F356396

General Info

Members Datasets Scaffolds Average Seq Length
244 168 235 370

Family's Representative Sequence

Representative Sequence 3300006846|Ga0075430_100000098|Ga0075430_1000000983
Length 406
Sequence MPLWVLDVQRTGNTGETSALTIHRGLKAELSSMIETIQAALARLRDFMEWAPGTVVGVVILAIAVVLALLLHSAVFKLLQRIVRRRHPFVVGVLTGTWRLGQIGFVVAALFIALPVAPFDRETTTVLAYVLLIAAIVLIGCTVITATHVMADLYLLRFRLDVADNLLARKHVTQIRVLRRVVDTLLIIVTIGAVLMTFEPVRQYGVSLFASAGVAGLVVGFAARPVLSNLIAGIQLAMTQPIRIDDAVLVENEFGNVEEITATYVVLRLWDLRRMIVPLTYFIEKPFQNWSRESTSLIGTVLLKADYTTPVERVRAKAEEIVKASPLWDGNLIKLQVTDSDAETMELRVIVTARSAGDAFDLRCELREKLIAYLQAELPGALPRRRQEASGAAAVAPPAPLDSKSR

Samples

Sample ID Description Type Environment
1 2643221547 Pseudolabrys sp. Root1462 Isolate Unclassified
2 2643221651 Afipia sp. Root123D2 Isolate Unclassified
3 2657244999 Sinorhizobium sojae CCBAU 05684 Isolate Unclassified
4 2671180139 Chelativorans sp. A52C2 Isolate Unclassified
5 2791355082 Ensifer alkalisoli YIC4027 Isolate Nodule
6 2802429268 Sinorhizobium sojae CCBAU 05684 Isolate Unclassified
7 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
8 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
9 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
10 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
11 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
12 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
15 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
20 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
21 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
22 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
23 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
24 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
25 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
26 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
27 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
28 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
29 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
30 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
31 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
32 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
33 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
34 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
35 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
36 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
37 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
38 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
39 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
41 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
42 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
45 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
46 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
47 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
48 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
49 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
50 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
51 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
52 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
53 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
54 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
55 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
56 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
73 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
74 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
75 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
76 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
77 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
78 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
79 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
80 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
81 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
82 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
83 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
84 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
85 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
86 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
87 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
88 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
89 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
90 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
91 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
92 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
93 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
94 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
95 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
96 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
97 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
98 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
99 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
100 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
101 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
102 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
103 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
104 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
105 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
106 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
107 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
108 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
109 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
110 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
111 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
112 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
113 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
114 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
115 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
116 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
117 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
118 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
119 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
120 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
121 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
122 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
123 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
124 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
125 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
126 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
127 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
128 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
129 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
134 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
140 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
141 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
142 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
143 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
144 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
145 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
146 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
147 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
148 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
149 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
150 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
151 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
152 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
153 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
154 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
155 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
156 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
157 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
158 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
159 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
160 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
161 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
162 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
163 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
164 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
165 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
166 8005658619 Rhizobium terrae CC-HIH110 Isolate Unclassified
167 8049293176 Ensifer alkalisoli YIC4027 Isolate Nodule
168 8055431914 Allorhizobium sonneratiae BGMRC 0089 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 95.9
Metatranscriptomes 0.41
Isolates 3.69

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.87
Nodule 0.82
Rhizoplane 6.15
Rhizosphere 85.66
Stem 0
Stem Tuber 0
Unclassified 4.51

