F356606

General Info

Members Datasets Scaffolds Average Seq Length
244 174 244 361

Family's Representative Sequence

Representative Sequence 3300027462|Ga0210000_1006304|Ga0210000_10063042
Length 432
Sequence VPTRRSEKTRVALDRDSTSLSNAGVSLQPQPPPCANCVNLIGAVSVGRFIFPYTITMSSRNGLEVAAAAAATASQLPKFARAPSSVTVAQLQDFDEIIDVRSEDEYAEDHVPDAVNCPVLNNDERARVGTLYKQVSAFEAKKIGAALISANISHHLQQRFHDRPRNWRPLVYCWRGGSRSGAMAHILQQVGWRVGQLDGGYRAYRRQVIADLIEWPRRFEWRAVCGLTGSGKSRLLRALRDSGKQVLDLEELAAHRGSVLGNVPDTPQPSQKMFDSLVWDALRRLSNDKPVYVEAESRKIGALRVPDALIAAMWQAPCVVVEAPMPLRVALLKSEYEHFMADPDDIVAKLKCLSGLYGHDVIERWRRLAYAGHWDELTEDLLIRHYDPAYTRSTLKHYSRLAEAVRVVPDGTDDAAFARLAQRCPASDAGER

Samples

Sample ID Description Type Environment
1 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
15 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
16 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
17 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
18 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
19 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
20 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
21 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
22 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
23 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
24 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
27 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
28 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
29 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
30 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
31 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
32 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
33 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
34 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
35 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
36 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
37 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
38 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
39 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
40 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
41 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
42 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
43 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
44 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
45 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
46 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
47 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
48 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
49 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
50 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
51 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
53 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
54 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
55 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
56 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
57 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
58 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
59 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
60 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
61 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
62 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
63 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
64 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
65 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
66 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
67 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
68 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
69 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300027462 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co PM (SPAdes) (version 2) Metagenome Rhizosphere
107 3300027471 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 AM (SPAdes) (version 2) Metagenome Rhizosphere
108 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
109 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
110 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
111 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
114 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
115 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
116 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
117 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
118 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
119 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
120 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
121 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
122 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
123 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
124 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
125 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
126 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
127 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
128 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
129 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
130 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
131 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
132 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
133 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
134 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
135 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
136 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
137 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
138 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
139 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
140 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
141 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
142 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
145 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
146 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
147 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
148 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
149 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
151 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
152 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
153 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
154 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
155 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
156 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
157 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
158 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
159 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
160 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
161 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
162 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
163 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
164 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
165 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
166 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
167 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
168 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
169 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
170 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
171 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
172 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
173 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
174 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.97
Nodule 0
Rhizoplane 0.82
Rhizosphere 90.98
Stem 0
Stem Tuber 0
Unclassified 1.23

