F356730

General Info

Members Datasets Scaffolds Average Seq Length
244 122 244 407

Family's Representative Sequence

Representative Sequence 3300044712|Ga0453684_0178649|Ga0453684_0178649_987_2318
Length 443
Sequence MPTFHYKAIQPDGKVTHGELEAGGRADAFRLMEGRRLRPISLSERVNGSGAKAAPAKKASVKPAARPAERADKAETKPDKATGPVPGLNLKLPFGGGKINARVLENFTRLLASLLAAGVPLSRALVILQKEAANPVAREKWKEIYDLVVDGMTLADSMAKSPEVFPRVYVAMVEAGETGGFLDVVLGQIADFQAREKEMRSKVMTAMLYPLILLVLAIGVLTFLLVFFVPRFQKIFDGFPNAHLPALTQFIIGTSHVLRSYGVLVAIGGVIVVIMVRSWFTSETGRRSWEGGILRLPTIGPLVAQFAMARFCRMLGTLLGAGVPLINALNVGRRSIGNQILVDAVSNSIDQVKEGKALGLSLGECRTLFSGSTIEMISVAEESGRLDQELVRIANVTESDLDRQLKTAVAMAEPLMLFFIAGFIGVIFIGMVLPIFTLQDYIK

Samples

Sample ID Description Type Environment
1 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
6 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
7 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
8 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
9 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
10 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
11 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
12 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
13 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
14 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
15 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
16 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
17 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
18 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
19 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
20 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
21 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
22 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
23 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
24 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
25 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
26 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
27 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
28 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
29 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
30 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
31 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
32 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
33 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
34 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
35 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
51 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
52 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
53 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
54 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
55 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
56 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
57 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
58 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
59 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
60 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
61 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
62 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
63 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
64 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
65 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
66 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
67 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
68 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
69 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
70 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
71 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
72 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
73 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
74 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
75 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
76 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
77 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
78 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
79 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
80 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
81 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
82 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
83 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
84 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
85 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
86 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
87 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
88 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
89 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
90 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
91 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
92 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
93 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
94 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
95 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
96 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
97 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
98 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
99 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
100 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
101 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
102 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
103 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
104 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
105 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
106 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
107 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
108 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
109 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
110 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
111 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
112 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
113 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
114 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
115 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
116 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
117 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
118 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
119 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
120 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
121 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
122 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.41
Rhizosphere 98.77
Stem 0
Stem Tuber 0
Unclassified 0.82

