F356872

General Info

Members Datasets Scaffolds Average Seq Length
244 161 488 296

Family's Representative Sequence

Representative Sequence 3300049673|Ga0501240_000108|Ga0501240_000108_361_1227
Length 288
Sequence MLIERFINYLQYEKRFSLHTISAYSQDLQHFQKFLHPHETDIQSCDHFLIRSWMVALLEQNQEARTVQRRLSALRTFYKFLEREKLIEVNPTLQIKAPKVSKRLPVFVEDAKLNRLLDEHAFFSDDFEGARDKAVIELLFGTGIRLAELITLKVNDINTYEQTIKVFGKRSKERIIPINVTLMNTLSTYLKSRADQSDSLFVTNDGKGAYPKMIYRIVNKYLGYISTIEKRSPHILRHSFATSLLNKGADLNAIKELLGHASLAATQVYTHNSVERLKTIYKQAHPKA

Samples

Sample ID Description Type Environment
1 3300049673 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I13_A_3_drought Metagenome Rhizosphere
2 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
3 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
4 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
5 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
6 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
7 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
8 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
9 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
10 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
11 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
12 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
13 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
14 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
15 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
16 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
17 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
18 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
19 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
20 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
21 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
22 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
23 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
24 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
25 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
26 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
27 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
28 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
29 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
30 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
31 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
32 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
33 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
34 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
35 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
36 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
37 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
38 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
39 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
40 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
41 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
42 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
43 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
44 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
45 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
46 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
47 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
48 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
49 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
50 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
51 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
52 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
53 3300015682 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A01 Metagenome Rhizosphere
54 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
55 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
56 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
57 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
58 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
59 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
60 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
61 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
62 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
63 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
84 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
85 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
86 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
87 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
88 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
89 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
90 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
91 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
92 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
93 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
94 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
95 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
96 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
97 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
98 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
99 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
100 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
101 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
102 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
103 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
104 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
105 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
106 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
107 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
108 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
109 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
110 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
111 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
112 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
113 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
114 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
115 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
116 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
117 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
118 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
119 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
120 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
121 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
122 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
123 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
124 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
125 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
126 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
127 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
128 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
129 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
130 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
131 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
132 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
133 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
134 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
135 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
136 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
137 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
138 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
139 2585427687 Pedobacter borealis DSM 19626 Isolate Rhizosphere
140 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
141 2738541284 Pedobacter sp. YR016 Isolate Unclassified
142 2738541302 Pedobacter sp. CF074 Isolate Unclassified
143 2738543023 Pedobacter sp. OK628 Isolate Unclassified
144 2739367651 Pedobacter sp. OK291 Isolate Unclassified
145 2739367656 Pedobacter sp. CF523 Isolate Unclassified
146 2739367663 Pedobacter sp. YR510 Isolate Unclassified
147 2775506987 Pedobacter ginsengisoli T01R-27 Isolate Unclassified
148 2818991437 Pedobacter terrae 518 Isolate Unclassified
149 2842903701 Olivibacter sp. R-72191 Isolate Unclassified
150 2849281842 Pedobacter sp. AK013 Isolate Rhizosphere
151 2852627209 Pedobacter sp. AK017 Isolate Rhizosphere
152 2902048731 Pedobacter ureilyticus THG-T11 Isolate Rhizosphere
153 2904445276 Pedobacter terrae 1734 Isolate Rhizosphere
154 2919186247 Pedobacter africanus 2697 Isolate Rhizosphere
155 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
156 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
157 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
158 2939664404 Pedobacter africanus 2990 Isolate Rhizosphere
159 2945997725 Pedobacter sp. W3I1 Isolate Rhizosphere
160 2954016120 Flavobacterium sp. W4I14 Isolate Rhizosphere
161 2977232053 Mucilaginibacter terrae SORGH_AS 422 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 90.57
Metatranscriptomes 0
Isolates 9.43