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070676_10042356 3300005328 Bacteria 2643
2 Ga0070676_10042525 3300005328 Bacteria 2639
3 Ga0070683_100151392 3300005329 Bacteria 2200
4 Ga0070690_100003114 3300005330 Bacteria 9026
5 Ga0070677_10045441 3300005333 Bacteria 1752
6 Ga0070666_10068494 3300005335 Bacteria 2412
7 Ga0070680_100161041 3300005336 Bacteria 1886
8 Ga0070680_100248345 3300005336 Bacteria 1504
9 Ga0068868_100003118 3300005338 Bacteria 11539
10 Ga0068868_100110294 3300005338 Bacteria 2235
11 Ga0068868_100151549 3300005338 Bacteria 1909
12 Ga0070689_100057313 3300005340 Bacteria 3023
13 Ga0070687_100051039 3300005343 Bacteria 2139
14 Ga0070661_100138932 3300005344 Bacteria 1830
15 Ga0070671_100002234 3300005355 Bacteria 14949
16 Ga0070671_100010498 3300005355 Bacteria 7433
17 Ga0070674_100016421 3300005356 Bacteria 4639
18 Ga0070674_100098546 3300005356 Bacteria 2125
19 Ga0070659_100205625 3300005366 Bacteria 1622
20 Ga0070667_100027863 3300005367 Bacteria 4702
21 Ga0070701_10005702 3300005438 Bacteria 5172
22 Ga0070694_100235610 3300005444 Bacteria 1379
23 Ga0070678_100001685 3300005456 Bacteria 11856
24 Ga0070662_100048565 3300005457 Bacteria 3057
25 Ga0070681_10360865 3300005458 Bacteria 1363
26 Ga0068867_100002727 3300005459 Bacteria 12450
27 Ga0068867_100204135 3300005459 Bacteria 1584
28 Ga0070685_10032827 3300005466 Bacteria 2910
29 Ga0070707_100084725 3300005468 Bacteria 3063
30 Ga0070679_100175281 3300005530 Bacteria 2117
31 Ga0070679_100199563 3300005530 Bacteria 1967
32 Ga0070684_100026238 3300005535 Bacteria 4906
33 Ga0070665_100338779 3300005548 Bacteria 1508
34 Ga0070665_100352468 3300005548 Bacteria 1477
35 Ga0070704_100055546 3300005549 Bacteria 2808
36 Ga0070704_100074687 3300005549 Bacteria 2474
37 Ga0070704_100279332 3300005549 Bacteria 1383
38 Ga0068855_100054039 3300005563 Bacteria 4723
39 Ga0070664_100004893 3300005564 Bacteria 10730
40 Ga0070664_100236803 3300005564 Bacteria 1638
41 Ga0068854_100099476 3300005578 Bacteria 2178
42 Ga0070702_100004309 3300005615 Bacteria 6486
43 Ga0068852_100246552 3300005616 Bacteria 1710
44 Ga0068859_100108394 3300005617 Bacteria 2839
45 Ga0068864_100001408 3300005618 Bacteria 19888
46 Ga0068861_100075973 3300005719 Bacteria 2616
47 Ga0068858_100002436 3300005842 Bacteria 18817
48 Ga0068862_100176033 3300005844 Bacteria 1918
49 Ga0075365_10051095 3300006038 Bacteria 2729
50 Ga0075368_10043423 3300006042 Bacteria 1771
51 Ga0075364_10011509 3300006051 Bacteria 5376
52 Ga0075432_10009407 3300006058 Bacteria 3327
53 Ga0075362_10008957 3300006177 Bacteria 3848
54 Ga0075367_10060002 3300006178 Bacteria 2266
55 Ga0075369_10069414 3300006186 Bacteria 1550
56 Ga0097621_100003698 3300006237 Bacteria 10583
57 Ga0097621_100098319 3300006237 Bacteria 2458
58 Ga0075370_10090367 3300006353 Bacteria 1766
59 Ga0068871_100001574 3300006358 Bacteria 15332
60 Ga0068871_100017645 3300006358 Bacteria 5405
61 Ga0068871_100091260 3300006358 Bacteria 2538
62 Ga0075431_100002915 3300006847 Bacteria 16563
63 Ga0075429_100015177 3300006880 Bacteria 6677
64 Ga0075429_100063261 3300006880 Bacteria 3224
65 Ga0068865_100029193 3300006881 Bacteria 3657
66 Ga0068865_100051550 3300006881 Bacteria 2849
67 Ga0068865_100060525 3300006881 Bacteria 2651
68 Ga0097620_100108389 3300006931 Bacteria 2839
69 Ga0111539_10038165 3300009094 Bacteria 5795
70 Ga0105245_10064669 3300009098 Bacteria 3306
71 Ga0105245_10121981 3300009098 Bacteria 2436
72 Ga0105243_10008031 3300009148 Bacteria 8102
73 Ga0105241_10031222 3300009174 Bacteria 3988
74 Ga0105248_10030598 3300009177 Bacteria 6012
75 Ga0105248_10059221 3300009177 Bacteria 4301
76 Ga0105248_10156151 3300009177 Bacteria 2575
77 Ga0105237_10043682 3300009545 Bacteria 4514
78 Ga0105237_10047684 3300009545 Bacteria 4306
79 Ga0105249_10407990 3300009553 Bacteria 1390
80 Ga0105239_10137959 3300010375 Bacteria 2716
81 Ga0105239_10251961 3300010375 Bacteria 1983
