F356840

General Info

Members Datasets Scaffolds Average Seq Length
244 164 241 306

Family's Representative Sequence

Representative Sequence 3300049568|Ga0501031_0029853|Ga0501031_0029853_2193_3179
Length 328
Sequence LSGSRAEPLDALRAGGKRAMALALARIEAAPGERPTFDLLDAAYADPRAHVVGITGPPGVGKSTLVSRLITAYRERQQSVGVIAIDPSSRRSRGALLGDRTRFEIAPDDQGVFVRSMASRGRLGGLAALTPAAMVLMRAVYDLVLVETVGVGQAETDVAAVSDSVVFCVQPGSGDSLQYLKAGIAEIPDVAVVTKADLGRVARRTEDDLRAALARQPTRTEGWSVPVLLINGQEGQGIDELAGVLAEHRELLGHGGRLQAQRAGQAAAWLDDWVREEYGRAGLARAARLATDPFDETSGSPFARMRALHRRLQHAEAAPPAMRPWLRE

Samples

Sample ID Description Type Environment
1 2842333319 Skermanella aerolata SEMIA 4010 Isolate Nodule
2 2883291878 Hypericibacter terrae R5913 Isolate Rhizosphere
3 2883354860 Hypericibacter adhaerens R5959 Isolate Rhizosphere
4 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
5 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
6 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
9 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
12 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
13 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
14 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
15 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
16 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
17 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
20 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
21 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
22 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
23 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
24 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
25 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
26 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
27 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
28 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
29 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
30 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
31 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
32 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
33 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
34 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
35 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
36 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
37 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
38 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
39 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
40 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
41 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
42 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
43 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
44 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
45 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
46 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
47 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
48 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
49 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
50 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
51 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
53 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
54 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
55 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
56 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
57 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
73 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
74 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
78 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
79 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
80 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
81 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
82 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
83 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
84 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
85 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
86 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
87 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
88 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
89 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
90 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
91 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
92 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
93 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
94 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
95 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
96 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
97 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
98 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
99 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
100 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
101 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
102 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
103 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
104 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
105 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
106 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
107 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
108 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
109 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
110 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
111 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
112 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
113 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
114 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
115 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
117 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
118 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
120 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
123 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
125 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
128 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
129 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
130 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
131 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
132 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
133 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
134 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
135 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
136 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
137 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
138 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
139 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
140 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
141 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
142 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
145 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
146 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
147 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
148 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
149 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
150 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
151 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
152 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
153 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
154 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
155 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
156 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
157 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
158 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
159 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
160 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
161 3300053733 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 endosphere Metagenome Endosphere
162 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
163 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
164 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.77
Metatranscriptomes 0
Isolates 1.23

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 17.21
Nodule 0.41
Rhizoplane 0
Rhizosphere 79.51
Stem 0
Stem Tuber 0
Unclassified 2.87