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10109345 3300003320 Bacteria 3042
2 Ga0070658_10044245 3300005327 Bacteria 3598
3 Ga0070658_10161498 3300005327 Unclassified 1880
4 Ga0070683_100005840 3300005329 Bacteria 10297
5 Ga0070683_100163051 3300005329 Bacteria 2115
6 Ga0070680_100036769 3300005336 Unclassified 3956
7 Ga0070689_100002222 3300005340 Bacteria 12590
8 Ga0070689_100016643 3300005340 Bacteria 5382
9 Ga0070689_100102975 3300005340 Bacteria 2262
10 Ga0070701_10002294 3300005438 Bacteria 7331
11 Ga0070711_100060874 3300005439 Bacteria 2626
12 Ga0070705_100046606 3300005440 Bacteria 2500
13 Ga0070694_100005926 3300005444 Bacteria 7407
14 Ga0070681_10061897 3300005458 Bacteria 3716
15 Ga0070679_100142678 3300005530 Bacteria 2374
16 Ga0070684_100142735 3300005535 Bacteria 2166
17 Ga0070686_100017927 3300005544 Bacteria 4146
18 Ga0070686_100031126 3300005544 Bacteria 3260
19 Ga0070686_100038674 3300005544 Bacteria 2967
20 Ga0070665_100276080 3300005548 Bacteria 1682
21 Ga0068855_100051154 3300005563 Bacteria 4866
22 Ga0068855_100191200 3300005563 Unclassified 2309
23 Ga0068857_100026967 3300005577 Bacteria 5067
24 Ga0068856_100000293 3300005614 Bacteria 54873
25 Ga0068856_100013644 3300005614 Bacteria 7859
26 Ga0068856_100048903 3300005614 Bacteria 4168
27 Ga0068863_100033957 3300005841 Bacteria 4860
28 Ga0068863_100168036 3300005841 Bacteria 2104
29 Ga0068858_100072445 3300005842 Bacteria 3196
30 Ga0068858_100161705 3300005842 Unclassified 2108
31 Ga0068860_100000236 3300005843 Bacteria 84807
32 Ga0068862_100180012 3300005844 Bacteria 1897
33 Ga0081455_10217131 3300005937 Bacteria 1420
34 Ga0070717_10000164 3300006028 Bacteria 50120
35 Ga0070717_10134891 3300006028 Bacteria 2125
36 Ga0097621_100194176 3300006237 Bacteria 1759
37 Ga0075431_100144340 3300006847 Unclassified 2453
38 Ga0075434_100115245 3300006871 Bacteria 2700
39 Ga0075436_100040248 3300006914 Bacteria 3226
40 Ga0075435_100203826 3300007076 Unclassified 1676
41 Ga0105240_10015035 3300009093 Bacteria 10538
42 Ga0105240_10142072 3300009093 Unclassified 2869
43 Ga0105240_10164871 3300009093 Bacteria 2629
44 Ga0105240_10214978 3300009093 Bacteria 2244
45 Ga0105237_10010621 3300009545 Bacteria 9780
46 Ga0105238_10002943 3300009551 Bacteria 16997
47 Ga0105238_10030561 3300009551 Bacteria 5483
48 Ga0157378_10046194 3300013297 Unclassified 3871
49 Ga0157375_10000051 3300013308 Bacteria 130143
50 Ga0163163_10000096 3300014325 Bacteria 93313
51 Ga0163163_10041976 3300014325 Bacteria 4477
52 Ga0163163_10133662 3300014325 Bacteria 2521
53 Ga0207680_10100702 3300025903 Unclassified 1856
54 Ga0207705_10021292 3300025909 Bacteria 4626
55 Ga0207705_10086017 3300025909 Bacteria 2297
56 Ga0207707_10087072 3300025912 Unclassified 2729
57 Ga0207695_10000339 3300025913 Bacteria 110246
58 Ga0207695_10039002 3300025913 Bacteria 5108
59 Ga0207695_10153935 3300025913 Bacteria 2235
60 Ga0207695_10177369 3300025913 Bacteria 2053
61 Ga0207695_10308806 3300025913 Unclassified 1472
62 Ga0207671_10005925 3300025914 Bacteria 11082
63 Ga0207663_10115913 3300025916 Bacteria 1826
64 Ga0207694_10003949 3300025924 Bacteria 11701
65 Ga0207694_10014784 3300025924 Bacteria 5886
66 Ga0207670_10000702 3300025936 Bacteria 17671
67 Ga0207670_10004008 3300025936 Bacteria 7867
68 Ga0207670_10094181 3300025936 Bacteria 2124
69 Ga0207667_10034418 3300025949 Bacteria 5439
70 Ga0207667_10158134 3300025949 Bacteria 2332
71 Ga0207703_10055437 3300026035 Bacteria 3225
72 Ga0207703_10240951 3300026035 Unclassified 1626
73 Ga0207702_10003426 3300026078 Bacteria 14497
74 Ga0207702_10017955 3300026078 Bacteria 5853
75 Ga0207702_10026991 3300026078 Bacteria 4768
76 Ga0207641_10052930 3300026088 Bacteria 3439
77 Ga0207641_10166272 3300026088 Bacteria 2009
78 Ga0207676_10334914 3300026095 Bacteria 1394
79 Ga0207674_10036764 3300026116 Bacteria 5098
80 Ga0268264_10000508 3300028381 Bacteria 50098
81 Ga0265337_1000018 3300028556 Bacteria 76481