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.3
Nodule 0
Rhizoplane 0.41
Rhizosphere 74.18
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501240_000108 3300049673 Bacteria 5364
2 JGI24739J22299_10065372 3300001989 Bacteria 1141
3 JGI24737J22298_10000614 3300001990 Bacteria 12575
4 JGI24737J22298_10000765 3300001990 Bacteria 11362
5 JGI24737J22298_10016588 3300001990 Bacteria 2377
6 JGI24735J21928_10000009 3300002067 Bacteria 247425
7 JGI25162J39368_1000120 3300002737 Bacteria 86031
8 JGI25157J39369_1006802 3300002741 Bacteria 1705
9 JGI25150J39212_1000001 3300002774 Bacteria 1318726
10 JGI25151J46595_10000001 3300003187 Bacteria 887211
11 JGI25153J46596_10000001 3300003215 Bacteria 748985
12 rootH1_10041307 3300003316 Bacteria 1038
13 rootH1_10137887 3300003316 Bacteria 1513
14 rootH2_10073704 3300003320 Bacteria 1729
15 rootH2_10145293 3300003320 Bacteria 1253
16 rootL2_10027602 3300003322 Bacteria 7785
17 rootH1_10055270 3300003323 Bacteria 10429
18 rootH1_10089421 3300003323 Bacteria 2860
19 rootH1_10178994 3300003323 Bacteria 1752
20 Ga0065714_10081513 3300005288 Bacteria 2368
21 Ga0065714_10105688 3300005288 Bacteria 1562
22 Ga0065704_10071822 3300005289 Bacteria 9825
23 Ga0065704_10198759 3300005289 Bacteria 1095
24 Ga0070658_10000014 3300005327 Bacteria 244978
25 Ga0070658_10100444 3300005327 Bacteria 2391
26 Ga0070676_10004106 3300005328 Bacteria 7650
27 Ga0068869_100201652 3300005334 Bacteria 1569
28 Ga0068868_100069307 3300005338 Bacteria 2810
29 Ga0070671_100045108 3300005355 Bacteria 3664
30 Ga0070659_100000402 3300005366 Bacteria 32771
31 Ga0070659_100051269 3300005366 Bacteria 3245
32 Ga0070659_100212416 3300005366 Bacteria 1595
33 Ga0070663_100133403 3300005455 Bacteria 1888
34 Ga0070678_100001822 3300005456 Bacteria 11482
35 Ga0068867_100001197 3300005459 Bacteria 17799
36 Ga0068853_100136213 3300005539 Bacteria 2201
37 Ga0070665_100000032 3300005548 Bacteria 333352
38 Ga0068855_100091999 3300005563 Bacteria 3498
39 Ga0068855_100158892 3300005563 Bacteria 2567
40 Ga0068852_100004662 3300005616 Bacteria 9721
41 Ga0068863_100323149 3300005841 Bacteria 1499
42 Ga0075366_10020556 3300006195 Bacteria 3832
43 Ga0075366_10134629 3300006195 Bacteria 1492
44 Ga0097621_100000057 3300006237 Bacteria 58430
45 Ga0075370_10117302 3300006353 Bacteria 1548
46 Ga0068871_100000094 3300006358 Bacteria 52461
47 Ga0068865_100000200 3300006881 Bacteria 33423
48 Ga0105240_10000082 3300009093 Bacteria 195184
49 Ga0105240_10026059 3300009093 Bacteria 7676
50 Ga0105240_10184187 3300009093 Bacteria 2461
51 Ga0105240_10290440 3300009093 Bacteria 1875
52 Ga0105245_10053242 3300009098 Bacteria 3632
53 Ga0105242_10050379 3300009176 Bacteria 3390
54 Ga0105237_10001321 3300009545 Bacteria 32889
55 Ga0105237_10009919 3300009545 Bacteria 10162
56 Ga0105237_10012788 3300009545 Bacteria 8828
57 Ga0105237_10085054 3300009545 Bacteria 3152
58 Ga0105238_10003742 3300009551 Bacteria 15125
59 Ga0105249_10400978 3300009553 Bacteria 1402
60 Ga0105239_10000001 3300010375 Bacteria 617353
61 Ga0105239_10001363 3300010375 Bacteria 32814
62 Ga0105239_10116645 3300010375 Bacteria 2963
63 Ga0105239_10117335 3300010375 Bacteria 2954
64 Ga0105239_10164458 3300010375 Bacteria 2480
65 Ga0105239_10254445 3300010375 Bacteria 1973
66 Ga0105239_10259255 3300010375 Bacteria 1954
67 Ga0157373_10000175 3300013100 Bacteria 52539
68 Ga0157373_10002244 3300013100 Bacteria 14631
