F356490

General Info

Members Datasets Scaffolds Average Seq Length
244 159 244 309

Family's Representative Sequence

Representative Sequence 3300010375|Ga0105239_10060978|Ga0105239_100609781
Length 344
Sequence LPRAELSQARQVSIVDVLDQWAHVESLHSSPISKEFSVPESTTRASLSEQAAYQLANVTKTAPIYSAVTPRWIVRLLDWKPLEAGIFRRNRVVEEKPIEVVCSHIQESEIPATYAEYEEKPREYVLSSINAVVNIDTRVGDLFSKPYDQVREQLRVTIESVKERQENELLNNADYGLLNNVVDSQHISTRKGAPTPDDLDELLTKVWKEPSFFLANPRTIAAFGRECTRRGVPPPTVTLFGNPFLTWRGIPLIPTDKIRIAGKTPKSKILLVRVGERKQGVIGLFQPGLAGEQSPGLSVRFKGISDNGLSSYLISLYCSASVLADDAIAVLDDVEVGHYHEYTK

Samples

Sample ID Description Type Environment
1 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
5 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
6 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
7 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
10 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
11 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
12 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
13 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
14 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
15 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
16 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
17 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
18 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
19 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
20 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
21 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
22 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
23 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
24 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
25 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
26 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
27 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
28 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
29 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
30 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
31 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
32 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
33 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
34 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
35 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
36 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
37 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
38 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
39 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
40 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
41 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
42 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
43 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
44 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
45 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
46 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300028016 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 Metagenome Rhizosphere
66 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
69 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
70 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
71 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
72 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
73 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
74 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
75 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
76 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
77 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
78 3300030878 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
79 3300030879 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
80 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
81 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
82 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
83 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
84 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
85 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
86 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
87 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
88 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
89 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
90 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
91 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
92 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
93 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
94 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
95 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
96 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
97 3300033547 Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE1 Metagenome Unclassified
98 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
99 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
100 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
101 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
102 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
103 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
104 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
105 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
106 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
107 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
108 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
109 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
110 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
111 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
112 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
113 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
114 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
115 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
116 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
117 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
118 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
119 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
120 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
121 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
122 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
123 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
124 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
125 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
126 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
127 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
128 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
129 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
130 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
131 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
132 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
133 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
134 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
135 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
136 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
137 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
138 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
139 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
140 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
141 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
142 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
143 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
144 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
145 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
146 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
147 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
148 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
149 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
150 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
151 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
152 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
153 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
154 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
155 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
156 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
157 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
158 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
159 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.54
Metatranscriptomes 2.46
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.69
Nodule 0
Rhizoplane 12.3
Rhizosphere 71.31
Stem 0
Stem Tuber 0
Unclassified 12.7

