F356380

General Info

Members Datasets Scaffolds Average Seq Length
244 208 488 398

Family's Representative Sequence

Representative Sequence 3300006195|Ga0075366_10003976|Ga0075366_100039762
Length 446
Sequence LQGSTLYPLNSAVQPAGALAAGALHGIKVVDLSRVLAGPWCGQNLADLGADVIKVERPGVGDDTRGWGPPWMASPDDVSRESTYFQSANRGKRSIAVDIAAPEGQDIVRALVQQADVLIENYKVGSLERYGLDYPALSALNPRLVYCSITGFGQTGPRATEPGYDFVVQALGGLMSITGERDDRPGGGPQKVGVAVADLMTGLYATIAIQAALIARERTGLGQHCDLALFDVQLAALANQATGYLATGRSPGRYGNAHASIVPYQSFRGQDGDFIIACGNDAQFAALCRAIGLDQLVADPRFARNSDRVEHRQQLEDVLAARFATAPVAEWVRLAQSVGVPASAINDIEQAFAEPQAVARGMIVGVPHPTNPDFAVVGSPIKLSQTPVQYAAPPPLLGEHTEQVLQERLGMDRAAIAALAGRGIVETSAVGASAPVEHGRTDPVGT

Samples

Sample ID Description Type Environment
1 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
2 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
3 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
10 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
11 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
12 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
13 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
14 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
15 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
16 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
17 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
18 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
19 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
20 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
21 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
22 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
23 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
24 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
25 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
26 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
27 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
28 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
29 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
30 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
31 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
32 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
33 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
34 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
35 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
36 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
37 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
38 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
39 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
40 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
41 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
42 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
43 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
44 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
45 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
46 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
47 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
48 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
49 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
50 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
52 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
53 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
54 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
55 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
56 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
57 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
58 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
59 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
60 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
61 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
62 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
63 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
64 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
65 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
66 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
67 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
68 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
69 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
70 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
71 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
72 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
73 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
74 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
75 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
115 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
118 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
119 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
120 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
121 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
122 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
123 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
124 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
125 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
126 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
127 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
128 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
129 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
130 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
131 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
132 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
133 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
134 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
135 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
136 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
137 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
138 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
139 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
140 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
141 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
142 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
143 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
144 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
145 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
146 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
147 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
148 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
149 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
150 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
151 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
152 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
153 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
154 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
155 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
156 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
157 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
158 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
159 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
160 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
161 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
162 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
163 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
164 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
165 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
166 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
167 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
168 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
169 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
170 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
171 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
172 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
173 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
174 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
175 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
176 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
177 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
178 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
179 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
180 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
181 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
182 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
183 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
184 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
185 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
186 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
187 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
188 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
189 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
190 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
191 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
192 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
193 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
194 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
195 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
196 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
197 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
198 2515154189 Paraburkholderia nodosa DSM 21604 Isolate Unclassified
199 2643221546 Microbacterium sp. Root53 Isolate Unclassified
200 2643221621 Achromobacter sp. Root83 Isolate Unclassified
201 2643221654 Rhizobacter sp. Root404 Isolate Unclassified
202 2721755523 Delftia sp. HK171 Isolate Unclassified
203 2837678835 Jiella endophytica CBS5Q-3 Isolate Unclassified
204 2839138175 Delftia acidovorans B15 Isolate Rhizosphere
205 2857537821 Achromobacter sp. R-71975 Isolate Unclassified
206 2887375801 Parapusillimonas sp. SGNA-6 Isolate Rhizosphere
207 2894023352 Diaphorobacter ruginosibacter DSM 27467 Isolate Nodule
208 2990196909 Pseudomonas mangrovi TC-11 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 95.49
Metatranscriptomes 0
Isolates 4.51