82 Ga0265337_1000883 3300028556 Bacteria 15760
83 Ga0265337_1012220 3300028556 Bacteria 2926
84 Ga0265337_1014273 3300028556 Unclassified 2637
85 Ga0265337_1018459 3300028556 Bacteria 2215
86 Ga0265337_1026485 3300028556 Bacteria 1756
87 Ga0265326_10010419 3300028558 Bacteria 2756
88 Ga0265319_1002970 3300028563 Bacteria 9020
89 Ga0265319_1006603 3300028563 Bacteria 5353
90 Ga0265334_10012375 3300028573 Bacteria 3586
91 Ga0265334_10014221 3300028573 Bacteria 3318
92 Ga0265334_10029578 3300028573 Bacteria 2196
93 Ga0265318_10000002 3300028577 Bacteria 428208
94 Ga0265318_10033754 3300028577 Unclassified 1974
95 Ga0265323_10000016 3300028653 Bacteria 96953
96 Ga0265323_10000320 3300028653 Bacteria 27737
97 Ga0265323_10001774 3300028653 Bacteria 10242
98 Ga0265323_10014959 3300028653 Bacteria 3058
99 Ga0265322_10000232 3300028654 Bacteria 24091
100 Ga0265336_10015955 3300028666 Bacteria 2461
101 Ga0265336_10022963 3300028666 Bacteria 1983
102 Ga0265338_10000237 3300028800 Bacteria 101850
103 Ga0265338_10000294 3300028800 Bacteria 90033
104 Ga0265338_10000398 3300028800 Bacteria 77989
105 Ga0265338_10001023 3300028800 Bacteria 46910
106 Ga0265338_10001986 3300028800 Bacteria 31807
107 Ga0265338_10002169 3300028800 Bacteria 30159
108 Ga0265338_10002568 3300028800 Bacteria 26849
109 Ga0265338_10002841 3300028800 Bacteria 25298
110 Ga0265338_10006431 3300028800 Bacteria 14974
111 Ga0265338_10008995 3300028800 Bacteria 12013
112 Ga0265338_10024016 3300028800 Bacteria 6242
113 Ga0265338_10034663 3300028800 Bacteria 4874
114 Ga0265338_10078713 3300028800 Bacteria 2778
115 Ga0265338_10078978 3300028800 Bacteria 2772
116 Ga0265338_10108264 3300028800 Bacteria 2245
117 Ga0265338_10122868 3300028800 Bacteria 2065
118 Ga0265338_10132550 3300028800 Bacteria 1964
119 Ga0265338_10185139 3300028800 Bacteria 1584
120 Ga0265324_10000113 3300029957 Bacteria 64194
121 Ga0265324_10001055 3300029957 Bacteria 16778
122 Ga0265324_10006049 3300029957 Bacteria 5112
123 Ga0265328_10010024 3300031239 Bacteria 3831
124 Ga0265320_10000830 3300031240 Bacteria 23320
125 Ga0265320_10011749 3300031240 Bacteria 5137
126 Ga0265320_10014942 3300031240 Bacteria 4402
127 Ga0265325_10035010 3300031241 Bacteria 2668
128 Ga0265329_10000987 3300031242 Bacteria 14210
129 Ga0265340_10001165 3300031247 Bacteria 15059
130 Ga0265340_10005043 3300031247 Bacteria 7346
131 Ga0265339_10005372 3300031249 Bacteria 8533
132 Ga0265339_10031575 3300031249 Unclassified 2992
133 Ga0265327_10000215 3300031251 Bacteria 119243
134 Ga0265327_10002486 3300031251 Bacteria 19349
135 Ga0265327_10016646 3300031251 Bacteria 4657
136 Ga0265316_10000797 3300031344 Bacteria 34790
137 Ga0265316_10011377 3300031344 Bacteria 8031
138 Ga0265316_10018889 3300031344 Bacteria 5916
139 Ga0265316_10024615 3300031344 Bacteria 5038
140 Ga0265316_10027237 3300031344 Bacteria 4736
141 Ga0265316_10027878 3300031344 Bacteria 4668
142 Ga0265316_10103171 3300031344 Bacteria 2165
143 Ga0265316_10190233 3300031344 Bacteria 1525
144 Ga0265313_10001960 3300031595 Bacteria 18614
145 Ga0265313_10009261 3300031595 Bacteria 6412
146 Ga0307508_10000100 3300031616 Bacteria 102032
147 Ga0265314_10000142 3300031711 Bacteria 108299
148 Ga0265314_10002448 3300031711 Bacteria 18993
149 Ga0265314_10011430 3300031711 Bacteria 7329
150 Ga0265314_10019287 3300031711 Bacteria 5286
151 Ga0265342_10006232 3300031712 Bacteria 8908
152 Ga0265342_10007687 3300031712 Bacteria 7852
153 Ga0265342_10028252 3300031712 Bacteria 3498
154 Ga0265342_10053447 3300031712 Bacteria 2404
155 Ga0307412_10053053 3300031911 Bacteria 2687
156 Ga0373928_0000194 3300035084 Bacteria 11699
157 Ga0373929_0001199 3300035085 Bacteria 5017
158 Ga0373934_0013884 3300035086 Unclassified 3048
159 Ga0373944_0000006 3300035089 Bacteria 46890
160 Ga0373949_0000824 3300035090 Bacteria 9879
161 Ga0373932_0000006 3300035112 Bacteria 208547
162 Ga0373953_0036931 3300035117 Bacteria 1926