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25153J46596_10000042 3300003215 Bacteria 161788
2 Ga0055542_1015803 3300003762 Bacteria 1203
3 Ga0070658_10046691 3300005327 Bacteria 3504
4 Ga0070683_100019003 3300005329 Bacteria 6097
5 Ga0070680_100021595 3300005336 Bacteria 5119
6 Ga0070680_100140506 3300005336 Bacteria 2025
7 Ga0070691_10003029 3300005341 Bacteria 7526
8 Ga0070661_100008704 3300005344 Bacteria 7022
9 Ga0070709_10018127 3300005434 Bacteria 4049
10 Ga0070708_100235998 3300005445 Bacteria 1716
11 Ga0070708_100433697 3300005445 Bacteria 1239
12 Ga0070681_10038179 3300005458 Bacteria 4816
13 Ga0070706_100246909 3300005467 Bacteria 1667
14 Ga0070707_100335029 3300005468 Bacteria 1470
15 Ga0070698_100007157 3300005471 Bacteria 12085
16 Ga0070699_100177442 3300005518 Bacteria 1890
17 Ga0070699_100231482 3300005518 Bacteria 1648
18 Ga0070684_100038433 3300005535 Bacteria 4111
19 Ga0070697_100491063 3300005536 Bacteria 1073
20 Ga0068853_100129422 3300005539 Bacteria 2258
21 Ga0070693_100248005 3300005547 Bacteria 1179
22 Ga0070665_100299963 3300005548 Bacteria 1610
23 Ga0068855_100008504 3300005563 Bacteria 12408
24 Ga0068855_100054774 3300005563 Bacteria 4687
25 Ga0070664_100074831 3300005564 Bacteria 2907
26 Ga0068856_100124766 3300005614 Bacteria 2578
27 Ga0068852_100019871 3300005616 Bacteria 5328
28 Ga0068863_100259418 3300005841 Bacteria 1680
29 Ga0068858_100118290 3300005842 Bacteria 2477
30 Ga0068858_100294353 3300005842 Bacteria 1548
31 Ga0068860_100051162 3300005843 Bacteria 3931
32 Ga0081455_10003150 3300005937 Bacteria 19159
33 Ga0081455_10006796 3300005937 Bacteria 12197
34 Ga0081455_10009019 3300005937 Bacteria 10295
35 Ga0081538_10004905 3300005981 Bacteria 12190
36 Ga0081538_10031424 3300005981 Bacteria 3582
37 Ga0081539_10001160 3300005985 Bacteria 47689
38 Ga0081539_10006140 3300005985 Bacteria 11692
39 Ga0075365_10101086 3300006038 Bacteria 1974
40 Ga0075362_10016353 3300006177 Bacteria 3036
41 Ga0075367_10065656 3300006178 Bacteria 2174
42 Ga0075369_10004702 3300006186 Bacteria 5064
43 Ga0075369_10066582 3300006186 Bacteria 1580
44 Ga0075366_10102098 3300006195 Bacteria 1721
45 Ga0097620_100117755 3300006931 Bacteria 2722
46 Ga0099794_10105303 3300007265 Bacteria 1410
47 Ga0105240_10002673 3300009093 Bacteria 28374
48 Ga0111539_10000097 3300009094 Bacteria 91946
49 Ga0105237_10107352 3300009545 Bacteria 2784
50 Ga0105237_10465806 3300009545 Bacteria 1270
51 Ga0105238_10170231 3300009551 Bacteria 2154
52 Ga0157370_10040041 3300013104 Bacteria 4526
53 Ga0157369_10365565 3300013105 Bacteria 1498
54 Ga0157372_10366791 3300013307 Bacteria 1678
55 Ga0163163_10645377 3300014325 Bacteria 1122
56 Ga0213872_10021650 3300021361 Bacteria 2961
57 Ga0213872_10025072 3300021361 Bacteria 2742
58 Ga0213876_10127565 3300021384 Bacteria 1351
59 Ga0209148_1002201 3300025254 Bacteria 7185
60 Ga0209455_1000872 3300025272 Bacteria 15986
61 Ga0209758_1000110 3300025297 Bacteria 213110
62 Ga0209758_1027672 3300025297 Bacteria 2416
63 Ga0209758_1053990 3300025297 Bacteria 1376
64 Ga0209050_1014517 3300025298 Bacteria 3385
65 Ga0207426_1013910 3300025302 Bacteria 2966
66 Ga0209051_1031112 3300025303 Bacteria 2059
67 Ga0209257_1000407 3300025304 Bacteria 83438
68 Ga0207647_10074613 3300025904 Bacteria 2042
69 Ga0207705_10009474 3300025909 Bacteria 7084
70 Ga0207684_10092008 3300025910 Bacteria 2585
71 Ga0207695_10062230 3300025913 Bacteria 3854
72 Ga0207646_10057090 3300025922 Bacteria 3488
73 Ga0207694_10082152 3300025924 Bacteria 2532
74 Ga0207659_10107116 3300025926 Bacteria 2118
75 Ga0207700_10069020 3300025928 Bacteria 2711
76 Ga0207679_10048120 3300025945 Bacteria 3102
77 Ga0207667_10013955 3300025949 Bacteria 9179
78 Ga0207667_10084056 3300025949 Bacteria 3295
79 Ga0207640_10076634 3300025981 Bacteria 2271
80 Ga0207703_10171631 3300026035 Bacteria 1908
