F356941
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 244 | 188 | 488 | 568 |
Family's Representative Sequence
| Representative Sequence | iso_pu_bacteria|2838122688|2838127608 |
| Length | 634 |
| Sequence | VTAWCGHLSRSAAAWCGQVLGYPEELASFTIHVGLFAVAAFIFIRLVWKRRRAAAAARPDEPPRAHQMSSPLHACRGVLVGLGLITAMLNVLYLTGSFFMLEVYDRVVPSRSVPTLIGLAALVGALYSFQAFLDILRGRILVRIGEWLDRAFSARAYDVVARWPLRARGSGDGLQPVRDLDQVRSYLSGLGPTALFDLPWIPFYLAICFMFHPLLGLTASIGSVMLVSLTLLTDRLTRARTKEVTGQIAQRNALAEASRRNAEVLQAMGMRGRLAARWADVNDSYMFTQRRAADIAGGFGSASKVLRMVLQSAVLAVGGYLVIIQEATAGIIIAGAILTSRALAPVELAIAHWKSLIAARQSWKRLQQQWAQLPAEEEKTPLPPPCKTLAVEAVSVAPPGEQTAVVLEASFALNPGQGVGIVGPSASGKSSLVRAIVGVWGAARGKVRLDGAALDQWSSEALGRHIGYLPQDVELFAGTVAQNINRFEPVPDAEAMIAAANAAGVHQMVLRLPKGYDTPIGEGGAALSAGQRQRIALARALYREPFLVVLDEPNSNLDSDGDQALTQAIHGVRARGGIVIVVAHRTSALAGVDQLIVMAEGRVQAFGPKDALLAKMMQPRPAVPLKVVTEGASL |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300003215 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF | Metagenome | Endosphere |
| 2 | 3300003322 | Sugarcane root Sample L2 | Metagenome | Unclassified |
| 3 | 3300003775 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 | Metagenome | Endosphere |
| 4 | 3300003790 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 | Metagenome | Endosphere |
| 5 | 3300005288 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) | Metagenome | Rhizosphere |
| 6 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 7 | 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 9 | 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Metagenome | Rhizosphere |
| 10 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 11 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 12 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 13 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 14 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 15 | 3300005983 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 | Metagenome | Rhizosphere |
| 16 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 17 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300006058 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 | Metagenome | Rhizosphere |
| 19 | 3300006186 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 | Metagenome | Endosphere |
| 20 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 21 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 22 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 23 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 24 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 25 | 3300009765 | Root nodule microbial communities of legume samples collected from Mexico - Turtle bean Mexico pink nodule | Metagenome | Nodule |
| 26 | 3300009766 | Root nodule microbial communities of legume samples collected from Mexico - Turtle bean Mexico white nodule | Metagenome | Nodule |
| 27 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 28 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 29 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 30 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 31 | 3300015265 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG | Metagenome | Rhizosphere |
| 32 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 33 | 3300025272 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 34 | 3300025273 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 35 | 3300025294 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 36 | 3300025295 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 37 | 3300025297 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) | Metagenome | Endosphere |
| 38 | 3300025299 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 39 | 3300025302 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 40 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 41 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 49 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 52 | 3300031616 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM | Metagenome | Unclassified |
| 53 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 54 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 55 | 3300041405 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 | Metagenome | Rhizosphere |
| 56 | 3300041407 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 | Metagenome | Rhizosphere |
| 57 | 3300041411 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 | Metagenome | Rhizosphere |
| 58 | 3300041413 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 | Metagenome | Rhizosphere |
| 59 | 3300041492 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_2 MetaG | Metagenome | Unclassified |
| 60 | 3300041498 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG | Metagenome | Unclassified |
| 61 | 3300041501 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_7 MetaG | Metagenome | Unclassified |
