F356549

General Info

Members Datasets Scaffolds Average Seq Length
244 149 488 440

Family's Representative Sequence

Representative Sequence 3300025909|Ga0207705_10000032|Ga0207705_10000032166
Length 477
Sequence MCETTGVSLWNQPGQPLNTINLINFLITWVSFPLTNEPFIALYPFAAGCRYRGHRGADNRFKVPAFFALFAACLVVGLGSGTALGDVVGTMKDGFGNVMKSLGLIIVLGTTLGLLLEYTGSTTVMATALLKVLGKRYAAWAMGITGFIVGLPIFCDSGFIVLSGLNHSMVKRTGIPLAAMSFSLATGLLAVHCLVPPHPGASAAAANLGVDLGRLILVGTLVAIPAMIVGNLWANYAGRKAPDVLNDAILDAGETALGPPLIQAFLPVLVPILLIAFKSFLTAENKSYHGWLNAIAPLGDPEIALLIGVLLALTCKSGWRKNELTKLLQESAEKAGGILVIIGMGGAFGAILTATKIGDHFSQSIALGSMGLLFPFLLTSVLKTAQGSSTVAIITASSLVLPLLPALGLDSENGRLLCVLSMGAGSMVLSHANDAYFWVIAKFAGLEMRTMLRVYSVATVLMGVTTFIVVYLLSKIL

Samples

Sample ID Description Type Environment
1 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
4 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
5 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
6 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
7 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
8 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
9 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
10 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
11 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
12 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
13 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
14 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
15 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
16 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
17 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
18 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
19 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
20 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
21 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
22 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
23 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
24 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
25 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
26 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
27 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
28 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
29 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
30 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
31 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
32 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
33 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
34 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
35 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
36 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
37 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
38 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
39 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
40 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
41 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
42 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
43 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
44 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
45 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
46 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
47 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
48 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
49 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
50 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
51 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
52 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
53 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
54 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
55 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
56 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
57 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
58 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
59 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
60 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
61 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
62 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
63 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
64 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
65 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
66 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
67 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
68 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
69 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
70 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
71 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
72 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
73 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
74 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
75 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
76 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
77 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
78 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
113 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
114 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
115 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
116 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
117 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
118 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
119 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
120 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
121 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
122 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
123 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
124 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
125 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
126 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
127 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
128 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
129 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
130 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
131 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
132 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
133 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
134 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
135 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
136 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
137 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
138 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
139 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
140 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
141 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
142 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
143 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
145 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
146 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
147 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
148 2929921140 Chitinophaga sp. R-72609 Hybrid assembly Isolate Unclassified
149 8003151029 Chitinophaga sp. GbtcB8 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.18
Metatranscriptomes 0
Isolates 0.82

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.05
Nodule 0
Rhizoplane 0.82
Rhizosphere 92.21
Stem 0
Stem Tuber 0
Unclassified 9.43