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10144528 3300003316 Bacteria 1783
2 rootL2_10040193 3300003322 Bacteria 2890
3 rootL2_10050596 3300003322 Bacteria 8234
4 rootH1_10009841 3300003323 Bacteria 7086
5 rootH1_10143906 3300003323 Bacteria 2440
6 Ga0068868_100033549 3300005338 Bacteria 3957
7 Ga0070668_100019520 3300005347 Bacteria 5102
8 Ga0070668_100146832 3300005347 Bacteria 1904
9 Ga0070671_100002856 3300005355 Bacteria 13432
10 Ga0070667_100025853 3300005367 Bacteria 4883
11 Ga0070714_100136660 3300005435 Bacteria 2196
12 Ga0070714_100202757 3300005435 Bacteria 1815
13 Ga0070663_100381959 3300005455 Bacteria 1147
14 Ga0070678_100153608 3300005456 Bacteria 1857
15 Ga0070665_100018485 3300005548 Bacteria 6986
16 Ga0070665_100063010 3300005548 Bacteria 3718
17 Ga0068856_100067350 3300005614 Bacteria 3538
18 Ga0068852_100016838 3300005616 Bacteria 5715
19 Ga0068859_100174993 3300005617 Bacteria 2228
20 Ga0068864_100171169 3300005618 Bacteria 1980
21 Ga0068861_100298084 3300005719 Bacteria 1395
22 Ga0068851_10048405 3300005834 Bacteria 2154
23 Ga0068863_100051597 3300005841 Bacteria 3898
24 Ga0068863_100052684 3300005841 Bacteria 3856
25 Ga0068862_100447297 3300005844 Bacteria 1217
26 Ga0075368_10091513 3300006042 Bacteria 1244
27 Ga0075364_10024596 3300006051 Bacteria 3825
28 Ga0075367_10002061 3300006178 Bacteria 8997
29 Ga0097621_100385446 3300006237 Bacteria 1253
30 Ga0075370_10012245 3300006353 Bacteria 4527
31 Ga0068871_100079017 3300006358 Bacteria 2721
32 Ga0097620_100174990 3300006931 Bacteria 2228
33 Ga0105240_10001406 3300009093 Bacteria 41298
34 Ga0105240_10074064 3300009093 Bacteria 4204
35 Ga0111539_10007393 3300009094 Bacteria 14069
36 Ga0111539_10124414 3300009094 Bacteria 3022
37 Ga0105245_10079178 3300009098 Bacteria 3000
38 Ga0105247_10007030 3300009101 Bacteria 6924
39 Ga0105243_10176113 3300009148 Bacteria 1856
40 Ga0105243_10195651 3300009148 Bacteria 1769
41 Ga0105242_10521140 3300009176 Bacteria 1134
42 Ga0105248_10000225 3300009177 Bacteria 64965
43 Ga0105248_10000255 3300009177 Bacteria 62145
44 Ga0105237_10048233 3300009545 Bacteria 4281
45 Ga0105237_10238959 3300009545 Bacteria 1818
46 Ga0105238_10000262 3300009551 Bacteria 58846
47 Ga0105249_10063907 3300009553 Bacteria 3383
48 Ga0105239_10000966 3300010375 Bacteria 40378
49 Ga0105239_10060978 3300010375 Bacteria 4140
50 Ga0157370_10000755 3300013104 Bacteria 40393
51 Ga0157374_10000828 3300013296 Bacteria 27069
52 Ga0157378_10007591 3300013297 Bacteria 9470
53 Ga0157378_10029849 3300013297 Bacteria 4815
54 Ga0163162_10200348 3300013306 Bacteria 2125
55 Ga0157375_10215144 3300013308 Bacteria 2079
56 Ga0157379_10016660 3300014968 Bacteria 6464
57 Ga0213872_10001685 3300021361 Bacteria 13897
58 Ga0213872_10004715 3300021361 Bacteria 7160
59 Ga0213872_10044268 3300021361 Bacteria 2026
60 Ga0213871_10007689 3300021441 Bacteria 2344
61 Ga0207710_10004492 3300025900 Bacteria 6076
62 Ga0207688_10257825 3300025901 Bacteria 1058
63 Ga0207695_10000233 3300025913 Bacteria 147498
64 Ga0207695_10007923 3300025913 Bacteria 13405
65 Ga0207695_10052738 3300025913 Bacteria 4258
66 Ga0207671_10000500 3300025914 Bacteria 53262
67 Ga0207671_10128625 3300025914 Bacteria 1942
68 Ga0207671_10239162 3300025914 Bacteria 1426
69 Ga0207694_10000530 3300025924 Bacteria 34549
70 Ga0207694_10001216 3300025924 Bacteria 22366
71 Ga0207664_10039579 3300025929 Bacteria 3661
72 Ga0207664_10120931 3300025929 Bacteria 2191
73 Ga0207644_10001979 3300025931 Bacteria 13250
74 Ga0207709_10088862 3300025935 Bacteria 2013
75 Ga0207704_10309430 3300025938 Bacteria 1214
76 Ga0207665_10150118 3300025939 Bacteria 1669
77 Ga0207711_10000016 3300025941 Bacteria 486741
78 Ga0207711_10000525 3300025941 Bacteria 39339
79 Ga0207661_10344718 3300025944 Bacteria 1343
80 Ga0207668_10032513 3300025972 Bacteria 3448
81 Ga0207668_10123594 3300025972 Bacteria 1964