163 Ga0373954_0023316 3300035118 Bacteria 2813
164 Ga0373956_0063182 3300035119 Bacteria 1679
165 Ga0373943_0028225 3300035170 Bacteria 2643
166 Ga0373962_0000020 3300035242 Bacteria 44353
167 Ga0316574_0027318 3300035398 Unclassified 3438
168 Ga0373931_0000009 3300035691 Bacteria 349854
169 Ga0373931_0071458 3300035691 Unclassified 1896
170 Ga0373935_0023030 3300035692 Bacteria 3825
171 Ga0373935_0102776 3300035692 Bacteria 1886
172 Ga0373927_0006269 3300035695 Bacteria 8118
173 Ga0373927_0014650 3300035695 Bacteria 5185
174 Ga0373947_0085290 3300035725 Unclassified 1961
175 Ga0373937_0022727 3300036401 Bacteria 5642
176 Ga0373937_0033887 3300036401 Bacteria 4643
177 Ga0373925_0000235 3300037068 Bacteria 58451
178 Ga0373925_0000752 3300037068 Bacteria 29787
179 Ga0395905_0068075 3300037471 Bacteria 3335
180 Ga0451577_0006006 3300042876 Bacteria 12226
181 Ga0451577_0009698 3300042876 Bacteria 9232
182 Ga0451577_0024618 3300042876 Bacteria 5474
183 Ga0451577_0091662 3300042876 Bacteria 2713
184 Ga0451577_0228671 3300042876 Unclassified 1681
185 Ga0451577_0256888 3300042876 Bacteria 1582
186 Ga0453684_0001577 3300044712 Bacteria 63055
187 Ga0453684_0008921 3300044712 Bacteria 17752
188 Ga0453684_0016357 3300044712 Bacteria 11608
189 Ga0453684_0045930 3300044712 Bacteria 5819
190 Ga0453684_0178649 3300044712 Bacteria 2494
191 Ga0453684_0318343 3300044712 Unclassified 1763
192 Ga0451576_0005582 3300045051 Bacteria 15716
193 Ga0451576_0035402 3300045051 Bacteria 5297
194 Ga0451576_0042312 3300045051 Bacteria 4810
195 Ga0451576_0045131 3300045051 Bacteria 4643
196 Ga0451576_0391868 3300045051 Bacteria 1456
197 Ga0451576_0599024 3300045051 Bacteria 1158
198 Ga0495592_0000167 3300046454 Bacteria 58650
199 Ga0495629_0162915 3300046459 Bacteria 1549
200 Ga0495651_0040586 3300046462 Bacteria 3619
201 Ga0495662_0024427 3300046476 Bacteria 2916
202 Ga0495618_0018545 3300046514 Bacteria 4272
203 Ga0495628_0000574 3300046516 Bacteria 33726
204 Ga0495630_0000198 3300046517 Bacteria 47012
205 Ga0495630_0009169 3300046517 Bacteria 7116
206 Ga0495630_0010915 3300046517 Bacteria 6562
207 Ga0495630_0043113 3300046517 Bacteria 3370
208 Ga0495630_0096168 3300046517 Bacteria 2239
209 Ga0495666_0044562 3300046526 Bacteria 2141
210 Ga0495640_0013969 3300046533 Bacteria 6092
211 Ga0495586_0000106 3300046535 Bacteria 49541
212 Ga0495586_0000173 3300046535 Bacteria 42356
213 Ga0495586_0002464 3300046535 Bacteria 10039
214 Ga0495586_0005812 3300046535 Bacteria 6595
215 Ga0495645_0002660 3300046543 Bacteria 12144
216 Ga0495645_0035681 3300046543 Bacteria 3625
217 Ga0495634_0009147 3300046642 Bacteria 7316
218 Ga0495634_0057580 3300046642 Bacteria 2593
219 Ga0495635_0079508 3300046663 Bacteria 2244
220 Ga0495658_0004460 3300046683 Bacteria 6891
221 Ga0495658_0036287 3300046683 Bacteria 2719
222 Ga0495613_0025814 3300046689 Bacteria 4377
223 Ga0495624_0057601 3300046690 Bacteria 2443
224 Ga0495674_0001057 3300047319 Bacteria 26468
225 Ga0495674_0042453 3300047319 Bacteria 4057
226 Ga0495676_0091401 3300047321 Bacteria 2275
227 Ga0496115_0007894 3300048918 Bacteria 7850
228 Ga0501031_0000403 3300049568 Bacteria 25035
229 Ga0501031_0021985 3300049568 Bacteria 4156
230 Ga0501033_0002343 3300049570 Bacteria 16146
231 Ga0501033_0028536 3300049570 Bacteria 4192
232 Ga0501046_0002340 3300049580 Bacteria 17873
233 Ga0501046_0031735 3300049580 Bacteria 4281
234 Ga0501047_0010744 3300049581 Bacteria 8655
235 Ga0501047_0097578 3300049581 Bacteria 2817
236 Ga0501083_0005005 3300049744 Bacteria 9391
237 Ga0501083_0029242 3300049744 Bacteria 3792
238 Ga0501035_0004135 3300049822 Bacteria 13785
239 Ga0501035_0005651 3300049822 Bacteria 11807
240 Ga0501044_0000148 3300049823 Bacteria 86490
241 Ga0501044_0011182 3300049823 Bacteria 9734
242 Ga0501044_0020866 3300049823 Bacteria 6994
243 nmdc:mga06r32_155452_c1 3300050510 Bacteria 2268
244 nmdc:mga0n895_115006_c1 3300050512 Bacteria 2708