| 62 | 3300041503 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_8 MetaG | Metagenome | Unclassified |
| 63 | 3300041507 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_10 MetaG | Metagenome | Unclassified |
| 64 | 3300041512 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG | Metagenome | Unclassified |
| 65 | 3300042006 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 | Metagenome | Rhizosphere |
| 66 | 3300042009 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z071817_5348 | Metagenome | Rhizosphere |
| 67 | 3300042010 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 | Metagenome | Rhizosphere |
| 68 | 3300046452 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere | Metagenome | Rhizosphere |
| 69 | 3300046458 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere | Metagenome | Rhizosphere |
| 70 | 3300046460 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere | Metagenome | Rhizosphere |
| 71 | 3300046474 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere | Metagenome | Rhizosphere |
| 72 | 3300046491 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere | Metagenome | Rhizosphere |
| 73 | 3300046492 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere | Metagenome | Rhizosphere |
| 74 | 3300046501 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere | Metagenome | Rhizosphere |
| 75 | 3300046506 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere | Metagenome | Rhizosphere |
| 76 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 77 | 3300046512 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere | Metagenome | Rhizosphere |
| 78 | 3300046513 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere | Metagenome | Rhizosphere |
| 79 | 3300046515 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere | Metagenome | Rhizosphere |
| 80 | 3300046518 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere | Metagenome | Rhizosphere |
| 81 | 3300046519 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere | Metagenome | Rhizosphere |
| 82 | 3300046520 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere | Metagenome | Rhizosphere |
| 83 | 3300046522 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere | Metagenome | Rhizosphere |
| 84 | 3300046524 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere | Metagenome | Rhizosphere |
| 85 | 3300046530 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere | Metagenome | Rhizosphere |
| 86 | 3300046542 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere | Metagenome | Rhizosphere |
| 87 | 3300046557 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere | Metagenome | Rhizosphere |
| 88 | 3300046558 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere | Metagenome | Rhizosphere |
| 89 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 90 | 3300046648 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere | Metagenome | Rhizosphere |
| 91 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 92 | 3300046665 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere | Metagenome | Rhizosphere |
| 93 | 3300046674 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere | Metagenome | Rhizosphere |
| 94 | 3300046691 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere | Metagenome | Rhizosphere |
| 95 | 3300046694 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere | Metagenome | Rhizosphere |
| 96 | 3300046794 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300046810 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300047318 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300047320 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300047323 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300047443 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300047469 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300047470 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300048091 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 107 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 108 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 109 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 110 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 111 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 112 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 113 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 114 | 3300049459 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere | Metagenome | Rhizosphere |
| 115 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 116 | 3300050516 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation | Metagenome | Endosphere |
| 117 | 3300053086 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere | Metagenome | Endosphere |
| 118 | 3300053096 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere | Metagenome | Endosphere |