82 Ga0207658_10157555 3300025986 Bacteria 1857
83 Ga0207677_10114422 3300026023 Bacteria 2016
84 Ga0207677_10137547 3300026023 Bacteria 1865
85 Ga0207677_10280652 3300026023 Bacteria 1367
86 Ga0207678_10508839 3300026067 Bacteria 1050
87 Ga0207641_10013183 3300026088 Bacteria 6778
88 Ga0207641_10040164 3300026088 Bacteria 3916
89 Ga0207675_100001945 3300026118 Bacteria 20636
90 Ga0207683_10203116 3300026121 Bacteria 1802
91 Ga0207683_10405718 3300026121 Bacteria 1254
92 Ga0265354_1000184 3300028016 Bacteria 11506
93 Ga0265354_1001368 3300028016 Bacteria 3536
94 Ga0268266_10044737 3300028379 Bacteria 3785
95 Ga0268264_10093727 3300028381 Bacteria 2595
96 Ga0265326_10002380 3300028558 Bacteria 6345
97 Ga0265319_1014601 3300028563 Unclassified 3077
98 Ga0265334_10059801 3300028573 Unclassified 1439
99 Ga0265322_10049587 3300028654 Bacteria 1192
100 Ga0265336_10000377 3300028666 Bacteria 28553
101 Ga0307517_10076256 3300028786 Bacteria 2930
102 Ga0307515_10000535 3300028794 Bacteria 89416
103 Ga0307515_10114349 3300028794 Bacteria 3120
104 Ga0265338_10064247 3300028800 Bacteria 3194
105 Ga0265338_10077580 3300028800 Bacteria 2808
106 Ga0265324_10000026 3300029957 Bacteria 161746
107 Ga0307511_10044898 3300030521 Bacteria 3661
108 Ga0265770_1000061 3300030878 Bacteria 11688
109 Ga0265770_1002344 3300030878 Unclassified 2574
110 Ga0265765_1002654 3300030879 Unclassified 1747
111 Ga0265760_10003767 3300031090 Bacteria 4396
112 Ga0265760_10012182 3300031090 Bacteria 2457
113 Ga0265760_10027069 3300031090 Archaea 1679
114 Ga0265330_10053513 3300031235 Bacteria 1766
115 Ga0265332_10000132 3300031238 Bacteria 62297
116 Ga0265328_10013086 3300031239 Unclassified 3291
117 Ga0265325_10004641 3300031241 Bacteria 8623
118 Ga0265325_10027941 3300031241 Bacteria 3046
119 Ga0265325_10035914 3300031241 Bacteria 2628
120 Ga0265325_10071245 3300031241 Bacteria 1745
121 Ga0265340_10004330 3300031247 Bacteria 7948
122 Ga0265340_10006826 3300031247 Bacteria 6247
123 Ga0265340_10037776 3300031247 Bacteria 2391
124 Ga0265339_10000003 3300031249 Bacteria 305994
125 Ga0265339_10015386 3300031249 Bacteria 4586
126 Ga0265339_10188707 3300031249 Unclassified 1023
127 Ga0265331_10018017 3300031250 Bacteria 3670
128 Ga0265327_10000004 3300031251 Bacteria 803973
129 Ga0265327_10000008 3300031251 Bacteria 658870
130 Ga0265327_10000258 3300031251 Bacteria 104765
131 Ga0265327_10000521 3300031251 Bacteria 66467
132 Ga0265327_10003636 3300031251 Bacteria 14503
133 Ga0265316_10000209 3300031344 Bacteria 67997
134 Ga0265316_10006161 3300031344 Bacteria 11506
135 Ga0265316_10031751 3300031344 Bacteria 4316
136 Ga0265316_10106831 3300031344 Unclassified 2123
137 Ga0265316_10109068 3300031344 Bacteria 2098
138 Ga0307513_10004788 3300031456 Bacteria 17971
139 Ga0307513_10107483 3300031456 Bacteria 2793
140 Ga0307513_10233745 3300031456 Bacteria 1649
141 Ga0307509_10066190 3300031507 Bacteria 3792
142 Ga0307508_10033153 3300031616 Bacteria 4663
143 Ga0265314_10032116 3300031711 Bacteria 3866
144 Ga0265342_10001218 3300031712 Bacteria 24351
145 Ga0265342_10010803 3300031712 Bacteria 6294
146 Ga0307507_10066136 3300033179 Bacteria 3317
147 Ga0307510_10103248 3300033180 Bacteria 2628
148 Ga0307510_10198136 3300033180 Bacteria 1546
149 Ga0316212_1003700 3300033547 Bacteria 2214
150 Ga0316212_1007778 3300033547 Bacteria 1547
151 Ga0373937_0097849 3300036401 Bacteria 2722
152 Ga0373937_0226061 3300036401 Bacteria 1762
153 Ga0436365_1313569 3300039437 Bacteria 11656
154 Ga0436360_0449526 3300039438 Bacteria 1102
155 Ga0436360_0782719 3300039438 Bacteria 3389
156 Ga0436360_0907243 3300039438 Bacteria 1683
157 Ga0436360_1021744 3300039438 Bacteria 1624
158 Ga0436361_0064590 3300039447 Bacteria 2496
159 Ga0436361_0212937 3300039447 Bacteria 30499
160 Ga0436361_0447749 3300039447 Bacteria 2857
161 Ga0436361_0506223 3300039447 Bacteria 6693
162 Ga0436361_0849457 3300039447 Bacteria 12881
