F357365

General Info

Members Datasets Scaffolds Average Seq Length
245 154 490 245

Family's Representative Sequence

Representative Sequence 3300013105|Ga0157369_10320823|Ga0157369_103208232
Length 265
Sequence MSFIISTQSELLKTKRTAAFWLSMIGAAFIPAIFFLVYLLNSKKMILQFKMMPWEQHFGLGWNSLNSFLLPMYIILICAMIPQIEYKNNAWKQVFSSPQSTAEIFFSKFLTVHLMIILALLLFNVFMLLAAVVPNLIYKGYPFLHSKIDWQSLIRLNIKSYVSLLGISAIQFWLSLRFKSFIGPVGIGLALLIGSIIATGFDWEHVSKIPYAHPVLTLRSLAAERMSKPGTAHPFLQNHEWNSLGYFVFFTLLGFFDLRYRKEKG

Samples

Sample ID Description Type Environment
1 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
2 2162886011 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
6 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
7 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
8 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
9 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
10 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
11 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
12 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
13 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
14 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
15 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
16 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
17 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
18 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
19 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
20 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
21 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
22 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
23 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
24 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
25 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
26 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
27 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
28 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
29 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
30 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
31 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
32 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
33 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
34 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
35 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
36 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
37 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
38 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
39 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
40 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
41 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
42 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
43 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
44 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
45 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
46 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
47 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
48 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
49 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
50 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
51 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
52 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
54 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
55 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
56 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
57 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
58 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
59 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
60 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
61 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
62 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
63 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
64 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
65 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
66 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
67 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
68 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
69 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
70 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
71 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
72 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
73 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
111 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
112 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
113 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
114 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
115 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
116 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
117 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
118 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
119 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
120 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
121 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
122 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
123 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
124 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
125 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
126 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
127 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
128 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
129 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
130 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
131 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
132 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
133 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
134 3300049519 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_B_7_drought Metagenome Rhizosphere
135 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049649 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought Metagenome Rhizosphere
137 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
138 3300049674 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F11_A_3_drought Metagenome Rhizosphere
139 3300049675 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control Metagenome Rhizosphere
140 3300049681 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_B_3_drought Metagenome Rhizosphere
141 3300049708 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D14_A_3_control Metagenome Rhizosphere
142 3300049763 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_A_4_control Metagenome Rhizosphere
143 3300049765 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F14_B_4_drought Metagenome Rhizosphere
144 3300049769 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C13_B_4_drought Metagenome Rhizosphere
145 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
146 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
147 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
148 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
149 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
150 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
151 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
152 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
153 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
154 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.49
Nodule 0
Rhizoplane 0
Rhizosphere 90.2
Stem 0
Stem Tuber 0
Unclassified 12.65