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.74
Nodule 1.23
Rhizoplane 3.69
Rhizosphere 83.2
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075366_10003976 3300006195 Bacteria 7895
2 JGI25152J39213_1010015 3300002773 Bacteria 2201
3 Ga0055531_10038621 3300003794 Bacteria 1430
4 Ga0070658_10038039 3300005327 Bacteria 3880
5 Ga0070676_10048986 3300005328 Bacteria 2471
6 Ga0070683_100008363 3300005329 Bacteria 8789
7 Ga0070683_100012103 3300005329 Bacteria 7486
8 Ga0070690_100006291 3300005330 Bacteria 6736
9 Ga0070690_100019173 3300005330 Bacteria 4146
10 Ga0070670_100056289 3300005331 Bacteria 3375
11 Ga0070666_10037986 3300005335 Bacteria 3203
12 Ga0068868_100006127 3300005338 Bacteria 8497
13 Ga0070691_10064587 3300005341 Bacteria 1766
14 Ga0070687_100015467 3300005343 Bacteria 3452
15 Ga0070692_10005748 3300005345 Bacteria 5327
16 Ga0070668_100050853 3300005347 Bacteria 3192
17 Ga0070671_100071475 3300005355 Bacteria 2896
18 Ga0070688_100053665 3300005365 Bacteria 2522
19 Ga0070659_100115720 3300005366 Bacteria 2167
20 Ga0070701_10008071 3300005438 Bacteria 4532
21 Ga0070700_100083020 3300005441 Bacteria 2073
22 Ga0070663_100008874 3300005455 Bacteria 6206
23 Ga0070678_100027010 3300005456 Bacteria 3890
24 Ga0070662_100036265 3300005457 Bacteria 3487
25 Ga0070685_10024393 3300005466 Bacteria 3321
26 Ga0070679_100058106 3300005530 Bacteria 3855
27 Ga0070684_100112529 3300005535 Bacteria 2442
28 Ga0070672_100050355 3300005543 Bacteria 3243
29 Ga0070686_100000971 3300005544 Bacteria 16531
30 Ga0070695_100043255 3300005545 Bacteria 2863
31 Ga0070696_100004952 3300005546 Bacteria 8891
32 Ga0070665_100005949 3300005548 Bacteria 12494
33 Ga0070704_100035888 3300005549 Bacteria 3373
34 Ga0070704_100038127 3300005549 Bacteria 3289
35 Ga0070704_100051395 3300005549 Bacteria 2902
36 Ga0068855_100003710 3300005563 Bacteria 18670
37 Ga0070664_100000031 3300005564 Bacteria 88513
38 Ga0068857_100042372 3300005577 Bacteria 4038
39 Ga0068854_100065520 3300005578 Bacteria 2641
40 Ga0068856_100006657 3300005614 Bacteria 11324
41 Ga0068866_10011337 3300005718 Bacteria 3854
42 Ga0068851_10001928 3300005834 Bacteria 9108
43 Ga0068862_100019925 3300005844 Bacteria 5600
44 Ga0068862_100053991 3300005844 Bacteria 3440
45 Ga0081538_10015619 3300005981 Bacteria 5867
46 Ga0081540_1009677 3300005983 Bacteria 6619
47 Ga0081540_1011639 3300005983 Bacteria 5866
48 Ga0075432_10002435 3300006058 Bacteria 6201
49 Ga0075366_10024606 3300006195 Bacteria 3511
50 Ga0075428_100001943 3300006844 Bacteria 22199
51 Ga0075431_100028792 3300006847 Bacteria 5711
52 Ga0075429_100119470 3300006880 Bacteria 2303
53 Ga0068865_100035367 3300006881 Bacteria 3358
54 Ga0079104_1000095 3300006946 Bacteria 129800
55 Ga0105250_10007892 3300009092 Bacteria 4548
56 Ga0105240_10000243 3300009093 Bacteria 107903
57 Ga0105240_10002245 3300009093 Bacteria 31383
58 Ga0105240_10062131 3300009093 Bacteria 4651
59 Ga0111539_10146278 3300009094 Bacteria 2767
60 Ga0105245_10004828 3300009098 Bacteria 11885
61 Ga0105245_10041215 3300009098 Bacteria 4116
62 Ga0105247_10001959 3300009101 Bacteria 14320
63 Ga0105243_10033024 3300009148 Bacteria 4000
64 Ga0105243_10127576 3300009148 Bacteria 2154
65 Ga0105248_10146056 3300009177 Bacteria 2669
66 Ga0105237_10044366 3300009545 Bacteria 4476
67 Ga0105238_10000349 3300009551 Bacteria 49771
68 Ga0105249_10142424 3300009553 Bacteria 2300
69 Ga0105239_10005753 3300010375 Bacteria 14465