163 Ga0466961_0085140 3300044693 Bacteria 1999
164 Ga0453684_0040581 3300044712 Bacteria 6317
165 Ga0451576_0133120 3300045051 Bacteria 2592
166 Ga0451576_0346372 3300045051 Bacteria 1556
167 Ga0495629_0012600 3300046459 Bacteria 6123
168 Ga0495629_0056851 3300046459 Bacteria 2735
169 Ga0495639_0016135 3300046475 Bacteria 3240
170 Ga0495643_0091378 3300046522 Bacteria 1570
171 Ga0495648_0052878 3300046524 Bacteria 2464
172 Ga0495587_0129674 3300046536 Bacteria 1442
173 Ga0495625_0054450 3300046660 Bacteria 2857
174 Ga0495588_0003149 3300046674 Bacteria 7140
175 Ga0495588_0031702 3300046674 Bacteria 2661
176 Ga0495588_0146663 3300046674 Bacteria 1247
177 Ga0495658_0090758 3300046683 Bacteria 1809
178 Ga0495671_0068900 3300046692 Bacteria 1739
179 Ga0495649_0059947 3300046694 Bacteria 2048
180 Ga0495600_0212531 3300046809 Bacteria 1239
181 Ga0495676_0103789 3300047321 Bacteria 2098
182 Ga0495687_001204 3300047443 Bacteria 24767
183 Ga0495681_0015726 3300047470 Bacteria 4272
184 Ga0495686_0015827 3300047472 Bacteria 5133
185 Ga0495614_0005146 3300048089 Bacteria 5900
186 Ga0496100_0001545 3300048903 Bacteria 11304
187 Ga0496100_0270696 3300048903 Bacteria 1263
188 Ga0496101_0006501 3300048904 Bacteria 7525
189 Ga0496102_0000286 3300048905 Bacteria 64518
190 Ga0496102_0002464 3300048905 Bacteria 15786
191 Ga0496102_0206409 3300048905 Bacteria 1852
192 Ga0496103_0000490 3300048906 Bacteria 32894
193 Ga0496103_0146094 3300048906 Bacteria 1514
194 Ga0496104_0035050 3300048907 Bacteria 4684
195 Ga0496104_0111533 3300048907 Bacteria 2622
196 Ga0496105_0038917 3300048908 Bacteria 3918
197 Ga0496105_0086054 3300048908 Bacteria 2597
198 Ga0496107_0008296 3300048910 Bacteria 7185
199 Ga0496108_0014016 3300048911 Bacteria 6540
200 Ga0496108_0044964 3300048911 Bacteria 3687
201 Ga0496108_0181859 3300048911 Bacteria 1821
202 Ga0496108_0348959 3300048911 Bacteria 1291
203 Ga0496109_0092617 3300048912 Bacteria 2795
204 Ga0496110_0044991 3300048913 Bacteria 3856
205 Ga0496110_0082308 3300048913 Bacteria 2870
206 Ga0496110_0145706 3300048913 Bacteria 2142
207 Ga0496111_0005876 3300048914 Bacteria 7915
208 Ga0496112_0128188 3300048915 Bacteria 2508
209 Ga0496112_0145359 3300048915 Bacteria 2340
210 Ga0496113_0011407 3300048916 Bacteria 5925
211 Ga0496114_0002651 3300048917 Bacteria 13648
212 Ga0496114_0010882 3300048917 Bacteria 7248
213 Ga0496114_0087427 3300048917 Bacteria 2643
214 Ga0496114_0136655 3300048917 Bacteria 2120
215 Ga0496115_0512493 3300048918 Bacteria 963
216 Ga0496116_0000716 3300048919 Bacteria 42501
217 Ga0496117_0000579 3300048920 Bacteria 60223
218 Ga0496118_0000587 3300048921 Bacteria 60205
219 Ga0496119_0001329 3300048922 Bacteria 30377
220 Ga0496119_0002001 3300048922 Bacteria 23100
221 Ga0496119_0179994 3300048922 Bacteria 1109
222 Ga0496120_0002815 3300048923 Bacteria 16800
223 Ga0496121_0011271 3300048924 Bacteria 9961
224 Ga0496125_0004720 3300048928 Bacteria 15536
225 Ga0496125_0032811 3300048928 Bacteria 4606
226 Ga0496126_0000649 3300048929 Bacteria 64480
227 Ga0501033_0050460 3300049570 Bacteria 3086
228 Ga0501037_0207315 3300049573 Bacteria 1383
229 Ga0501038_0029055 3300049574 Bacteria 4903
230 Ga0501043_0127162 3300049579 Bacteria 1998
231 Ga0501047_0188632 3300049581 Bacteria 1926
232 Ga0501067_0020694 3300049583 Bacteria 3640
233 Ga0501035_0008984 3300049822 Bacteria 9293
234 Ga0501044_0030396 3300049823 Bacteria 5693
235 Ga0501044_0037219 3300049823 Bacteria 5087
236 nmdc:mga00v17_12410_c1 3300050491 Bacteria 4702
237 nmdc:mga06z11_21792_c1 3300050494 Bacteria 2982
238 nmdc:mga07m45_9192_c1 3300050496 Bacteria 5112
239 nmdc:mga08y16_14138_c1 3300050511 Bacteria 8400
240 nmdc:mga08y16_40405_c1 3300050511 Bacteria 4890
241 Ga0495655_0022056 3300053083 Bacteria 1450
242 Ga0500651_0000002 3300053093 Bacteria 476609
243 Ga0500634_0149898 3300053161 Bacteria 1092
244 Ga0466962_0031167 3300061719 Bacteria 2553