69 Ga0157373_10007333 3300013100 Bacteria 8213
70 Ga0157373_10095040 3300013100 Bacteria 2098
71 Ga0157371_10000276 3300013102 Bacteria 69547
72 Ga0157371_10002095 3300013102 Bacteria 19477
73 Ga0157371_10251098 3300013102 Bacteria 1273
74 Ga0157370_10018734 3300013104 Bacteria 6960
75 Ga0157370_10066375 3300013104 Bacteria 3412
76 Ga0157370_10105905 3300013104 Bacteria 2632
77 Ga0157370_10351455 3300013104 Bacteria 1359
78 Ga0157369_10001799 3300013105 Bacteria 25953
79 Ga0157374_10061449 3300013296 Bacteria 3518
80 Ga0157374_10076968 3300013296 Bacteria 3156
81 Ga0157374_10142191 3300013296 Bacteria 2330
82 Ga0157378_10072796 3300013297 Bacteria 3088
83 Ga0163162_10000052 3300013306 Bacteria 112651
84 Ga0163162_10004554 3300013306 Bacteria 13359
85 Ga0163162_10021730 3300013306 Bacteria 6319
86 Ga0163162_10157628 3300013306 Bacteria 2391
87 Ga0163162_10213814 3300013306 Bacteria 2058
88 Ga0163162_10282528 3300013306 Bacteria 1792
89 Ga0157372_10000020 3300013307 Bacteria 208056
90 Ga0157372_10000254 3300013307 Bacteria 59194
91 Ga0157372_10004038 3300013307 Bacteria 15739
92 Ga0157372_10015618 3300013307 Bacteria 8142
93 Ga0182008_10000030 3300014497 Bacteria 169168
94 Ga0182008_10000363 3300014497 Bacteria 35337
95 Ga0157376_10095846 3300014969 Bacteria 2581
96 Ga0182006_1000872 3300015261 Bacteria 20250
97 Ga0183373_1001 3300015682 Bacteria 1410374
98 Ga0163161_10031402 3300017792 Bacteria 3784
99 Ga0163161_10283711 3300017792 Bacteria 1300
100 Ga0213872_10020332 3300021361 Bacteria 3059
101 Ga0209437_100143 3300025233 Bacteria 164970
102 Ga0207425_1000002 3300025245 Bacteria 1362590
103 Ga0209026_1000663 3300025250 Bacteria 21055
104 Ga0209026_1003795 3300025250 Bacteria 4781
105 Ga0209026_1009640 3300025250 Bacteria 1875
106 Ga0209129_1000002 3300025258 Bacteria 1359086
107 Ga0209129_1005110 3300025258 Bacteria 4805
108 Ga0209233_1011941 3300025261 Bacteria 2539
109 Ga0209233_1016370 3300025261 Bacteria 2044
110 Ga0209025_1000004 3300025294 Bacteria 1361782
111 Ga0209758_1000006 3300025297 Bacteria 1359562
112 Ga0207647_10008662 3300025904 Bacteria 7268
113 Ga0207647_10063624 3300025904 Bacteria 2244
114 Ga0207645_10002281 3300025907 Bacteria 15210
115 Ga0207705_10000043 3300025909 Bacteria 181491
116 Ga0207695_10020448 3300025913 Bacteria 7580
117 Ga0207671_10002398 3300025914 Bacteria 20096
118 Ga0207671_10002869 3300025914 Bacteria 17871
119 Ga0207671_10005821 3300025914 Bacteria 11203
120 Ga0207644_10010204 3300025931 Bacteria 6189
121 Ga0207690_10000365 3300025932 Bacteria 30004
122 Ga0207690_10003759 3300025932 Bacteria 9000
123 Ga0207704_10000052 3300025938 Bacteria 80866
124 Ga0207689_10171808 3300025942 Bacteria 1787
125 Ga0207667_10037152 3300025949 Bacteria 5209
126 Ga0207667_10113392 3300025949 Bacteria 2795
127 Ga0207667_10370300 3300025949 Bacteria 1460
128 Ga0207712_10346183 3300025961 Bacteria 1234
129 Ga0207677_10091875 3300026023 Bacteria 2209
130 Ga0207639_10050764 3300026041 Bacteria 3151
131 Ga0207639_10123676 3300026041 Bacteria 2130
132 Ga0207639_10289479 3300026041 Bacteria 1444
133 Ga0207678_10097691 3300026067 Bacteria 2510
134 Ga0207702_10292030 3300026078 Bacteria 1545
135 Ga0207641_10663962 3300026088 Bacteria 1025
136 Ga0207648_10002788 3300026089 Bacteria 18537
137 Ga0207683_10010796 3300026121 Bacteria 7788
138 Ga0207698_10016030 3300026142 Bacteria 5040
139 Ga0268266_10000030 3300028379 Bacteria 417120
140 Ga0307517_10006168 3300028786 Bacteria 17856