70 Ga0105239_10051090 3300010375 Bacteria 4532
71 Ga0105246_10012100 3300011119 Bacteria 5376
72 Ga0105246_10021154 3300011119 Bacteria 4182
73 Ga0157373_10001682 3300013100 Bacteria 16885
74 Ga0157371_10004169 3300013102 Bacteria 12739
75 Ga0157371_10009146 3300013102 Bacteria 7825
76 Ga0157369_10045322 3300013105 Bacteria 4783
77 Ga0157374_10068566 3300013296 Bacteria 3337
78 Ga0157378_10048130 3300013297 Bacteria 3791
79 Ga0157372_10001256 3300013307 Bacteria 27447
80 Ga0157377_10022020 3300014745 Bacteria 3360
81 Ga0157376_10004223 3300014969 Bacteria 9965
82 Ga0163161_10051667 3300017792 Bacteria 2978
83 Ga0213872_10000120 3300021361 Bacteria 73389
84 Ga0213872_10001381 3300021361 Bacteria 15978
85 Ga0207425_1011270 3300025245 Bacteria 2139
86 Ga0209129_1000142 3300025258 Bacteria 116806
87 Ga0209233_1004000 3300025261 Bacteria 5108
88 Ga0209025_1013728 3300025294 Bacteria 5060
89 Ga0209257_1001023 3300025304 Bacteria 37638
90 Ga0207697_10001908 3300025315 Bacteria 11098
91 Ga0207682_10009970 3300025893 Bacteria 3732
92 Ga0207710_10032542 3300025900 Bacteria 2284
93 Ga0207688_10000008 3300025901 Bacteria 62580
94 Ga0207647_10001167 3300025904 Bacteria 20250
95 Ga0207645_10000916 3300025907 Bacteria 24507
96 Ga0207643_10000866 3300025908 Bacteria 18231
97 Ga0207705_10033683 3300025909 Bacteria 3660
98 Ga0207695_10002771 3300025913 Bacteria 25531
99 Ga0207695_10071068 3300025913 Bacteria 3555
100 Ga0207662_10000598 3300025918 Bacteria 16124
101 Ga0207657_10000094 3300025919 Bacteria 85112
102 Ga0207649_10017438 3300025920 Bacteria 4069
103 Ga0207649_10073854 3300025920 Bacteria 2186
104 Ga0207694_10044579 3300025924 Bacteria 3425
105 Ga0207650_10066047 3300025925 Bacteria 2712
106 Ga0207659_10044039 3300025926 Bacteria 3138
107 Ga0207687_10216433 3300025927 Bacteria 1506
108 Ga0207687_10218027 3300025927 Bacteria 1501
109 Ga0207644_10049443 3300025931 Bacteria 3010
110 Ga0207706_10000118 3300025933 Bacteria 84834
111 Ga0207686_10037395 3300025934 Bacteria 2929
112 Ga0207709_10000171 3300025935 Bacteria 86834
113 Ga0207709_10008983 3300025935 Bacteria 5511
114 Ga0207670_10024151 3300025936 Bacteria 3796
115 Ga0207691_10000074 3300025940 Bacteria 83272
116 Ga0207711_10002004 3300025941 Bacteria 18410
117 Ga0207689_10000093 3300025942 Bacteria 72709
118 Ga0207661_10040899 3300025944 Bacteria 3647
119 Ga0207661_10046897 3300025944 Bacteria 3428
120 Ga0207679_10000127 3300025945 Bacteria 62374
121 Ga0207679_10067234 3300025945 Bacteria 2688
122 Ga0207651_10002906 3300025960 Bacteria 8274
123 Ga0207658_10009719 3300025986 Bacteria 6531
124 Ga0207677_10001048 3300026023 Bacteria 15183
125 Ga0207703_10023002 3300026035 Bacteria 4893
126 Ga0207639_10278378 3300026041 Bacteria 1470
127 Ga0207678_10015357 3300026067 Bacteria 6736
128 Ga0207708_10004395 3300026075 Bacteria 10386
129 Ga0207641_10099885 3300026088 Bacteria 2554
130 Ga0207648_10002147 3300026089 Bacteria 21437
131 Ga0207676_10059722 3300026095 Bacteria 3012
132 Ga0207674_10003577 3300026116 Bacteria 18950
133 Ga0207674_10071496 3300026116 Bacteria 3486
134 Ga0207675_100000008 3300026118 Bacteria 182355
135 Ga0207683_10000629 3300026121 Bacteria 32310
136 Ga0209281_1000002 3300027111 Bacteria 1924012
137 Ga0268266_10002198 3300028379 Bacteria 21333
138 Ga0268264_10055684 3300028381 Bacteria 3305
139 Ga0265338_10000152 3300028800 Bacteria 126250
140 Ga0265328_10047707 3300031239 Bacteria 1574
141 Ga0265325_10003864 3300031241 Bacteria 9612