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207705_10000032 3300025909 Bacteria 224376
2 JGI24740J21852_10003050 3300001979 Bacteria 7403
3 JGI25154J39366_1000001 3300002738 Bacteria 483450
4 JGI25406J46586_10001400 3300003203 Bacteria 11404
5 rootH1_10140045 3300003316 Bacteria 7134
6 rootH2_10000579 3300003320 Bacteria 178428
7 rootH1_10192984 3300003323 Bacteria 2229
8 Ga0070658_10000032 3300005327 Bacteria 147726
9 Ga0070658_10056076 3300005327 Bacteria 3202
10 Ga0070676_10000351 3300005328 Bacteria 21115
11 Ga0070676_10008992 3300005328 Bacteria 5403
12 Ga0070676_10098946 3300005328 Bacteria 1799
13 Ga0070683_100052730 3300005329 Unclassified 3769
14 Ga0070683_100067037 3300005329 Bacteria 3343
15 Ga0070683_100182184 3300005329 Bacteria 1994
16 Ga0070690_100003121 3300005330 Bacteria 9021
17 Ga0070670_100025115 3300005331 Bacteria 5127
18 Ga0068869_100017213 3300005334 Bacteria 4893
19 Ga0068869_100200196 3300005334 Unclassified 1574
20 Ga0070680_100009784 3300005336 Bacteria 7379
21 Ga0068868_100069761 3300005338 Bacteria 2801
22 Ga0068868_100082701 3300005338 Unclassified 2575
23 Ga0068868_100117645 3300005338 Bacteria 2165
24 Ga0070660_100022601 3300005339 Unclassified 4653
25 Ga0070661_100021899 3300005344 Unclassified 4571
26 Ga0070669_100001473 3300005353 Bacteria 17021
27 Ga0070669_100067846 3300005353 Bacteria 2632
28 Ga0070675_100011641 3300005354 Bacteria 6892
29 Ga0070671_100036450 3300005355 Bacteria 4079
30 Ga0070674_100024103 3300005356 Unclassified 3947
31 Ga0070674_100137120 3300005356 Bacteria 1832
32 Ga0070673_100001687 3300005364 Bacteria 13102
33 Ga0070667_100010511 3300005367 Bacteria 7642
34 Ga0070667_100094539 3300005367 Bacteria 2576
35 Ga0070678_100020171 3300005456 Bacteria 4368
36 Ga0070678_100024245 3300005456 Bacteria 4058
37 Ga0070662_100031451 3300005457 Bacteria 3724
38 Ga0068867_100003010 3300005459 Bacteria 11877
39 Ga0068867_100004842 3300005459 Bacteria 9468
40 Ga0068867_100029443 3300005459 Unclassified 3956
41 Ga0070685_10048463 3300005466 Bacteria 2447
42 Ga0070679_100013479 3300005530 Bacteria 7828
43 Ga0070679_100180831 3300005530 Bacteria 2081
44 Ga0070684_100000214 3300005535 Bacteria 40555
45 Ga0070684_100002052 3300005535 Bacteria 14826
46 Ga0068853_100019133 3300005539 Bacteria 5674
47 Ga0070693_100049005 3300005547 Bacteria 2408
48 Ga0070665_100000012 3300005548 Bacteria 508937
49 Ga0070665_100017638 3300005548 Bacteria 7169
50 Ga0068855_100000218 3300005563 Bacteria 73075
51 Ga0068855_100000621 3300005563 Bacteria 43643
52 Ga0068855_100280758 3300005563 Bacteria 1849
53 Ga0070664_100006231 3300005564 Bacteria 9633
54 Ga0070664_100041601 3300005564 Bacteria 3878
55 Ga0070664_100090127 3300005564 Bacteria 2654
56 Ga0068857_100052362 3300005577 Bacteria 3622
57 Ga0068857_100058553 3300005577 Unclassified 3421
58 Ga0068854_100013510 3300005578 Bacteria 5361
59 Ga0068856_100001838 3300005614 Bacteria 22215
60 Ga0068856_100034440 3300005614 Unclassified 4961
61 Ga0070702_100059539 3300005615 Bacteria 2217
62 Ga0068852_100008627 3300005616 Bacteria 7528
63 Ga0068852_100012048 3300005616 Bacteria 6545
64 Ga0068852_100113161 3300005616 Bacteria 2471
65 Ga0068859_100010423 3300005617 Bacteria 9350
66 Ga0068859_100046239 3300005617 Bacteria 4371
67 Ga0068866_10008025 3300005718 Bacteria 4435
68 Ga0068866_10021349 3300005718 Bacteria 2981
69 Ga0068863_100038293 3300005841 Bacteria 4562
70 Ga0068858_100141548 3300005842 Unclassified 2258
71 Ga0068858_100200524 3300005842 Bacteria 1887