81 Ga0207639_10137784 3300026041 Bacteria 2029
82 Ga0207674_10341385 3300026116 Bacteria 1448
83 Ga0207683_10005498 3300026121 Bacteria 10857
84 Ga0209974_10036290 3300027876 Bacteria 1637
85 Ga0207428_10001860 3300027907 Bacteria 21540
86 Ga0268266_10005797 3300028379 Bacteria 11437
87 Ga0268266_10024570 3300028379 Bacteria 5126
88 Ga0268266_10264621 3300028379 Bacteria 1594
89 Ga0268265_10008132 3300028380 Bacteria 7089
90 Ga0268264_10039779 3300028381 Bacteria 3885
91 Ga0265334_10005522 3300028573 Bacteria 5523
92 Ga0265324_10001335 3300029957 Bacteria 14406
93 Ga0265332_10020001 3300031238 Bacteria 2956
94 Ga0265328_10010360 3300031239 Bacteria 3757
95 Ga0265328_10061894 3300031239 Bacteria 1374
96 Ga0265339_10015339 3300031249 Bacteria 4594
97 Ga0265331_10000517 3300031250 Bacteria 36007
98 Ga0265331_10003194 3300031250 Bacteria 10700
99 Ga0265331_10017407 3300031250 Bacteria 3747
100 Ga0265327_10000294 3300031251 Bacteria 96710
101 Ga0265327_10102923 3300031251 Bacteria 1375
102 Ga0265316_10028813 3300031344 Bacteria 4575
103 Ga0265316_10078228 3300031344 Bacteria 2539
104 Ga0307513_10355531 3300031456 Bacteria 1211
105 Ga0307513_10416215 3300031456 Bacteria 1075
106 Ga0265313_10000490 3300031595 Bacteria 41712
107 Ga0265313_10000788 3300031595 Bacteria 32028
108 Ga0316575_10024234 3300031665 Bacteria 2348
109 Ga0265314_10011931 3300031711 Bacteria 7132
110 Ga0265314_10033634 3300031711 Bacteria 3755
111 Ga0265342_10007511 3300031712 Bacteria 7974
112 Ga0316576_10116298 3300031727 Bacteria 2007
113 Ga0307410_10063986 3300031852 Bacteria 2526
114 Ga0307416_100081842 3300032002 Bacteria 2732
115 Ga0316583_10034289 3300032133 Bacteria 1801
116 Ga0373936_0064978 3300035113 Bacteria 1496
117 Ga0373939_0022464 3300035114 Bacteria 1739
118 Ga0373939_0073732 3300035114 Bacteria 1118
119 Ga0373941_0056323 3300035115 Bacteria 1266
120 Ga0373931_0062064 3300035691 Bacteria 2017
121 Ga0373937_0092721 3300036401 Bacteria 2800
122 Ga0373925_0294396 3300037068 Bacteria 1309
123 Ga0395899_0042624 3300037312 Bacteria 3387
124 Ga0395899_0104933 3300037312 Bacteria 2036
125 Ga0395900_0016961 3300037418 Bacteria 7432
126 Ga0395900_0489539 3300037418 Bacteria 1181
127 Ga0395898_0029160 3300037466 Bacteria 5529
128 Ga0395901_0000583 3300038443 Bacteria 42413
129 Ga0400483_289026 3300039062 Bacteria 4008
130 Ga0436365_0378078 3300039437 Unclassified 1084
131 Ga0436365_0379158 3300039437 Bacteria 2338
132 Ga0436365_1626345 3300039437 Bacteria 4667
133 Ga0436360_0583423 3300039438 Bacteria 2151
134 Ga0436360_1205218 3300039438 Bacteria 10498
135 Ga0436361_0566593 3300039447 Bacteria 4479
136 Ga0436361_0585330 3300039447 Bacteria 3798
137 Ga0436361_0712557 3300039447 Bacteria 10947
138 Ga0436362_0003163 3300039453 Bacteria 1635
139 Ga0451577_0071088 3300042876 Bacteria 3103
140 Ga0453683_0020217 3300044673 Bacteria 4255
141 Ga0466963_0016474 3300044694 Bacteria 4596
142 Ga0453684_0269317 3300044712 Bacteria 1947
143 Ga0451576_0000426 3300045051 Bacteria 96967
144 Ga0451576_0027941 3300045051 Bacteria 6051
145 Ga0451576_0064137 3300045051 Bacteria 3827
146 Ga0451576_0181819 3300045051 Bacteria 2195
147 Ga0466967_0027679 3300045976 Bacteria 4718
148 Ga0501031_0029853 3300049568 Bacteria 3556
149 Ga0501032_0003237 3300049569 Bacteria 12520
150 Ga0501033_0092839 3300049570 Bacteria 2207
151 Ga0501034_0010991 3300049571 Bacteria 9397
152 Ga0501034_0020823 3300049571 Bacteria 6692
153 Ga0501034_0021056 3300049571 Bacteria 6654
154 Ga0501034_0083663 3300049571 Bacteria 3193
155 Ga0501034_0323354 3300049571 Bacteria 1475
156 Ga0501036_0045399 3300049572 Bacteria 3722
157 Ga0501037_0008942 3300049573 Bacteria 7341
158 Ga0501037_0058524 3300049573 Bacteria 2812
159 Ga0501038_0001830 3300049574 Bacteria 19693
160 Ga0501038_0032374 3300049574 Bacteria 4613
161 Ga0501039_0029011 3300049575 Bacteria 4260