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25405J52794_10011640 3300003911 Bacteria 1685
2 Ga0070658_10024275 3300005327 Bacteria 4865
3 Ga0070683_100238457 3300005329 Bacteria 1729
4 Ga0070680_100002793 3300005336 Bacteria 12969
5 Ga0070680_100009670 3300005336 Bacteria 7417
6 Ga0070661_100062980 3300005344 Bacteria 2723
7 Ga0070668_100217603 3300005347 Bacteria 1574
8 Ga0070659_100180060 3300005366 Bacteria 1734
9 Ga0070659_100181756 3300005366 Bacteria 1726
10 Ga0070714_100036747 3300005435 Bacteria 4110
11 Ga0070711_100099585 3300005439 Bacteria 2112
12 Ga0070681_10008939 3300005458 Bacteria 9850
13 Ga0070681_10009749 3300005458 Bacteria 9452
14 Ga0070679_100270229 3300005530 Bacteria 1654
15 Ga0070684_100289778 3300005535 Bacteria 1501
16 Ga0070672_100206102 3300005543 Bacteria 1646
17 Ga0070665_100029306 3300005548 Bacteria 5540
18 Ga0068855_100015616 3300005563 Bacteria 9137
19 Ga0068855_100026074 3300005563 Bacteria 6991
20 Ga0068855_100036837 3300005563 Bacteria 5819
21 Ga0068855_100186457 3300005563 Bacteria 2342
22 Ga0068855_100316251 3300005563 Bacteria 1727
23 Ga0070664_100066372 3300005564 Bacteria 3081
24 Ga0068856_100089378 3300005614 Bacteria 3063
25 Ga0068856_100109802 3300005614 Bacteria 2755
26 Ga0070702_100009938 3300005615 Bacteria 4672
27 Ga0068852_100106419 3300005616 Bacteria 2542
28 Ga0068852_100138683 3300005616 Bacteria 2248
29 Ga0068859_100073529 3300005617 Bacteria 3456
30 Ga0068851_10088069 3300005834 Bacteria 1631
31 Ga0068863_100347333 3300005841 Bacteria 1444
32 Ga0081455_10000338 3300005937 Bacteria 61504
33 Ga0081455_10013081 3300005937 Bacteria 8226
34 Ga0081455_10019426 3300005937 Bacteria 6429
35 Ga0081539_10009858 3300005985 Bacteria 7880
36 Ga0070717_10055523 3300006028 Bacteria 3268
37 Ga0070717_10129658 3300006028 Bacteria 2167
38 Ga0075363_100085893 3300006048 Bacteria 1727
39 Ga0075364_10146206 3300006051 Bacteria 1591
40 Ga0070715_10016080 3300006163 Bacteria 2804
41 Ga0070712_100081954 3300006175 Bacteria 2339
42 Ga0075430_100000098 3300006846 Bacteria 51603
43 Ga0075431_100079790 3300006847 Bacteria 3379
44 Ga0075434_100031085 3300006871 Bacteria 5263
45 Ga0097620_100073529 3300006931 Bacteria 3456
46 Ga0099795_10002933 3300007788 Bacteria 4133
47 Ga0105240_10041443 3300009093 Bacteria 5877
48 Ga0111539_10082573 3300009094 Bacteria 3779
49 Ga0114129_10128826 3300009147 Bacteria 3478
50 Ga0114129_10291302 3300009147 Bacteria 2178
51 Ga0105238_10255822 3300009551 Bacteria 1730
52 Ga0099796_10046287 3300010159 Bacteria 1493
53 Ga0105239_10258974 3300010375 Bacteria 1955
54 Ga0157373_10078116 3300013100 Bacteria 2334
55 Ga0157371_10026791 3300013102 Bacteria 4187
56 Ga0157370_10209481 3300013104 Bacteria 1807
57 Ga0157369_10040317 3300013105 Bacteria 5097
58 Ga0157372_10091049 3300013307 Bacteria 3469
59 Ga0157372_10230398 3300013307 Bacteria 2147
60 Ga0163163_10074870 3300014325 Bacteria 3379
61 Ga0206353_10389199 3300020082 Bacteria 1483
62 Ga0213875_10000025 3300021388 Bacteria 197787
63 Ga0209026_1001465 3300025250 Bacteria 10416
64 Ga0207705_10035157 3300025909 Bacteria 3584
65 Ga0207705_10097666 3300025909 Bacteria 2157
66 Ga0207707_10078946 3300025912 Bacteria 2874
67 Ga0207707_10123367 3300025912 Bacteria 2265
68 Ga0207695_10079988 3300025913 Bacteria 3311
69 Ga0207693_10020225 3300025915 Bacteria 5294
70 Ga0207660_10002013 3300025917 Bacteria 13517
71 Ga0207657_10031394 3300025919 Bacteria 4812
72 Ga0207652_10015469 3300025921 Bacteria 6202
73 Ga0207652_10311003 3300025921 Bacteria 1422
74 Ga0207664_10165064 3300025929 Bacteria 1891
75 Ga0207690_10011080 3300025932 Bacteria 5378
76 Ga0207706_10134819 3300025933 Bacteria 2172
77 Ga0207665_10027436 3300025939 Bacteria 3762
78 Ga0207661_10064988 3300025944 Bacteria 2960