72 Ga0068860_100023712 3300005843 Bacteria 5931
73 Ga0068860_100024871 3300005843 Bacteria 5781
74 Ga0068862_100013075 3300005844 Bacteria 6866
75 Ga0068862_100125373 3300005844 Unclassified 2267
76 Ga0081539_10000523 3300005985 Bacteria 79800
77 Ga0097621_100000200 3300006237 Bacteria 38903
78 Ga0068871_100000174 3300006358 Bacteria 43345
79 Ga0068871_100010641 3300006358 Bacteria 6724
80 Ga0068871_100017855 3300006358 Bacteria 5379
81 Ga0068865_100000100 3300006881 Bacteria 44815
82 Ga0097620_100010423 3300006931 Bacteria 9350
83 Ga0097620_100046240 3300006931 Bacteria 4371
84 Ga0105240_10005758 3300009093 Bacteria 18378
85 Ga0105240_10016885 3300009093 Bacteria 9865
86 Ga0105240_10075089 3300009093 Unclassified 4170
87 Ga0105240_10202270 3300009093 Bacteria 2327
88 Ga0105240_10335658 3300009093 Bacteria 1718
89 Ga0105245_10062346 3300009098 Unclassified 3364
90 Ga0105241_10034234 3300009174 Bacteria 3815
91 Ga0105242_10009969 3300009176 Bacteria 7275
92 Ga0105242_10037765 3300009176 Bacteria 3881
93 Ga0105248_10211781 3300009177 Bacteria 2184
94 Ga0105237_10001192 3300009545 Bacteria 34799
95 Ga0105237_10003373 3300009545 Bacteria 19006
96 Ga0105237_10003465 3300009545 Bacteria 18709
97 Ga0105238_10011689 3300009551 Bacteria 8850
98 Ga0105249_10110454 3300009553 Bacteria 2598
99 Ga0105249_10148962 3300009553 Bacteria 2251
100 Ga0105239_10000006 3300010375 Bacteria 442319
101 Ga0105239_10010983 3300010375 Bacteria 10108
102 Ga0105239_10052740 3300010375 Bacteria 4460
103 Ga0105239_10061527 3300010375 Bacteria 4120
104 Ga0105239_10119912 3300010375 Bacteria 2920
105 Ga0105239_10132029 3300010375 Bacteria 2778
106 Ga0105246_10009802 3300011119 Bacteria 5907
107 Ga0105246_10098556 3300011119 Unclassified 2123
108 Ga0157370_10024710 3300013104 Bacteria 5949
109 Ga0157374_10001143 3300013296 Bacteria 22611
110 Ga0157378_10005740 3300013297 Bacteria 10868
111 Ga0157378_10018598 3300013297 Bacteria 6109
112 Ga0157378_10035884 3300013297 Bacteria 4388
113 Ga0163162_10000062 3300013306 Bacteria 105579
114 Ga0163162_10003037 3300013306 Bacteria 16034
115 Ga0163162_10163064 3300013306 Bacteria 2352
116 Ga0163162_10169741 3300013306 Bacteria 2306
117 Ga0157372_10004167 3300013307 Bacteria 15473
118 Ga0157375_10009600 3300013308 Bacteria 8500
119 Ga0157375_10020800 3300013308 Bacteria 6005
120 Ga0157375_10429718 3300013308 Bacteria 1487
121 Ga0157375_10430093 3300013308 Bacteria 1486
122 Ga0163163_10017886 3300014325 Bacteria 6620
123 Ga0163163_10028229 3300014325 Bacteria 5386
124 Ga0163163_10261328 3300014325 Bacteria 1782
125 Ga0157377_10007399 3300014745 Bacteria 5299
126 Ga0157377_10018217 3300014745 Bacteria 3648
127 Ga0157377_10025797 3300014745 Bacteria 3138
128 Ga0157379_10014854 3300014968 Bacteria 6829
129 Ga0157379_10090257 3300014968 Bacteria 2749
130 Ga0157379_10105121 3300014968 Unclassified 2534
131 Ga0157376_10015051 3300014969 Bacteria 5830
132 Ga0157376_10179652 3300014969 Bacteria 1933
133 Ga0163161_10028048 3300017792 Bacteria 3996
134 Ga0163161_10085938 3300017792 Bacteria 2321
135 Ga0163161_10110948 3300017792 Bacteria 2050
136 Ga0213872_10010133 3300021361 Unclassified 4495
137 Ga0213876_10000885 3300021384 Bacteria 20042
138 Ga0209646_1000002 3300025246 Bacteria 1425781
139 Ga0209026_1000218 3300025250 Bacteria 79205
140 Ga0209455_1003637 3300025272 Bacteria 5358
141 Ga0207426_1000502 3300025302 Bacteria 58023
142 Ga0207642_10018579 3300025899 Bacteria 2672
143 Ga0207642_10030365 3300025899 Unclassified 2250