| 119 | 3300053105 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 endosphere | Metagenome | Endosphere |
| 120 | 3300053122 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere | Metagenome | Endosphere |
| 121 | 3300053125 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere | Metagenome | Endosphere |
| 122 | 3300053136 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere | Metagenome | Endosphere |
| 123 | 3300053139 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere | Metagenome | Endosphere |
| 124 | 3300053140 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere | Metagenome | Endosphere |
| 125 | 3300053141 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 endosphere | Metagenome | Endosphere |
| 126 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 127 | 3300053156 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere | Metagenome | Endosphere |
| 128 | 3300053162 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 endosphere | Metagenome | Endosphere |
| 129 | 3300053177 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere | Metagenome | Endosphere |
| 130 | 2838122688 | Bradyrhizobium sp. CIR3A | Isolate | Nodule |
| 131 | 2510917022 | Rhizobium sp. AP16 | Isolate | Rhizosphere |
| 132 | 2510917030 | Rhizobium sp. CF142 | Isolate | Rhizosphere |
| 133 | 2513237084 | Rhizobium leguminosarum bv. viciae UPM1131 | Isolate | Nodule |
| 134 | 2513237144 | Rhizobium sullae WSM1592 | Isolate | Nodule |
| 135 | 2513237146 | Rhizobium mongolense USDA 1844 (Illumina) | Isolate | Nodule |
| 136 | 2515075009 | Rhizobium leguminosarum bv. viciae 248 | Isolate | Nodule |
| 137 | 2515154116 | Rhizobium ruizarguesonis Ps8 | Isolate | Nodule |
| 138 | 2517093001 | Bradyrhizobium japonicum USDA 124 | Isolate | Nodule |
| 139 | 2519899620 | Rhizobium sp. Pop5 | Isolate | Nodule |
| 140 | 2523231067 | Pleomorphomonas oryzae DSM 16300 | Isolate | Unclassified |
| 141 | 2582581298 | Rhizobium alamii YR540 | Isolate | Rhizosphere |
| 142 | 2582581299 | Rhizobium leguminosarum OV483 | Isolate | Rhizosphere |
| 143 | 2582581316 | Agrobacterium rhizogenes OK036 | Isolate | Rhizosphere |
| 144 | 2585427527 | Rhizobium lusitanum YR374 | Isolate | Rhizosphere |
| 145 | 2585427529 | Rhizobium alamii YR584 | Isolate | Rhizosphere |
| 146 | 2585427531 | Agrobacterium rhizogenes YR530 | Isolate | Rhizosphere |
| 147 | 2585427609 | Agrobacterium rhizogenes CF263 | Isolate | Rhizosphere |
| 148 | 2585428125 | Agrobacterium rhizogenes CF262 | Isolate | Rhizosphere |
| 149 | 2599185170 | Rhizobium mongolense USDA 1844 (PacBio) | Isolate | Nodule |
| 150 | 2643221634 | Rhizobium sp. Root1203 | Isolate | Unclassified |
| 151 | 2643221643 | Rhizobium sp. Root1220 | Isolate | Unclassified |
| 152 | 2775506901 | Microvirga ossetica V5/3m | Isolate | Unclassified |
| 153 | 2775507049 | Rhizobium sp. ACO-34A | Isolate | Unclassified |
| 154 | 2791355261 | Rhizobium sp. J15 | Isolate | Nodule |
| 155 | 2791355266 | Rhizobium sp. L43 | Isolate | Nodule |
| 156 | 2821123053 | Rhizobium cellulosilyticum 1193 | Isolate | Unclassified |
| 157 | 2838035591 | Rhizobium mongolense SEMIA 4087 | Isolate | Nodule |
| 158 | 2838048938 | Rhizobium pisi 27/80 | Isolate | Nodule |
| 159 | 2838661181 | Rhizobium mongolense SEMIA 402 | Isolate | Nodule |
| 160 | 2838680041 | Rhizobium leguminosarum SEMIA 415 | Isolate | Nodule |
| 161 | 2838694306 | Rhizobium leguminosarum SEMIA 421 | Isolate | Nodule |
| 162 | 2838707686 | Rhizobium leguminosarum SEMIA 430 | Isolate | Nodule |
| 163 | 2841941048 | Bradyrhizobium sp. SBR1B | Isolate | Nodule |
| 164 | 2841949485 | Bradyrhizobium sp. ERR14 | Isolate | Nodule |
| 165 | 2841966195 | Bradyrhizobium sp. CIR18 | Isolate | Nodule |
| 166 | 2841974524 | Bradyrhizobium sp. CIR48 | Isolate | Nodule |
| 167 | 2841983080 | Bradyrhizobium sp. IAR9 | Isolate | Nodule |
| 168 | 2842077413 | Rhizobium leguminosarum SEMIA 422 | Isolate | Nodule |
| 169 | 2842118031 | Rhizobium esperanzae SEMIA 420 | Isolate | Nodule |
| 170 | 2842237096 | Rhizobium leguminosarum SEMIA 482 | Isolate | Nodule |
| 171 | 2842291075 | Rhizobium leguminosarum SEMIA 491 | Isolate | Nodule |
| 172 | 2842370503 | Rhizobium leguminosarum SEMIA 4022 | Isolate | Nodule |
| 173 | 2842377471 | Rhizobium leguminosarum SEMIA 4024 | Isolate | Nodule |
| 174 | 2842384541 | Rhizobium leguminosarum SEMIA 4025 | Isolate | Nodule |
| 175 | 2842395702 | Rhizobium ecuadorense SEMIA 4029 | Isolate | Nodule |
| 176 | 2857509624 | Bradyrhizobium sp. R-73088 | Isolate | Unclassified |
| 177 | 2857531043 | Neorhizobium sp. R-72160 | Isolate | Unclassified |
| 178 | 2881364244 | Bradyrhizobium sp. RP6 | Isolate | Unclassified |
| 179 | 2895511927 | Pseudoxanthomonas sp. SGD-5-1 | Isolate | Rhizosphere |
| 180 | 2919166419 | Agrobacterium cavarae 2074 | Isolate | Unclassified |