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300045051 Ga0451576_0599024 Ga0451576_0599024_14_1036 326
2 3300035119 Ga0373956_0063182 Ga0373956_0063182_561_1658 352
3 3300046642 Ga0495634_0057580 Ga0495634_0057580_10_1134 360
4 3300026095 Ga0207676_10334914 Ga0207676_103349141 369
5 3300031239 Ga0265328_10010024 Ga0265328_100100245 372
6 3300031242 Ga0265329_10000987 Ga0265329_100009871 372
7 3300031344 Ga0265316_10190233 Ga0265316_101902331 372
8 3300031711 Ga0265314_10000142 Ga0265314_1000014238 372
9 3300035691 Ga0373931_0071458 Ga0373931_0071458_187_1524 375
10 3300046454 Ga0495592_0000167 Ga0495592_0000167_25925_27148 375
11 3300046476 Ga0495662_0024427 Ga0495662_0024427_822_2045 375
12 3300046514 Ga0495618_0018545 Ga0495618_0018545_1172_2395 375
13 3300046516 Ga0495628_0000574 Ga0495628_0000574_31060_32283 375
14 3300046517 Ga0495630_0010915 Ga0495630_0010915_179_1402 375
15 3300046535 Ga0495586_0000173 Ga0495586_0000173_25816_27039 375
16 3300046543 Ga0495645_0002660 Ga0495645_0002660_4635_5858 375
17 3300046683 Ga0495658_0036287 Ga0495658_0036287_151_1374 375
18 3300047319 Ga0495674_0042453 Ga0495674_0042453_1310_2533 375
19 3300035118 Ga0373954_0023316 Ga0373954_0023316_505_1761 376
20 3300045051 Ga0451576_0035402 Ga0451576_0035402_2681_3931 376
21 3300048918 Ga0496115_0007894 Ga0496115_0007894_3395_4648 377
22 3300028800 Ga0265338_10008995 Ga0265338_100089955 378
23 3300035117 Ga0373953_0036931 Ga0373953_0036931_635_1891 378
24 3300036401 Ga0373937_0033887 Ga0373937_0033887_1347_2603 378
25 3300005841 Ga0068863_100033957 Ga0068863_1000339572 381
26 3300025936 Ga0207670_10000702 Ga0207670_100007026 381
27 3300025936 Ga0207670_10094181 Ga0207670_100941811 381
28 3300026088 Ga0207641_10052930 Ga0207641_100529302 381
29 3300005563 Ga0068855_100191200 Ga0068855_1001912002 382
30 3300009551 Ga0105238_10002943 Ga0105238_100029439 382
31 3300025924 Ga0207694_10003949 Ga0207694_100039496 382
32 3300028800 Ga0265338_10132550 Ga0265338_101325503 382
33 3300005843 Ga0068860_100000236 Ga0068860_10000023617 383
34 3300028381 Ga0268264_10000508 Ga0268264_1000050819 383
35 3300049570 Ga0501033_0028536 Ga0501033_0028536_209_1432 383
36 3300005340 Ga0070689_100102975 Ga0070689_1001029751 384
37 3300005844 Ga0068862_100180012 Ga0068862_1001800122 384
38 3300005544 Ga0070686_100017927 Ga0070686_1000179274 385
39 3300031711 Ga0265314_10019287 Ga0265314_100192875 385
40 3300005548 Ga0070665_100276080 Ga0070665_1002760801 386
41 3300005563 Ga0068855_100051154 Ga0068855_1000511544 386
42 3300005614 Ga0068856_100013644 Ga0068856_1000136448 386
43 3300007076 Ga0075435_100203826 Ga0075435_1002038262 386
44 3300009093 Ga0105240_10164871 Ga0105240_101648712 386
45 3300009551 Ga0105238_10030561 Ga0105238_100305615 386
46 3300025913 Ga0207695_10153935 Ga0207695_101539352 386
47 3300025924 Ga0207694_10014784 Ga0207694_100147845 386
48 3300025949 Ga0207667_10158134 Ga0207667_101581343 386
49 3300026078 Ga0207702_10017955 Ga0207702_100179557 386
50 3300028653 Ga0265323_10001774 Ga0265323_100017742 386
51 3300028800 Ga0265338_10108264 Ga0265338_101082642 386
52 3300031344 Ga0265316_10027878 Ga0265316_100278786 386
53 3300042876 Ga0451577_0006006 Ga0451577_0006006_7154_8392 386
54 3300046689 Ga0495613_0025814 Ga0495613_0025814_3041_4288 386
55 3300028653 Ga0265323_10014959 Ga0265323_100149592 387
56 3300031712 Ga0265342_10028252 Ga0265342_100282522 387
57 3300005329 Ga0070683_100005840 Ga0070683_1000058403 388
58 3300025913 Ga0207695_10177369 Ga0207695_101773692 388
59 3300035398 Ga0316574_0027318 Ga0316574_0027318_1643_2881 388
60 3300049580 Ga0501046_0002340 Ga0501046_0002340_9711_10955 388
61 3300049581 Ga0501047_0010744 Ga0501047_0010744_4626_5870 388
62 3300028556 Ga0265337_1000883 Ga0265337_10008835 389
63 3300028800 Ga0265338_10000398 Ga0265338_1000039825 389
64 3300029957 Ga0265324_10000113 Ga0265324_1000011317 389
65 3300031247 Ga0265340_10005043 Ga0265340_100050431 389
66 3300031251 Ga0265327_10000215 Ga0265327_1000021585 389
67 3300046517 Ga0495630_0043113 Ga0495630_0043113_653_1921 389
68 3300046533 Ga0495640_0013969 Ga0495640_0013969_3450_4697 389
69 3300046535 Ga0495586_0005812 Ga0495586_0005812_3328_4575 389
70 3300046690 Ga0495624_0057601 Ga0495624_0057601_1165_2412 389
71 3300031251 Ga0265327_10016646 Ga0265327_100166464 390
72 3300046517 Ga0495630_0096168 Ga0495630_0096168_339_1598 390
73 3300013297 Ga0157378_10046194 Ga0157378_100461943 391
74 3300028556 Ga0265337_1026485 Ga0265337_10264852 391
75 3300028558 Ga0265326_10010419 Ga0265326_100104192 391
76 3300028800 Ga0265338_10000237 Ga0265338_1000023765 391
77 3300028800 Ga0265338_10024016 Ga0265338_100240166 391
78 3300029957 Ga0265324_10006049 Ga0265324_100060496 391
79 3300031251 Ga0265327_10002486 Ga0265327_100024862 391
80 3300031595 Ga0265313_10001960 Ga0265313_1000196012 391
81 3300028563 Ga0265319_1006603 Ga0265319_10066035 392
82 3300028577 Ga0265318_10033754 Ga0265318_100337542 392