162 Ga0501039_0181491 3300049575 Bacteria 1655
163 Ga0501040_0010820 3300049576 Bacteria 5963
164 Ga0501040_0069156 3300049576 Bacteria 2436
165 Ga0501041_0027693 3300049577 Bacteria 3416
166 Ga0501041_0068068 3300049577 Bacteria 2183
167 Ga0501043_0003061 3300049579 Bacteria 13893
168 Ga0501043_0152215 3300049579 Bacteria 1810
169 Ga0501046_0000538 3300049580 Bacteria 37587
170 Ga0501047_0024369 3300049581 Bacteria 5808
171 Ga0501047_0173681 3300049581 Bacteria 2023
172 Ga0501048_0138329 3300049582 Bacteria 1721
173 Ga0501048_0153367 3300049582 Bacteria 1630
174 Ga0501068_0010475 3300049584 Bacteria 5211
175 Ga0501068_0027558 3300049584 Bacteria 3355
176 Ga0501069_0014007 3300049585 Bacteria 4283
177 Ga0501070_0017667 3300049586 Bacteria 5988
178 Ga0501070_0443544 3300049586 Bacteria 1047
179 Ga0501071_0017146 3300049587 Bacteria 4990
180 Ga0501072_0185209 3300049588 Bacteria 1661
181 Ga0501073_0001283 3300049589 Bacteria 18442
182 Ga0501073_0006938 3300049589 Bacteria 8432
183 Ga0501074_0006735 3300049590 Bacteria 8289
184 Ga0501074_0020432 3300049590 Bacteria 4813
185 Ga0501075_0016148 3300049591 Bacteria 5373
186 Ga0501076_0028845 3300049592 Bacteria 4312
187 Ga0501077_0009475 3300049593 Bacteria 6053
188 Ga0501079_0027872 3300049741 Bacteria 4332
189 Ga0501080_0007402 3300049742 Bacteria 9905
190 Ga0501080_0017603 3300049742 Bacteria 6607
191 Ga0501080_0156908 3300049742 Bacteria 2102
192 Ga0501080_0177594 3300049742 Bacteria 1961
193 Ga0501080_0245983 3300049742 Bacteria 1631
194 Ga0501080_0392563 3300049742 Bacteria 1249
195 Ga0501083_0008800 3300049744 Bacteria 7127
196 Ga0501083_0011674 3300049744 Bacteria 6158
197 Ga0501083_0032074 3300049744 Bacteria 3604
198 Ga0501083_0042266 3300049744 Bacteria 3091
199 Ga0501083_0137364 3300049744 Bacteria 1601
200 Ga0501035_0037360 3300049822 Bacteria 4398
201 Ga0501035_0353774 3300049822 Bacteria 1228
202 Ga0501044_0025899 3300049823 Bacteria 6217
203 Ga0501044_0160354 3300049823 Bacteria 2226
204 Ga0501045_0002143 3300049824 Bacteria 13353
205 Ga0501045_0078175 3300049824 Bacteria 2439
206 nmdc:mga03683_1201_c1 3300050489 Bacteria 5724
207 nmdc:mga03683_66248_c2 3300050489 Bacteria 1244
208 nmdc:mga0k408_158026_c1 3300050493 Bacteria 1350
209 nmdc:mga0k408_74916_c1 3300050493 Bacteria 1977
210 nmdc:mga06z11_20257_c1 3300050494 Bacteria 3072
211 nmdc:mga06z11_203952_c1 3300050494 Bacteria 1149
212 nmdc:mga06z11_5533_c1 3300050494 Bacteria 5076
213 nmdc:mga06z11_96979_c2 3300050494 Bacteria 1312
214 nmdc:mga07m45_5480_c1 3300050496 Bacteria 6320
215 nmdc:mga07m45_69476_c1 3300050496 Bacteria 2002
216 nmdc:mga0qj67_23425_c1 3300050509 Bacteria 4750
217 nmdc:mga0qj67_533599_c1 3300050509 Bacteria 942
218 nmdc:mga08y16_179_c1 3300050511 Bacteria 56078
219 nmdc:mga0sz30_1912_c1 3300050516 Bacteria 7440
220 nmdc:mga0sz30_730_c1 3300050516 Bacteria 12031
221 Ga0500578_0258367 3300053086 Bacteria 1047
222 Ga0500646_0004016 3300053090 Bacteria 3741
223 Ga0500651_0021798 3300053093 Bacteria 3998
224 Ga0500651_0086004 3300053093 Bacteria 1943
225 Ga0500641_0001486 3300053096 Bacteria 8364
226 Ga0500555_018710 3300053103 Bacteria 1997
227 Ga0500595_001358 3300053119 Bacteria 13165
228 Ga0500568_0005844 3300053139 Bacteria 6272
229 Ga0500568_0067783 3300053139 Bacteria 1370
230 Ga0500588_0005034 3300053146 Bacteria 2907
231 Ga0500588_0037291 3300053146 Bacteria 1442
232 Ga0500616_0002006 3300053153 Bacteria 18026
233 Ga0500552_000907 3300053733 Bacteria 2797
234 Ga0501084_0005507 3300054114 Bacteria 10393
235 Ga0501084_0055135 3300054114 Bacteria 3326
236 Ga0501084_0089765 3300054114 Bacteria 2580
237 Ga0501084_0128222 3300054114 Bacteria 2135
238 Ga0501082_0137168 3300060353 Bacteria 2122
239 Ga0501082_0329080 3300060353 Bacteria 1331
240 Ga0501082_0482542 3300060353 Bacteria 1083
241 Ga0530510_0045256 3300061734 Bacteria 3179