82 Ga0157374_10012528 3300013296 Bacteria 7382
83 Ga0157374_10036013 3300013296 Bacteria 4531
84 Ga0157378_10002340 3300013297 Bacteria 16832
85 Ga0157378_10009123 3300013297 Bacteria 8631
86 Ga0163162_10142697 3300013306 Bacteria 2509
87 Ga0157375_10138379 3300013308 Bacteria 2560
88 Ga0157375_10211536 3300013308 Bacteria 2097
89 Ga0163163_10337345 3300014325 Bacteria 1562
90 Ga0157377_10023045 3300014745 Bacteria 3295
91 Ga0157379_10024639 3300014968 Bacteria 5341
92 Ga0157379_10100255 3300014968 Bacteria 2599
93 Ga0163161_10105720 3300017792 Bacteria 2100
94 Ga0213872_10001195 3300021361 Bacteria 17622
95 Ga0213876_10033922 3300021384 Bacteria 2691
96 Ga0207697_10004422 3300025315 Bacteria 6721
97 Ga0207697_10015440 3300025315 Bacteria 3156
98 Ga0207682_10000881 3300025893 Bacteria 13921
99 Ga0207682_10047158 3300025893 Bacteria 1773
100 Ga0207642_10001873 3300025899 Bacteria 6485
101 Ga0207680_10092935 3300025903 Bacteria 1923
102 Ga0207645_10000552 3300025907 Bacteria 31081
103 Ga0207645_10048336 3300025907 Bacteria 2716
104 Ga0207645_10053911 3300025907 Bacteria 2569
105 Ga0207645_10148533 3300025907 Bacteria 1529
106 Ga0207643_10023442 3300025908 Bacteria 3402
107 Ga0207684_10030941 3300025910 Bacteria 4555
108 Ga0207671_10113556 3300025914 Bacteria 2063
109 Ga0207662_10043448 3300025918 Bacteria 2651
110 Ga0207652_10188953 3300025921 Bacteria 1852
111 Ga0207681_10004133 3300025923 Bacteria 9001
112 Ga0207650_10042552 3300025925 Bacteria 3332
113 Ga0207659_10042871 3300025926 Bacteria 3174
114 Ga0207644_10008582 3300025931 Bacteria 6684
115 Ga0207644_10105456 3300025931 Bacteria 2123
116 Ga0207706_10015304 3300025933 Bacteria 6935
117 Ga0207706_10094723 3300025933 Bacteria 2627
118 Ga0207706_10170361 3300025933 Bacteria 1913
119 Ga0207686_10084695 3300025934 Bacteria 2077
120 Ga0207686_10224087 3300025934 Bacteria 1359
121 Ga0207709_10017611 3300025935 Bacteria 3989
122 Ga0207670_10093369 3300025936 Bacteria 2132
123 Ga0207669_10004101 3300025937 Bacteria 6381
124 Ga0207704_10011755 3300025938 Bacteria 4323
125 Ga0207704_10308405 3300025938 Bacteria 1216
126 Ga0207691_10002356 3300025940 Bacteria 18498
127 Ga0207691_10002661 3300025940 Bacteria 17455
128 Ga0207691_10243506 3300025940 Bacteria 1554
129 Ga0207711_10207178 3300025941 Bacteria 1791
130 Ga0207689_10020978 3300025942 Bacteria 5491
131 Ga0207689_10298755 3300025942 Unclassified 1335
132 Ga0207679_10009872 3300025945 Bacteria 6129
133 Ga0207668_10237978 3300025972 Bacteria 1471
134 Ga0207640_10078608 3300025981 Bacteria 2246
135 Ga0207658_10151159 3300025986 Bacteria 1892
136 Ga0207677_10002070 3300026023 Bacteria 10561
137 Ga0207703_10012872 3300026035 Bacteria 6524
138 Ga0207639_10197466 3300026041 Bacteria 1723
139 Ga0207641_10230663 3300026088 Bacteria 1720
140 Ga0207648_10004136 3300026089 Bacteria 15010
141 Ga0207648_10036250 3300026089 Bacteria 4344
142 Ga0207648_10058074 3300026089 Bacteria 3375
143 Ga0207648_10126904 3300026089 Bacteria 2245
144 Ga0207676_10019856 3300026095 Bacteria 4908
145 Ga0207674_10024422 3300026116 Bacteria 6460
146 Ga0207675_100003621 3300026118 Bacteria 15062
147 Ga0207683_10002476 3300026121 Bacteria 16110
148 Ga0207683_10003115 3300026121 Bacteria 14487
149 Ga0207683_10015131 3300026121 Bacteria 6567
150 Ga0207698_10006837 3300026142 Bacteria 7136
151 Ga0210000_1006304 3300027462 Bacteria 1727
152 Ga0209995_1002358 3300027471 Bacteria 2982
153 Ga0209971_1012571 3300027682 Bacteria 2004
154 Ga0209813_10006145 3300027866 Bacteria 2953
155 Ga0207428_10001824 3300027907 Bacteria 21809
156 Ga0268266_10159907 3300028379 Bacteria 2037
157 Ga0268264_10027571 3300028381 Bacteria 4643
158 Ga0265318_10001891 3300028577 Bacteria 11741
159 Ga0265324_10000008 3300029957 Bacteria 259947
160 Ga0265324_10006512 3300029957 Bacteria 4853
161 Ga0265330_10039921 3300031235 Bacteria 2084
162 Ga0265332_10005254 3300031238 Bacteria 5988