79 Ga0207667_10088969 3300025949 Bacteria 3192
80 Ga0207667_10119751 3300025949 Bacteria 2713
81 Ga0207667_10155081 3300025949 Bacteria 2356
82 Ga0207639_10240918 3300026041 Bacteria 1572
83 Ga0207676_10150427 3300026095 Bacteria 2004
84 Ga0207698_10143678 3300026142 Bacteria 2060
85 Ga0207698_10181047 3300026142 Bacteria 1867
86 Ga0265325_10006936 3300031241 Bacteria 6835
87 Ga0265325_10025747 3300031241 Bacteria 3192
88 Ga0265339_10007481 3300031249 Bacteria 7056
89 Ga0265331_10019447 3300031250 Bacteria 3507
90 Ga0265316_10047682 3300031344 Bacteria 3388
91 Ga0265313_10004195 3300031595 Bacteria 11182
92 Ga0265313_10018348 3300031595 Bacteria 3931
93 Ga0316575_10033583 3300031665 Bacteria 2013
94 Ga0265314_10010135 3300031711 Bacteria 7896
95 Ga0265314_10089437 3300031711 Bacteria 2009
96 Ga0265342_10000093 3300031712 Bacteria 98424
97 Ga0265342_10002913 3300031712 Bacteria 14441
98 Ga0265342_10030650 3300031712 Bacteria 3331
99 Ga0316576_10029106 3300031727 Bacteria 3900
100 Ga0316576_10036024 3300031727 Bacteria 3535
101 Ga0316585_10035403 3300032137 Bacteria 1581
102 Ga0373940_0003335 3300035088 Bacteria 3265
103 Ga0373944_0001608 3300035089 Bacteria 5711
104 Ga0373944_0017295 3300035089 Bacteria 2045
105 Ga0373939_0001164 3300035114 Bacteria 6439
106 Ga0373945_0026132 3300035116 Bacteria 2033
107 Ga0373943_0020068 3300035170 Bacteria 3078
108 Ga0373943_0077814 3300035170 Bacteria 1694
109 Ga0373946_0040929 3300035171 Bacteria 1898
110 Ga0316574_0040640 3300035398 Bacteria 2864
111 Ga0373931_0134502 3300035691 Bacteria 1426
112 Ga0373927_0012580 3300035695 Bacteria 5632
113 Ga0373927_0028908 3300035695 Bacteria 3614
114 Ga0373927_0043708 3300035695 Bacteria 2900
115 Ga0373947_0045182 3300035725 Bacteria 2635
116 Ga0373937_0001231 3300036401 Bacteria 21521
117 Ga0316584_0176124 3300036712 Bacteria 1584
118 Ga0373925_0017506 3300037068 Bacteria 5195
119 Ga0373925_0088007 3300037068 Bacteria 2371
120 Ga0373925_0180625 3300037068 Bacteria 1670
121 Ga0373925_0253435 3300037068 Bacteria 1412
122 Ga0395899_0008011 3300037312 Bacteria 8137
123 Ga0395899_0033553 3300037312 Bacteria 3854
124 Ga0395900_0023645 3300037418 Bacteria 6286
125 Ga0395900_0055376 3300037418 Bacteria 4084
126 Ga0395900_0092426 3300037418 Bacteria 3109
127 Ga0395900_0187780 3300037418 Bacteria 2097
128 Ga0395898_0032587 3300037466 Bacteria 5202
129 Ga0395898_0040381 3300037466 Bacteria 4614
130 Ga0395898_0115793 3300037466 Bacteria 2568
131 Ga0316581_0002878 3300037588 Bacteria 4212
132 Ga0436364_1209910 3300037853 Bacteria 45322
133 Ga0395901_0004863 3300038443 Bacteria 13559
134 Ga0395901_0038038 3300038443 Bacteria 4977
135 Ga0395901_0042027 3300038443 Bacteria 4738
136 Ga0436365_0883310 3300039437 Bacteria 5679
137 Ga0436360_1304235 3300039438 Bacteria 26564
138 Ga0436361_0637521 3300039447 Bacteria 7745
139 Ga0436361_1211074 3300039447 Bacteria 4989
140 Ga0495603_0003024 3300046455 Bacteria 9963
141 Ga0495629_0000418 3300046459 Bacteria 35673
142 Ga0495582_0005066 3300046473 Bacteria 7380
143 Ga0495663_0020997 3300046525 Bacteria 1878
144 Ga0495659_0024926 3300046664 Bacteria 2044
145 Ga0495659_0026668 3300046664 Bacteria 1988
146 Ga0495647_0010352 3300046681 Bacteria 3173
147 Ga0495658_0001656 3300046683 Bacteria 11585
148 Ga0495658_0020990 3300046683 Bacteria 3437
149 Ga0495613_0041889 3300046689 Bacteria 3389
150 Ga0495670_0052331 3300046691 Bacteria 2044
151 Ga0495674_0087966 3300047319 Bacteria 2658
152 Ga0495672_0044293 3300047320 Bacteria 2670
153 Ga0495676_0072003 3300047321 Bacteria 2655
154 Ga0495676_0091651 3300047321 Bacteria 2271
155 Ga0495686_0153387 3300047472 Unclassified 1351
156 Ga0495593_0015476 3300047673 Bacteria 4319
157 Ga0496102_0250078 3300048905 Bacteria 1671