83 3300045051 Ga0451576_0042312 Ga0451576_0042312_513_1757 392
84 3300005438 Ga0070701_10002294 Ga0070701_100022944 393
85 3300005440 Ga0070705_100046606 Ga0070705_1000466062 393
86 3300005444 Ga0070694_100005926 Ga0070694_1000059262 393
87 3300028800 Ga0265338_10002169 Ga0265338_1000216910 393
88 3300031240 Ga0265320_10011749 Ga0265320_100117492 393
89 3300005937 Ga0081455_10217131 Ga0081455_102171311 394
90 3300049823 Ga0501044_0011182 Ga0501044_0011182_7809_9077 394
91 3300006847 Ga0075431_100144340 Ga0075431_1001443403 395
92 3300009093 Ga0105240_10142072 Ga0105240_101420723 395
93 3300031249 Ga0265339_10005372 Ga0265339_100053722 395
94 3300031712 Ga0265342_10007687 Ga0265342_100076876 395
95 3300042876 Ga0451577_0228671 Ga0451577_0228671_414_1643 395
96 3300049744 Ga0501083_0005005 Ga0501083_0005005_3565_4815 395
97 3300049744 Ga0501083_0029242 Ga0501083_0029242_796_2046 395
98 3300050510 nmdc:mga06r32_155452_c1 nmdc:mga06r32_155452_c1_582_1847 395
99 3300009093 Ga0105240_10015035 Ga0105240_100150359 396
100 3300025913 Ga0207695_10039002 Ga0207695_100390022 396
101 3300031616 Ga0307508_10000100 Ga0307508_1000010035 396
102 3300035692 Ga0373935_0023030 Ga0373935_0023030_635_1897 396
103 3300042876 Ga0451577_0009698 Ga0451577_0009698_2686_3921 396
104 3300044712 Ga0453684_0001577 Ga0453684_0001577_10598_11833 396
105 3300005327 Ga0070658_10161498 Ga0070658_101614982 397
106 3300005340 Ga0070689_100002222 Ga0070689_10000222210 397
107 3300005535 Ga0070684_100142735 Ga0070684_1001427353 397
108 3300025909 Ga0207705_10086017 Ga0207705_100860173 397
109 3300028800 Ga0265338_10185139 Ga0265338_101851392 397
110 3300042876 Ga0451577_0024618 Ga0451577_0024618_3498_4742 397
111 3300044712 Ga0453684_0008921 Ga0453684_0008921_11715_12959 397
112 3300046543 Ga0495645_0035681 Ga0495645_0035681_1496_2728 397
113 3300049568 Ga0501031_0000403 Ga0501031_0000403_3963_5198 397
114 3300049568 Ga0501031_0021985 Ga0501031_0021985_177_1412 397
115 3300049570 Ga0501033_0002343 Ga0501033_0002343_7772_9007 397
116 3300049580 Ga0501046_0031735 Ga0501046_0031735_608_1843 397
117 3300049581 Ga0501047_0097578 Ga0501047_0097578_450_1685 397
118 3300049822 Ga0501035_0004135 Ga0501035_0004135_12104_13339 397
119 3300049822 Ga0501035_0005651 Ga0501035_0005651_5637_6872 397
120 3300049823 Ga0501044_0000148 Ga0501044_0000148_73296_74531 397
121 3300049823 Ga0501044_0020866 Ga0501044_0020866_4764_5999 397
122 3300014325 Ga0163163_10133662 Ga0163163_101336623 398
123 3300005336 Ga0070680_100036769 Ga0070680_1000367695 399
124 3300005458 Ga0070681_10061897 Ga0070681_100618974 399
125 3300005530 Ga0070679_100142678 Ga0070679_1001426783 399
126 3300006028 Ga0070717_10000164 Ga0070717_1000016420 399
127 3300009545 Ga0105237_10010621 Ga0105237_1001062110 399
128 3300025912 Ga0207707_10087072 Ga0207707_100870723 399
129 3300025914 Ga0207671_10005925 Ga0207671_1000592510 399
130 3300028573 Ga0265334_10012375 Ga0265334_100123751 399
131 3300028577 Ga0265318_10000002 Ga0265318_1000000248 399
132 3300028800 Ga0265338_10002568 Ga0265338_1000256815 399
133 3300031595 Ga0265313_10009261 Ga0265313_100092612 399
134 3300031711 Ga0265314_10002448 Ga0265314_100024486 399
135 3300046683 Ga0495658_0004460 Ga0495658_0004460_5536_6855 399
136 3300005841 Ga0068863_100168036 Ga0068863_1001680362 400
137 3300005842 Ga0068858_100161705 Ga0068858_1001617053 400
138 3300006028 Ga0070717_10134891 Ga0070717_101348911 400
139 3300006237 Ga0097621_100194176 Ga0097621_1001941762 400
140 3300014325 Ga0163163_10000096 Ga0163163_1000009657 400
141 3300014325 Ga0163163_10041976 Ga0163163_100419762 400
142 3300026035 Ga0207703_10240951 Ga0207703_102409512 400
143 3300028563 Ga0265319_1002970 Ga0265319_10029703 400
144 3300028800 Ga0265338_10078978 Ga0265338_100789784 400
145 3300044712 Ga0453684_0318343 Ga0453684_0318343_405_1652 400
146 3300005544 Ga0070686_100038674 Ga0070686_1000386742 401
147 3300005614 Ga0068856_100048903 Ga0068856_1000489034 401
148 3300026078 Ga0207702_10026991 Ga0207702_100269912 401
149 3300026088 Ga0207641_10166272 Ga0207641_101662722 401
150 3300028653 Ga0265323_10000320 Ga0265323_1000032015 401
151 3300028654 Ga0265322_10000232 Ga0265322_100002327 401
152 3300028800 Ga0265338_10034663 Ga0265338_100346634 401
153 3300031712 Ga0265342_10006232 Ga0265342_100062326 401
154 3300036401 Ga0373937_0022727 Ga0373937_0022727_1226_2473 401
155 3300044712 Ga0453684_0016357 Ga0453684_0016357_9545_10792 401
156 3300045051 Ga0451576_0045131 Ga0451576_0045131_1430_2677 401
157 3300045051 Ga0451576_0391868 Ga0451576_0391868_95_1342 401
158 3300046459 Ga0495629_0162915 Ga0495629_0162915_95_1342 401
159 3300046517 Ga0495630_0000198 Ga0495630_0000198_31711_32958 401
160 3300046526 Ga0495666_0044562 Ga0495666_0044562_85_1332 401
161 3300046535 Ga0495586_0000106 Ga0495586_0000106_16604_17851 401
162 3300047319 Ga0495674_0001057 Ga0495674_0001057_11696_12943 401
163 3300047321 Ga0495676_0091401 Ga0495676_0091401_986_2233 401
