643221637 Bacteria 5345260
231 2644479581 2643221686 Bacteria 6310811
232 2644500766 2643221689 Bacteria 6042950
233 2644650045 2643221718 Bacteria 5345506
234 2644673727 2643221723 Bacteria 7095460
235 2657682162 2657244999 Bacteria 5946535
236 2792584010 2791355082 Bacteria 5973319
237 2804751180 2802429268 Bacteria 6094027
238 2821449153 2821443989 Bacteria 7658172
239 2844539266 2844533157 Bacteria 7517899
240 2846955004 2846952575 Bacteria 6587527
241 2848858703 2848858292 Bacteria 7391279
242 2850080316 2850079185 Bacteria 6848280
243 639787789 639633007 Bacteria 4376040
244 8049293760 8049293176 Bacteria 6128433
245 Ga0068856_100219488
246 JGI25158J39367_1001337
247 JGI25151J46595_10001965
248 JGI25153J46596_10011972
249 rootH2_10234541
250 rootH1_10038156
251 Ga0055524_1000079
252 Ga0055524_1000777
253 Ga0055530_10003164
254 Ga0055540_1000004
255 Ga0055531_10035916
256 Ga0070658_10089738
257 Ga0070683_100000006
258 Ga0070670_100578368
259 Ga0070680_100053370
260 Ga0070680_100068744
261 Ga0070680_100092267
262 Ga0070680_100218158
263 Ga0070660_100160970
264 Ga0070668_100312712
265 Ga0070659_100157677
266 Ga0070713_100018366
267 Ga0070711_100555799
268 Ga0070705_100408480
269 Ga0070681_10010115
270 Ga0070681_10017096
271 Ga0070681_10221104
272 Ga0070707_100001640
273 Ga0070698_100313081
274 Ga0070679_100035679
275 Ga0070679_100107630
276 Ga0070684_100000018
277 Ga0070697_100050017
278 Ga0068855_100064797
279 Ga0068855_100760593
280 Ga0068856_100000405
281 Ga0068856_100066001
282 Ga0068856_100070803
283 Ga0068856_100182346
284 Ga0068852_100083635
285 Ga0068861_100004019
286 Ga0068863_100181569
287 Ga0068863_100332856
288 Ga0081538_10030634
289 Ga0081540_1027305
290 Ga0081539_10214244
291 Ga0070717_10020390
292 Ga0075430_100022130
293 Ga0075430_100022243
294 Ga0075431_100000797
295 Ga0075431_100024002
296 Ga0075431_100058230
297 Ga0075431_100803058
298 Ga0075429_100009202
299 Ga0079104_1000100
300 Ga0079104_1014594
301 Ga0075435_100195489
302 Ga0099794_10092022
303 Ga0105240_10002249
304 Ga0105240_10039909
305 Ga0105240_10070524
306 Ga0105240_10208004
307 Ga0114129_10012822
308 Ga0114129_10046885
309 Ga0114129_10368926
310 Ga0105248_10090931
311 Ga0105248_10302497
312 Ga0105237_10006483
313 Ga0105237_10074918
314 Ga0105238_10019445
315 Ga0105249_10022219
316 Ga0105033_101357
317 Ga0157370_10059336
318 Ga0157369_10136203
319 Ga0157369_10137614
320 Ga0171463_1001
321 Ga0163162_10781450
322 Ga0157372_10142547
323 Ga0157372_10550640
324 Ga0157375_10149380
325 Ga0163163_10000443
326 Ga0157376_10523752
327 Ga0163161_10304394
328 Ga0214543_1000003
329 Ga0228711_1000001
330 Ga0228710_1000001
331 Ga0209130_1001202
332 Ga0209675_1014978
333 Ga0209025_1000514
334 Ga0209758_1001641
335 Ga0209050_1000677
336 Ga0209256_1000011
337 Ga0207426_1000066
338 Ga0209051_1000016
339 Ga0209257_1000102
340 Ga0207707_10031763
341 Ga0207695_10001703
342 Ga0207695_10008082
343 Ga0207695_10049348
344 Ga0207695_10278249
345 Ga0207671_10008437
346 Ga0207660_10007151
347 Ga0207660_10116835
348 Ga0207657_10113651
349 Ga0207652_10008164
350 Ga0207652_10010997
351 Ga0207646_10017116
352 Ga0207700_10109274
353 Ga0207711_10499521
354 Ga0207661_10000011
355 Ga0207661_10365954
356 Ga0207667_10032378
357 Ga0207712_10037929
358 Ga0207668_10333884
359 Ga0207639_10384483
360 Ga0207702_10000153
361 Ga0207702_10058784
362 Ga0207702_10094624
363 Ga0207702_10385573
364 Ga0207641_10058178
365 Ga0207641_10227302
366 Ga0207674_10141475
367 Ga0207675_100002359
368 Ga0209281_1000084
369 Ga0209281_1000164
370 Ga0209282_1000007
371 Ga0307515_10039061
372 Ga0265331_10047059
373 Ga0265327_10000082
374 Ga0265327_10000900
375 Ga0265327_10007968
376 Ga0265316_10035610
377 Ga0307408_100026060
378 Ga0307508_10003532
379 Ga0265314_10019594
380 Ga0265342_10030294
381 Ga0265342_10040165
382 Ga0307406_10074280
383 Ga0307412_10011398
384 Ga0307412_10612168
385 Ga0315914_1000006
386 Ga0307409_100015669
387 Ga0307416_100118438
388 Ga0307411_10101303
389 Ga0315913_1000002
390 Ga0315915_1000001
391 Ga0373953_0112669
392 Ga0373933_0354437
393 Ga0373937_0074813
394 Ga0373937_0088901
395 Ga0373937_0444349
396 Ga0373925_0050733
397 Ga0395899_0000045
398 Ga0395900_0075980
399 Ga0395898_0000057
400 Ga0242420_020682
401 Ga0451807_1607260
402 Ga0466961_0313639
403 Ga0466963_0171292
404 Ga0466963_0398914
405 Ga0466970_0080743
406 Ga0466959_0046019
407 Ga0495639_0109091
408 Ga0495664_0083656
409 Ga0495610_0034722
410 Ga0495625_0229987
411 Ga0496103_0113960
412 Ga0496106_0038282
413 Ga0496107_0083119
414 Ga0496110_0086750
415 Ga0496113_0085641
416 Ga0496114_0084453
417 Ga0496115_0142027
418 Ga0501031_0040535
419 Ga0501034_0001215
420 Ga0501037_0074101
421 Ga0501046_0018856
422 Ga0501048_0069486
423 Ga0501067_0080249
424 Ga0501067_0107406
425 Ga0501068_0022061
426 Ga0501068_0126181
427 Ga0501069_0009236
428 Ga0501070_0297319
429 Ga0501071_0457321
430 Ga0501072_0001948
431 Ga0501072_0018515
432 Ga0501072_0246569
433 Ga0501073_0044152
434 Ga0501074_0035682
435 Ga0501074_0107607
436 Ga0501075_0004369
437 Ga0501075_0079485
438 Ga0501076_0111156
439 Ga0501076_0115669
440 Ga0501077_0005749
441 Ga0501079_0017462
442 Ga0501081_0131797
443 Ga0501083_0074303
444 Ga0501083_0315196
445 Ga0501035_0601252
446 Ga0501044_0166437
447 nmdc:mga05p37_152874_c1
448 nmdc:mga05p37_342730_c1
449 nmdc:mga09592_24779_c1
450 nmdc:mga09592_32652_c1
451 nmdc:mga0qj67_16399_c1
452 nmdc:mga0qj67_24052_c1
453 nmdc:mga06r32_163319_c1
454 nmdc:mga06r32_60018_c1
455 nmdc:mga0n895_179696_c1
456 nmdc:mga0a205_167854_c1
457 Ga0500642_0000765
458 Ga0500588_0000215
459 Ga0500637_0011546
460 Ga0501084_0008684
461 Ga0501084_0069868
462 Ga0501082_0000475
463 Ga0501082_0103759
464 2509107394
465 2509374616
466 2523106140
467 2585165337
468 2585266434
469 2585387412
470 2599105314
471 2600191757
472 2644046792
473 2644202499
474 2644206398
475 2644479581
476 2644500766
477 2644650045
478 2644673727
479 2657682162
480 2792584010
481 2804751180
482 2821449153
483 2844539266
484 2846955004
485 2848858703
486 2850080316
487 639787789
488 8049293760