163 Ga0265328_10007642 3300031239 Bacteria 4496
164 Ga0265325_10000154 3300031241 Bacteria 48571
165 Ga0265331_10003526 3300031250 Bacteria 10053
166 Ga0265314_10016734 3300031711 Bacteria 5778
167 Ga0307516_10059462 3300031730 Bacteria 3717
168 Ga0373932_0015231 3300035112 Bacteria 1947
169 Ga0395900_0102553 3300037418 Bacteria 2939
170 Ga0395905_0030681 3300037471 Bacteria 5063
171 Ga0395905_0135896 3300037471 Bacteria 2313
172 Ga0436365_0919353 3300039437 Bacteria 5894
173 Ga0436361_0687444 3300039447 Bacteria 109830
174 Ga0439449_0020583 3300042007 Bacteria 2472
175 Ga0451577_0000002 3300042876 Bacteria 1731375
176 Ga0451577_0002330 3300042876 Bacteria 22882
177 Ga0451577_0008463 3300042876 Bacteria 10010
178 Ga0451577_0009153 3300042876 Bacteria 9553
179 Ga0451577_0051820 3300042876 Bacteria 3664
180 Ga0466972_0000285 3300044658 Bacteria 31510
181 Ga0453683_0000003 3300044673 Bacteria 942572
182 Ga0453683_0111716 3300044673 Bacteria 1718
183 Ga0466966_0004753 3300044684 Bacteria 8941
184 Ga0453684_0000002 3300044712 Bacteria 1731375
185 Ga0453684_0000029 3300044712 Bacteria 757969
186 Ga0453684_0008886 3300044712 Bacteria 17799
187 Ga0453684_0462501 3300044712 Bacteria 1410
188 Ga0451576_0000004 3300045051 Bacteria 1312238
189 Ga0451576_0005163 3300045051 Bacteria 16525
190 Ga0451576_0005904 3300045051 Bacteria 15195
191 Ga0451576_0007888 3300045051 Bacteria 12611
192 Ga0451576_0010678 3300045051 Bacteria 10520
193 Ga0495643_0002256 3300046522 Bacteria 15640
194 Ga0495652_0086597 3300046529 Bacteria 2571
195 Ga0495661_0014624 3300046665 Bacteria 5256
196 Ga0495687_002125 3300047443 Bacteria 16581
197 Ga0496108_0151487 3300048911 Bacteria 2001
198 Ga0496110_0001082 3300048913 Bacteria 19190
199 Ga0501033_0070000 3300049570 Bacteria 2578
200 Ga0501036_0009903 3300049572 Bacteria 7849
201 Ga0501037_0022579 3300049573 Bacteria 4653
202 Ga0501038_0022129 3300049574 Bacteria 5699
203 Ga0501039_0007260 3300049575 Bacteria 8442
204 Ga0501039_0020423 3300049575 Bacteria 5076
205 Ga0501040_0014896 3300049576 Bacteria 5134
206 Ga0501041_0001497 3300049577 Bacteria 12950
207 Ga0501042_0038293 3300049578 Bacteria 3406
208 Ga0501042_0169505 3300049578 Bacteria 1575
209 Ga0501043_0016858 3300049579 Bacteria 5726
210 Ga0501046_0048620 3300049580 Bacteria 3358
211 Ga0501048_0017637 3300049582 Bacteria 5255
212 Ga0501068_0035050 3300049584 Bacteria 2994
213 Ga0501068_0060976 3300049584 Bacteria 2291
214 Ga0501071_0000842 3300049587 Bacteria 16445
215 Ga0501071_0101279 3300049587 Bacteria 2123
216 Ga0501072_0003338 3300049588 Bacteria 12073
217 Ga0501072_0365552 3300049588 Bacteria 1145
218 Ga0501075_0004871 3300049591 Bacteria 9147
219 Ga0501075_0020959 3300049591 Bacteria 4762
220 Ga0501076_0001756 3300049592 Bacteria 14654
221 Ga0501076_0018104 3300049592 Bacteria 5364
222 Ga0501077_0061428 3300049593 Bacteria 2384
223 Ga0501079_0000427 3300049741 Bacteria 27413
224 Ga0501079_0055236 3300049741 Bacteria 3064
225 Ga0501080_0020343 3300049742 Bacteria 6142
226 Ga0501081_0025366 3300049743 Bacteria 3987
227 Ga0501081_0076473 3300049743 Bacteria 2338
228 Ga0501045_0002091 3300049824 Bacteria 13492
229 Ga0501045_0030505 3300049824 Bacteria 3903
230 nmdc:mga03683_11687_c1 3300050489 Bacteria 3187
231 nmdc:mga03n38_643_c1 3300050490 Bacteria 8955
232 nmdc:mga00v17_34481_c1 3300050491 Bacteria 3007
233 nmdc:mga0k408_63614_c1 3300050493 Bacteria 2146
234 nmdc:mga06z11_21743_c1 3300050494 Bacteria 2985
235 nmdc:mga0qj67_8716_c1 3300050509 Bacteria 7532
236 nmdc:mga08y16_3298_c1 3300050511 Bacteria 16712
237 nmdc:mga0sz30_8940_c1 3300050516 Bacteria 3797
238 Ga0500646_0000480 3300053090 Bacteria 11731
239 Ga0500583_0005524 3300053092 Bacteria 4248
240 Ga0500604_0000094 3300053151 Bacteria 28414
241 Ga0501084_0148135 3300054114 Bacteria 1977
242 Ga0501082_0007524 3300060353 Bacteria 9399
243 Ga0530510_0000126 3300061734 Bacteria 44298
244 Ga0530510_0038725 3300061734 Bacteria 3443