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300035115 Ga0373941_0056323 Ga0373941_0056323_251_1045 254
2 3300050509 nmdc:mga0qj67_533599_c1 nmdc:mga0qj67_533599_c1_141_923 254
3 3300050489 nmdc:mga03683_66248_c2 nmdc:mga03683_66248_c2_413_1234 256
4 iso_pu_bacteria 2883354860 2883356193 263
5 3300049571 Ga0501034_0083663 Ga0501034_0083663_1782_2627 275
6 3300005445 Ga0070708_100433697 Ga0070708_1004336972 276
7 3300039438 Ga0436360_0583423 Ga0436360_0583423_1032_1886 276
8 3300025926 Ga0207659_10107116 Ga0207659_101071163 282
9 3300035114 Ga0373939_0073732 Ga0373939_0073732_12_953 282
10 3300049742 Ga0501080_0245983 Ga0501080_0245983_595_1461 282
11 3300049742 Ga0501080_0392563 Ga0501080_0392563_46_927 282
12 3300049744 Ga0501083_0137364 Ga0501083_0137364_652_1518 282
13 3300053119 Ga0500595_001358 Ga0500595_001358_76_927 282
14 3300060353 Ga0501082_0329080 Ga0501082_0329080_135_1001 282
15 3300005981 Ga0081538_10004905 Ga0081538_100049059 285
16 3300005981 Ga0081538_10031424 Ga0081538_100314242 285
17 3300031852 Ga0307410_10063986 Ga0307410_100639863 286
18 3300049576 Ga0501040_0069156 Ga0501040_0069156_433_1362 286
19 3300049577 Ga0501041_0068068 Ga0501041_0068068_1050_1979 286
20 3300049582 Ga0501048_0153367 Ga0501048_0153367_685_1614 286
21 3300049588 Ga0501072_0185209 Ga0501072_0185209_376_1305 286
22 3300049744 Ga0501083_0042266 Ga0501083_0042266_353_1282 286
23 3300049824 Ga0501045_0002143 Ga0501045_0002143_11893_12822 286
24 3300049824 Ga0501045_0078175 Ga0501045_0078175_1338_2267 286
25 3300021384 Ga0213876_10127565 Ga0213876_101275651 289
26 3300039437 Ga0436365_0378078 Ga0436365_0378078_85_966 289
27 3300039437 Ga0436365_1626345 Ga0436365_1626345_3668_4549 289
28 3300005445 Ga0070708_100235998 Ga0070708_1002359982 290
29 3300005518 Ga0070699_100177442 Ga0070699_1001774422 290
30 3300031344 Ga0265316_10078228 Ga0265316_100782282 291
31 3300039062 Ga0400483_289026 Ga0400483_289026_408_1367 291
32 3300053139 Ga0500568_0005844 Ga0500568_0005844_4224_5111 291
33 3300005468 Ga0070707_100335029 Ga0070707_1003350292 292
34 3300025922 Ga0207646_10057090 Ga0207646_100570902 292
35 3300021361 Ga0213872_10021650 Ga0213872_100216502 293
36 3300031665 Ga0316575_10024234 Ga0316575_100242343 293
37 3300031727 Ga0316576_10116298 Ga0316576_101162981 293
38 3300032133 Ga0316583_10034289 Ga0316583_100342892 293
39 3300039447 Ga0436361_0712557 Ga0436361_0712557_1288_2190 293
40 3300044712 Ga0453684_0269317 Ga0453684_0269317_1013_1933 294
41 3300005329 Ga0070683_100019003 Ga0070683_1000190035 295
42 3300005336 Ga0070680_100140506 Ga0070680_1001405061 295
43 3300005344 Ga0070661_100008704 Ga0070661_1000087042 295
44 3300005535 Ga0070684_100038433 Ga0070684_1000384332 295
45 3300005539 Ga0068853_100129422 Ga0068853_1001294221 295
46 3300005563 Ga0068855_100054774 Ga0068855_1000547742 295
47 3300005564 Ga0070664_100074831 Ga0070664_1000748313 295
48 3300005616 Ga0068852_100019871 Ga0068852_1000198716 295
49 3300009545 Ga0105237_10107352 Ga0105237_101073523 295
50 3300009551 Ga0105238_10170231 Ga0105238_101702313 295
51 3300013307 Ga0157372_10366791 Ga0157372_103667913 295
52 3300025904 Ga0207647_10074613 Ga0207647_100746132 295
53 3300025924 Ga0207694_10082152 Ga0207694_100821522 295
54 3300025945 Ga0207679_10048120 Ga0207679_100481202 295
55 3300025949 Ga0207667_10084056 Ga0207667_100840562 295
56 3300025981 Ga0207640_10076634 Ga0207640_100766343 295
57 3300026041 Ga0207639_10137784 Ga0207639_101377842 295
58 3300026116 Ga0207674_10341385 Ga0207674_103413852 295
59 3300028379 Ga0268266_10024570 Ga0268266_100245702 295
60 3300037312 Ga0395899_0104933 Ga0395899_0104933_581_1501 295
61 3300037418 Ga0395900_0016961 Ga0395900_0016961_499_1419 295
62 3300037418 Ga0395900_0489539 Ga0395900_0489539_98_1018 295
63 3300039453 Ga0436362_0003163 Ga0436362_0003163_222_1142 295
64 3300044694 Ga0466963_0016474 Ga0466963_0016474_1426_2346 295
65 3300045976 Ga0466967_0027679 Ga0466967_0027679_2171_3091 295
66 3300021361 Ga0213872_10025072 Ga0213872_100250722 296
67 3300031238 Ga0265332_10020001 Ga0265332_100200014 296
68 3300031711 Ga0265314_10011931 Ga0265314_100119313 296
69 3300039447 Ga0436361_0585330 Ga0436361_0585330_1888_2799 296
70 3300005434 Ga0070709_10018127 Ga0070709_100181274 297
71 3300005467 Ga0070706_100246909 Ga0070706_1002469091 297
72 3300005548 Ga0070665_100299963 Ga0070665_1002999632 297
73 3300005841 Ga0068863_100259418 Ga0068863_1002594182 297
74 3300005842 Ga0068858_100294353 Ga0068858_1002943532 297
75 3300005937 Ga0081455_10009019 Ga0081455_100090192 297
76 3300014325 Ga0163163_10645377 Ga0163163_106453771 297
77 3300025302 Ga0207426_1013910 Ga0207426_10139102 297
78 3300025910 Ga0207684_10092008 Ga0207684_100920081 297
79 3300025928 Ga0207700_10069020 Ga0207700_100690203 297
80 3300026121 Ga0207683_10005498 Ga0207683_100054982 297
81 3300028379 Ga0268266_10005797 Ga0268266_100057972 297
82 3300028379 Ga0268266_10264621 Ga0268266_102646212 297
83 3300028573 Ga0265334_10005522 Ga0265334_100055223 297