141 Ga0307515_10008566 3300028794 Bacteria 19914
142 Ga0307515_10082620 3300028794 Bacteria 4151
143 Ga0307515_10393302 3300028794 Bacteria 1014
144 Ga0316183_1095896 3300030742 Bacteria 133299
145 Ga0316181_1158926 3300030744 Bacteria 6116
146 Ga0316182_1114895 3300030745 Bacteria 2540
147 Ga0307412_10000065 3300031911 Bacteria 122279
148 Ga0307414_10005403 3300032004 Bacteria 7034
149 Ga0307507_10000032 3300033179 Bacteria 194155
150 Ga0307510_10005905 3300033180 Bacteria 14606
151 Ga0395899_0000002 3300037312 Bacteria 1324310
152 Ga0395899_0000459 3300037312 Bacteria 46222
153 Ga0395899_0012421 3300037312 Bacteria 6524
154 Ga0395900_0000143 3300037418 Bacteria 120234
155 Ga0395900_0673821 3300037418 Bacteria 969
156 Ga0395898_0008044 3300037466 Bacteria 11177
157 Ga0395898_0245430 3300037466 Bacteria 1708
158 Ga0395905_0000045 3300037471 Bacteria 241370
159 Ga0395905_0000765 3300037471 Bacteria 42351
160 Ga0395901_0002501 3300038443 Bacteria 18608
161 Ga0395901_0035978 3300038443 Bacteria 5116
162 Ga0395901_0134345 3300038443 Bacteria 2600
163 Ga0436361_0542797 3300039447 Bacteria 4744
164 Ga0439448_0000810 3300042005 Bacteria 7615
165 Ga0466966_0003065 3300044684 Bacteria 11018
166 Ga0495629_0085265 3300046459 Bacteria 2204
167 Ga0495651_0078117 3300046462 Bacteria 2504
168 Ga0495650_0000594 3300046471 Bacteria 49931
169 Ga0495585_0000014 3300046492 Bacteria 187513
170 Ga0495585_0000212 3300046492 Bacteria 60869
171 Ga0495583_0045313 3300046506 Bacteria 2035
172 Ga0495583_0099162 3300046506 Bacteria 1245
173 Ga0495606_0000192 3300046507 Bacteria 107123
174 Ga0495606_0009018 3300046507 Bacteria 8525
175 Ga0495610_0001861 3300046512 Bacteria 18285
176 Ga0495616_0003380 3300046513 Bacteria 10230
177 Ga0495616_0004140 3300046513 Bacteria 9192
178 Ga0495631_0060780 3300046518 Bacteria 1639
179 Ga0495637_0037911 3300046520 Bacteria 2089
180 Ga0495644_0015940 3300046523 Bacteria 2879
181 Ga0495648_0004530 3300046524 Bacteria 11843
182 Ga0495609_0004058 3300046538 Bacteria 8162
183 Ga0495622_0042890 3300046557 Bacteria 2103
184 Ga0495633_0000021 3300046558 Bacteria 227171
185 Ga0495633_0024943 3300046558 Bacteria 2949
186 Ga0495633_0040843 3300046558 Bacteria 2208
187 Ga0495668_0000673 3300046616 Bacteria 41193
188 Ga0495668_0059027 3300046616 Bacteria 2117
189 Ga0495634_0112380 3300046642 Bacteria 1751
190 Ga0495625_0000021 3300046660 Bacteria 282133
191 Ga0495625_0002495 3300046660 Bacteria 19826
192 Ga0495625_0074156 3300046660 Bacteria 2384
193 Ga0495625_0226829 3300046660 Bacteria 1221
194 Ga0495658_0168178 3300046683 Bacteria 1355
195 Ga0495649_0000009 3300046694 Bacteria 451725
196 Ga0495649_0057462 3300046694 Bacteria 2098
197 Ga0495683_0064383 3300047323 Bacteria 1810
198 Ga0495687_001340 3300047443 Bacteria 22938
199 Ga0495685_032204 3300047447 Bacteria 1802
200 Ga0495686_0001816 3300047472 Bacteria 21559
201 Ga0495686_0020738 3300047472 Bacteria 4380
202 Ga0495686_0253891 3300047472 Bacteria 987
203 Ga0495614_0008785 3300048089 Bacteria 4487
204 Ga0496116_0169325 3300048919 Bacteria 1186
205 Ga0496126_0140316 3300048929 Bacteria 2081
206 Ga0495682_0004927 3300049460 Bacteria 5621
207 nmdc:mga0k408_350_c1 3300050493 Bacteria 25267
208 nmdc:mga0k408_4120_c1 3300050493 Bacteria 7721
209 nmdc:mga0k408_84967_c1 3300050493 Bacteria 1857
210 nmdc:mga07m45_112610_c1 3300050496 Bacteria 1568
211 Ga0500635_0002494 3300053080 Bacteria 4568