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005444 Ga0070694_100235610 Ga0070694_1002356101 345
2 3300006058 Ga0075432_10009407 Ga0075432_100094073 346
3 3300029957 Ga0265324_10000008 Ga0265324_1000000845 346
4 3300029957 Ga0265324_10006512 Ga0265324_100065123 346
5 3300031241 Ga0265325_10000154 Ga0265325_1000015414 346
6 3300042876 Ga0451577_0000002 Ga0451577_0000002_467035_468075 346
7 3300044673 Ga0453683_0000003 Ga0453683_0000003_467035_468075 346
8 3300044712 Ga0453684_0000002 Ga0453684_0000002_1263301_1264341 346
9 3300044712 Ga0453684_0462501 Ga0453684_0462501_101_1141 346
10 3300045051 Ga0451576_0000004 Ga0451576_0000004_889941_890981 346
11 3300042876 Ga0451577_0002330 Ga0451577_0002330_14306_15349 347
12 3300042876 Ga0451577_0009153 Ga0451577_0009153_1402_2445 347
13 3300044712 Ga0453684_0008886 Ga0453684_0008886_6116_7159 347
14 3300045051 Ga0451576_0005904 Ga0451576_0005904_5189_6232 347
15 3300045051 Ga0451576_0007888 Ga0451576_0007888_10047_11090 347
16 3300045051 Ga0451576_0010678 Ga0451576_0010678_1516_2559 347
17 3300005549 Ga0070704_100074687 Ga0070704_1000746873 348
18 3300005338 Ga0068868_100151549 Ga0068868_1001515492 349
19 3300006042 Ga0075368_10043423 Ga0075368_100434232 349
20 3300006051 Ga0075364_10011509 Ga0075364_100115093 349
21 3300006177 Ga0075362_10008957 Ga0075362_100089573 349
22 3300006178 Ga0075367_10060002 Ga0075367_100600021 349
23 3300006353 Ga0075370_10090367 Ga0075370_100903672 349
24 3300006880 Ga0075429_100015177 Ga0075429_1000151775 349
25 3300027866 Ga0209813_10006145 Ga0209813_100061454 349
26 3300027907 Ga0207428_10001824 Ga0207428_1000182417 349
27 3300035112 Ga0373932_0015231 Ga0373932_0015231_777_1826 349
28 3300037418 Ga0395900_0102553 Ga0395900_0102553_710_1771 349
29 3300037471 Ga0395905_0030681 Ga0395905_0030681_3353_4414 349
30 3300042007 Ga0439449_0020583 Ga0439449_0020583_852_1910 349
31 3300044658 Ga0466972_0000285 Ga0466972_0000285_24338_25399 349
32 3300044712 Ga0453684_0000029 Ga0453684_0000029_737653_738702 349
33 3300050489 nmdc:mga03683_11687_c1 nmdc:mga03683_11687_c1_1639_2688 349
34 3300050490 nmdc:mga03n38_643_c1 nmdc:mga03n38_643_c1_2710_3759 349
35 3300050491 nmdc:mga00v17_34481_c1 nmdc:mga00v17_34481_c1_787_1836 349
36 3300050494 nmdc:mga06z11_21743_c1 nmdc:mga06z11_21743_c1_1492_2541 349
37 3300050511 nmdc:mga08y16_3298_c1 nmdc:mga08y16_3298_c1_9920_10969 349
38 3300005328 Ga0070676_10042525 Ga0070676_100425252 350
39 3300005329 Ga0070683_100151392 Ga0070683_1001513922 350
40 3300005333 Ga0070677_10045441 Ga0070677_100454412 350
41 3300005335 Ga0070666_10068494 Ga0070666_100684942 350
42 3300005336 Ga0070680_100248345 Ga0070680_1002483452 350
43 3300005338 Ga0068868_100003118 Ga0068868_1000031187 350
44 3300005355 Ga0070671_100002234 Ga0070671_10000223416 350
45 3300005356 Ga0070674_100098546 Ga0070674_1000985462 350
46 3300005367 Ga0070667_100027863 Ga0070667_1000278635 350
47 3300005468 Ga0070707_100084725 Ga0070707_1000847252 350
48 3300005530 Ga0070679_100175281 Ga0070679_1001752812 350
49 3300005535 Ga0070684_100026238 Ga0070684_1000262382 350
50 3300005564 Ga0070664_100004893 Ga0070664_10000489310 350
51 3300005578 Ga0068854_100099476 Ga0068854_1000994762 350
52 3300005618 Ga0068864_100001408 Ga0068864_1000014082 350
53 3300005844 Ga0068862_100176033 Ga0068862_1001760332 350
54 3300006038 Ga0075365_10051095 Ga0075365_100510953 350
55 3300006186 Ga0075369_10069414 Ga0075369_100694142 350
56 3300006237 Ga0097621_100098319 Ga0097621_1000983192 350
57 3300006358 Ga0068871_100001574 Ga0068871_1000015742 350
58 3300006881 Ga0068865_100051550 Ga0068865_1000515502 350
59 3300009098 Ga0105245_10064669 Ga0105245_100646692 350
60 3300009177 Ga0105248_10156151 Ga0105248_101561512 350
61 3300013296 Ga0157374_10036013 Ga0157374_100360132 350
62 3300013297 Ga0157378_10002340 Ga0157378_1000234017 350
63 3300013306 Ga0163162_10142697 Ga0163162_101426972 350
64 3300013308 Ga0157375_10211536 Ga0157375_102115361 350
65 3300014325 Ga0163163_10337345 Ga0163163_103373451 350
66 3300014745 Ga0157377_10023045 Ga0157377_100230453 350
67 3300021361 Ga0213872_10001195 Ga0213872_1000119511 350
68 3300025893 Ga0207682_10047158 Ga0207682_100471582 350
69 3300025903 Ga0207680_10092935 Ga0207680_100929352 350
70 3300025907 Ga0207645_10053911 Ga0207645_100539112 350
71 3300025910 Ga0207684_10030941 Ga0207684_100309412 350
72 3300025925 Ga0207650_10042552 Ga0207650_100425524 350
73 3300025931 Ga0207644_10105456 Ga0207644_101054562 350
74 3300025933 Ga0207706_10170361 Ga0207706_101703612 350
75 3300025940 Ga0207691_10002661 Ga0207691_1000266117 350
76 3300025941 Ga0207711_10207178 Ga0207711_102071782 350
77 3300025942 Ga0207689_10298755 Ga0207689_102987551 350
78 3300025945 Ga0207679_10009872 Ga0207679_100098722 350
79 3300025981 Ga0207640_10078608 Ga0207640_100786081 350
80 3300025986 Ga0207658_10151159 Ga0207658_101511592 350
81 3300026023 Ga0207677_10002070 Ga0207677_100020707 350