84 3300035114 Ga0373939_0022464 Ga0373939_0022464_228_1154 297
85 3300035691 Ga0373931_0062064 Ga0373931_0062064_348_1274 297
86 3300036401 Ga0373937_0092721 Ga0373937_0092721_906_1832 297
87 3300037068 Ga0373925_0294396 Ga0373925_0294396_144_1082 297
88 3300039437 Ga0436365_0379158 Ga0436365_0379158_811_1731 297
89 3300049571 Ga0501034_0010991 Ga0501034_0010991_7530_8471 297
90 3300049571 Ga0501034_0021056 Ga0501034_0021056_3817_4743 297
91 3300049571 Ga0501034_0323354 Ga0501034_0323354_434_1360 297
92 3300005327 Ga0070658_10046691 Ga0070658_100466913 298
93 3300005336 Ga0070680_100021595 Ga0070680_1000215952 298
94 3300005341 Ga0070691_10003029 Ga0070691_100030299 298
95 3300005458 Ga0070681_10038179 Ga0070681_100381793 298
96 3300005471 Ga0070698_100007157 Ga0070698_1000071572 298
97 3300005563 Ga0068855_100008504 Ga0068855_1000085048 298
98 3300005614 Ga0068856_100124766 Ga0068856_1001247663 298
99 3300005937 Ga0081455_10003150 Ga0081455_100031503 298
100 3300005937 Ga0081455_10006796 Ga0081455_1000679614 298
101 3300005985 Ga0081539_10001160 Ga0081539_1000116048 298
102 3300005985 Ga0081539_10006140 Ga0081539_1000614013 298
103 3300006038 Ga0075365_10101086 Ga0075365_101010862 298
104 3300006177 Ga0075362_10016353 Ga0075362_100163532 298
105 3300006178 Ga0075367_10065656 Ga0075367_100656562 298
106 3300006186 Ga0075369_10066582 Ga0075369_100665821 298
107 3300006195 Ga0075366_10102098 Ga0075366_101020982 298
108 3300009093 Ga0105240_10002673 Ga0105240_100026732 298
109 3300013105 Ga0157369_10365565 Ga0157369_103655652 298
110 3300025909 Ga0207705_10009474 Ga0207705_100094746 298
111 3300025913 Ga0207695_10062230 Ga0207695_100622302 298
112 3300025949 Ga0207667_10013955 Ga0207667_100139552 298
113 3300031239 Ga0265328_10061894 Ga0265328_100618942 298
114 3300031249 Ga0265339_10015339 Ga0265339_100153395 298
115 3300031250 Ga0265331_10003194 Ga0265331_100031948 298
116 3300031251 Ga0265327_10000294 Ga0265327_1000029487 298
117 3300031595 Ga0265313_10000490 Ga0265313_1000049028 298
118 3300031712 Ga0265342_10007511 Ga0265342_100075112 298
119 3300032002 Ga0307416_100081842 Ga0307416_1000818423 298
120 3300039438 Ga0436360_1205218 Ga0436360_1205218_741_1670 298
121 3300039447 Ga0436361_0566593 Ga0436361_0566593_3055_3984 298
122 3300050489 nmdc:mga03683_1201_c1 nmdc:mga03683_1201_c1_1313_2242 298
123 3300050493 nmdc:mga0k408_158026_c1 nmdc:mga0k408_158026_c1_329_1255 298
124 3300050493 nmdc:mga0k408_74916_c1 nmdc:mga0k408_74916_c1_728_1657 298
125 3300050494 nmdc:mga06z11_20257_c1 nmdc:mga06z11_20257_c1_1141_2070 298
126 3300050494 nmdc:mga06z11_203952_c1 nmdc:mga06z11_203952_c1_46_972 298
127 3300050494 nmdc:mga06z11_96979_c2 nmdc:mga06z11_96979_c2_171_1100 298
128 3300050496 nmdc:mga07m45_5480_c1 nmdc:mga07m45_5480_c1_1484_2413 298
129 3300050496 nmdc:mga07m45_69476_c1 nmdc:mga07m45_69476_c1_53_1009 298
130 3300050516 nmdc:mga0sz30_730_c1 nmdc:mga0sz30_730_c1_1870_2799 298
131 3300053093 Ga0500651_0086004 Ga0500651_0086004_330_1268 298
132 3300053096 Ga0500641_0001486 Ga0500641_0001486_2703_3629 298
133 3300005518 Ga0070699_100231482 Ga0070699_1002314821 299
134 3300005536 Ga0070697_100491063 Ga0070697_1004910631 299
135 3300006186 Ga0075369_10004702 Ga0075369_100047026 299
136 3300007265 Ga0099794_10105303 Ga0099794_101053031 299
137 3300013104 Ga0157370_10040041 Ga0157370_100400414 299
138 3300027876 Ga0209974_10036290 Ga0209974_100362902 299
139 3300029957 Ga0265324_10001335 Ga0265324_100013352 299
140 3300031239 Ga0265328_10010360 Ga0265328_100103602 299
141 3300031250 Ga0265331_10000517 Ga0265331_1000051715 299
142 3300031250 Ga0265331_10017407 Ga0265331_100174072 299
143 3300031251 Ga0265327_10102923 Ga0265327_101029231 299
144 3300031344 Ga0265316_10028813 Ga0265316_100288134 299
145 3300031595 Ga0265313_10000788 Ga0265313_1000078834 299
146 3300031711 Ga0265314_10033634 Ga0265314_100336343 299
147 3300037312 Ga0395899_0042624 Ga0395899_0042624_1104_2036 299
148 3300037466 Ga0395898_0029160 Ga0395898_0029160_314_1246 299
149 3300038443 Ga0395901_0000583 Ga0395901_0000583_616_1548 299
150 3300042876 Ga0451577_0071088 Ga0451577_0071088_1857_2771 299
151 3300044673 Ga0453683_0020217 Ga0453683_0020217_2051_2974 299
152 3300045051 Ga0451576_0000426 Ga0451576_0000426_75751_76665 299
153 3300045051 Ga0451576_0064137 Ga0451576_0064137_1629_2552 299
154 3300045051 Ga0451576_0181819 Ga0451576_0181819_744_1661 299
155 3300049742 Ga0501080_0156908 Ga0501080_0156908_825_1727 299
156 3300050494 nmdc:mga06z11_5533_c1 nmdc:mga06z11_5533_c1_2289_3224 299
157 3300050516 nmdc:mga0sz30_1912_c1 nmdc:mga0sz30_1912_c1_3426_4361 299
158 3300053153 Ga0500616_0002006 Ga0500616_0002006_16324_17256 299
159 3300053733 Ga0500552_000907 Ga0500552_000907_1786_2718 299
160 iso_pu_bacteria 2842333319 2842335954 299
161 iso_pu_bacteria 2883291878 2883293237 299
162 3300003215 JGI25153J46596_10000042 JGI25153J46596_1000004271 300
163 3300003762 Ga0055542_1015803 Ga0055542_10158031 300
164 3300005547 Ga0070693_100248005 Ga0070693_1002480051 300