212 Ga0500635_0006180 3300053080 Bacteria 3187
213 Ga0500647_0130469 3300053091 Bacteria 1185
214 Ga0500651_0000124 3300053093 Bacteria 47212
215 Ga0500614_008259 3300053123 Bacteria 2207
216 Ga0500618_000080 3300053125 Bacteria 78455
217 Ga0500618_016552 3300053125 Bacteria 1845
218 Ga0500564_022907 3300053138 Bacteria 2860
219 Ga0500568_0016771 3300053139 Bacteria 3246
220 Ga0500622_0001219 3300053156 Bacteria 21136
221 Ga0500624_000925 3300053157 Bacteria 6183
222 2586209102 2585427687 Bacteria 5544917
223 2599479173 2599185184 Bacteria 6430550
224 2738763464 2738541284 Bacteria 5199923
225 2738851945 2738541302 Bacteria 5944758
226 2739303589 2738543023 Bacteria 6767879
227 2739590833 2739367651 Bacteria 6359826
228 2739617006 2739367656 Bacteria 5152243
229 2739647313 2739367663 Bacteria 5040914
230 2776615098 2775506987 Bacteria 5373360
231 2819546487 2818991437 Bacteria 5805520
232 2842905887 2842903701 Bacteria 6986368
233 2849286027 2849281842 Bacteria 6065644
234 2852629328 2852627209 Bacteria 5896285
235 2902052519 2902048731 Bacteria 4976191
236 2904446647 2904445276 Bacteria 5310396
237 2919190333 2919186247 Bacteria 6244071
238 2928082512 2928078545 Bacteria 6534839
239 2928148900 2928147474 Bacteria 6512076
240 2932086302 2932082852 Bacteria 6563563
241 2939668614 2939664404 Bacteria 6364494
242 2946002110 2945997725 Bacteria 6404843
243 2954019010 2954016120 Bacteria 6446024
244 2977233786 2977232053 Bacteria 5485925
245 Ga0501240_000108
246 JGI24739J22299_10065372
247 JGI24737J22298_10000614
248 JGI24737J22298_10000765
249 JGI24737J22298_10016588
250 JGI24735J21928_10000009
251 JGI25162J39368_1000120
252 JGI25157J39369_1006802
253 JGI25150J39212_1000001
254 JGI25151J46595_10000001
255 JGI25153J46596_10000001
256 rootH1_10041307
257 rootH1_10137887
258 rootH2_10073704
259 rootH2_10145293
260 rootL2_10027602
261 rootH1_10055270
262 rootH1_10089421
263 rootH1_10178994
264 Ga0065714_10081513
265 Ga0065714_10105688
266 Ga0065704_10071822
267 Ga0065704_10198759
268 Ga0070658_10000014
269 Ga0070658_10100444
270 Ga0070676_10004106
271 Ga0068869_100201652
272 Ga0068868_100069307
273 Ga0070671_100045108
274 Ga0070659_100000402
275 Ga0070659_100051269
276 Ga0070659_100212416
277 Ga0070663_100133403
278 Ga0070678_100001822
279 Ga0068867_100001197
280 Ga0068853_100136213
281 Ga0070665_100000032
282 Ga0068855_100091999
283 Ga0068855_100158892
284 Ga0068852_100004662
285 Ga0068863_100323149
286 Ga0075366_10020556
287 Ga0075366_10134629
288 Ga0097621_100000057
289 Ga0075370_10117302
290 Ga0068871_100000094
291 Ga0068865_100000200
292 Ga0105240_10000082
293 Ga0105240_10026059
294 Ga0105240_10184187
295 Ga0105240_10290440
296 Ga0105245_10053242
297 Ga0105242_10050379
298 Ga0105237_10001321
299 Ga0105237_10009919
300 Ga0105237_10012788
301 Ga0105237_10085054
302 Ga0105238_10003742
303 Ga0105249_10400978
304 Ga0105239_10000001
305 Ga0105239_10001363
306 Ga0105239_10116645
307 Ga0105239_10117335
308 Ga0105239_10164458
309 Ga0105239_10254445
310 Ga0105239_10259255
311 Ga0157373_10000175
312 Ga0157373_10002244
313 Ga0157373_10007333
314 Ga0157373_10095040
315 Ga0157371_10000276
316 Ga0157371_10002095
317 Ga0157371_10251098
318 Ga0157370_10018734
319 Ga0157370_10066375
320 Ga0157370_10105905
321 Ga0157370_10351455
322 Ga0157369_10001799
323 Ga0157374_10061449
324 Ga0157374_10076968
325 Ga0157374_10142191
326 Ga0157378_10072796
327 Ga0163162_10000052
328 Ga0163162_10004554