144 Ga0207642_10112364 3300025899 Bacteria 1390
145 Ga0207688_10006044 3300025901 Bacteria 6589
146 Ga0207645_10000144 3300025907 Bacteria 55568
147 Ga0207645_10002012 3300025907 Bacteria 16324
148 Ga0207645_10019931 3300025907 Bacteria 4390
149 Ga0207643_10016325 3300025908 Bacteria 4049
150 Ga0207643_10045810 3300025908 Bacteria 2471
151 Ga0207695_10007587 3300025913 Bacteria 13754
152 Ga0207671_10001288 3300025914 Bacteria 29500
153 Ga0207671_10004146 3300025914 Bacteria 14009
154 Ga0207671_10011329 3300025914 Bacteria 7264
155 Ga0207660_10016475 3300025917 Bacteria 4893
156 Ga0207652_10114716 3300025921 Bacteria 2393
157 Ga0207650_10036486 3300025925 Bacteria 3577
158 Ga0207650_10051201 3300025925 Unclassified 3056
159 Ga0207659_10022792 3300025926 Bacteria 4173
160 Ga0207644_10029730 3300025931 Bacteria 3793
161 Ga0207706_10018219 3300025933 Bacteria 6318
162 Ga0207706_10106867 3300025933 Bacteria 2463
163 Ga0207686_10020753 3300025934 Bacteria 3758
164 Ga0207670_10017164 3300025936 Bacteria 4370
165 Ga0207704_10000125 3300025938 Bacteria 41739
166 Ga0207691_10005909 3300025940 Bacteria 11820
167 Ga0207689_10004472 3300025942 Bacteria 12677
168 Ga0207689_10007606 3300025942 Bacteria 9491
169 Ga0207689_10088055 3300025942 Bacteria 2551
170 Ga0207661_10011107 3300025944 Bacteria 6510
171 Ga0207679_10086890 3300025945 Bacteria 2407
172 Ga0207667_10000263 3300025949 Bacteria 73089
173 Ga0207667_10007698 3300025949 Bacteria 12893
174 Ga0207651_10002720 3300025960 Bacteria 8480
175 Ga0207651_10005122 3300025960 Bacteria 6691
176 Ga0207712_10017369 3300025961 Bacteria 4671
177 Ga0207712_10076020 3300025961 Bacteria 2429
178 Ga0207712_10178322 3300025961 Bacteria 1666
179 Ga0207640_10033016 3300025981 Unclassified 3215
180 Ga0207677_10032430 3300026023 Unclassified 3358
181 Ga0207677_10046304 3300026023 Bacteria 2911
182 Ga0207677_10073951 3300026023 Unclassified 2416
183 Ga0207703_10090621 3300026035 Bacteria 2570
184 Ga0207639_10017201 3300026041 Bacteria 5126
185 Ga0207702_10012316 3300026078 Bacteria 7118
186 Ga0207648_10008941 3300026089 Bacteria 9637
187 Ga0207648_10012890 3300026089 Bacteria 7807
188 Ga0207648_10046625 3300026089 Bacteria 3800
189 Ga0207676_10006423 3300026095 Bacteria 8306
190 Ga0207674_10001527 3300026116 Bacteria 29820
191 Ga0207674_10003496 3300026116 Bacteria 19183
192 Ga0207683_10002037 3300026121 Bacteria 17876
193 Ga0207683_10032310 3300026121 Bacteria 4547
194 Ga0207683_10042169 3300026121 Bacteria 3985
195 Ga0207698_10102464 3300026142 Bacteria 2376
196 Ga0268266_10000039 3300028379 Bacteria 324579
197 Ga0268264_10041394 3300028381 Bacteria 3811
198 Ga0307517_10000363 3300028786 Bacteria 78039
199 Ga0265338_10001285 3300028800 Bacteria 41182
200 Ga0265338_10003230 3300028800 Bacteria 23216
201 Ga0307510_10000312 3300033180 Bacteria 44881
202 Ga0373954_0008694 3300035118 Bacteria 4464
203 Ga0373956_0002059 3300035119 Bacteria 8329
204 Ga0373933_0010898 3300035724 Bacteria 4992
205 Ga0373937_0002281 3300036401 Bacteria 16020
206 Ga0373937_0066595 3300036401 Bacteria 3317
207 Ga0395899_0000639 3300037312 Bacteria 36223
208 Ga0395900_0000738 3300037418 Bacteria 43440
209 Ga0395900_0001858 3300037418 Bacteria 24051
210 Ga0395900_0006350 3300037418 Bacteria 12328
211 Ga0395898_0040622 3300037466 Bacteria 4599
212 Ga0395905_0001548 3300037471 Bacteria 27490
213 Ga0395905_0002419 3300037471 Bacteria 20715
214 Ga0395901_0000542 3300038443 Bacteria 43469
215 Ga0395901_0001757 3300038443 Bacteria 22357