| 181 | 2933016740 | Rhizobium sp. SEMIA 4085 | Isolate | Nodule |
| 182 | 2935894831 | Rhizobium leguminosarum SEMIA 419 | Isolate | Nodule |
| 183 | 3005409236 | Rhizobium sp. P32RR-XVIII | Isolate | Rhizosphere |
| 184 | 8005460587 | Rhizobium leguminosarum bv. viciae 248 | Isolate | Nodule |
| 185 | 8005695170 | Rhizobium sp. RMa-01 | Isolate | Unclassified |
| 186 | 8024486573 | Rhizobium tubonense CCBAU 85046 | Isolate | Nodule |
| 187 | 8056125926 | Pseudomonas azerbaijanorientalis SWRI123 | Isolate | Rhizosphere |
| 188 | 8056875544 | Rhizobium halophilum TRM95001 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 72.54 |
| Metatranscriptomes | 0 |
| Isolates | 27.46 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 13.93 |
| Nodule | 16.8 |
| Rhizoplane | 0.41 |
| Rhizosphere | 54.1 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI25153J46596_10006670 | 3300003215 | Bacteria | 5807 |
| 2 | rootL2_10015599 | 3300003322 | Bacteria | 13600 |
| 3 | Ga0055524_1001708 | 3300003775 | Bacteria | 12205 |
| 4 | Ga0055524_1009613 | 3300003775 | Bacteria | 3913 |
| 5 | Ga0055528_1001816 | 3300003790 | Bacteria | 12205 |
| 6 | Ga0065714_10003634 | 3300005288 | Bacteria | 8786 |
| 7 | Ga0070667_100002673 | 3300005367 | Bacteria | 15435 |
| 8 | Ga0070708_100031361 | 3300005445 | Bacteria | 4599 |
| 9 | Ga0070698_100036312 | 3300005471 | Bacteria | 5091 |
| 10 | Ga0070697_100012084 | 3300005536 | Bacteria | 6760 |
| 11 | Ga0068864_100014181 | 3300005618 | Bacteria | 6615 |
| 12 | Ga0068863_100000052 | 3300005841 | Bacteria | 125430 |
| 13 | Ga0068858_100000935 | 3300005842 | Bacteria | 30230 |
| 14 | Ga0068858_100007332 | 3300005842 | Bacteria | 10673 |
| 15 | Ga0068860_100000007 | 3300005843 | Bacteria | 429329 |
| 16 | Ga0068862_100005670 | 3300005844 | Bacteria | 10423 |
| 17 | Ga0081540_1006788 | 3300005983 | Bacteria | 8272 |
| 18 | Ga0081539_10004404 | 3300005985 | Bacteria | 15600 |
| 19 | Ga0070717_10014658 | 3300006028 | Bacteria | 6032 |
| 20 | Ga0075432_10002898 | 3300006058 | Bacteria | 5767 |
| 21 | Ga0075369_10000941 | 3300006186 | Bacteria | 9682 |
| 22 | Ga0105240_10000976 | 3300009093 | Bacteria | 50953 |
| 23 | Ga0105245_10000277 | 3300009098 | Bacteria | 48499 |
| 24 | Ga0114129_10084634 | 3300009147 | Bacteria | 4402 |
| 25 | Ga0105243_10016222 | 3300009148 | Bacteria | 5636 |
| 26 | Ga0105238_10072643 | 3300009551 | Bacteria | 3435 |
| 27 | Ga0123341_1000219 | 3300009765 | Bacteria | 29972 |
| 28 | Ga0123342_1005154 | 3300009766 | Bacteria | 19253 |
| 29 | Ga0105239_10018017 | 3300010375 | Bacteria | 7812 |
| 30 | Ga0157371_10071856 | 3300013102 | Bacteria | 2450 |
| 31 | Ga0157374_10040466 | 3300013296 | Bacteria | 4293 |
| 32 | Ga0163163_10189868 | 3300014325 | Bacteria | 2103 |
| 33 | Ga0182005_1019749 | 3300015265 | Bacteria | 1856 |
| 34 | Ga0163161_10051928 | 3300017792 | Bacteria | 2971 |
| 35 | Ga0209455_1005845 | 3300025272 | Bacteria | 3725 |
| 36 | Ga0209673_1000567 | 3300025273 | Bacteria | 59050 |
| 37 | Ga0209673_1001105 | 3300025273 | Bacteria | 30170 |
| 38 | Ga0209025_1004408 | 3300025294 | Bacteria | 12246 |
| 39 | Ga0209564_1000592 | 3300025295 | Bacteria | 57093 |
| 40 | Ga0209758_1000374 | 3300025297 | Bacteria | 78052 |
| 41 | Ga0209256_1001796 | 3300025299 | Bacteria | 20243 |
| 42 | Ga0209256_1003082 | 3300025299 | Bacteria | 12236 |
| 43 | Ga0207426_1000354 | 3300025302 | Bacteria | 83734 |
| 44 | Ga0207684_10003003 | 3300025910 | Bacteria | 16721 |
| 45 | Ga0207695_10000948 | 3300025913 | Bacteria | 51627 |
| 46 | Ga0207694_10044586 | 3300025924 | Bacteria | 3424 |
| 47 | Ga0207687_10000271 | 3300025927 | Bacteria | 35431 |
| 48 | Ga0207658_10009434 | 3300025986 | Bacteria | 6618 |
| 49 | Ga0207703_10000751 | 3300026035 | Bacteria | 32040 |
| 50 | Ga0207703_10006231 | 3300026035 | Bacteria | 9548 |
| 51 | Ga0207641_10000042 | 3300026088 | Bacteria | 186384 |
| 52 | Ga0207676_10007005 | 3300026095 | Bacteria | 7989 |
| 53 | Ga0207428_10000782 | 3300027907 | Bacteria | 36072 |
| 54 | Ga0207428_10007336 | 3300027907 | Bacteria | 10064 |
| 55 | Ga0268265_10010057 | 3300028380 | Bacteria | 6387 |
| 56 | Ga0268264_10000134 | 3300028381 | Bacteria | 179475 |
| 57 | Ga0265327_10000500 | 3300031251 | Bacteria | 68037 |
| 58 | Ga0307508_10005073 | 3300031616 | Bacteria | 12639 |
| 59 | Ga0307406_10026443 | 3300031901 | Bacteria | 3485 |
| 60 | Ga0307415_100022940 | 3300032126 | Bacteria | 3864 |
| 61 | Ga0439438_008092 | 3300041405 | Bacteria | 3529 |
| 62 | Ga0439447_011575 | 3300041407 | Bacteria | 2568 |
| 63 | Ga0439466_0000535 | 3300041411 | Bacteria | 14372 |
| 64 | Ga0439465_0012832 | 3300041413 | Bacteria | 2621 |
| 65 | Ga0451835_0634759 | 3300041492 | Bacteria | 6029 |
| 66 | Ga0451841_1097982 | 3300041498 | Bacteria | 4268 |
| 67 | Ga0451845_0728726 | 3300041501 | Bacteria | 17951 |
| 68 | Ga0451847_0291690 | 3300041503 | Bacteria | 2011 |