165 3300005842 Ga0068858_100118290 Ga0068858_1001182903 300
166 3300005843 Ga0068860_100051162 Ga0068860_1000511624 300
167 3300006931 Ga0097620_100117755 Ga0097620_1001177552 300
168 3300009094 Ga0111539_10000097 Ga0111539_1000009744 300
169 3300009545 Ga0105237_10465806 Ga0105237_104658062 300
170 3300025254 Ga0209148_1002201 Ga0209148_10022012 300
171 3300025272 Ga0209455_1000872 Ga0209455_10008721 300
172 3300025297 Ga0209758_1000110 Ga0209758_1000110133 300
173 3300025297 Ga0209758_1027672 Ga0209758_10276722 300
174 3300025297 Ga0209758_1053990 Ga0209758_10539902 300
175 3300025298 Ga0209050_1014517 Ga0209050_10145175 300
176 3300025303 Ga0209051_1031112 Ga0209051_10311123 300
177 3300025304 Ga0209257_1000407 Ga0209257_10004077 300
178 3300026035 Ga0207703_10171631 Ga0207703_101716313 300
179 3300027907 Ga0207428_10001860 Ga0207428_100018607 300
180 3300028380 Ga0268265_10008132 Ga0268265_100081326 300
181 3300028381 Ga0268264_10039779 Ga0268264_100397792 300
182 3300031456 Ga0307513_10355531 Ga0307513_103555312 300
183 3300031456 Ga0307513_10416215 Ga0307513_104162152 300
184 3300035113 Ga0373936_0064978 Ga0373936_0064978_198_1130 300
185 3300045051 Ga0451576_0027941 Ga0451576_0027941_4160_5095 300
186 3300049568 Ga0501031_0029853 Ga0501031_0029853_2193_3179 300
187 3300049569 Ga0501032_0003237 Ga0501032_0003237_6727_7632 300
188 3300049570 Ga0501033_0092839 Ga0501033_0092839_1183_2088 300
189 3300049571 Ga0501034_0020823 Ga0501034_0020823_3683_4588 300
190 3300049572 Ga0501036_0045399 Ga0501036_0045399_2347_3333 300
191 3300049573 Ga0501037_0008942 Ga0501037_0008942_2793_3698 300
192 3300049573 Ga0501037_0058524 Ga0501037_0058524_1023_2009 300
193 3300049574 Ga0501038_0001830 Ga0501038_0001830_5017_5922 300
194 3300049574 Ga0501038_0032374 Ga0501038_0032374_2546_3532 300
195 3300049575 Ga0501039_0029011 Ga0501039_0029011_464_1369 300
196 3300049575 Ga0501039_0181491 Ga0501039_0181491_248_1153 300
197 3300049576 Ga0501040_0010820 Ga0501040_0010820_1079_2065 300
198 3300049577 Ga0501041_0027693 Ga0501041_0027693_1045_2031 300
199 3300049579 Ga0501043_0003061 Ga0501043_0003061_6725_7630 300
200 3300049579 Ga0501043_0152215 Ga0501043_0152215_327_1232 300
201 3300049580 Ga0501046_0000538 Ga0501046_0000538_6949_7854 300
202 3300049581 Ga0501047_0024369 Ga0501047_0024369_869_1774 300
203 3300049581 Ga0501047_0173681 Ga0501047_0173681_1013_1918 300
204 3300049582 Ga0501048_0138329 Ga0501048_0138329_437_1342 300
205 3300049584 Ga0501068_0010475 Ga0501068_0010475_2892_3797 300
206 3300049584 Ga0501068_0027558 Ga0501068_0027558_2372_3277 300
207 3300049585 Ga0501069_0014007 Ga0501069_0014007_545_1450 300
208 3300049586 Ga0501070_0017667 Ga0501070_0017667_4071_4976 300
209 3300049586 Ga0501070_0443544 Ga0501070_0443544_107_1012 300
210 3300049587 Ga0501071_0017146 Ga0501071_0017146_1774_2760 300
211 3300049589 Ga0501073_0001283 Ga0501073_0001283_11134_12039 300
212 3300049589 Ga0501073_0006938 Ga0501073_0006938_7335_8240 300
213 3300049590 Ga0501074_0006735 Ga0501074_0006735_2809_3714 300
214 3300049590 Ga0501074_0020432 Ga0501074_0020432_20_1006 300
215 3300049591 Ga0501075_0016148 Ga0501075_0016148_4270_5256 300
216 3300049592 Ga0501076_0028845 Ga0501076_0028845_1239_2225 300
217 3300049593 Ga0501077_0009475 Ga0501077_0009475_3563_4549 300
218 3300049741 Ga0501079_0027872 Ga0501079_0027872_2956_3942 300
219 3300049742 Ga0501080_0007402 Ga0501080_0007402_7197_8102 300
220 3300049742 Ga0501080_0017603 Ga0501080_0017603_3658_4563 300
221 3300049742 Ga0501080_0177594 Ga0501080_0177594_916_1902 300
222 3300049744 Ga0501083_0008800 Ga0501083_0008800_5221_6126 300
223 3300049744 Ga0501083_0011674 Ga0501083_0011674_1625_2530 300
224 3300049744 Ga0501083_0032074 Ga0501083_0032074_417_1322 300
225 3300049822 Ga0501035_0037360 Ga0501035_0037360_3235_4221 300
226 3300049822 Ga0501035_0353774 Ga0501035_0353774_218_1123 300
227 3300049823 Ga0501044_0025899 Ga0501044_0025899_1761_2666 300
228 3300049823 Ga0501044_0160354 Ga0501044_0160354_1216_2121 300
229 3300050509 nmdc:mga0qj67_23425_c1 nmdc:mga0qj67_23425_c1_1682_2620 300
230 3300050511 nmdc:mga08y16_179_c1 nmdc:mga08y16_179_c1_47574_48488 300
231 3300053086 Ga0500578_0258367 Ga0500578_0258367_65_970 300
232 3300053090 Ga0500646_0004016 Ga0500646_0004016_2237_3139 300
233 3300053093 Ga0500651_0021798 Ga0500651_0021798_510_1412 300
234 3300053103 Ga0500555_018710 Ga0500555_018710_307_1209 300
235 3300053139 Ga0500568_0067783 Ga0500568_0067783_71_973 300
236 3300053146 Ga0500588_0005034 Ga0500588_0005034_1091_1996 300
237 3300053146 Ga0500588_0037291 Ga0500588_0037291_109_1011 300
238 3300054114 Ga0501084_0005507 Ga0501084_0005507_1354_2340 300
239 3300054114 Ga0501084_0055135 Ga0501084_0055135_476_1381 300
240 3300054114 Ga0501084_0089765 Ga0501084_0089765_75_1052 300
241 3300054114 Ga0501084_0128222 Ga0501084_0128222_803_1708 300
242 3300060353 Ga0501082_0137168 Ga0501082_0137168_218_1123 300
243 3300060353 Ga0501082_0482542 Ga0501082_0482542_128_1033 300
244 3300061734 Ga0530510_0045256 Ga0530510_0045256_916_1902 300