216 Ga0436365_1933142 3300039437 Bacteria 64226
217 Ga0436361_0890161 3300039447 Bacteria 6091
218 Ga0453684_0304152 3300044712 Bacteria 1812
219 Ga0495664_0092419 3300046477 Bacteria 1820
220 Ga0495616_0009797 3300046513 Bacteria 5583
221 Ga0495618_0000825 3300046514 Bacteria 21567
222 Ga0495631_0002180 3300046518 Bacteria 11302
223 Ga0495586_0000437 3300046535 Bacteria 25052
224 Ga0495622_0003435 3300046557 Bacteria 7467
225 Ga0495667_0016850 3300046559 Bacteria 4934
226 Ga0495634_0002760 3300046642 Bacteria 14418
227 Ga0495634_0154689 3300046642 Bacteria 1448
228 Ga0495661_0016174 3300046665 Bacteria 4954
229 Ga0495613_0000360 3300046689 Bacteria 40275
230 Ga0495680_0001748 3300047322 Bacteria 23055
231 Ga0495687_002416 3300047443 Bacteria 15041
232 Ga0495686_0000098 3300047472 Bacteria 183131
233 Ga0495686_0018268 3300047472 Bacteria 4709
234 Ga0495686_0143310 3300047472 Bacteria 1408
235 Ga0496110_0011801 3300048913 Bacteria 7172
236 Ga0496114_0118915 3300048917 Bacteria 2271
237 Ga0495678_026159 3300049459 Bacteria 2495
238 Ga0501043_0024846 3300049579 Bacteria 4701
239 Ga0501047_0093138 3300049581 Unclassified 2892
240 nmdc:mga0k408_5752_c2 3300050493 Bacteria 1840
241 Ga0500608_000304 3300053122 Bacteria 18980
242 Ga0500616_0018811 3300053153 Unclassified 3902
243 2929923135 2929921140 Bacteria 8649150
244 8003155970 8003151029 Bacteria 8187759
245 Ga0207705_10000032
246 JGI24740J21852_10003050
247 JGI25154J39366_1000001
248 JGI25406J46586_10001400
249 rootH1_10140045
250 rootH2_10000579
251 rootH1_10192984
252 Ga0070658_10000032
253 Ga0070658_10056076
254 Ga0070676_10000351
255 Ga0070676_10008992
256 Ga0070676_10098946
257 Ga0070683_100052730
258 Ga0070683_100067037
259 Ga0070683_100182184
260 Ga0070690_100003121
261 Ga0070670_100025115
262 Ga0068869_100017213
263 Ga0068869_100200196
264 Ga0070680_100009784
265 Ga0068868_100069761
266 Ga0068868_100082701
267 Ga0068868_100117645
268 Ga0070660_100022601
269 Ga0070661_100021899
270 Ga0070669_100001473
271 Ga0070669_100067846
272 Ga0070675_100011641
273 Ga0070671_100036450
274 Ga0070674_100024103
275 Ga0070674_100137120
276 Ga0070673_100001687
277 Ga0070667_100010511
278 Ga0070667_100094539
279 Ga0070678_100020171
280 Ga0070678_100024245
281 Ga0070662_100031451
282 Ga0068867_100003010
283 Ga0068867_100004842
284 Ga0068867_100029443
285 Ga0070685_10048463
286 Ga0070679_100013479
287 Ga0070679_100180831
288 Ga0070684_100000214
289 Ga0070684_100002052
290 Ga0068853_100019133
291 Ga0070693_100049005
292 Ga0070665_100000012
293 Ga0070665_100017638
294 Ga0068855_100000218
295 Ga0068855_100000621
296 Ga0068855_100280758
297 Ga0070664_100006231
298 Ga0070664_100041601
299 Ga0070664_100090127
300 Ga0068857_100052362
301 Ga0068857_100058553
302 Ga0068854_100013510
303 Ga0068856_100001838
304 Ga0068856_100034440
305 Ga0070702_100059539
306 Ga0068852_100008627
307 Ga0068852_100012048
308 Ga0068852_100113161
309 Ga0068859_100010423
310 Ga0068859_100046239
311 Ga0068866_10008025
312 Ga0068866_10021349
313 Ga0068863_100038293
314 Ga0068858_100141548
315 Ga0068858_100200524
316 Ga0068860_100023712
317 Ga0068860_100024871
318 Ga0068862_100013075
319 Ga0068862_100125373
320 Ga0081539_10000523
321 Ga0097621_100000200
322 Ga0068871_100000174
323 Ga0068871_100010641
324 Ga0068871_100017855
325 Ga0068865_100000100
326 Ga0097620_100010423
327 Ga0097620_100046240
328 Ga0105240_10005758
329 Ga0105240_10016885
330 Ga0105240_10075089
331 Ga0105240_10202270
332 Ga0105240_10335658
333 Ga0105245_10062346
334 Ga0105241_10034234