329 Ga0163162_10021730
330 Ga0163162_10157628
331 Ga0163162_10213814
332 Ga0163162_10282528
333 Ga0157372_10000020
334 Ga0157372_10000254
335 Ga0157372_10004038
336 Ga0157372_10015618
337 Ga0182008_10000030
338 Ga0182008_10000363
339 Ga0157376_10095846
340 Ga0182006_1000872
341 Ga0183373_1001
342 Ga0163161_10031402
343 Ga0163161_10283711
344 Ga0213872_10020332
345 Ga0209437_100143
346 Ga0207425_1000002
347 Ga0209026_1000663
348 Ga0209026_1003795
349 Ga0209026_1009640
350 Ga0209129_1000002
351 Ga0209129_1005110
352 Ga0209233_1011941
353 Ga0209233_1016370
354 Ga0209025_1000004
355 Ga0209758_1000006
356 Ga0207647_10008662
357 Ga0207647_10063624
358 Ga0207645_10002281
359 Ga0207705_10000043
360 Ga0207695_10020448
361 Ga0207671_10002398
362 Ga0207671_10002869
363 Ga0207671_10005821
364 Ga0207644_10010204
365 Ga0207690_10000365
366 Ga0207690_10003759
367 Ga0207704_10000052
368 Ga0207689_10171808
369 Ga0207667_10037152
370 Ga0207667_10113392
371 Ga0207667_10370300
372 Ga0207712_10346183
373 Ga0207677_10091875
374 Ga0207639_10050764
375 Ga0207639_10123676
376 Ga0207639_10289479
377 Ga0207678_10097691
378 Ga0207702_10292030
379 Ga0207641_10663962
380 Ga0207648_10002788
381 Ga0207683_10010796
382 Ga0207698_10016030
383 Ga0268266_10000030
384 Ga0307517_10006168
385 Ga0307515_10008566
386 Ga0307515_10082620
387 Ga0307515_10393302
388 Ga0316183_1095896
389 Ga0316181_1158926
390 Ga0316182_1114895
391 Ga0307412_10000065
392 Ga0307414_10005403
393 Ga0307507_10000032
394 Ga0307510_10005905
395 Ga0395899_0000002
396 Ga0395899_0000459
397 Ga0395899_0012421
398 Ga0395900_0000143
399 Ga0395900_0673821
400 Ga0395898_0008044
401 Ga0395898_0245430
402 Ga0395905_0000045
403 Ga0395905_0000765
404 Ga0395901_0002501
405 Ga0395901_0035978
406 Ga0395901_0134345
407 Ga0436361_0542797
408 Ga0439448_0000810
409 Ga0466966_0003065
410 Ga0495629_0085265
411 Ga0495651_0078117
412 Ga0495650_0000594
413 Ga0495585_0000014
414 Ga0495585_0000212
415 Ga0495583_0045313
416 Ga0495583_0099162
417 Ga0495606_0000192
418 Ga0495606_0009018
419 Ga0495610_0001861
420 Ga0495616_0003380
421 Ga0495616_0004140
422 Ga0495631_0060780
423 Ga0495637_0037911
424 Ga0495644_0015940
425 Ga0495648_0004530
426 Ga0495609_0004058
427 Ga0495622_0042890
428 Ga0495633_0000021
429 Ga0495633_0024943
430 Ga0495633_0040843
431 Ga0495668_0000673
432 Ga0495668_0059027
433 Ga0495634_0112380
434 Ga0495625_0000021
435 Ga0495625_0002495
436 Ga0495625_0074156
437 Ga0495625_0226829
438 Ga0495658_0168178
439 Ga0495649_0000009
440 Ga0495649_0057462
441 Ga0495683_0064383
442 Ga0495687_001340
443 Ga0495685_032204
444 Ga0495686_0001816
445 Ga0495686_0020738
446 Ga0495686_0253891
447 Ga0495614_0008785
448 Ga0496116_0169325
449 Ga0496126_0140316
450 Ga0495682_0004927
451 nmdc:mga0k408_350_c1
452 nmdc:mga0k408_4120_c1
453 nmdc:mga0k408_84967_c1
454 nmdc:mga07m45_112610_c1
455 Ga0500635_0002494
456 Ga0500635_0006180
457 Ga0500647_0130469
458 Ga0500651_0000124
459 Ga0500614_008259
460 Ga0500618_000080
461 Ga0500618_016552
462 Ga0500564_022907
463 Ga0500568_0016771
464 Ga0500622_0001219
465 Ga0500624_000925
466 2586209102
467 2599479173
468 2738763464
469 2738851945
470 2739303589
471 2739590833
472 2739617006
473 2739647313
474 2776615098
475 2819546487
476 2842905887
477 2849286027
478 2852629328
479 2902052519
480 2904446647
481 2919190333
482 2928082512
483 2928148900
484 2932086302
485 2939668614
486 2946002110
487 2954019010
488 2977233786