142 Ga0265339_10002518 3300031249 Bacteria 13082
143 Ga0265331_10039087 3300031250 Bacteria 2316
144 Ga0265327_10002869 3300031251 Bacteria 17351
145 Ga0265327_10006752 3300031251 Bacteria 9069
146 Ga0307408_100056674 3300031548 Bacteria 2842
147 Ga0265313_10000266 3300031595 Bacteria 57212
148 Ga0265314_10012241 3300031711 Bacteria 7019
149 Ga0265314_10038682 3300031711 Bacteria 3443
150 Ga0265314_10067396 3300031711 Bacteria 2411
151 Ga0307516_10000011 3300031730 Bacteria 224428
152 Ga0307412_10006185 3300031911 Bacteria 6750
153 Ga0373947_0035527 3300035725 Bacteria 2951
154 Ga0373937_0198617 3300036401 Bacteria 1885
155 Ga0395899_0095739 3300037312 Bacteria 2147
156 Ga0395900_0035944 3300037418 Bacteria 5105
157 Ga0395900_0267009 3300037418 Bacteria 1707
158 Ga0395898_0087879 3300037466 Bacteria 2994
159 Ga0395901_0015492 3300038443 Bacteria 7763
160 Ga0395901_0406622 3300038443 Bacteria 1398
161 Ga0436361_0097160 3300039447 Bacteria 66004
162 Ga0436361_1100106 3300039447 Bacteria 8789
163 Ga0451577_0190126 3300042876 Bacteria 1852
164 Ga0451577_0435689 3300042876 Bacteria 1190
165 Ga0453684_0064711 3300044712 Bacteria 4669
166 Ga0453684_0066441 3300044712 Bacteria 4592
167 Ga0451576_0031199 3300045051 Bacteria 5685
168 Ga0495591_023499 3300046458 Bacteria 1973
169 Ga0495629_0000310 3300046459 Bacteria 41782
170 Ga0495650_0000802 3300046471 Bacteria 38263
171 Ga0495650_0037948 3300046471 Bacteria 2091
172 Ga0495580_0002890 3300046472 Bacteria 14778
173 Ga0495582_0019651 3300046473 Bacteria 3694
174 Ga0495664_0144677 3300046477 Bacteria 1441
175 Ga0495594_0087889 3300046499 Bacteria 1740
176 Ga0495583_0043921 3300046506 Bacteria 2078
177 Ga0495606_0022567 3300046507 Bacteria 4581
178 Ga0495630_0009372 3300046517 Bacteria 7038
179 Ga0495643_0000019 3300046522 Bacteria 303627
180 Ga0495642_0001336 3300046528 Bacteria 11040
181 Ga0495665_0004402 3300046531 Bacteria 7606
182 Ga0495586_0191324 3300046535 Bacteria 1159
183 Ga0495645_0000185 3300046543 Bacteria 44326
184 Ga0495645_0070978 3300046543 Bacteria 2512
185 Ga0495633_0040387 3300046558 Bacteria 2223
186 Ga0495667_0020865 3300046559 Bacteria 4420
187 Ga0495667_0080185 3300046559 Bacteria 2122
188 Ga0495634_0151365 3300046642 Bacteria 1467
189 Ga0495635_0163654 3300046663 Bacteria 1514
190 Ga0495588_0059311 3300046674 Bacteria 1979
191 Ga0495588_0091269 3300046674 Bacteria 1596
192 Ga0495623_0030054 3300046679 Bacteria 3496
193 Ga0495646_0008071 3300046680 Bacteria 6690
194 Ga0495613_0015609 3300046689 Bacteria 5651
195 Ga0495589_0001314 3300046794 Bacteria 14592
196 Ga0495600_0050370 3300046809 Bacteria 2717
197 Ga0495581_0005450 3300047315 Bacteria 7360
198 Ga0495672_0012525 3300047320 Bacteria 5913
199 Ga0495680_0080478 3300047322 Bacteria 2462
200 Ga0495675_0025497 3300047444 Bacteria 3769
201 Ga0495685_023019 3300047447 Bacteria 2144
202 Ga0495681_0058943 3300047470 Bacteria 1777
203 Ga0495614_0017919 3300048089 Bacteria 3070
204 Ga0496101_0054462 3300048904 Bacteria 2888
205 Ga0496105_0092505 3300048908 Bacteria 2497
206 Ga0496106_0033965 3300048909 Bacteria 3808
207 Ga0496107_0081575 3300048910 Bacteria 2359
208 Ga0496109_0068895 3300048912 Bacteria 3243
209 Ga0496110_0148940 3300048913 Bacteria 2118
210 Ga0496111_0223750 3300048914 Bacteria 1398
211 Ga0496113_0238881 3300048916 Bacteria 1449
212 Ga0496115_0067166 3300048918 Bacteria 2899
213 Ga0496120_0021460 3300048923 Bacteria 4081
214 Ga0496121_0033694 3300048924 Bacteria 4629