335 Ga0105242_10009969
336 Ga0105242_10037765
337 Ga0105248_10211781
338 Ga0105237_10001192
339 Ga0105237_10003373
340 Ga0105237_10003465
341 Ga0105238_10011689
342 Ga0105249_10110454
343 Ga0105249_10148962
344 Ga0105239_10000006
345 Ga0105239_10010983
346 Ga0105239_10052740
347 Ga0105239_10061527
348 Ga0105239_10119912
349 Ga0105239_10132029
350 Ga0105246_10009802
351 Ga0105246_10098556
352 Ga0157370_10024710
353 Ga0157374_10001143
354 Ga0157378_10005740
355 Ga0157378_10018598
356 Ga0157378_10035884
357 Ga0163162_10000062
358 Ga0163162_10003037
359 Ga0163162_10163064
360 Ga0163162_10169741
361 Ga0157372_10004167
362 Ga0157375_10009600
363 Ga0157375_10020800
364 Ga0157375_10429718
365 Ga0157375_10430093
366 Ga0163163_10017886
367 Ga0163163_10028229
368 Ga0163163_10261328
369 Ga0157377_10007399
370 Ga0157377_10018217
371 Ga0157377_10025797
372 Ga0157379_10014854
373 Ga0157379_10090257
374 Ga0157379_10105121
375 Ga0157376_10015051
376 Ga0157376_10179652
377 Ga0163161_10028048
378 Ga0163161_10085938
379 Ga0163161_10110948
380 Ga0213872_10010133
381 Ga0213876_10000885
382 Ga0209646_1000002
383 Ga0209026_1000218
384 Ga0209455_1003637
385 Ga0207426_1000502
386 Ga0207642_10018579
387 Ga0207642_10030365
388 Ga0207642_10112364
389 Ga0207688_10006044
390 Ga0207645_10000144
391 Ga0207645_10002012
392 Ga0207645_10019931
393 Ga0207643_10016325
394 Ga0207643_10045810
395 Ga0207695_10007587
396 Ga0207671_10001288
397 Ga0207671_10004146
398 Ga0207671_10011329
399 Ga0207660_10016475
400 Ga0207652_10114716
401 Ga0207650_10036486
402 Ga0207650_10051201
403 Ga0207659_10022792
404 Ga0207644_10029730
405 Ga0207706_10018219
406 Ga0207706_10106867
407 Ga0207686_10020753
408 Ga0207670_10017164
409 Ga0207704_10000125
410 Ga0207691_10005909
411 Ga0207689_10004472
412 Ga0207689_10007606
413 Ga0207689_10088055
414 Ga0207661_10011107
415 Ga0207679_10086890
416 Ga0207667_10000263
417 Ga0207667_10007698
418 Ga0207651_10002720
419 Ga0207651_10005122
420 Ga0207712_10017369
421 Ga0207712_10076020
422 Ga0207712_10178322
423 Ga0207640_10033016
424 Ga0207677_10032430
425 Ga0207677_10046304
426 Ga0207677_10073951
427 Ga0207703_10090621
428 Ga0207639_10017201
429 Ga0207702_10012316
430 Ga0207648_10008941
431 Ga0207648_10012890
432 Ga0207648_10046625
433 Ga0207676_10006423
434 Ga0207674_10001527
435 Ga0207674_10003496
436 Ga0207683_10002037
437 Ga0207683_10032310
438 Ga0207683_10042169
439 Ga0207698_10102464
440 Ga0268266_10000039
441 Ga0268264_10041394
442 Ga0307517_10000363
443 Ga0265338_10001285
444 Ga0265338_10003230
445 Ga0307510_10000312
446 Ga0373954_0008694
447 Ga0373956_0002059
448 Ga0373933_0010898
449 Ga0373937_0002281
450 Ga0373937_0066595
451 Ga0395899_0000639
452 Ga0395900_0000738
453 Ga0395900_0001858
454 Ga0395900_0006350
455 Ga0395898_0040622
456 Ga0395905_0001548
457 Ga0395905_0002419
458 Ga0395901_0000542
459 Ga0395901_0001757
460 Ga0436365_1933142
461 Ga0436361_0890161
462 Ga0453684_0304152
463 Ga0495664_0092419
464 Ga0495616_0009797
465 Ga0495618_0000825
466 Ga0495631_0002180
467 Ga0495586_0000437
468 Ga0495622_0003435
469 Ga0495667_0016850
470 Ga0495634_0002760
471 Ga0495634_0154689
472 Ga0495661_0016174
473 Ga0495613_0000360
474 Ga0495680_0001748
475 Ga0495687_002416
476 Ga0495686_0000098
477 Ga0495686_0018268
478 Ga0495686_0143310
479 Ga0496110_0011801
480 Ga0496114_0118915
481 Ga0495678_026159
482 Ga0501043_0024846
483 Ga0501047_0093138
484 nmdc:mga0k408_5752_c2
485 Ga0500608_000304
486 Ga0500616_0018811
487 2929923135
488 8003155970