82 3300026089 Ga0207648_10036250 Ga0207648_100362502 350
83 3300026095 Ga0207676_10019856 Ga0207676_100198565 350
84 3300026121 Ga0207683_10002476 Ga0207683_1000247616 350
85 3300026142 Ga0207698_10006837 Ga0207698_100068377 350
86 3300039447 Ga0436361_0687444 Ga0436361_0687444_39335_40399 350
87 3300042876 Ga0451577_0008463 Ga0451577_0008463_3027_4097 350
88 3300042876 Ga0451577_0051820 Ga0451577_0051820_1318_2394 350
89 3300045051 Ga0451576_0005163 Ga0451576_0005163_11381_12457 350
90 3300046529 Ga0495652_0086597 Ga0495652_0086597_1334_2392 350
91 3300048911 Ga0496108_0151487 Ga0496108_0151487_790_1923 350
92 3300048913 Ga0496110_0001082 Ga0496110_0001082_2782_3915 350
93 3300050493 nmdc:mga0k408_63614_c1 nmdc:mga0k408_63614_c1_314_1366 350
94 3300050516 nmdc:mga0sz30_8940_c1 nmdc:mga0sz30_8940_c1_317_1381 350
95 3300009545 Ga0105237_10043682 Ga0105237_100436824 351
96 3300049573 Ga0501037_0022579 Ga0501037_0022579_2620_3699 351
97 3300049575 Ga0501039_0007260 Ga0501039_0007260_5446_6525 351
98 3300049577 Ga0501041_0001497 Ga0501041_0001497_1248_2327 351
99 3300049578 Ga0501042_0038293 Ga0501042_0038293_2137_3216 351
100 3300049579 Ga0501043_0016858 Ga0501043_0016858_2475_3554 351
101 3300049584 Ga0501068_0035050 Ga0501068_0035050_1090_2169 351
102 3300049587 Ga0501071_0000842 Ga0501071_0000842_12632_13711 351
103 3300049591 Ga0501075_0020959 Ga0501075_0020959_551_1630 351
104 3300049592 Ga0501076_0018104 Ga0501076_0018104_1165_2244 351
105 3300049741 Ga0501079_0000427 Ga0501079_0000427_23805_24884 351
106 3300049743 Ga0501081_0076473 Ga0501081_0076473_418_1500 351
107 3300049824 Ga0501045_0030505 Ga0501045_0030505_1070_2149 351
108 3300061734 Ga0530510_0038725 Ga0530510_0038725_1678_2760 351
109 3300006847 Ga0075431_100002915 Ga0075431_1000029155 353
110 3300006880 Ga0075429_100063261 Ga0075429_1000632612 353
111 3300053090 Ga0500646_0000480 Ga0500646_0000480_6421_7491 353
112 3300053092 Ga0500583_0005524 Ga0500583_0005524_2898_3968 353
113 3300053151 Ga0500604_0000094 Ga0500604_0000094_8277_9347 353
114 3300005366 Ga0070659_100205625 Ga0070659_1002056252 354
115 3300005459 Ga0068867_100204135 Ga0068867_1002041351 354
116 3300005548 Ga0070665_100352468 Ga0070665_1003524682 354
117 3300005549 Ga0070704_100055546 Ga0070704_1000555461 354
118 3300005563 Ga0068855_100054039 Ga0068855_1000540395 354
119 3300009174 Ga0105241_10031222 Ga0105241_100312224 354
120 3300009545 Ga0105237_10047684 Ga0105237_100476844 354
121 3300010375 Ga0105239_10137959 Ga0105239_101379593 354
122 3300010375 Ga0105239_10251961 Ga0105239_102519611 354
123 3300013308 Ga0157375_10138379 Ga0157375_101383792 354
124 3300025907 Ga0207645_10148533 Ga0207645_101485331 354
125 3300025914 Ga0207671_10113556 Ga0207671_101135562 354
126 3300025934 Ga0207686_10224087 Ga0207686_102240871 354
127 3300025938 Ga0207704_10308405 Ga0207704_103084051 354
128 3300026089 Ga0207648_10058074 Ga0207648_100580744 354
129 3300028379 Ga0268266_10159907 Ga0268266_101599071 354
130 3300021384 Ga0213876_10033922 Ga0213876_100339223 355
131 3300031730 Ga0307516_10059462 Ga0307516_100594625 355
132 3300039437 Ga0436365_0919353 Ga0436365_0919353_3854_4942 355
133 3300044673 Ga0453683_0111716 Ga0453683_0111716_155_1231 355
134 3300050509 nmdc:mga0qj67_8716_c1 nmdc:mga0qj67_8716_c1_1775_2878 355
135 3300005456 Ga0070678_100001685 Ga0070678_1000016852 356
136 3300005459 Ga0068867_100002727 Ga0068867_1000027271 356
137 3300005530 Ga0070679_100199563 Ga0070679_1001995631 356
138 3300005548 Ga0070665_100338779 Ga0070665_1003387792 356
139 3300005616 Ga0068852_100246552 Ga0068852_1002465522 356
140 3300005617 Ga0068859_100108394 Ga0068859_1001083944 356
141 3300005842 Ga0068858_100002436 Ga0068858_10000243612 356
142 3300006237 Ga0097621_100003698 Ga0097621_1000036989 356
143 3300006358 Ga0068871_100017645 Ga0068871_1000176454 356
144 3300006881 Ga0068865_100029193 Ga0068865_1000291932 356
145 3300006931 Ga0097620_100108389 Ga0097620_1001083894 356
146 3300009177 Ga0105248_10030598 Ga0105248_100305986 356
147 3300013296 Ga0157374_10012528 Ga0157374_100125286 356
148 3300014968 Ga0157379_10024639 Ga0157379_100246393 356
149 3300025315 Ga0207697_10015440 Ga0207697_100154402 356
150 3300025907 Ga0207645_10000552 Ga0207645_1000055221 356
151 3300025921 Ga0207652_10188953 Ga0207652_101889532 356
152 3300025923 Ga0207681_10004133 Ga0207681_100041337 356
153 3300025933 Ga0207706_10094723 Ga0207706_100947233 356
154 3300025938 Ga0207704_10011755 Ga0207704_100117553 356
155 3300025940 Ga0207691_10002356 Ga0207691_100023566 356
156 3300026035 Ga0207703_10012872 Ga0207703_100128724 356
157 3300026041 Ga0207639_10197466 Ga0207639_101974662 356
158 3300026089 Ga0207648_10004136 Ga0207648_100041362 356
159 3300026121 Ga0207683_10003115 Ga0207683_1000311515 356
160 3300037471 Ga0395905_0135896 Ga0395905_0135896_316_1401 356
161 3300044684 Ga0466966_0004753 Ga0466966_0004753_3513_4604 356
162 3300046522 Ga0495643_0002256 Ga0495643_0002256_12683_13774 356