215 Ga0496124_0027683 3300048927 Bacteria 5082
216 Ga0496125_0002258 3300048928 Bacteria 25570
217 Ga0496125_0008379 3300048928 Bacteria 10837
218 Ga0496126_0010740 3300048929 Bacteria 9562
219 Ga0501031_0226440 3300049568 Bacteria 1217
220 Ga0501034_0000243 3300049571 Bacteria 100637
221 Ga0501069_0149588 3300049585 Bacteria 1341
222 Ga0501071_0031191 3300049587 Bacteria 3776
223 Ga0501080_0085504 3300049742 Bacteria 2931
224 Ga0501081_0132038 3300049743 Bacteria 1785
225 nmdc:mga0k408_3844_c1 3300050493 Bacteria 7961
226 nmdc:mga0qj67_100395_c1 3300050509 Bacteria 2333
227 nmdc:mga08y16_256230_c1 3300050511 Bacteria 1807
228 Ga0495601_0011755 3300053077 Bacteria 5248
229 Ga0495619_0016269 3300053085 Bacteria 4708
230 Ga0500583_0025662 3300053092 Bacteria 2521
231 Ga0500641_0000927 3300053096 Bacteria 10472
232 Ga0500616_0000053 3300053153 Bacteria 291841
233 Ga0500616_0035955 3300053153 Bacteria 2691
234 2516020570 2515154189 Bacteria 9629850
235 2643752132 2643221546 Bacteria 2910897
236 2644124195 2643221621 Bacteria 6212786
237 2644303481 2643221654 Bacteria 5273570
238 2722886372 2721755523 Bacteria 6430384
239 2837679614 2837678835 Bacteria 5252418
240 2839142018 2839138175 Bacteria 6549354
241 2857540333 2857537821 Bacteria 5248181
242 2887380652 2887375801 Bacteria 5334027
243 2894027473 2894023352 Bacteria 5167372
244 2990197922 2990196909 Bacteria 4054280
245 Ga0075366_10003976
246 JGI25152J39213_1010015
247 Ga0055531_10038621
248 Ga0070658_10038039
249 Ga0070676_10048986
250 Ga0070683_100008363
251 Ga0070683_100012103
252 Ga0070690_100006291
253 Ga0070690_100019173
254 Ga0070670_100056289
255 Ga0070666_10037986
256 Ga0068868_100006127
257 Ga0070691_10064587
258 Ga0070687_100015467
259 Ga0070692_10005748
260 Ga0070668_100050853
261 Ga0070671_100071475
262 Ga0070688_100053665
263 Ga0070659_100115720
264 Ga0070701_10008071
265 Ga0070700_100083020
266 Ga0070663_100008874
267 Ga0070678_100027010
268 Ga0070662_100036265
269 Ga0070685_10024393
270 Ga0070679_100058106
271 Ga0070684_100112529
272 Ga0070672_100050355
273 Ga0070686_100000971
274 Ga0070695_100043255
275 Ga0070696_100004952
276 Ga0070665_100005949
277 Ga0070704_100035888
278 Ga0070704_100038127
279 Ga0070704_100051395
280 Ga0068855_100003710
281 Ga0070664_100000031
282 Ga0068857_100042372
283 Ga0068854_100065520
284 Ga0068856_100006657
285 Ga0068866_10011337
286 Ga0068851_10001928
287 Ga0068862_100019925
288 Ga0068862_100053991
289 Ga0081538_10015619
290 Ga0081540_1009677
291 Ga0081540_1011639
292 Ga0075432_10002435
293 Ga0075366_10024606
294 Ga0075428_100001943
295 Ga0075431_100028792
296 Ga0075429_100119470
297 Ga0068865_100035367
298 Ga0079104_1000095
299 Ga0105250_10007892
300 Ga0105240_10000243
301 Ga0105240_10002245
302 Ga0105240_10062131
303 Ga0111539_10146278
304 Ga0105245_10004828
305 Ga0105245_10041215
306 Ga0105247_10001959
307 Ga0105243_10033024
308 Ga0105243_10127576
309 Ga0105248_10146056
310 Ga0105237_10044366
311 Ga0105238_10000349
312 Ga0105249_10142424
313 Ga0105239_10005753
314 Ga0105239_10051090
315 Ga0105246_10012100
316 Ga0105246_10021154
317 Ga0157373_10001682
318 Ga0157371_10004169
319 Ga0157371_10009146
320 Ga0157369_10045322
321 Ga0157374_10068566
322 Ga0157378_10048130
323 Ga0157372_10001256
324 Ga0157377_10022020
325 Ga0157376_10004223
326 Ga0163161_10051667
327 Ga0213872_10000120
328 Ga0213872_10001381
329 Ga0207425_1011270
330 Ga0209129_1000142
331 Ga0209233_1004000