| 69 | Ga0451851_1018981 | 3300041507 | Bacteria | 4317 |
| 70 | Ga0451853_0375546 | 3300041512 | Bacteria | 5577 |
| 71 | Ga0439432_002325 | 3300042006 | Bacteria | 7168 |
| 72 | Ga0439451_000358 | 3300042009 | Bacteria | 8843 |
| 73 | Ga0439452_003593 | 3300042010 | Bacteria | 5404 |
| 74 | Ga0495617_000126 | 3300046452 | Bacteria | 50425 |
| 75 | Ga0495617_000156 | 3300046452 | Bacteria | 43507 |
| 76 | Ga0495617_018581 | 3300046452 | Bacteria | 2351 |
| 77 | Ga0495591_000889 | 3300046458 | Bacteria | 20922 |
| 78 | Ga0495591_001128 | 3300046458 | Bacteria | 17624 |
| 79 | Ga0495638_0002794 | 3300046460 | Bacteria | 14005 |
| 80 | Ga0495638_0033185 | 3300046460 | Bacteria | 3302 |
| 81 | Ga0495638_0080783 | 3300046460 | Bacteria | 1974 |
| 82 | Ga0495605_0029290 | 3300046474 | Bacteria | 2836 |
| 83 | Ga0495584_0000373 | 3300046491 | Bacteria | 30942 |
| 84 | Ga0495585_0006799 | 3300046492 | Bacteria | 7059 |
| 85 | Ga0495607_0054262 | 3300046501 | Bacteria | 2310 |
| 86 | Ga0495583_0000804 | 3300046506 | Bacteria | 38732 |
| 87 | Ga0495583_0000994 | 3300046506 | Bacteria | 32419 |
| 88 | Ga0495583_0001175 | 3300046506 | Bacteria | 28264 |
| 89 | Ga0495583_0015182 | 3300046506 | Bacteria | 4203 |
| 90 | Ga0495606_0005572 | 3300046507 | Bacteria | 11999 |
| 91 | Ga0495610_0000828 | 3300046512 | Bacteria | 28914 |
| 92 | Ga0495610_0000915 | 3300046512 | Bacteria | 27419 |
| 93 | Ga0495610_0003092 | 3300046512 | Bacteria | 13284 |
| 94 | Ga0495610_0019430 | 3300046512 | Bacteria | 3801 |
| 95 | Ga0495616_0004646 | 3300046513 | Bacteria | 8621 |
| 96 | Ga0495616_0044962 | 3300046513 | Bacteria | 2238 |
| 97 | Ga0495620_0000457 | 3300046515 | Bacteria | 26955 |
| 98 | Ga0495631_0001820 | 3300046518 | Bacteria | 12598 |
| 99 | Ga0495632_0013011 | 3300046519 | Bacteria | 4768 |
| 100 | Ga0495637_0000435 | 3300046520 | Bacteria | 30470 |
| 101 | Ga0495643_0001926 | 3300046522 | Bacteria | 17487 |
| 102 | Ga0495643_0010210 | 3300046522 | Bacteria | 5785 |
| 103 | Ga0495648_0000644 | 3300046524 | Bacteria | 37213 |
| 104 | Ga0495648_0003733 | 3300046524 | Bacteria | 13281 |
| 105 | Ga0495654_0000411 | 3300046530 | Bacteria | 36517 |
| 106 | Ga0495654_0013033 | 3300046530 | Bacteria | 4453 |
| 107 | Ga0495597_0036926 | 3300046542 | Bacteria | 2197 |
| 108 | Ga0495622_0002509 | 3300046557 | Bacteria | 8874 |
| 109 | Ga0495622_0045689 | 3300046557 | Bacteria | 2035 |
| 110 | Ga0495633_0013385 | 3300046558 | Bacteria | 4327 |
| 111 | Ga0495668_0032598 | 3300046616 | Bacteria | 2930 |
| 112 | Ga0495668_0055418 | 3300046616 | Bacteria | 2189 |
| 113 | Ga0495611_0002978 | 3300046648 | Bacteria | 7553 |
| 114 | Ga0495611_0012323 | 3300046648 | Bacteria | 3636 |
| 115 | Ga0495625_0003830 | 3300046660 | Bacteria | 14555 |
| 116 | Ga0495661_0017846 | 3300046665 | Bacteria | 4677 |
| 117 | Ga0495588_0004361 | 3300046674 | Bacteria | 6248 |
| 118 | Ga0495588_0034577 | 3300046674 | Bacteria | 2558 |
| 119 | Ga0495670_0022813 | 3300046691 | Bacteria | 3091 |
| 120 | Ga0495649_0002467 | 3300046694 | Bacteria | 12996 |
| 121 | Ga0495649_0018957 | 3300046694 | Bacteria | 3865 |
| 122 | Ga0495649_0076210 | 3300046694 | Bacteria | 1795 |
| 123 | Ga0495589_0000360 | 3300046794 | Bacteria | 35369 |
| 124 | Ga0495660_0010324 | 3300046810 | Bacteria | 5430 |
| 125 | Ga0495636_0000309 | 3300047318 | Bacteria | 18989 |
| 126 | Ga0495672_0004690 | 3300047320 | Bacteria | 11063 |
| 127 | Ga0495672_0018344 | 3300047320 | Bacteria | 4649 |
| 128 | Ga0495672_0023226 | 3300047320 | Bacteria | 4018 |
| 129 | Ga0495672_0028785 | 3300047320 | Bacteria | 3508 |
| 130 | Ga0495683_0000367 | 3300047323 | Bacteria | 37129 |
| 131 | Ga0495687_029272 | 3300047443 | Bacteria | 2552 |
| 132 | Ga0495673_0003749 | 3300047469 | Bacteria | 9865 |
| 133 | Ga0495681_0002813 | 3300047470 | Bacteria | 12309 |
| 134 | Ga0495686_0002714 | 3300047472 | Bacteria | 16201 |
| 135 | Ga0495686_0004283 | 3300047472 | Bacteria | 11823 |
| 136 | Ga0495626_0000524 | 3300048091 | Bacteria | 38319 |
| 137 | Ga0495626_0000561 | 3300048091 | Bacteria | 36868 |
| 138 | Ga0496105_0000436 | 3300048908 | Bacteria | 27341 |
| 139 | Ga0496116_0001265 | 3300048919 | Bacteria | 29157 |
| 140 | Ga0496116_0052838 | 3300048919 | Bacteria | 2688 |
| 141 | Ga0496116_0060328 | 3300048919 | Bacteria | 2461 |
| 142 | Ga0496121_0002117 | 3300048924 | Bacteria | 31186 |
| 143 | Ga0496121_0018121 | 3300048924 | Bacteria | 7123 |
| 144 | Ga0496121_0024898 | 3300048924 | Bacteria | 5705 |
| 145 | Ga0496122_0008851 | 3300048925 | Bacteria | 10741 |
| 146 | Ga0496122_0030200 | 3300048925 | Bacteria | 4550 |
| 147 | Ga0496122_0075303 | 3300048925 | Bacteria | 2382 |
| 148 | Ga0496123_0016702 | 3300048926 | Bacteria | 5942 |
| 149 | Ga0496123_0023453 | 3300048926 | Bacteria | 4722 |
| 150 | Ga0496124_0006938 | 3300048927 | Bacteria | 12171 |
| 151 | Ga0496124_0030132 | 3300048927 | Bacteria | 4821 |