158 Ga0496104_0000922 3300048907 Bacteria 25212
159 Ga0496104_0002867 3300048907 Bacteria 14866
160 Ga0496104_0017234 3300048907 Bacteria 6573
161 Ga0496105_0010204 3300048908 Bacteria 7382
162 Ga0496105_0025294 3300048908 Bacteria 4831
163 Ga0496105_0160056 3300048908 Bacteria 1848
164 Ga0496108_0033529 3300048911 Bacteria 4265
165 Ga0496109_0001368 3300048912 Bacteria 20218
166 Ga0496109_0287950 3300048912 Bacteria 1548
167 Ga0496110_0332317 3300048913 Bacteria 1384
168 Ga0496111_0065739 3300048914 Bacteria 2632
169 Ga0496112_0004407 3300048915 Bacteria 11912
170 Ga0496113_0039599 3300048916 Bacteria 3469
171 Ga0496115_0029266 3300048918 Bacteria 4325
172 Ga0501033_0025151 3300049570 Bacteria 4485
173 Ga0501034_0000211 3300049571 Bacteria 110858
174 Ga0501034_0002288 3300049571 Bacteria 23510
175 Ga0501034_0012341 3300049571 Bacteria 8827
176 Ga0501034_0094784 3300049571 Bacteria 2981
177 Ga0501034_0138624 3300049571 Bacteria 2413
178 Ga0501036_0000877 3300049572 Bacteria 22422
179 Ga0501036_0053460 3300049572 Bacteria 3420
180 Ga0501037_0074745 3300049573 Bacteria 2462
181 Ga0501038_0022834 3300049574 Bacteria 5600
182 Ga0501038_0130750 3300049574 Bacteria 2061
183 Ga0501039_0014405 3300049575 Bacteria 6055
184 Ga0501039_0035132 3300049575 Bacteria 3868
185 Ga0501040_0078664 3300049576 Bacteria 2282
186 Ga0501042_0033605 3300049578 Bacteria 3636
187 Ga0501043_0003976 3300049579 Bacteria 12107
188 Ga0501043_0150851 3300049579 Bacteria 1819
189 Ga0501047_0000010 3300049581 Bacteria 429357
190 Ga0501047_0035898 3300049581 Bacteria 4789
191 Ga0501047_0149783 3300049581 Bacteria 2210
192 Ga0501048_0000498 3300049582 Bacteria 27484
193 Ga0501048_0014995 3300049582 Bacteria 5730
194 Ga0501067_0007084 3300049583 Bacteria 6228
195 Ga0501068_0027358 3300049584 Bacteria 3366
196 Ga0501068_0068548 3300049584 Bacteria 2162
197 Ga0501069_0026319 3300049585 Bacteria 3184
198 Ga0501070_0067747 3300049586 Bacteria 2956
199 Ga0501070_0181464 3300049586 Bacteria 1732
200 Ga0501070_0188393 3300049586 Bacteria 1696
201 Ga0501070_0270555 3300049586 Bacteria 1387
202 Ga0501071_0190421 3300049587 Bacteria 1538
203 Ga0501072_0012677 3300049588 Bacteria 6446
204 Ga0501072_0025513 3300049588 Bacteria 4603
205 Ga0501074_0034607 3300049590 Bacteria 3661
206 Ga0501075_0021490 3300049591 Bacteria 4706
207 Ga0501075_0253059 3300049591 Bacteria 1343
208 Ga0501076_0028137 3300049592 Bacteria 4363
209 Ga0501079_0177976 3300049741 Bacteria 1659
210 Ga0501080_0000641 3300049742 Bacteria 27751
211 Ga0501080_0077971 3300049742 Bacteria 3081
212 Ga0501080_0345485 3300049742 Bacteria 1344
213 Ga0501081_0010696 3300049743 Bacteria 5994
214 Ga0501083_0022116 3300049744 Bacteria 4413
215 Ga0501035_0209608 3300049822 Bacteria 1668
216 Ga0501044_0027879 3300049823 Bacteria 5961
217 Ga0501044_0072056 3300049823 Bacteria 3513
218 nmdc:mga03n38_130486_c1 3300050490 Bacteria 1245
219 nmdc:mga05p37_57268_c1 3300050507 Bacteria 4800
220 nmdc:mga0qj67_41_c1 3300050509 Bacteria 89688
221 nmdc:mga08y16_180579_c1 3300050511 Bacteria 2191
222 nmdc:mga08y16_50957_c1 3300050511 Bacteria 4331
223 nmdc:mga0n895_104973_c1 3300050512 Bacteria 2838
224 nmdc:mga0n895_23168_c1 3300050512 Bacteria 5832
225 nmdc:mga0n895_42232_c1 3300050512 Bacteria 4436
226 nmdc:mga0rr50_234694_c1 3300050513 Bacteria 1519
227 Ga0495619_0012901 3300053085 Bacteria 5263
228 Ga0500568_0033040 3300053139 Bacteria 2125
229 Ga0500616_0000325 3300053153 Bacteria 68300
230 Ga0500616_0046911 3300053153 Bacteria 2295
231 Ga0500616_0086546 3300053153 Bacteria 1562
232 Ga0501084_0012476 3300054114 Bacteria 7041
233 Ga0501084_0062095 3300054114 Bacteria 3128
234 Ga0501082_0097682 3300060353 Bacteria 2539
235 Ga0530510_0031563 3300061734 Bacteria 3809