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300049570 Ga0501033_0050460 Ga0501033_0050460_2245_3063 266
2 3300003323 rootH1_10009841 rootH1_100098415 276
3 3300046809 Ga0495600_0212531 Ga0495600_0212531_354_1199 277
4 3300048918 Ga0496115_0512493 Ga0496115_0512493_53_892 277
5 3300039438 Ga0436360_1021744 Ga0436360_1021744_443_1321 284
6 3300009148 Ga0105243_10195651 Ga0105243_101956512 288
7 3300031235 Ga0265330_10053513 Ga0265330_100535132 290
8 3300036401 Ga0373937_0226061 Ga0373937_0226061_586_1500 294
9 3300009177 Ga0105248_10000225 Ga0105248_100002256 297
10 3300039437 Ga0436365_1313569 Ga0436365_1313569_5100_6074 297
11 3300046459 Ga0495629_0012600 Ga0495629_0012600_3154_4059 297
12 3300046660 Ga0495625_0054450 Ga0495625_0054450_981_1886 297
13 3300046674 Ga0495588_0031702 Ga0495588_0031702_733_1638 297
14 3300046674 Ga0495588_0146663 Ga0495588_0146663_256_1161 297
15 3300046692 Ga0495671_0068900 Ga0495671_0068900_713_1618 297
16 3300047443 Ga0495687_001204 Ga0495687_001204_15066_15971 297
17 3300047470 Ga0495681_0015726 Ga0495681_0015726_2855_3760 297
18 3300048089 Ga0495614_0005146 Ga0495614_0005146_1045_1950 297
19 3300053161 Ga0500634_0149898 Ga0500634_0149898_128_1033 297
20 3300031250 Ga0265331_10018017 Ga0265331_100180171 301
21 3300005347 Ga0070668_100019520 Ga0070668_1000195202 303
22 3300005355 Ga0070671_100002856 Ga0070671_1000028563 303
23 3300005456 Ga0070678_100153608 Ga0070678_1001536082 303
24 3300005618 Ga0068864_100171169 Ga0068864_1001711692 303
25 3300005841 Ga0068863_100051597 Ga0068863_1000515974 303
26 3300006358 Ga0068871_100079017 Ga0068871_1000790172 303
27 3300025931 Ga0207644_10001979 Ga0207644_100019792 303
28 3300025972 Ga0207668_10032513 Ga0207668_100325132 303
29 3300026023 Ga0207677_10280652 Ga0207677_102806522 303
30 3300026088 Ga0207641_10013183 Ga0207641_100131834 303
31 3300026121 Ga0207683_10203116 Ga0207683_102031162 303
32 3300028800 Ga0265338_10077580 Ga0265338_100775802 303
33 3300031344 Ga0265316_10109068 Ga0265316_101090683 303
34 3300045051 Ga0451576_0346372 Ga0451576_0346372_589_1515 303
35 3300046459 Ga0495629_0056851 Ga0495629_0056851_1318_2232 303
36 3300046475 Ga0495639_0016135 Ga0495639_0016135_1061_1975 303
37 3300046683 Ga0495658_0090758 Ga0495658_0090758_50_964 303
38 3300047321 Ga0495676_0103789 Ga0495676_0103789_180_1094 303
39 3300048903 Ga0496100_0001545 Ga0496100_0001545_6672_7604 303
40 3300048904 Ga0496101_0006501 Ga0496101_0006501_6488_7420 303
41 3300048905 Ga0496102_0000286 Ga0496102_0000286_3694_4626 303
42 3300048906 Ga0496103_0000490 Ga0496103_0000490_3695_4627 303
43 3300048907 Ga0496104_0035050 Ga0496104_0035050_524_1456 303
44 3300048911 Ga0496108_0044964 Ga0496108_0044964_1688_2620 303
45 3300048911 Ga0496108_0348959 Ga0496108_0348959_251_1177 303
46 3300048913 Ga0496110_0145706 Ga0496110_0145706_1166_2098 303
47 3300048917 Ga0496114_0010882 Ga0496114_0010882_3865_4791 303
48 3300048919 Ga0496116_0000716 Ga0496116_0000716_3695_4627 303
49 3300048920 Ga0496117_0000579 Ga0496117_0000579_21402_22334 303
50 3300048921 Ga0496118_0000587 Ga0496118_0000587_37872_38804 303
51 3300048922 Ga0496119_0001329 Ga0496119_0001329_3733_4665 303
52 3300048923 Ga0496120_0002815 Ga0496120_0002815_252_1184 303
53 3300048928 Ga0496125_0032811 Ga0496125_0032811_3605_4537 303
54 3300048929 Ga0496126_0000649 Ga0496126_0000649_59884_60816 303
55 3300005435 Ga0070714_100136660 Ga0070714_1001366602 304
56 3300005435 Ga0070714_100202757 Ga0070714_1002027572 304
57 3300005455 Ga0070663_100381959 Ga0070663_1003819591 304
58 3300005616 Ga0068852_100016838 Ga0068852_1000168384 304
59 3300005719 Ga0068861_100298084 Ga0068861_1002980842 304
60 3300005844 Ga0068862_100447297 Ga0068862_1004472972 304
61 3300009094 Ga0111539_10007393 Ga0111539_1000739310 304
62 3300009094 Ga0111539_10124414 Ga0111539_101244142 304
63 3300009148 Ga0105243_10176113 Ga0105243_101761132 304
64 3300009176 Ga0105242_10521140 Ga0105242_105211401 304
65 3300009553 Ga0105249_10063907 Ga0105249_100639074 304
66 3300013104 Ga0157370_10000755 Ga0157370_1000075530 304
67 3300013306 Ga0163162_10200348 Ga0163162_102003482 304
68 3300013308 Ga0157375_10215144 Ga0157375_102151442 304
69 3300025901 Ga0207688_10257825 Ga0207688_102578251 304
70 3300025929 Ga0207664_10039579 Ga0207664_100395792 304
71 3300025929 Ga0207664_10120931 Ga0207664_101209311 304
72 3300025935 Ga0207709_10088862 Ga0207709_100888622 304
73 3300025938 Ga0207704_10309430 Ga0207704_103094302 304
74 3300026023 Ga0207677_10114422 Ga0207677_101144221 304
75 3300026067 Ga0207678_10508839 Ga0207678_105088392 304
76 3300026118 Ga0207675_100001945 Ga0207675_1000019452 304
77 3300026121 Ga0207683_10405718 Ga0207683_104057181 304
78 3300028381 Ga0268264_10093727 Ga0268264_100937272 304
79 3300028654 Ga0265322_10049587 Ga0265322_100495871 304
80 3300028786 Ga0307517_10076256 Ga0307517_100762563 304
81 3300028794 Ga0307515_10000535 Ga0307515_1000053524 304