| 152 | Ga0496124_0152678 | 3300048927 | Bacteria | 1809 |
| 153 | Ga0496125_0017983 | 3300048928 | Bacteria | 6718 |
| 154 | Ga0496126_0000343 | 3300048929 | Bacteria | 97986 |
| 155 | Ga0495678_000778 | 3300049459 | Bacteria | 28590 |
| 156 | Ga0495678_006620 | 3300049459 | Bacteria | 6139 |
| 157 | nmdc:mga05p37_70790_c1 | 3300050507 | Bacteria | 4290 |
| 158 | nmdc:mga0sz30_12299_c1 | 3300050516 | Bacteria | 3328 |
| 159 | Ga0500578_0003002 | 3300053086 | Bacteria | 13086 |
| 160 | Ga0500641_0001600 | 3300053096 | Bacteria | 8064 |
| 161 | Ga0500557_000543 | 3300053105 | Bacteria | 5082 |
| 162 | Ga0500608_000645 | 3300053122 | Bacteria | 12826 |
| 163 | Ga0500618_002671 | 3300053125 | Bacteria | 6541 |
| 164 | Ga0500559_0035903 | 3300053136 | Bacteria | 2142 |
| 165 | Ga0500568_0000355 | 3300053139 | Bacteria | 35644 |
| 166 | Ga0500568_0000781 | 3300053139 | Bacteria | 22428 |
| 167 | Ga0500573_0000040 | 3300053140 | Bacteria | 105074 |
| 168 | Ga0500574_000019 | 3300053141 | Bacteria | 32310 |
| 169 | Ga0500616_0001467 | 3300053153 | Bacteria | 22484 |
| 170 | Ga0500616_0001797 | 3300053153 | Bacteria | 19538 |
| 171 | Ga0500616_0002397 | 3300053153 | Bacteria | 15641 |
| 172 | Ga0500622_0000083 | 3300053156 | Bacteria | 101289 |
| 173 | Ga0500622_0000278 | 3300053156 | Bacteria | 52272 |
| 174 | Ga0500638_000458 | 3300053162 | Bacteria | 9879 |
| 175 | Ga0500636_0000119 | 3300053177 | Bacteria | 41322 |
| 176 | Ga0500636_0000790 | 3300053177 | Bacteria | 17038 |
| 177 | Ga0500636_0001389 | 3300053177 | Bacteria | 13155 |
| 178 | 2838127608 | 2838122688 | Bacteria | 8803140 |
| 179 | 2511133165 | 2510917022 | Bacteria | 6504556 |
| 180 | 2511198632 | 2510917030 | Bacteria | 7460662 |
| 181 | 2513574041 | 2513237084 | Bacteria | 7231967 |
| 182 | 2513910070 | 2513237144 | Bacteria | 7530820 |
| 183 | 2513928801 | 2513237146 | Bacteria | 7166346 |
| 184 | 2513930679 | 2513237146 | Bacteria | 7166346 |
| 185 | 2515109907 | 2515075009 | Bacteria | 7288508 |
| 186 | 2515109911 | 2515075009 | Bacteria | 7288508 |
| 187 | 2515661776 | 2515154116 | Bacteria | 7552979 |
| 188 | 2517107659 | 2517093001 | Bacteria | 9002274 |
| 189 | 2520380297 | 2519899620 | Bacteria | 6499161 |
| 190 | 2523469858 | 2523231067 | Bacteria | 5230452 |
| 191 | 2585220573 | 2582581298 | Bacteria | 7315509 |
| 192 | 2585221424 | 2582581298 | Bacteria | 7315509 |
| 193 | 2585232177 | 2582581299 | Bacteria | 6518058 |
| 194 | 2585332391 | 2582581316 | Bacteria | 7774528 |
| 195 | 2585536836 | 2585427527 | Bacteria | 7273426 |
| 196 | 2585544406 | 2585427529 | Bacteria | 7395659 |
| 197 | 2585548376 | 2585427529 | Bacteria | 7395659 |
| 198 | 2585563732 | 2585427531 | Bacteria | 6992870 |
| 199 | 2585907070 | 2585427609 | Bacteria | 6667127 |
| 200 | 2587982936 | 2585428125 | Bacteria | 6662905 |
| 201 | 2599413875 | 2599185170 | Bacteria | 7295545 |
| 202 | 2599414988 | 2599185170 | Bacteria | 7295545 |
| 203 | 2644196130 | 2643221634 | Bacteria | 6705461 |
| 204 | 2644196207 | 2643221634 | Bacteria | 6705461 |
| 205 | 2644240893 | 2643221643 | Bacteria | 5749658 |
| 206 | 2776258148 | 2775506901 | Bacteria | 9631051 |
| 207 | 2776911511 | 2775507049 | Bacteria | 6284736 |
| 208 | 2793331549 | 2791355261 | Bacteria | 6661293 |
| 209 | 2793364483 | 2791355266 | Bacteria | 7116587 |
| 210 | 2821130399 | 2821123053 | Bacteria | 7836056 |
| 211 | 2838039285 | 2838035591 | Bacteria | 7166484 |
| 212 | 2838042881 | 2838035591 | Bacteria | 7166484 |
| 213 | 2838049482 | 2838048938 | Bacteria | 6044578 |
| 214 | 2838668227 | 2838661181 | Bacteria | 7385261 |
| 215 | 2838682375 | 2838680041 | Bacteria | 6545511 |
| 216 | 2838696946 | 2838694306 | Bacteria | 6853137 |
| 217 | 2838709813 | 2838707686 | Bacteria | 6619912 |
| 218 | 2841941446 | 2841941048 | Bacteria | 8688029 |
| 219 | 2841952543 | 2841949485 | Bacteria | 8680857 |
| 220 | 2841967581 | 2841966195 | Bacteria | 8673214 |
| 221 | 2841979023 | 2841974524 | Bacteria | 8931498 |
| 222 | 2841986568 | 2841983080 | Bacteria | 8395090 |
| 223 | 2842077987 | 2842077413 | Bacteria | 6508645 |
| 224 | 2842119505 | 2842118031 | Bacteria | 7033875 |
| 225 | 2842239226 | 2842237096 | Bacteria | 6620661 |
| 226 | 2842291650 | 2842291075 | Bacteria | 7076806 |
| 227 | 2842372941 | 2842370503 | Bacteria | 7038661 |
| 228 | 2842378046 | 2842377471 | Bacteria | 7140707 |
| 229 | 2842386013 | 2842384541 | Bacteria | 7057858 |
| 230 | 2842398535 | 2842395702 | Bacteria | 6780583 |
| 231 | 2857515289 | 2857509624 | Bacteria | 7472071 |
| 232 | 2857537084 | 2857531043 | Bacteria | 6754041 |
| 233 | 2881364878 | 2881364244 | Bacteria | 7710352 |
| 234 | 2895518918 | 2895511927 | Bacteria | 6802080 |
| 235 | 2919171114 | 2919166419 | Bacteria | 4952238 |
| 236 | 2933022788 | 2933016740 | Bacteria | 6355406 |
| 237 | 2935899187 | 2935894831 | Bacteria | 6620579 |