163 3300046665 Ga0495661_0014624 Ga0495661_0014624_298_1389 356
164 3300047443 Ga0495687_002125 Ga0495687_002125_13970_15061 356
165 3300049570 Ga0501033_0070000 Ga0501033_0070000_349_1419 356
166 3300049572 Ga0501036_0009903 Ga0501036_0009903_3767_4837 356
167 3300049574 Ga0501038_0022129 Ga0501038_0022129_1052_2122 356
168 3300049575 Ga0501039_0020423 Ga0501039_0020423_514_1584 356
169 3300049576 Ga0501040_0014896 Ga0501040_0014896_977_2047 356
170 3300049578 Ga0501042_0169505 Ga0501042_0169505_471_1541 356
171 3300049580 Ga0501046_0048620 Ga0501046_0048620_847_1917 356
172 3300049582 Ga0501048_0017637 Ga0501048_0017637_888_1958 356
173 3300049584 Ga0501068_0060976 Ga0501068_0060976_250_1320 356
174 3300049587 Ga0501071_0101279 Ga0501071_0101279_708_1778 356
175 3300049588 Ga0501072_0003338 Ga0501072_0003338_5401_6471 356
176 3300049588 Ga0501072_0365552 Ga0501072_0365552_46_1119 356
177 3300049591 Ga0501075_0004871 Ga0501075_0004871_1559_2629 356
178 3300049592 Ga0501076_0001756 Ga0501076_0001756_1376_2446 356
179 3300049593 Ga0501077_0061428 Ga0501077_0061428_1050_2120 356
180 3300049741 Ga0501079_0055236 Ga0501079_0055236_1023_2093 356
181 3300049742 Ga0501080_0020343 Ga0501080_0020343_330_1400 356
182 3300049743 Ga0501081_0025366 Ga0501081_0025366_2318_3388 356
183 3300049824 Ga0501045_0002091 Ga0501045_0002091_3416_4486 356
184 3300054114 Ga0501084_0148135 Ga0501084_0148135_897_1967 356
185 3300060353 Ga0501082_0007524 Ga0501082_0007524_6322_7392 356
186 3300061734 Ga0530510_0000126 Ga0530510_0000126_4611_5681 356
187 3300027462 Ga0210000_1006304 Ga0210000_10063042 357
188 3300027471 Ga0209995_1002358 Ga0209995_10023584 357
189 3300027682 Ga0209971_1012571 Ga0209971_10125712 357
190 3300005336 Ga0070680_100161041 Ga0070680_1001610412 359
191 3300005328 Ga0070676_10042356 Ga0070676_100423562 360
192 3300005330 Ga0070690_100003114 Ga0070690_1000031146 360
193 3300005338 Ga0068868_100110294 Ga0068868_1001102942 360
194 3300005340 Ga0070689_100057313 Ga0070689_1000573134 360
195 3300005343 Ga0070687_100051039 Ga0070687_1000510392 360
196 3300005344 Ga0070661_100138932 Ga0070661_1001389322 360
197 3300005355 Ga0070671_100010498 Ga0070671_1000104986 360
198 3300005356 Ga0070674_100016421 Ga0070674_1000164214 360
199 3300005438 Ga0070701_10005702 Ga0070701_100057025 360
200 3300005457 Ga0070662_100048565 Ga0070662_1000485652 360
201 3300005458 Ga0070681_10360865 Ga0070681_103608651 360
202 3300005466 Ga0070685_10032827 Ga0070685_100328271 360
203 3300005549 Ga0070704_100279332 Ga0070704_1002793321 360
204 3300005564 Ga0070664_100236803 Ga0070664_1002368031 360
205 3300005615 Ga0070702_100004309 Ga0070702_1000043095 360
206 3300005719 Ga0068861_100075973 Ga0068861_1000759731 360
207 3300006358 Ga0068871_100091260 Ga0068871_1000912602 360
208 3300006881 Ga0068865_100060525 Ga0068865_1000605252 360
209 3300009094 Ga0111539_10038165 Ga0111539_100381651 360
210 3300009098 Ga0105245_10121981 Ga0105245_101219813 360
211 3300009148 Ga0105243_10008031 Ga0105243_100080318 360
212 3300009177 Ga0105248_10059221 Ga0105248_100592212 360
213 3300009553 Ga0105249_10407990 Ga0105249_104079902 360
214 3300013297 Ga0157378_10009123 Ga0157378_100091236 360
215 3300014968 Ga0157379_10100255 Ga0157379_101002552 360
216 3300017792 Ga0163161_10105720 Ga0163161_101057202 360
217 3300025315 Ga0207697_10004422 Ga0207697_100044223 360
218 3300025893 Ga0207682_10000881 Ga0207682_100008819 360
219 3300025899 Ga0207642_10001873 Ga0207642_100018736 360
220 3300025907 Ga0207645_10048336 Ga0207645_100483362 360
221 3300025908 Ga0207643_10023442 Ga0207643_100234423 360
222 3300025918 Ga0207662_10043448 Ga0207662_100434481 360
223 3300025926 Ga0207659_10042871 Ga0207659_100428712 360
224 3300025931 Ga0207644_10008582 Ga0207644_100085826 360
225 3300025933 Ga0207706_10015304 Ga0207706_100153045 360
226 3300025934 Ga0207686_10084695 Ga0207686_100846952 360
227 3300025935 Ga0207709_10017611 Ga0207709_100176112 360
228 3300025936 Ga0207670_10093369 Ga0207670_100933692 360
229 3300025937 Ga0207669_10004101 Ga0207669_100041012 360
230 3300025940 Ga0207691_10243506 Ga0207691_102435062 360
231 3300025942 Ga0207689_10020978 Ga0207689_100209784 360
232 3300025972 Ga0207668_10237978 Ga0207668_102379781 360
233 3300026088 Ga0207641_10230663 Ga0207641_102306632 360
234 3300026089 Ga0207648_10126904 Ga0207648_101269042 360
235 3300026116 Ga0207674_10024422 Ga0207674_100244225 360
236 3300026118 Ga0207675_100003621 Ga0207675_1000036213 360
237 3300026121 Ga0207683_10015131 Ga0207683_100151316 360
238 3300028381 Ga0268264_10027571 Ga0268264_100275714 360
239 3300028577 Ga0265318_10001891 Ga0265318_100018918 360
240 3300031235 Ga0265330_10039921 Ga0265330_100399212 360
241 3300031238 Ga0265332_10005254 Ga0265332_100052543 360
242 3300031239 Ga0265328_10007642 Ga0265328_100076424 360
243 3300031250 Ga0265331_10003526 Ga0265331_100035269 360
244 3300031711 Ga0265314_10016734 Ga0265314_100167344 360