164 3300005329 Ga0070683_100163051 Ga0070683_1001630512 402
165 3300005544 Ga0070686_100031126 Ga0070686_1000311262 402
166 3300005577 Ga0068857_100026967 Ga0068857_1000269672 402
167 3300005614 Ga0068856_100000293 Ga0068856_10000029340 402
168 3300006914 Ga0075436_100040248 Ga0075436_1000402482 402
169 3300013308 Ga0157375_10000051 Ga0157375_1000005137 402
170 3300025903 Ga0207680_10100702 Ga0207680_101007022 402
171 3300025949 Ga0207667_10034418 Ga0207667_100344183 402
172 3300026078 Ga0207702_10003426 Ga0207702_100034268 402
173 3300026116 Ga0207674_10036764 Ga0207674_100367646 402
174 3300028556 Ga0265337_1012220 Ga0265337_10122202 402
175 3300028653 Ga0265323_10000016 Ga0265323_1000001616 402
176 3300028666 Ga0265336_10022963 Ga0265336_100229632 402
177 3300028800 Ga0265338_10001023 Ga0265338_1000102328 402
178 3300028800 Ga0265338_10006431 Ga0265338_100064316 402
179 3300029957 Ga0265324_10001055 Ga0265324_100010558 402
180 3300031240 Ga0265320_10000830 Ga0265320_1000083015 402
181 3300031240 Ga0265320_10014942 Ga0265320_100149423 402
182 3300031344 Ga0265316_10011377 Ga0265316_100113778 402
183 3300035170 Ga0373943_0028225 Ga0373943_0028225_1122_2369 402
184 3300035692 Ga0373935_0102776 Ga0373935_0102776_522_1772 402
185 3300035695 Ga0373927_0014650 Ga0373927_0014650_955_2202 402
186 3300035725 Ga0373947_0085290 Ga0373947_0085290_55_1302 402
187 3300037068 Ga0373925_0000752 Ga0373925_0000752_21753_23000 402
188 3300042876 Ga0451577_0091662 Ga0451577_0091662_680_2065 402
189 3300045051 Ga0451576_0005582 Ga0451576_0005582_10277_11527 402
190 3300046462 Ga0495651_0040586 Ga0495651_0040586_1498_2748 402
191 3300046517 Ga0495630_0009169 Ga0495630_0009169_3803_5050 402
192 3300005327 Ga0070658_10044245 Ga0070658_100442452 403
193 3300009093 Ga0105240_10214978 Ga0105240_102149783 403
194 3300025909 Ga0207705_10021292 Ga0207705_100212922 403
195 3300025913 Ga0207695_10308806 Ga0207695_103088061 403
196 3300031712 Ga0265342_10053447 Ga0265342_100534473 403
197 3300035084 Ga0373928_0000194 Ga0373928_0000194_5851_7107 403
198 3300035085 Ga0373929_0001199 Ga0373929_0001199_2218_3474 403
199 3300035089 Ga0373944_0000006 Ga0373944_0000006_26971_28227 403
200 3300035090 Ga0373949_0000824 Ga0373949_0000824_7326_8582 403
201 3300035112 Ga0373932_0000006 Ga0373932_0000006_106608_107864 403
202 3300035242 Ga0373962_0000020 Ga0373962_0000020_31247_32503 403
203 3300035691 Ga0373931_0000009 Ga0373931_0000009_104923_106179 403
204 3300037068 Ga0373925_0000235 Ga0373925_0000235_3691_4947 403
205 3300028556 Ga0265337_1000018 Ga0265337_100001827 404
206 3300028666 Ga0265336_10015955 Ga0265336_100159552 404
207 3300031344 Ga0265316_10103171 Ga0265316_101031712 404
208 3300035695 Ga0373927_0006269 Ga0373927_0006269_168_1430 404
209 3300005340 Ga0070689_100016643 Ga0070689_1000166436 405
210 3300005439 Ga0070711_100060874 Ga0070711_1000608742 405
211 3300005842 Ga0068858_100072445 Ga0068858_1000724452 405
212 3300025913 Ga0207695_10000339 Ga0207695_1000033939 405
213 3300025916 Ga0207663_10115913 Ga0207663_101159131 405
214 3300025936 Ga0207670_10004008 Ga0207670_100040086 405
215 3300026035 Ga0207703_10055437 Ga0207703_100554375 405
216 3300028556 Ga0265337_1014273 Ga0265337_10142732 405
217 3300028556 Ga0265337_1018459 Ga0265337_10184592 405
218 3300028573 Ga0265334_10014221 Ga0265334_100142214 405
219 3300028573 Ga0265334_10029578 Ga0265334_100295782 405
220 3300028800 Ga0265338_10000294 Ga0265338_1000029438 405
221 3300028800 Ga0265338_10001986 Ga0265338_1000198612 405
222 3300028800 Ga0265338_10002841 Ga0265338_1000284111 405
223 3300028800 Ga0265338_10078713 Ga0265338_100787133 405
224 3300028800 Ga0265338_10122868 Ga0265338_101228682 405
225 3300031241 Ga0265325_10035010 Ga0265325_100350102 405
226 3300031247 Ga0265340_10001165 Ga0265340_100011653 405
227 3300031249 Ga0265339_10031575 Ga0265339_100315754 405
228 3300031344 Ga0265316_10000797 Ga0265316_1000079711 405
229 3300031344 Ga0265316_10018889 Ga0265316_100188892 405
230 3300031344 Ga0265316_10024615 Ga0265316_100246153 405
231 3300031344 Ga0265316_10027237 Ga0265316_100272376 405
232 3300031711 Ga0265314_10011430 Ga0265314_100114302 405
233 3300035086 Ga0373934_0013884 Ga0373934_0013884_1472_2728 405
234 3300037471 Ga0395905_0068075 Ga0395905_0068075_1806_3098 405
235 3300042876 Ga0451577_0256888 Ga0451577_0256888_124_1380 405
236 3300046535 Ga0495586_0002464 Ga0495586_0002464_4782_6038 405
237 3300046642 Ga0495634_0009147 Ga0495634_0009147_4572_5828 405
238 3300046663 Ga0495635_0079508 Ga0495635_0079508_160_1416 405
239 3300003320 rootH2_10109345 rootH2_101093453 406
240 3300006871 Ga0075434_100115245 Ga0075434_1001152454 406
241 3300031911 Ga0307412_10053053 Ga0307412_100530532 406
242 3300044712 Ga0453684_0045930 Ga0453684_0045930_812_2104 406
243 3300044712 Ga0453684_0178649 Ga0453684_0178649_987_2318 406
244 3300050512 nmdc:mga0n895_115006_c1 nmdc:mga0n895_115006_c1_144_1406 406