82 3300028794 Ga0307515_10114349 Ga0307515_101143492 304
83 3300029957 Ga0265324_10000026 Ga0265324_1000002645 304
84 3300030521 Ga0307511_10044898 Ga0307511_100448982 304
85 3300031238 Ga0265332_10000132 Ga0265332_100001323 304
86 3300031247 Ga0265340_10037776 Ga0265340_100377763 304
87 3300031251 Ga0265327_10000004 Ga0265327_10000004458 304
88 3300031251 Ga0265327_10000008 Ga0265327_10000008468 304
89 3300031251 Ga0265327_10003636 Ga0265327_100036363 304
90 3300031344 Ga0265316_10031751 Ga0265316_100317512 304
91 3300031456 Ga0307513_10004788 Ga0307513_100047883 304
92 3300031456 Ga0307513_10107483 Ga0307513_101074832 304
93 3300031456 Ga0307513_10233745 Ga0307513_102337452 304
94 3300031507 Ga0307509_10066190 Ga0307509_100661902 304
95 3300031616 Ga0307508_10033153 Ga0307508_100331532 304
96 3300031711 Ga0265314_10032116 Ga0265314_100321163 304
97 3300033179 Ga0307507_10066136 Ga0307507_100661362 304
98 3300033180 Ga0307510_10103248 Ga0307510_101032482 304
99 3300033180 Ga0307510_10198136 Ga0307510_101981362 304
100 3300044693 Ga0466961_0085140 Ga0466961_0085140_20_958 304
101 3300044712 Ga0453684_0040581 Ga0453684_0040581_887_1804 304
102 3300045051 Ga0451576_0133120 Ga0451576_0133120_69_992 304
103 3300046536 Ga0495587_0129674 Ga0495587_0129674_351_1280 304
104 3300046674 Ga0495588_0003149 Ga0495588_0003149_3058_3996 304
105 3300047472 Ga0495686_0015827 Ga0495686_0015827_2232_3170 304
106 3300048903 Ga0496100_0270696 Ga0496100_0270696_118_1053 304
107 3300048905 Ga0496102_0002464 Ga0496102_0002464_11843_12772 304
108 3300048905 Ga0496102_0206409 Ga0496102_0206409_227_1156 304
109 3300048906 Ga0496103_0146094 Ga0496103_0146094_235_1158 304
110 3300048908 Ga0496105_0038917 Ga0496105_0038917_2910_3839 304
111 3300048910 Ga0496107_0008296 Ga0496107_0008296_5982_6926 304
112 3300048911 Ga0496108_0014016 Ga0496108_0014016_1123_2052 304
113 3300048911 Ga0496108_0181859 Ga0496108_0181859_709_1644 304
114 3300048912 Ga0496109_0092617 Ga0496109_0092617_418_1347 304
115 3300048913 Ga0496110_0082308 Ga0496110_0082308_1894_2823 304
116 3300048914 Ga0496111_0005876 Ga0496111_0005876_2449_3378 304
117 3300048915 Ga0496112_0145359 Ga0496112_0145359_770_1699 304
118 3300048916 Ga0496113_0011407 Ga0496113_0011407_4484_5413 304
119 3300048917 Ga0496114_0002651 Ga0496114_0002651_12298_13233 304
120 3300048917 Ga0496114_0087427 Ga0496114_0087427_683_1612 304
121 3300048917 Ga0496114_0136655 Ga0496114_0136655_971_1900 304
122 3300048924 Ga0496121_0011271 Ga0496121_0011271_1344_2273 304
123 3300048928 Ga0496125_0004720 Ga0496125_0004720_1616_2563 304
124 3300049573 Ga0501037_0207315 Ga0501037_0207315_37_972 304
125 3300049574 Ga0501038_0029055 Ga0501038_0029055_2252_3187 304
126 3300049579 Ga0501043_0127162 Ga0501043_0127162_421_1356 304
127 3300049581 Ga0501047_0188632 Ga0501047_0188632_62_997 304
128 3300049822 Ga0501035_0008984 Ga0501035_0008984_5403_6338 304
129 3300049823 Ga0501044_0030396 Ga0501044_0030396_2510_3445 304
130 3300049823 Ga0501044_0037219 Ga0501044_0037219_1235_2170 304
131 3300050511 nmdc:mga08y16_14138_c1 nmdc:mga08y16_14138_c1_6905_7840 304
132 3300050511 nmdc:mga08y16_40405_c1 nmdc:mga08y16_40405_c1_1274_2209 304
133 3300053083 Ga0495655_0022056 Ga0495655_0022056_41_979 304
134 3300003322 rootL2_10040193 rootL2_100401932 305
135 3300003323 rootH1_10143906 rootH1_101439062 305
136 3300009545 Ga0105237_10238959 Ga0105237_102389592 305
137 3300025914 Ga0207671_10239162 Ga0207671_102391621 305
138 3300025939 Ga0207665_10150118 Ga0207665_101501182 305
139 3300031251 Ga0265327_10000258 Ga0265327_1000025868 305
140 3300031251 Ga0265327_10000521 Ga0265327_1000052155 305
141 3300031344 Ga0265316_10000209 Ga0265316_1000020929 305
142 3300039438 Ga0436360_0782719 Ga0436360_0782719_1134_2081 305
143 3300039438 Ga0436360_0907243 Ga0436360_0907243_213_1163 305
144 3300039447 Ga0436361_0447749 Ga0436361_0447749_1409_2356 305
145 3300048907 Ga0496104_0111533 Ga0496104_0111533_23_970 305
146 3300048908 Ga0496105_0086054 Ga0496105_0086054_1628_2575 305
147 3300048913 Ga0496110_0044991 Ga0496110_0044991_299_1246 305
148 3300048915 Ga0496112_0128188 Ga0496112_0128188_1162_2109 305
149 3300048922 Ga0496119_0002001 Ga0496119_0002001_19125_20072 305
150 3300048922 Ga0496119_0179994 Ga0496119_0179994_53_1000 305
151 3300049583 Ga0501067_0020694 Ga0501067_0020694_299_1240 305
152 3300061719 Ga0466962_0031167 Ga0466962_0031167_629_1555 305
153 3300003316 rootH1_10144528 rootH1_101445282 306
154 3300003322 rootL2_10050596 rootL2_100505965 306
155 3300005338 Ga0068868_100033549 Ga0068868_1000335493 306
156 3300005347 Ga0070668_100146832 Ga0070668_1001468322 306
157 3300005367 Ga0070667_100025853 Ga0070667_1000258534 306
158 3300005548 Ga0070665_100018485 Ga0070665_1000184853 306
159 3300005548 Ga0070665_100063010 Ga0070665_1000630102 306
160 3300005614 Ga0068856_100067350 Ga0068856_1000673502 306
161 3300005617 Ga0068859_100174993 Ga0068859_1001749932 306