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300049586 Ga0501070_0181464 Ga0501070_0181464_751_1671 288
2 3300036712 Ga0316584_0176124 Ga0316584_0176124_24_938 290
3 3300021388 Ga0213875_10000025 Ga0213875_10000025122 309
4 3300037853 Ga0436364_1209910 Ga0436364_1209910_22047_23225 309
5 3300031711 Ga0265314_10010135 Ga0265314_100101356 316
6 3300046664 Ga0495659_0024926 Ga0495659_0024926_312_1424 318
7 3300050490 nmdc:mga03n38_130486_c1 nmdc:mga03n38_130486_c1_10_1047 322
8 3300005563 Ga0068855_100026074 Ga0068855_1000260741 323
9 3300035114 Ga0373939_0001164 Ga0373939_0001164_272_1408 324
10 3300049575 Ga0501039_0035132 Ga0501039_0035132_2724_3803 325
11 3300049584 Ga0501068_0068548 Ga0501068_0068548_964_2043 325
12 3300049587 Ga0501071_0190421 Ga0501071_0190421_344_1423 325
13 3300049588 Ga0501072_0012677 Ga0501072_0012677_5285_6364 325
14 3300049592 Ga0501076_0028137 Ga0501076_0028137_3157_4236 325
15 3300049741 Ga0501079_0177976 Ga0501079_0177976_477_1556 325
16 3300049742 Ga0501080_0345485 Ga0501080_0345485_137_1216 325
17 3300054114 Ga0501084_0062095 Ga0501084_0062095_1313_2392 325
18 3300060353 Ga0501082_0097682 Ga0501082_0097682_133_1212 325
19 3300061734 Ga0530510_0031563 Ga0530510_0031563_359_1438 325
20 3300005937 Ga0081455_10013081 Ga0081455_100130816 326
21 3300053139 Ga0500568_0033040 Ga0500568_0033040_624_1769 326
22 3300005336 Ga0070680_100002793 Ga0070680_1000027932 328
23 3300005530 Ga0070679_100270229 Ga0070679_1002702291 328
24 3300005563 Ga0068855_100186457 Ga0068855_1001864572 328
25 3300005616 Ga0068852_100106419 Ga0068852_1001064191 328
26 3300025909 Ga0207705_10097666 Ga0207705_100976661 328
27 3300025912 Ga0207707_10123367 Ga0207707_101233673 328
28 3300025949 Ga0207667_10119751 Ga0207667_101197511 328
29 3300031595 Ga0265313_10018348 Ga0265313_100183481 328
30 3300031712 Ga0265342_10002913 Ga0265342_100029132 328
31 3300049591 Ga0501075_0253059 Ga0501075_0253059_242_1318 328
32 3300005563 Ga0068855_100036837 Ga0068855_1000368372 329
33 3300005834 Ga0068851_10088069 Ga0068851_100880692 329
34 3300005937 Ga0081455_10019426 Ga0081455_100194264 329
35 3300009551 Ga0105238_10255822 Ga0105238_102558221 329
36 3300049591 Ga0501075_0021490 Ga0501075_0021490_1973_3103 329
37 3300049743 Ga0501081_0010696 Ga0501081_0010696_207_1337 329
38 3300054114 Ga0501084_0012476 Ga0501084_0012476_4382_5512 329
39 3300005439 Ga0070711_100099585 Ga0070711_1000995852 330
40 3300005563 Ga0068855_100316251 Ga0068855_1003162512 330
41 3300005616 Ga0068852_100138683 Ga0068852_1001386833 330
42 3300009147 Ga0114129_10291302 Ga0114129_102913022 330
43 3300025929 Ga0207664_10165064 Ga0207664_101650641 330
44 3300025949 Ga0207667_10155081 Ga0207667_101550812 330
45 3300026142 Ga0207698_10181047 Ga0207698_101810472 330
46 3300048907 Ga0496104_0017234 Ga0496104_0017234_1525_2649 330
47 3300048908 Ga0496105_0010204 Ga0496105_0010204_2074_3198 330
48 3300048918 Ga0496115_0029266 Ga0496115_0029266_2642_3766 330
49 3300005614 Ga0068856_100089378 Ga0068856_1000893784 332
50 3300013100 Ga0157373_10078116 Ga0157373_100781163 332
51 3300013105 Ga0157369_10040317 Ga0157369_100403174 332
52 3300036401 Ga0373937_0001231 Ga0373937_0001231_1389_2522 332
53 3300037068 Ga0373925_0253435 Ga0373925_0253435_79_1212 332
54 3300037418 Ga0395900_0055376 Ga0395900_0055376_2346_3500 332
55 3300037466 Ga0395898_0032587 Ga0395898_0032587_3466_4620 332
56 3300038443 Ga0395901_0042027 Ga0395901_0042027_341_1495 332
57 3300013307 Ga0157372_10230398 Ga0157372_102303982 334
58 3300035695 Ga0373927_0043708 Ga0373927_0043708_1402_2523 334
59 3300037068 Ga0373925_0180625 Ga0373925_0180625_160_1281 334
60 3300037312 Ga0395899_0033553 Ga0395899_0033553_1870_3033 334
61 3300037418 Ga0395900_0187780 Ga0395900_0187780_923_2086 334
62 3300037466 Ga0395898_0115793 Ga0395898_0115793_1086_2249 334
63 3300013104 Ga0157370_10209481 Ga0157370_102094812 335
64 3300005614 Ga0068856_100109802 Ga0068856_1001098022 337
65 3300009093 Ga0105240_10041443 Ga0105240_100414432 337
66 3300013102 Ga0157371_10026791 Ga0157371_100267912 337
67 3300020082 Ga0206353_10389199 Ga0206353_103891992 337
68 3300025913 Ga0207695_10079988 Ga0207695_100799883 337
69 3300025921 Ga0207652_10311003 Ga0207652_103110032 337
70 3300006871 Ga0075434_100031085 Ga0075434_1000310856 338
71 3300048907 Ga0496104_0000922 Ga0496104_0000922_1524_2660 338
72 3300005985 Ga0081539_10009858 Ga0081539_100098584 339
73 3300009094 Ga0111539_10082573 Ga0111539_100825734 339
74 3300050511 nmdc:mga08y16_50957_c1 nmdc:mga08y16_50957_c1_559_1671 339
75 3300050512 nmdc:mga0n895_42232_c1 nmdc:mga0n895_42232_c1_2425_3537 339
76 3300006847 Ga0075431_100079790 Ga0075431_1000797903 340
77 3300031665 Ga0316575_10033583 Ga0316575_100335832 340
78 3300031727 Ga0316576_10029106 Ga0316576_100291062 340
79 3300032137 Ga0316585_10035403 Ga0316585_100354032 340
80 3300035398 Ga0316574_0040640 Ga0316574_0040640_315_1439 340
81 3300037588 Ga0316581_0002878 Ga0316581_0002878_354_1478 340
82 3300006028 Ga0070717_10129658 Ga0070717_101296581 341