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00482

T2SSF

Type II secretion system (T2SS), protein F

107

230

0.99

PF00482

T2SSF

Type II secretion system (T2SS), protein F

311

434

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
2whn-assembly2.cif.gz_B n-terminal domain from the pilc type iv pilus biogenesis protein 0.9579 76 176
2whn-assembly1.cif.gz_A n-terminal domain from the pilc type iv pilus biogenesis protein 0.954 75 176
5nbg-assembly1.cif.gz_B structure of the cytoplasmic domain i of outf in the d. dadantii type ii secretion system 0.9511 76 181
3c1q-assembly1.cif.gz_A the three-dimensional structure of the cytoplasmic domains of epsf from the type 2 secretion system of vibrio cholerae 0.9459 75 180
2vmb-assembly2.cif.gz_B the three-dimensional structure of the cytoplasmic domains of epsf from the type 2 secretion system of vibrio cholerae 0.9365 76 183
ID Description Score Start End Superfamily
2whnB00 Mainly Alpha;Up-down Bundle;Receptor-associated Protein;Type II secretion system (T2SS), domain F 0.9579 76 176 1.20.81.30
af_P36646_249_359_1.20.81.30 Mainly Alpha;Up-down Bundle;Receptor-associated Protein;Type II secretion system (T2SS), domain F 0.9515 78 176 1.20.81.30
af_P36646_1_51_3.10.20.10 Alpha Beta;Roll;Ubiquitin-like (UB roll); 0.9493 2 46 3.10.20.10
af_P41441_261_365_1.20.81.30 Mainly Alpha;Up-down Bundle;Receptor-associated Protein;Type II secretion system (T2SS), domain F 0.9351 270 372 1.20.81.30
2whnB00 Mainly Alpha;Up-down Bundle;Receptor-associated Protein;Type II secretion system (T2SS), domain F 0.9223 76 176 1.20.81.30
ID Description Score Start End GO Terms
AF-A0A7Z9PV31-F1-model_v4 Type II secretion system protein GspF domain-containing protein 0.9575 72 171 GO:0005886
AF-A0A2H0FJC4-F1-model_v4 Type II secretion system protein GspF domain-containing protein 0.9492 232 350 GO:0005886
AF-A0A7R8ZZ00-F1-model_v4 Uncharacterized protein 0.9343 246 387 GO:0005886
AF-A0A367ZJG7-F1-model_v4 General secretion pathway protein E 0.9282 267 364 GO:0005524
GO:0005886
GO:0016887
AF-A0A496SHG4-F1-model_v4 Type II secretion system F family protein 0.9221 245 405 GO:0005886

Feature Viewer

pLDDT pTM Quality
75.61 0.64 Medium
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Predicted Structure (AlphaFold2)

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