162 3300005834 Ga0068851_10048405 Ga0068851_100484052 306
163 3300005841 Ga0068863_100052684 Ga0068863_1000526843 306
164 3300006042 Ga0075368_10091513 Ga0075368_100915132 306
165 3300006051 Ga0075364_10024596 Ga0075364_100245962 306
166 3300006178 Ga0075367_10002061 Ga0075367_100020615 306
167 3300006237 Ga0097621_100385446 Ga0097621_1003854462 306
168 3300006353 Ga0075370_10012245 Ga0075370_100122452 306
169 3300006931 Ga0097620_100174990 Ga0097620_1001749902 306
170 3300009093 Ga0105240_10001406 Ga0105240_1000140613 306
171 3300009093 Ga0105240_10074064 Ga0105240_100740643 306
172 3300009098 Ga0105245_10079178 Ga0105245_100791785 306
173 3300009101 Ga0105247_10007030 Ga0105247_100070303 306
174 3300009177 Ga0105248_10000255 Ga0105248_100002557 306
175 3300009545 Ga0105237_10048233 Ga0105237_100482333 306
176 3300009551 Ga0105238_10000262 Ga0105238_1000026245 306
177 3300010375 Ga0105239_10000966 Ga0105239_1000096613 306
178 3300010375 Ga0105239_10060978 Ga0105239_100609781 306
179 3300013296 Ga0157374_10000828 Ga0157374_1000082812 306
180 3300013297 Ga0157378_10007591 Ga0157378_100075916 306
181 3300013297 Ga0157378_10029849 Ga0157378_100298492 306
182 3300014968 Ga0157379_10016660 Ga0157379_100166602 306
183 3300021361 Ga0213872_10001685 Ga0213872_100016859 306
184 3300021361 Ga0213872_10004715 Ga0213872_100047155 306
185 3300021361 Ga0213872_10044268 Ga0213872_100442682 306
186 3300021441 Ga0213871_10007689 Ga0213871_100076892 306
187 3300025900 Ga0207710_10004492 Ga0207710_100044924 306
188 3300025913 Ga0207695_10000233 Ga0207695_1000023320 306
189 3300025913 Ga0207695_10007923 Ga0207695_100079236 306
190 3300025913 Ga0207695_10052738 Ga0207695_100527383 306
191 3300025914 Ga0207671_10000500 Ga0207671_100005009 306
192 3300025914 Ga0207671_10128625 Ga0207671_101286251 306
193 3300025924 Ga0207694_10000530 Ga0207694_1000053031 306
194 3300025924 Ga0207694_10001216 Ga0207694_1000121610 306
195 3300025941 Ga0207711_10000016 Ga0207711_10000016311 306
196 3300025941 Ga0207711_10000525 Ga0207711_100005257 306
197 3300025944 Ga0207661_10344718 Ga0207661_103447182 306
198 3300025972 Ga0207668_10123594 Ga0207668_101235942 306
199 3300025986 Ga0207658_10157555 Ga0207658_101575552 306
200 3300026023 Ga0207677_10137547 Ga0207677_101375472 306
201 3300026088 Ga0207641_10040164 Ga0207641_100401642 306
202 3300028016 Ga0265354_1000184 Ga0265354_10001845 306
203 3300028016 Ga0265354_1001368 Ga0265354_10013682 306
204 3300028379 Ga0268266_10044737 Ga0268266_100447372 306
205 3300028558 Ga0265326_10002380 Ga0265326_100023805 306
206 3300028563 Ga0265319_1014601 Ga0265319_10146012 306
207 3300028573 Ga0265334_10059801 Ga0265334_100598012 306
208 3300028666 Ga0265336_10000377 Ga0265336_1000037717 306
209 3300028800 Ga0265338_10064247 Ga0265338_100642472 306
210 3300030878 Ga0265770_1000061 Ga0265770_10000612 306
211 3300030878 Ga0265770_1002344 Ga0265770_10023442 306
212 3300030879 Ga0265765_1002654 Ga0265765_10026542 306
213 3300031090 Ga0265760_10003767 Ga0265760_100037672 306
214 3300031090 Ga0265760_10012182 Ga0265760_100121822 306
215 3300031090 Ga0265760_10027069 Ga0265760_100270692 306
216 3300031239 Ga0265328_10013086 Ga0265328_100130862 306
217 3300031241 Ga0265325_10004641 Ga0265325_100046418 306
218 3300031241 Ga0265325_10027941 Ga0265325_100279412 306
219 3300031241 Ga0265325_10035914 Ga0265325_100359143 306
220 3300031241 Ga0265325_10071245 Ga0265325_100712451 306
221 3300031247 Ga0265340_10004330 Ga0265340_100043304 306
222 3300031247 Ga0265340_10006826 Ga0265340_100068263 306
223 3300031249 Ga0265339_10000003 Ga0265339_1000000397 306
224 3300031249 Ga0265339_10015386 Ga0265339_100153861 306
225 3300031249 Ga0265339_10188707 Ga0265339_101887072 306
226 3300031344 Ga0265316_10006161 Ga0265316_1000616111 306
227 3300031344 Ga0265316_10106831 Ga0265316_101068312 306
228 3300031712 Ga0265342_10001218 Ga0265342_100012186 306
229 3300031712 Ga0265342_10010803 Ga0265342_100108034 306
230 3300033547 Ga0316212_1003700 Ga0316212_10037002 306
231 3300033547 Ga0316212_1007778 Ga0316212_10077782 306
232 3300036401 Ga0373937_0097849 Ga0373937_0097849_382_1323 306
233 3300039438 Ga0436360_0449526 Ga0436360_0449526_108_1049 306
234 3300039447 Ga0436361_0064590 Ga0436361_0064590_825_1745 306
235 3300039447 Ga0436361_0212937 Ga0436361_0212937_19841_20761 306
236 3300039447 Ga0436361_0506223 Ga0436361_0506223_1323_2243 306
237 3300039447 Ga0436361_0849457 Ga0436361_0849457_7554_8474 306
238 3300046522 Ga0495643_0091378 Ga0495643_0091378_16_936 306
239 3300046524 Ga0495648_0052878 Ga0495648_0052878_345_1265 306
240 3300046694 Ga0495649_0059947 Ga0495649_0059947_763_1683 306
241 3300050491 nmdc:mga00v17_12410_c1 nmdc:mga00v17_12410_c1_2348_3271 306
242 3300050494 nmdc:mga06z11_21792_c1 nmdc:mga06z11_21792_c1_905_1828 306
243 3300050496 nmdc:mga07m45_9192_c1 nmdc:mga07m45_9192_c1_1512_2435 306
244 3300053093 Ga0500651_0000002 Ga0500651_0000002_256796_257716 306