83 3300031727 Ga0316576_10036024 Ga0316576_100360243 341
84 3300037418 Ga0395900_0092426 Ga0395900_0092426_1810_2964 341
85 3300039438 Ga0436360_1304235 Ga0436360_1304235_20204_21319 341
86 3300039447 Ga0436361_0637521 Ga0436361_0637521_2520_3635 341
87 3300046525 Ga0495663_0020997 Ga0495663_0020997_412_1590 342
88 3300046691 Ga0495670_0052331 Ga0495670_0052331_774_1952 342
89 3300031241 Ga0265325_10025747 Ga0265325_100257473 343
90 3300038443 Ga0395901_0004863 Ga0395901_0004863_2139_3254 343
91 3300035695 Ga0373927_0028908 Ga0373927_0028908_2448_3569 344
92 iso_pu_bacteria 2657244999 2657684649 344
93 iso_pu_bacteria 2802429268 2804754261 344
94 3300005329 Ga0070683_100238457 Ga0070683_1002384572 345
95 3300005344 Ga0070661_100062980 Ga0070661_1000629802 345
96 3300005366 Ga0070659_100180060 Ga0070659_1001800602 345
97 3300005535 Ga0070684_100289778 Ga0070684_1002897781 345
98 3300005548 Ga0070665_100029306 Ga0070665_1000293065 345
99 3300005564 Ga0070664_100066372 Ga0070664_1000663722 345
100 3300013307 Ga0157372_10091049 Ga0157372_100910493 345
101 3300025944 Ga0207661_10064988 Ga0207661_100649882 345
102 3300026142 Ga0207698_10143678 Ga0207698_101436782 345
103 3300037312 Ga0395899_0008011 Ga0395899_0008011_323_1429 345
104 3300037418 Ga0395900_0023645 Ga0395900_0023645_4061_5167 345
105 3300037466 Ga0395898_0040381 Ga0395898_0040381_753_1859 345
106 3300038443 Ga0395901_0038038 Ga0395901_0038038_1198_2304 345
107 3300046664 Ga0495659_0026668 Ga0495659_0026668_252_1481 345
108 3300049571 Ga0501034_0002288 Ga0501034_0002288_22325_23431 345
109 iso_pu_bacteria 2643221547 2643755940 345
110 3300006163 Ga0070715_10016080 Ga0070715_100160801 346
111 3300049570 Ga0501033_0025151 Ga0501033_0025151_448_1536 346
112 3300049572 Ga0501036_0053460 Ga0501036_0053460_835_1923 346
113 3300049586 Ga0501070_0188393 Ga0501070_0188393_353_1441 346
114 3300005347 Ga0070668_100217603 Ga0070668_1002176031 347
115 3300005615 Ga0070702_100009938 Ga0070702_1000099383 347
116 3300005617 Ga0068859_100073529 Ga0068859_1000735293 347
117 3300005841 Ga0068863_100347333 Ga0068863_1003473331 347
118 3300006175 Ga0070712_100081954 Ga0070712_1000819542 347
119 3300006931 Ga0097620_100073529 Ga0097620_1000735293 347
120 3300009147 Ga0114129_10128826 Ga0114129_101288261 347
121 3300014325 Ga0163163_10074870 Ga0163163_100748701 347
122 3300025915 Ga0207693_10020225 Ga0207693_100202255 347
123 3300025933 Ga0207706_10134819 Ga0207706_101348191 347
124 3300026095 Ga0207676_10150427 Ga0207676_101504271 347
125 3300039437 Ga0436365_0883310 Ga0436365_0883310_2142_3299 347
126 3300047320 Ga0495672_0044293 Ga0495672_0044293_1001_2140 347
127 3300047472 Ga0495686_0153387 Ga0495686_0153387_10_1146 347
128 3300048905 Ga0496102_0250078 Ga0496102_0250078_244_1383 347
129 3300048907 Ga0496104_0002867 Ga0496104_0002867_12379_13518 347
130 3300048908 Ga0496105_0025294 Ga0496105_0025294_3485_4624 347
131 3300048911 Ga0496108_0033529 Ga0496108_0033529_957_2096 347
132 3300048912 Ga0496109_0001368 Ga0496109_0001368_8120_9259 347
133 3300048913 Ga0496110_0332317 Ga0496110_0332317_207_1346 347
134 3300048914 Ga0496111_0065739 Ga0496111_0065739_1346_2485 347
135 3300048915 Ga0496112_0004407 Ga0496112_0004407_1276_2415 347
136 3300048916 Ga0496113_0039599 Ga0496113_0039599_1562_2701 347
137 3300049571 Ga0501034_0138624 Ga0501034_0138624_54_1193 347
138 3300049574 Ga0501038_0022834 Ga0501038_0022834_4185_5324 347
139 3300049579 Ga0501043_0150851 Ga0501043_0150851_204_1343 347
140 3300049581 Ga0501047_0035898 Ga0501047_0035898_1778_2917 347
141 3300050507 nmdc:mga05p37_57268_c1 nmdc:mga05p37_57268_c1_321_1460 347
142 3300050512 nmdc:mga0n895_23168_c1 nmdc:mga0n895_23168_c1_3133_4272 347
143 iso_pu_bacteria 2791355082 2792581067 347
144 iso_pu_bacteria 8049293176 8049298455 347
145 3300007788 Ga0099795_10002933 Ga0099795_100029332 348
146 3300010159 Ga0099796_10046287 Ga0099796_100462871 348
147 3300049571 Ga0501034_0012341 Ga0501034_0012341_6285_7400 348
148 3300050511 nmdc:mga08y16_180579_c1 nmdc:mga08y16_180579_c1_350_1507 348
149 3300006051 Ga0075364_10146206 Ga0075364_101462061 349
150 3300047319 Ga0495674_0087966 Ga0495674_0087966_1197_2354 349
151 iso_pu_bacteria 2643221651 2644288694 349
152 iso_pu_bacteria 8005658619 8005662286 349
153 3300005327 Ga0070658_10024275 Ga0070658_100242754 350
154 3300005336 Ga0070680_100009670 Ga0070680_1000096707 350
155 3300005366 Ga0070659_100181756 Ga0070659_1001817562 350
156 3300005458 Ga0070681_10009749 Ga0070681_100097498 350
157 3300005563 Ga0068855_100015616 Ga0068855_1000156163 350
158 3300006048 Ga0075363_100085893 Ga0075363_1000858932 350
159 3300025250 Ga0209026_1001465 Ga0209026_10014655 350
160 3300025909 Ga0207705_10035157 Ga0207705_100351572 350
161 3300025912 Ga0207707_10078946 Ga0207707_100789462 350
162 3300025917 Ga0207660_10002013 Ga0207660_100020138 350
163 3300025919 Ga0207657_10031394 Ga0207657_100313942 350
164 3300025921 Ga0207652_10015469 Ga0207652_100154695 350
165 3300025932 Ga0207690_10011080 Ga0207690_100110802 350