332 Ga0209025_1013728
333 Ga0209257_1001023
334 Ga0207697_10001908
335 Ga0207682_10009970
336 Ga0207710_10032542
337 Ga0207688_10000008
338 Ga0207647_10001167
339 Ga0207645_10000916
340 Ga0207643_10000866
341 Ga0207705_10033683
342 Ga0207695_10002771
343 Ga0207695_10071068
344 Ga0207662_10000598
345 Ga0207657_10000094
346 Ga0207649_10017438
347 Ga0207649_10073854
348 Ga0207694_10044579
349 Ga0207650_10066047
350 Ga0207659_10044039
351 Ga0207687_10216433
352 Ga0207687_10218027
353 Ga0207644_10049443
354 Ga0207706_10000118
355 Ga0207686_10037395
356 Ga0207709_10000171
357 Ga0207709_10008983
358 Ga0207670_10024151
359 Ga0207691_10000074
360 Ga0207711_10002004
361 Ga0207689_10000093
362 Ga0207661_10040899
363 Ga0207661_10046897
364 Ga0207679_10000127
365 Ga0207679_10067234
366 Ga0207651_10002906
367 Ga0207658_10009719
368 Ga0207677_10001048
369 Ga0207703_10023002
370 Ga0207639_10278378
371 Ga0207678_10015357
372 Ga0207708_10004395
373 Ga0207641_10099885
374 Ga0207648_10002147
375 Ga0207676_10059722
376 Ga0207674_10003577
377 Ga0207674_10071496
378 Ga0207675_100000008
379 Ga0207683_10000629
380 Ga0209281_1000002
381 Ga0268266_10002198
382 Ga0268264_10055684
383 Ga0265338_10000152
384 Ga0265328_10047707
385 Ga0265325_10003864
386 Ga0265339_10002518
387 Ga0265331_10039087
388 Ga0265327_10002869
389 Ga0265327_10006752
390 Ga0307408_100056674
391 Ga0265313_10000266
392 Ga0265314_10012241
393 Ga0265314_10038682
394 Ga0265314_10067396
395 Ga0307516_10000011
396 Ga0307412_10006185
397 Ga0373947_0035527
398 Ga0373937_0198617
399 Ga0395899_0095739
400 Ga0395900_0035944
401 Ga0395900_0267009
402 Ga0395898_0087879
403 Ga0395901_0015492
404 Ga0395901_0406622
405 Ga0436361_0097160
406 Ga0436361_1100106
407 Ga0451577_0190126
408 Ga0451577_0435689
409 Ga0453684_0064711
410 Ga0453684_0066441
411 Ga0451576_0031199
412 Ga0495591_023499
413 Ga0495629_0000310
414 Ga0495650_0000802
415 Ga0495650_0037948
416 Ga0495580_0002890
417 Ga0495582_0019651
418 Ga0495664_0144677
419 Ga0495594_0087889
420 Ga0495583_0043921
421 Ga0495606_0022567
422 Ga0495630_0009372
423 Ga0495643_0000019
424 Ga0495642_0001336
425 Ga0495665_0004402
426 Ga0495586_0191324
427 Ga0495645_0000185
428 Ga0495645_0070978
429 Ga0495633_0040387
430 Ga0495667_0020865
431 Ga0495667_0080185
432 Ga0495634_0151365
433 Ga0495635_0163654
434 Ga0495588_0059311
435 Ga0495588_0091269
436 Ga0495623_0030054
437 Ga0495646_0008071
438 Ga0495613_0015609
439 Ga0495589_0001314
440 Ga0495600_0050370
441 Ga0495581_0005450
442 Ga0495672_0012525
443 Ga0495680_0080478
444 Ga0495675_0025497
445 Ga0495685_023019
446 Ga0495681_0058943
447 Ga0495614_0017919
448 Ga0496101_0054462
449 Ga0496105_0092505
450 Ga0496106_0033965
451 Ga0496107_0081575
452 Ga0496109_0068895
453 Ga0496110_0148940
454 Ga0496111_0223750
455 Ga0496113_0238881
456 Ga0496115_0067166
457 Ga0496120_0021460
458 Ga0496121_0033694
459 Ga0496124_0027683
460 Ga0496125_0002258
461 Ga0496125_0008379
462 Ga0496126_0010740
463 Ga0501031_0226440
464 Ga0501034_0000243
465 Ga0501069_0149588
466 Ga0501071_0031191
467 Ga0501080_0085504
468 Ga0501081_0132038
469 nmdc:mga0k408_3844_c1
470 nmdc:mga0qj67_100395_c1
471 nmdc:mga08y16_256230_c1
472 Ga0495601_0011755
473 Ga0495619_0016269
474 Ga0500583_0025662
475 Ga0500641_0000927
476 Ga0500616_0000053
477 Ga0500616_0035955
478 2516020570
479 2643752132
480 2644124195
481 2644303481
482 2722886372
483 2837679614
484 2839142018
485 2857540333
486 2887380652
487 2894027473
488 2990197922