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF19307

SrpI-like

Type 2A encapsulin shell protein SrpI-like

85

338

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
6x8m-assembly1.cif.gz_A cryoem structure of the holo-srpi encapsulin complex from synechococcus elongatus pcc 7942 0.7604 9 306
6x8m-assembly1.cif.gz_A cryoem structure of the holo-srpi encapsulin complex from synechococcus elongatus pcc 7942 0.7529 9 306
2fs3-assembly1.cif.gz_A-60 bacteriophage hk97 k169y head i 0.5993 23 245
8edu-assembly1.cif.gz_A mycobacteriophage muddy capsid 0.5747 23 235
8gta-assembly1.cif.gz_A cryo-em structure of the marine siphophage vb_dshs-r4c capsid 0.5664 23 235
ID Description Score Start End Superfamily
af_O06446_605_782_1.10.3060.10 Mainly Alpha;Orthogonal Bundle;Helical scaffold and wing domains of SecA;Helical scaffold and wing domains of SecA 0.5735 93 132 1.10.3060.10
af_Q2G2S2_126_378_3.90.1690.10 Alpha Beta;Alpha-Beta Complex;phage-related protein like fold;phage-related protein like domain 0.5604 6 232 3.90.1690.10
3oajB02 Alpha Beta;Roll;2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1;2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.5603 174 225 3.10.180.10
af_Q2G1W8_117_397_3.30.2400.30 Alpha Beta;2-Layer Sandwich;Major capsid protein gp5 fold; 0.5309 10 236 3.30.2400.30
af_Q9M332_31_439_2.130.10.80 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;Galactose oxidase/kelch, beta-propeller 0.4942 221 235 2.130.10.80
ID Description Score Start End GO Terms
AF-A0A2J1D4A1-F1-model_v4 deleted 0.9882 125 224
AF-A0A7S1MWE9-F1-model_v4 Type 2A encapsulin shell protein SrpI-like domain-containing protein 0.9854 114 241
AF-A0A7S1MWE9-F1-model_v4 Type 2A encapsulin shell protein SrpI-like domain-containing protein 0.9628 114 241
AF-A0A177HR97-F1-model_v4 Major membrane protein I 0.9342 157 217
AF-A0A2J1D4A1-F1-model_v4 deleted 0.9327 125 224

Feature Viewer

pLDDT pTM Quality
66.17 0.64 Medium
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Predicted Structure (AlphaFold2)

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