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00581

Rhodanese

Rhodanese-like domain

85

207

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
3nt6-assembly1.cif.gz_B structure of the shewanella loihica pv-4 nadh-dependent persulfide reductase c43s/c531s double mutant 0.8261 10 132
3gk5-assembly1.cif.gz_A crystal structure of rhodanese-related protein (tvg0868615) from thermoplasma volcanium, northeast structural genomics consortium target tvr109a 0.8252 9 132
3ntd-assembly1.cif.gz_A structure of the shewanella loihica pv-4 nadh-dependent persulfide reductase c531s mutant 0.8224 11 132
3g5j-assembly2.cif.gz_B crystal structure of n-terminal domain of putative atp/gtp binding protein from clostridium difficile 630 0.8144 10 134
5ve4-assembly1.cif.gz_A crystal structure of persulfide dioxygenase-rhodanese fusion protein with rhodanese domain inactivating mutation (c314s) from burkholderia phytofirmans 0.8125 14 132
ID Description Score Start End Superfamily
af_Q60359_91_222_3.40.250.10 Alpha Beta;3-Layer(aba) Sandwich;Oxidized Rhodanese; domain 1;Rhodanese-like domain 0.8902 9 134 3.40.250.10
af_Q60360_6_175_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8656 143 301 3.40.50.300
af_Q60359_91_222_3.40.250.10 Alpha Beta;3-Layer(aba) Sandwich;Oxidized Rhodanese; domain 1;Rhodanese-like domain 0.8468 9 134 3.40.250.10
af_B4FDW3_188_303_3.40.250.10 Alpha Beta;3-Layer(aba) Sandwich;Oxidized Rhodanese; domain 1;Rhodanese-like domain 0.8261 8 131 3.40.250.10
3gk5A00 Alpha Beta;3-Layer(aba) Sandwich;Oxidized Rhodanese; domain 1;Rhodanese-like domain 0.8252 9 132 3.40.250.10
ID Description Score Start End GO Terms
AF-A0A838JKT2-F1-model_v4 tRNA 2-selenouridine(34) synthase MnmH 0.9908 19 97 GO:0002098
GO:0043828
AF-G5J3S5-F1-model_v4 Selenophosphate-dependent tRNA 2-selenouridine synthase 0.9849 20 131 GO:0002098
GO:0004792
GO:0043828
AF-A0A431I7N3-F1-model_v4 tRNA 2-selenouridine(34) synthase MnmH 0.9835 127 352 GO:0002098
GO:0043828
AF-A0A1Q3WVL0-F1-model_v4 tRNA 2-selenouridine(34) synthase MnmH 0.983 11 243 GO:0002098
GO:0043828
AF-A0A5C7RTW9-F1-model_v4 deleted 0.9823 11 352

Feature Viewer

pLDDT pTM Quality
91.14 0.89 High
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Predicted Structure (AlphaFold2)

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