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02515

CoA_transf_3

CoA-transferase family III

24

401

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
5yit-assembly3.cif.gz_E-2 crystal structure of hypothetical protein (rv3272) from mycobacterium tuberculosis 0.9469 13 382
4hl6-assembly2.cif.gz_C yfde from escherichia coli 0.9459 13 389
5yit-assembly1.cif.gz_B crystal structure of hypothetical protein (rv3272) from mycobacterium tuberculosis 0.9449 13 384
5yit-assembly2.cif.gz_C crystal structure of hypothetical protein (rv3272) from mycobacterium tuberculosis 0.944 13 384
5yx6-assembly2.cif.gz_D crystal structure of rv3272 from m. tuberculosis orthorhombic form 0.9439 13 384
ID Description Score Start End Superfamily
4ed9A02 Alpha Beta;2-Layer Sandwich;formyl-coa transferase, domain 3;formyl-coa transferase, domain 3 0.987 234 325 3.30.1540.10
4hl6E02 Alpha Beta;2-Layer Sandwich;formyl-coa transferase, domain 3;formyl-coa transferase, domain 3 0.987 234 325 3.30.1540.10
af_Q4V9F2_1_227_3.40.50.10540 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Crotonobetainyl-coa:carnitine coa-transferase; domain 1 0.9824 34 244 3.40.50.10540
4ed9A02 Alpha Beta;2-Layer Sandwich;formyl-coa transferase, domain 3;formyl-coa transferase, domain 3 0.9765 234 325 3.30.1540.10
4hl6E02 Alpha Beta;2-Layer Sandwich;formyl-coa transferase, domain 3;formyl-coa transferase, domain 3 0.9765 234 325 3.30.1540.10
ID Description Score Start End GO Terms
AF-A0A7K2XNP4-F1-model_v4 CoA transferase 0.9849 17 341 GO:0008410
AF-A0A520F7E2-F1-model_v4 deleted 0.9826 10 318
AF-A0A0A7PLU8-F1-model_v4 L-carnitine dehydratase/bile acid-inducible protein F 0.9823 12 329 GO:0008410
AF-A0A3S2IGU5-F1-model_v4 deleted 0.9817 12 282
AF-A0A2H1JPH7-F1-model_v4 CoA-transferase family III 0.9792 13 128 GO:0008410

Map