| 238 | 3005413670 | 3005409236 | Bacteria | 7188837 |
| 239 | 8005465941 | 8005460587 | Bacteria | 7157962 |
| 240 | 8005465945 | 8005460587 | Bacteria | 7157962 |
| 241 | 8005700841 | 8005695170 | Bacteria | 6912330 |
| 242 | 8024493093 | 8024486573 | Bacteria | 6540512 |
| 243 | 8056127539 | 8056125926 | Bacteria | 6228218 |
| 244 | 8056876675 | 8056875544 | Bacteria | 4355797 |
| 245 | JGI25153J46596_10006670 | |||
| 246 | rootL2_10015599 | |||
| 247 | Ga0055524_1001708 | |||
| 248 | Ga0055524_1009613 | |||
| 249 | Ga0055528_1001816 | |||
| 250 | Ga0065714_10003634 | |||
| 251 | Ga0070667_100002673 | |||
| 252 | Ga0070708_100031361 | |||
| 253 | Ga0070698_100036312 | |||
| 254 | Ga0070697_100012084 | |||
| 255 | Ga0068864_100014181 | |||
| 256 | Ga0068863_100000052 | |||
| 257 | Ga0068858_100000935 | |||
| 258 | Ga0068858_100007332 | |||
| 259 | Ga0068860_100000007 | |||
| 260 | Ga0068862_100005670 | |||
| 261 | Ga0081540_1006788 | |||
| 262 | Ga0081539_10004404 | |||
| 263 | Ga0070717_10014658 | |||
| 264 | Ga0075432_10002898 | |||
| 265 | Ga0075369_10000941 | |||
| 266 | Ga0105240_10000976 | |||
| 267 | Ga0105245_10000277 | |||
| 268 | Ga0114129_10084634 | |||
| 269 | Ga0105243_10016222 | |||
| 270 | Ga0105238_10072643 | |||
| 271 | Ga0123341_1000219 | |||
| 272 | Ga0123342_1005154 | |||
| 273 | Ga0105239_10018017 | |||
| 274 | Ga0157371_10071856 | |||
| 275 | Ga0157374_10040466 | |||
| 276 | Ga0163163_10189868 | |||
| 277 | Ga0182005_1019749 | |||
| 278 | Ga0163161_10051928 | |||
| 279 | Ga0209455_1005845 | |||
| 280 | Ga0209673_1000567 | |||
| 281 | Ga0209673_1001105 | |||
| 282 | Ga0209025_1004408 | |||
| 283 | Ga0209564_1000592 | |||
| 284 | Ga0209758_1000374 | |||
| 285 | Ga0209256_1001796 | |||
| 286 | Ga0209256_1003082 | |||
| 287 | Ga0207426_1000354 | |||
| 288 | Ga0207684_10003003 | |||
| 289 | Ga0207695_10000948 | |||
| 290 | Ga0207694_10044586 | |||
| 291 | Ga0207687_10000271 | |||
| 292 | Ga0207658_10009434 | |||
| 293 | Ga0207703_10000751 | |||
| 294 | Ga0207703_10006231 | |||
| 295 | Ga0207641_10000042 | |||
| 296 | Ga0207676_10007005 | |||
| 297 | Ga0207428_10000782 | |||
| 298 | Ga0207428_10007336 | |||
| 299 | Ga0268265_10010057 | |||
| 300 | Ga0268264_10000134 | |||
| 301 | Ga0265327_10000500 | |||
| 302 | Ga0307508_10005073 | |||
| 303 | Ga0307406_10026443 | |||
| 304 | Ga0307415_100022940 | |||
| 305 | Ga0439438_008092 | |||
| 306 | Ga0439447_011575 | |||
| 307 | Ga0439466_0000535 | |||
| 308 | Ga0439465_0012832 | |||
| 309 | Ga0451835_0634759 | |||
| 310 | Ga0451841_1097982 | |||
| 311 | Ga0451845_0728726 | |||
| 312 | Ga0451847_0291690 | |||
| 313 | Ga0451851_1018981 | |||
| 314 | Ga0451853_0375546 | |||
| 315 | Ga0439432_002325 | |||
| 316 | Ga0439451_000358 | |||
| 317 | Ga0439452_003593 | |||
| 318 | Ga0495617_000126 | |||
| 319 | Ga0495617_000156 | |||
| 320 | Ga0495617_018581 | |||
| 321 | Ga0495591_000889 | |||
| 322 | Ga0495591_001128 | |||
| 323 | Ga0495638_0002794 | |||
| 324 | Ga0495638_0033185 | |||
| 325 | Ga0495638_0080783 | |||
| 326 | Ga0495605_0029290 | |||
| 327 | Ga0495584_0000373 | |||
| 328 | Ga0495585_0006799 | |||
| 329 | Ga0495607_0054262 | |||
| 330 | Ga0495583_0000804 | |||
| 331 | Ga0495583_0000994 | |||
| 332 | Ga0495583_0001175 | |||
| 333 | Ga0495583_0015182 | |||
| 334 | Ga0495606_0005572 | |||
| 335 | Ga0495610_0000828 | |||
| 336 | Ga0495610_0000915 | |||
| 337 | Ga0495610_0003092 | |||
| 338 | Ga0495610_0019430 | |||
| 339 | Ga0495616_0004646 | |||
| 340 | Ga0495616_0044962 | |||
| 341 | Ga0495620_0000457 | |||
| 342 | Ga0495631_0001820 | |||
| 343 | Ga0495632_0013011 | |||
| 344 | Ga0495637_0000435 | |||
| 345 | Ga0495643_0001926 | |||
| 346 | Ga0495643_0010210 | |||
| 347 | Ga0495648_0000644 | |||
| 348 | Ga0495648_0003733 | |||
| 349 | Ga0495654_0000411 | |||
| 350 | Ga0495654_0013033 | |||
| 351 | Ga0495597_0036926 | |||
| 352 | Ga0495622_0002509 | |||
| 353 | Ga0495622_0045689 | |||
| 354 | Ga0495633_0013385 | |||
| 355 | Ga0495668_0032598 | |||
| 356 | Ga0495668_0055418 | |||
| 357 | Ga0495611_0002978 | |||
| 358 | Ga0495611_0012323 | |||
| 359 | Ga0495625_0003830 | |||
| 360 | Ga0495661_0017846 | |||
| 361 | Ga0495588_0004361 | |||
| 362 | Ga0495588_0034577 | |||
| 363 | Ga0495670_0022813 | |||
| 364 | Ga0495649_0002467 | |||
| 365 | Ga0495649_0018957 | |||
| 366 | Ga0495649_0076210 | |||
| 367 | Ga0495589_0000360 | |||
| 368 | Ga0495660_0010324 | |||
| 369 | Ga0495636_0000309 | |||
| 370 | Ga0495672_0004690 | |||
| 371 | Ga0495672_0018344 | |||
| 372 | Ga0495672_0023226 | |||
| 373 | Ga0495672_0028785 | |||
| 374 | Ga0495683_0000367 | |||
| 375 | Ga0495687_029272 | |||
| 376 | Ga0495673_0003749 | |||
| 377 | Ga0495681_0002813 | |||
| 378 | Ga0495686_0002714 | |||
| 379 | Ga0495686_0004283 | |||
| 380 | Ga0495626_0000524 | |||
| 381 | Ga0495626_0000561 | |||
| 382 | Ga0496105_0000436 | |||
| 383 | Ga0496116_0001265 | |||