166 3300025949 Ga0207667_10088969 Ga0207667_100889692 350
167 3300026041 Ga0207639_10240918 Ga0207639_102409181 350
168 3300039447 Ga0436361_1211074 Ga0436361_1211074_46_1185 350
169 3300053153 Ga0500616_0000325 Ga0500616_0000325_24074_25219 350
170 iso_pu_bacteria 2671180139 2671692099 350
171 iso_pu_bacteria 8055431914 8055432049 350
172 3300005435 Ga0070714_100036747 Ga0070714_1000367474 351
173 3300005543 Ga0070672_100206102 Ga0070672_1002061022 351
174 3300006028 Ga0070717_10055523 Ga0070717_100555234 351
175 3300010375 Ga0105239_10258974 Ga0105239_102589741 351
176 3300025939 Ga0207665_10027436 Ga0207665_100274363 351
177 3300031241 Ga0265325_10006936 Ga0265325_100069363 351
178 3300031344 Ga0265316_10047682 Ga0265316_100476824 351
179 3300031595 Ga0265313_10004195 Ga0265313_100041959 351
180 3300035088 Ga0373940_0003335 Ga0373940_0003335_449_1594 351
181 3300035089 Ga0373944_0017295 Ga0373944_0017295_678_1823 351
182 3300035116 Ga0373945_0026132 Ga0373945_0026132_778_1923 351
183 3300035170 Ga0373943_0020068 Ga0373943_0020068_1329_2474 351
184 3300035691 Ga0373931_0134502 Ga0373931_0134502_150_1295 351
185 3300035725 Ga0373947_0045182 Ga0373947_0045182_1280_2425 351
186 3300037068 Ga0373925_0088007 Ga0373925_0088007_201_1346 351
187 3300046455 Ga0495603_0003024 Ga0495603_0003024_3189_4334 351
188 3300046459 Ga0495629_0000418 Ga0495629_0000418_22406_23551 351
189 3300046473 Ga0495582_0005066 Ga0495582_0005066_4650_5795 351
190 3300046681 Ga0495647_0010352 Ga0495647_0010352_1333_2478 351
191 3300046683 Ga0495658_0001656 Ga0495658_0001656_847_1992 351
192 3300046689 Ga0495613_0041889 Ga0495613_0041889_68_1213 351
193 3300047321 Ga0495676_0091651 Ga0495676_0091651_1056_2201 351
194 3300047673 Ga0495593_0015476 Ga0495593_0015476_801_1946 351
195 3300048908 Ga0496105_0160056 Ga0496105_0160056_477_1622 351
196 3300048912 Ga0496109_0287950 Ga0496109_0287950_155_1300 351
197 3300049571 Ga0501034_0000211 Ga0501034_0000211_108090_109223 351
198 3300049581 Ga0501047_0149783 Ga0501047_0149783_692_1825 351
199 3300050512 nmdc:mga0n895_104973_c1 nmdc:mga0n895_104973_c1_299_1444 351
200 3300050513 nmdc:mga0rr50_234694_c1 nmdc:mga0rr50_234694_c1_187_1332 351
201 3300053085 Ga0495619_0012901 Ga0495619_0012901_740_1885 351
202 3300053153 Ga0500616_0046911 Ga0500616_0046911_922_2064 351
203 3300005458 Ga0070681_10008939 Ga0070681_100089392 352
204 3300006846 Ga0075430_100000098 Ga0075430_1000000983 352
205 3300031249 Ga0265339_10007481 Ga0265339_100074816 352
206 3300031250 Ga0265331_10019447 Ga0265331_100194473 352
207 3300031711 Ga0265314_10089437 Ga0265314_100894373 352
208 3300031712 Ga0265342_10000093 Ga0265342_1000009363 352
209 3300031712 Ga0265342_10030650 Ga0265342_100306501 352
210 3300046683 Ga0495658_0020990 Ga0495658_0020990_175_1341 352
211 3300049571 Ga0501034_0094784 Ga0501034_0094784_1799_2944 352
212 3300049572 Ga0501036_0000877 Ga0501036_0000877_16561_17706 352
213 3300049573 Ga0501037_0074745 Ga0501037_0074745_105_1250 352
214 3300049574 Ga0501038_0130750 Ga0501038_0130750_152_1297 352
215 3300049575 Ga0501039_0014405 Ga0501039_0014405_4641_5786 352
216 3300049576 Ga0501040_0078664 Ga0501040_0078664_224_1369 352
217 3300049578 Ga0501042_0033605 Ga0501042_0033605_267_1412 352
218 3300049579 Ga0501043_0003976 Ga0501043_0003976_9402_10547 352
219 3300049581 Ga0501047_0000010 Ga0501047_0000010_296686_297831 352
220 3300049582 Ga0501048_0000498 Ga0501048_0000498_6870_8015 352
221 3300049582 Ga0501048_0014995 Ga0501048_0014995_1700_2845 352
222 3300049583 Ga0501067_0007084 Ga0501067_0007084_4000_5145 352
223 3300049584 Ga0501068_0027358 Ga0501068_0027358_154_1299 352
224 3300049585 Ga0501069_0026319 Ga0501069_0026319_1916_3061 352
225 3300049586 Ga0501070_0067747 Ga0501070_0067747_1132_2277 352
226 3300049586 Ga0501070_0270555 Ga0501070_0270555_152_1297 352
227 3300049588 Ga0501072_0025513 Ga0501072_0025513_402_1547 352
228 3300049590 Ga0501074_0034607 Ga0501074_0034607_299_1444 352
229 3300049742 Ga0501080_0000641 Ga0501080_0000641_2242_3387 352
230 3300049742 Ga0501080_0077971 Ga0501080_0077971_403_1548 352
231 3300049744 Ga0501083_0022116 Ga0501083_0022116_984_2129 352
232 3300049822 Ga0501035_0209608 Ga0501035_0209608_485_1630 352
233 3300049823 Ga0501044_0027879 Ga0501044_0027879_1950_3095 352
234 3300049823 Ga0501044_0072056 Ga0501044_0072056_47_1192 352
235 3300050509 nmdc:mga0qj67_41_c1 nmdc:mga0qj67_41_c1_48758_49978 352
236 3300053153 Ga0500616_0086546 Ga0500616_0086546_232_1386 353
237 3300003911 JGI25405J52794_10011640 JGI25405J52794_100116401 355
238 3300005937 Ga0081455_10000338 Ga0081455_1000033823 355
239 3300035089 Ga0373944_0001608 Ga0373944_0001608_2694_3908 355
240 3300035170 Ga0373943_0077814 Ga0373943_0077814_211_1425 355
241 3300035171 Ga0373946_0040929 Ga0373946_0040929_300_1514 355
242 3300035695 Ga0373927_0012580 Ga0373927_0012580_72_1286 355
243 3300037068 Ga0373925_0017506 Ga0373925_0017506_3834_5048 355
244 3300047321 Ga0495676_0072003 Ga0495676_0072003_723_1937 355