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02447

GntP_permease

GntP family permease

58

476

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
7qha-assembly1.cif.gz_B cryo-em structure of the tripartite atp-independent periplasmic (trap) transporter siaqm from photobacterium profundum in amphipol 0.6488 9 438
4f35-assembly2.cif.gz_A crystal structure of a bacterial dicarboxylate/sodium symporter 0.6413 7 437
6ol0-assembly2.cif.gz_B structure of vcindy bound to malate 0.6375 7 441
4r0c-assembly1.cif.gz_D crystal structure of the alcanivorax borkumensis ydah transporter reveals an unusual topology 0.6338 49 439
8thj-assembly1.cif.gz_B cryo-em structure of the tripartite atp-independent periplasmic (trap) transporter siaqm from haemophilus influenzae (antiparallel dimer) 0.6296 1 439
ID Description Score Start End Superfamily
af_I6YCG9_3_406_1.20.1530.20 Mainly Alpha;Up-down Bundle;Na+/H+ antiporter like fold; 0.6661 6 430 1.20.1530.20
af_I6YCG9_3_406_1.20.1530.20 Mainly Alpha;Up-down Bundle;Na+/H+ antiporter like fold; 0.6606 6 430 1.20.1530.20
af_B6UBB1_195_391_1.20.120.1770 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A); 0.3664 143 320 1.20.120.1770
af_Q7F1F1_184_378_1.20.120.1770 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A); 0.3265 144 322 1.20.120.1770
af_B6UBB1_195_391_1.20.120.1770 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A); 0.3258 143 320 1.20.120.1770
ID Description Score Start End GO Terms
AF-C6SCC5-F1-model_v4 Gluconate permease 0.9195 2 363 GO:0005886
GO:0015128
AF-A0A3M5DNH8-F1-model_v4 Gluconate transporter 0.9109 303 441 GO:0005886
GO:0015128
AF-K8Z8H0-F1-model_v4 Gluconate permease 0.8979 42 438 GO:0005886
GO:0015128
AF-A0A4Q3HXW8-F1-model_v4 GntP family permease 0.896 2 360 GO:0005886
GO:0015128
AF-A0A7W6JZ38-F1-model_v4 GntP family gluconate:H+ symporter 0.895 1 439 GO:0005886
GO:0015128

Map