| 384 | Ga0496116_0052838 | |||
| 385 | Ga0496116_0060328 | |||
| 386 | Ga0496121_0002117 | |||
| 387 | Ga0496121_0018121 | |||
| 388 | Ga0496121_0024898 | |||
| 389 | Ga0496122_0008851 | |||
| 390 | Ga0496122_0030200 | |||
| 391 | Ga0496122_0075303 | |||
| 392 | Ga0496123_0016702 | |||
| 393 | Ga0496123_0023453 | |||
| 394 | Ga0496124_0006938 | |||
| 395 | Ga0496124_0030132 | |||
| 396 | Ga0496124_0152678 | |||
| 397 | Ga0496125_0017983 | |||
| 398 | Ga0496126_0000343 | |||
| 399 | Ga0495678_000778 | |||
| 400 | Ga0495678_006620 | |||
| 401 | nmdc:mga05p37_70790_c1 | |||
| 402 | nmdc:mga0sz30_12299_c1 | |||
| 403 | Ga0500578_0003002 | |||
| 404 | Ga0500641_0001600 | |||
| 405 | Ga0500557_000543 | |||
| 406 | Ga0500608_000645 | |||
| 407 | Ga0500618_002671 | |||
| 408 | Ga0500559_0035903 | |||
| 409 | Ga0500568_0000355 | |||
| 410 | Ga0500568_0000781 | |||
| 411 | Ga0500573_0000040 | |||
| 412 | Ga0500574_000019 | |||
| 413 | Ga0500616_0001467 | |||
| 414 | Ga0500616_0001797 | |||
| 415 | Ga0500616_0002397 | |||
| 416 | Ga0500622_0000083 | |||
| 417 | Ga0500622_0000278 | |||
| 418 | Ga0500638_000458 | |||
| 419 | Ga0500636_0000119 | |||
| 420 | Ga0500636_0000790 | |||
| 421 | Ga0500636_0001389 | |||
| 422 | 2838127608 | |||
| 423 | 2511133165 | |||
| 424 | 2511198632 | |||
| 425 | 2513574041 | |||
| 426 | 2513910070 | |||
| 427 | 2513928801 | |||
| 428 | 2513930679 | |||
| 429 | 2515109907 | |||
| 430 | 2515109911 | |||
| 431 | 2515661776 | |||
| 432 | 2517107659 | |||
| 433 | 2520380297 | |||
| 434 | 2523469858 | |||
| 435 | 2585220573 | |||
| 436 | 2585221424 | |||
| 437 | 2585232177 | |||
| 438 | 2585332391 | |||
| 439 | 2585536836 | |||
| 440 | 2585544406 | |||
| 441 | 2585548376 | |||
| 442 | 2585563732 | |||
| 443 | 2585907070 | |||
| 444 | 2587982936 | |||
| 445 | 2599413875 | |||
| 446 | 2599414988 | |||
| 447 | 2644196130 | |||
| 448 | 2644196207 | |||
| 449 | 2644240893 | |||
| 450 | 2776258148 | |||
| 451 | 2776911511 | |||
| 452 | 2793331549 | |||
| 453 | 2793364483 | |||
| 454 | 2821130399 | |||
| 455 | 2838039285 | |||
| 456 | 2838042881 | |||
| 457 | 2838049482 | |||
| 458 | 2838668227 | |||
| 459 | 2838682375 | |||
| 460 | 2838696946 | |||
| 461 | 2838709813 | |||
| 462 | 2841941446 | |||
| 463 | 2841952543 | |||
| 464 | 2841967581 | |||
| 465 | 2841979023 | |||
| 466 | 2841986568 | |||
| 467 | 2842077987 | |||
| 468 | 2842119505 | |||
| 469 | 2842239226 | |||
| 470 | 2842291650 | |||
| 471 | 2842372941 | |||
| 472 | 2842378046 | |||
| 473 | 2842386013 | |||
| 474 | 2842398535 | |||
| 475 | 2857515289 | |||
| 476 | 2857537084 | |||
| 477 | 2881364878 | |||
| 478 | 2895518918 | |||
| 479 | 2919171114 | |||
| 480 | 2933022788 | |||
| 481 | 2935899187 | |||
| 482 | 3005413670 | |||
| 483 | 8005465941 | |||
| 484 | 8005465945 | |||
| 485 | 8005700841 | |||
| 486 | 8024493093 | |||
| 487 | 8056127539 | |||
| 488 | 8056876675 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 2fgk-assembly2.cif.gz_B | crystal structure of the abc-cassette e631q mutant of hlyb with bound atp | 0.9336 | 323 | 548 |
| 2ixe-assembly1.cif.gz_A | crystal structure of the atpase domain of tap1 with atp (d645n mutant) | 0.9271 | 314 | 551 |
| 5x7k-assembly2.cif.gz_B | crystal structure of the nucleotide-binding domain (nbd) of lipb, a abc transporter subunit of a type i secretion system | 0.9264 | 314 | 549 |
| 4k8o-assembly1.cif.gz_A-2 | crystal structure of the atpase domain of tap1 with atp (d645n, d651a mutant) | 0.9204 | 314 | 551 |
| 5x7k-assembly1.cif.gz_A | crystal structure of the nucleotide-binding domain (nbd) of lipb, a abc transporter subunit of a type i secretion system | 0.9189 | 314 | 549 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 5l22B02 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9603 | 323 | 551 | 3.40.50.300 |
| 5l22B02 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9522 | 323 | 551 | 3.40.50.300 |
| af_P9WQJ7_327_576_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9335 | 318 | 551 | 3.40.50.300 |
| af_A4I2J3_1020_1267_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9321 | 320 | 551 | 3.40.50.300 |
| 5x7kB00 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9264 | 314 | 549 | 3.40.50.300 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A6N8W048-F1-model_v4 | deleted | 0.9668 | 325 | 549 |
|
| AF-A0A519NP38-F1-model_v4 | ATP-binding cassette domain-containing protein | 0.9503 | 273 | 549 |
GO:0005524
GO:0016887 GO:0034040 |
| AF-A0A2M6Z094-F1-model_v4 | ABC transporter ATP-binding protein | 0.9332 | 344 | 551 |
GO:0005524
GO:0015421 GO:0016887 GO:0090374 |
| AF-A0A7W3T926-F1-model_v4 | ATP-binding cassette domain-containing protein | 0.926 | 343 | 546 |
GO:0005524
GO:0015421 GO:0016887 |
| AF-S8DPT3-F1-model_v4 | ABC transporter domain-containing protein | 0.9174 | 398 | 551 |
GO:0005524
GO:0005743 GO:0015421 GO:0016887 GO:0090374 |