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00924

MS_channel_2nd

Mechanosensitive ion channel, beta-domain

225

292

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
6l3g-assembly1.cif.gz_B-2 structural basis for dna unwinding at forked dsdna by two coordinating pif1 helicases 0.8914 192 228
4v42-assembly1.cif.gz_BD crystal structure of the ribosome at 5.5 a resolution. 0.8435 192 229
7oib-assembly1.cif.gz_D cryo-em structure of late human 39s mitoribosome assembly intermediates, state 3d 0.8312 203 230
1kqs-assembly1.cif.gz_A the haloarcula marismortui 50s complexed with a pretranslocational intermediate in protein synthesis 0.8228 192 229
7po4-assembly1.cif.gz_D assembly intermediate of human mitochondrial ribosome large subunit (largely unfolded rrna with malsu1, l0r8f8 and acp) 0.8131 194 230
ID Description Score Start End Superfamily
af_P77338_945_994_2.30.30.60 Mainly Beta;Roll;SH3 type barrels.; 0.9587 191 240 2.30.30.60
af_A0A0R0ELK1_770_819_2.30.30.60 Mainly Beta;Roll;SH3 type barrels.; 0.9555 191 240 2.30.30.60
af_P0AAT4_202_252_2.30.30.60 Mainly Beta;Roll;SH3 type barrels.; 0.9477 192 240 2.30.30.60
af_P77338_945_994_2.30.30.60 Mainly Beta;Roll;SH3 type barrels.; 0.9407 191 240 2.30.30.60
af_Q54ZV3_691_741_2.30.30.60 Mainly Beta;Roll;SH3 type barrels.; 0.9381 191 239 2.30.30.60
ID Description Score Start End GO Terms
AF-A0A455U548-F1-model_v4 Cation efflux protein cytoplasmic domain-containing protein 0.9278 243 333
AF-A0A4Q3K9H3-F1-model_v4 deleted 0.9179 207 333
AF-A0A535ED93-F1-model_v4 Mechanosensitive ion channel 0.8974 174 244 GO:0008381
GO:0016020
AF-A0A7X6VVX4-F1-model_v4 Mechanosensitive ion channel family protein 0.8695 232 333
AF-A0A7C1A8Z2-F1-model_v4 Mechanosensitive ion channel 0.8395 175 327 GO:0005886
GO:0008381

Feature Viewer

pLDDT pTM Quality
75.27 0.5 Medium
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Predicted Structure (AlphaFold2)

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