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03308

MeaB

Methylmalonyl Co-A mutase-associated GTPase MeaB

18

287

0.93

PF03266

NTPase_1

NTPase

51

125

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
8gju-assembly1.cif.gz_D crystal structure of human methylmalonyl-coa mutase (mmut) in complex with methylmalonic acidemia type a protein (mmaa), coenzyme a, and gdp 0.8753 4 272
4jyb-assembly1.cif.gz_A meab, a bacterial homolog of mmaa, bound to gmppnp 0.8503 4 272
3md0-assembly1.cif.gz_A-2 crystal structure of arginine/ornithine transport system atpase from mycobacterium tuberculosis bound to gdp (a ras-like gtpase superfamily protein) 0.8472 4 272
2qm7-assembly1.cif.gz_B meab, a bacterial homolog of mmaa, bound to gdp 0.8468 4 276
4jyc-assembly1.cif.gz_D meab, a bacterial homolog of mmaa, in its apo form 0.8443 4 272
ID Description Score Start End Superfamily
2wwwA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8699 42 247 3.40.50.300
af_E9AG50_57_268_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8667 41 245 3.40.50.300
4lc1B02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8555 44 248 3.40.50.300
4lc1B02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8391 44 248 3.40.50.300
af_E9AG50_57_268_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8366 41 245 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A7X2FTJ3-F1-model_v4 Methylmalonyl Co-A mutase-associated GTPase MeaB 0.9593 3 299 GO:0003924
GO:0005525
GO:0005737
GO:0016887
AF-A0A257XTP7-F1-model_v4 Methylmalonyl Co-A mutase-associated GTPase MeaB 0.9525 3 230 GO:0005525
GO:0016787
AF-A0A2H6BHL5-F1-model_v4 ArgK protein 0.9504 3 299 GO:0003924
GO:0005525
GO:0005737
GO:0016887
AF-A0A5A7MPN7-F1-model_v4 AAA+ ATPase domain-containing protein 0.9481 2 169 GO:0005525
GO:0016887
AF-A0A7X2FTJ3-F1-model_v4 Methylmalonyl Co-A mutase-associated GTPase MeaB 0.9468 3 299 GO:0003924
GO:0005525
GO:0005737
GO:0016887

Feature Viewer

pLDDT pTM Quality
85.06 0.89 High
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Predicted Structure (AlphaFold2)

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