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08241

Methyltransf_11

Methyltransferase domain

75

167

0.94

PF13649

Methyltransf_25

Methyltransferase domain

74

163

0.94

PF13847

Methyltransf_31

Methyltransferase domain

68

235

0.87

PF01728

FtsJ

FtsJ-like methyltransferase

59

191

0.86

PF08242

Methyltransf_12

Methyltransferase domain

75

165

0.86

PF05175

MTS

Methyltransferase small domain

53

175

0.83

PF13489

Methyltransf_23

Methyltransferase domain

51

254

0.7

Structural Annotation

Top 5 Hits

ID Description Score Start End
2p35-assembly1.cif.gz_B crystal structure of trans-aconitate methyltransferase from agrobacterium tumefaciens 0.9577 13 256
2p35-assembly1.cif.gz_B crystal structure of trans-aconitate methyltransferase from agrobacterium tumefaciens 0.9499 13 256
2p35-assembly1.cif.gz_A crystal structure of trans-aconitate methyltransferase from agrobacterium tumefaciens 0.9381 6 256
2p35-assembly1.cif.gz_A crystal structure of trans-aconitate methyltransferase from agrobacterium tumefaciens 0.9306 6 256
3ccf-assembly1.cif.gz_A crystal structure of putative methyltransferase (yp_321342.1) from anabaena variabilis atcc 29413 at 1.90 a resolution 0.8252 20 256
ID Description Score Start End Superfamily
2p35B01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9552 13 256 3.40.50.150
2p35B01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9439 13 256 3.40.50.150
2p35A02 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;S-adenosyl-L-methionine-dependent methyltransferases 0.8805 131 235 1.10.150.290
3dtnB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8678 10 130 3.40.50.150
2p35A02 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;S-adenosyl-L-methionine-dependent methyltransferases 0.8567 131 235 1.10.150.290
ID Description Score Start End GO Terms
AF-A4A7J4-F1-model_v4 Trans-aconitate methyltransferase (EC 2.1.1.144) 0.9746 1 255 GO:0030798
GO:0032259
AF-A0A0F4YE69-F1-model_v4 Methyltransferase domain-containing protein 0.9695 3 256 GO:0030798
GO:0032259
AF-A0A0A1SRF0-F1-model_v4 Methyltransferase domain-containing protein 0.9689 1 256 GO:0030798
GO:0032259
AF-A0A0Q8BKD9-F1-model_v4 deleted 0.9683 1 256
AF-A4A7J4-F1-model_v4 Trans-aconitate methyltransferase (EC 2.1.1.144) 0.9671 1 255 GO:0030798
GO:0032259

Map