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02899

Phage_int_SAM_1

Phage integrase, N-terminal SAM-like domain

3

85

0.99

PF00589

Phage_integrase

Phage integrase family

107

276

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
3nrw-assembly1.cif.gz_A crystal structure of the n-terminal domain of phage integrase/site-specific recombinase (tnp) from haloarcula marismortui, northeast structural genomics consortium target hmr208a 0.8516 2 108
2kd1-assembly1.cif.gz_A solution nmr structure of the integrase-like domain from bacillus cereus ordered locus bc_1272. northeast structural genomics consortium target bcr268f 0.8117 2 114
3nrw-assembly1.cif.gz_A crystal structure of the n-terminal domain of phage integrase/site-specific recombinase (tnp) from haloarcula marismortui, northeast structural genomics consortium target hmr208a 0.7842 2 108
2kob-assembly1.cif.gz_A solution nmr structure of clolep_01837 (fragment 61-160) from clostridium leptum. northeast structural genomics consortium target qlr8a 0.7779 2 109
2kj9-assembly1.cif.gz_A nmr structure of intb phage-integrase-like protein fragment 90-199 from erwinia carotova subsp. atroseptica: northeast structural genomics consortium target ewr217e 0.7314 2 111
ID Description Score Start End Superfamily
af_P0A8P6_5_99_1.10.150.130 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;Tyrosine recombinase, N-terminal domain 0.9552 2 102 1.10.150.130
af_Q2FY74_2_96_1.10.150.130 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;Tyrosine recombinase, N-terminal domain 0.9428 2 102 1.10.150.130
af_P0A8P6_5_99_1.10.150.130 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;Tyrosine recombinase, N-terminal domain 0.9165 2 102 1.10.150.130
af_Q2FY74_2_96_1.10.150.130 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;Tyrosine recombinase, N-terminal domain 0.905 2 102 1.10.150.130
af_P9WF35_2_96_1.10.150.130 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;Tyrosine recombinase, N-terminal domain 0.9035 2 104 1.10.150.130
ID Description Score Start End GO Terms
AF-A0A381I8U0-F1-model_v4 Tyrosine recombinase 0.8947 139 236 GO:0003677
GO:0006310
GO:0015074
AF-X1IKC8-F1-model_v4 Tyr recombinase domain-containing protein 0.8897 114 235 GO:0003677
GO:0006310
GO:0015074
AF-X1CT54-F1-model_v4 Tyr recombinase domain-containing protein 0.8829 118 235 GO:0003677
GO:0006310
GO:0015074
AF-A0A381I8U0-F1-model_v4 Tyrosine recombinase 0.8699 139 236 GO:0003677
GO:0006310
GO:0015074
AF-X1IKC8-F1-model_v4 Tyr recombinase domain-containing protein 0.838 114 235 GO:0003677
GO:0006310
GO:0015074

Map