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0157369_10320823 3300013105 Bacteria 1610
2 MRS1b_contig_7339412 2162886011 Bacteria 1848
3 rootH1_10054793 3300003316 Bacteria 9151
4 rootH1_10119927 3300003316 Bacteria 3381
5 rootL2_10019538 3300003322 Bacteria 19695
6 rootL2_10094686 3300003322 Bacteria 6035
7 rootL2_10117233 3300003322 Unclassified 3897
8 rootL2_10136092 3300003322 Bacteria 2016
9 rootL2_10221049 3300003322 Bacteria 1275
10 rootL2_10266607 3300003322 Bacteria 1018
11 rootH1_10262118 3300003323 Bacteria 1116
12 Ga0065714_10003022 3300005288 Bacteria 12842
13 Ga0065712_10034883 3300005290 Bacteria 1085
14 Ga0065712_10071150 3300005290 Bacteria 5451
15 Ga0070658_10029427 3300005327 Bacteria 4412
16 Ga0070683_100316491 3300005329 Bacteria 1485
17 Ga0070670_100120379 3300005331 Bacteria 2264
18 Ga0070670_100191693 3300005331 Unclassified 1775
19 Ga0070670_100326923 3300005331 Bacteria 1344
20 Ga0070670_100342974 3300005331 Unclassified 1312
21 Ga0070677_10115616 3300005333 Bacteria 1204
22 Ga0068869_100117190 3300005334 Bacteria 2033
23 Ga0068869_100249712 3300005334 Bacteria 1416
24 Ga0070666_10000907 3300005335 Bacteria 17995
25 Ga0068868_100004548 3300005338 Bacteria 9739
26 Ga0068868_100085728 3300005338 Bacteria 2531
27 Ga0068868_100220947 3300005338 Unclassified 1586
28 Ga0070689_100211451 3300005340 Bacteria 1588
29 Ga0070689_100287337 3300005340 Bacteria 1366
30 Ga0070668_100169679 3300005347 Bacteria 1776
31 Ga0070668_100469735 3300005347 Bacteria 1085
32 Ga0070669_100050658 3300005353 Unclassified 3034
33 Ga0070669_100489056 3300005353 Bacteria 1019
34 Ga0070675_100103940 3300005354 Unclassified 2395
35 Ga0070671_100037134 3300005355 Bacteria 4040
36 Ga0070674_100199679 3300005356 Bacteria 1543
37 Ga0070673_100033297 3300005364 Unclassified 3890
38 Ga0070673_100059836 3300005364 Unclassified 3016
39 Ga0070673_100247132 3300005364 Bacteria 1553
40 Ga0070673_100651222 3300005364 Bacteria 964
41 Ga0070688_100002392 3300005365 Bacteria 9476
42 Ga0070688_100122571 3300005365 Bacteria 1743
43 Ga0070688_100602475 3300005365 Bacteria 841
44 Ga0070667_100005294 3300005367 Bacteria 10779
45 Ga0070701_10156667 3300005438 Bacteria 1316
46 Ga0070700_100169130 3300005441 Unclassified 1512
47 Ga0070662_100233180 3300005457 Bacteria 1473
48 Ga0070685_10177905 3300005466 Bacteria 1367
49 Ga0070698_100282813 3300005471 Bacteria 1590
50 Ga0070679_100009178 3300005530 Bacteria 9340
51 Ga0068853_100136749 3300005539 Unclassified 2197
52 Ga0070672_100009605 3300005543 Bacteria 6674
53 Ga0070672_100577673 3300005543 Bacteria 978
54 Ga0070665_100070193 3300005548 Unclassified 3510
55 Ga0070665_100488208 3300005548 Bacteria 1243
56 Ga0068855_100001762 3300005563 Bacteria 27042
57 Ga0068857_100044916 3300005577 Bacteria 3919
58 Ga0068854_100475317 3300005578 Bacteria 1048
59 Ga0068856_100109399 3300005614 Bacteria 2760
60 Ga0068852_100057386 3300005616 Bacteria 3369
61 Ga0068859_100000131 3300005617 Bacteria 70847
62 Ga0068859_100006389 3300005617 Bacteria 11958
63 Ga0068859_100393327 3300005617 Bacteria 1482
64 Ga0068864_100009055 3300005618 Bacteria 8207
65 Ga0068864_100567242 3300005618 Bacteria 1099
66 Ga0068861_100071988 3300005719 Unclassified 2681
67 Ga0068861_100213235 3300005719 Bacteria 1628
68 Ga0068861_100303998 3300005719 Bacteria 1383
69 Ga0068861_100623347 3300005719 Bacteria 993
70 Ga0068851_10166810 3300005834 Bacteria 1213
71 Ga0068870_10008282 3300005840 Unclassified 4669
72 Ga0068870_10092699 3300005840 Bacteria 1692
73 Ga0068863_100022132 3300005841 Bacteria 6068
74 Ga0068858_100023225 3300005842 Bacteria 5783
75 Ga0068860_100009590 3300005843 Bacteria 9621
76 Ga0068860_100201719 3300005843 Bacteria 1928
77 Ga0068860_100581558 3300005843 Bacteria 1124
78 Ga0068862_100008288 3300005844 Bacteria 8600
79 Ga0068862_100192348 3300005844 Bacteria 1836
80 Ga0075366_10012525 3300006195 Bacteria 4812
81 Ga0075366_10112019 3300006195 Bacteria 1642
82 Ga0075366_10187767 3300006195 Unclassified 1256
83 Ga0097621_100268609 3300006237 Bacteria 1498
84 Ga0097621_100497328 3300006237 Bacteria 1104
85 Ga0068871_100005664 3300006358 Bacteria 8763
86 Ga0068871_100034392 3300006358 Bacteria 4021
87 Ga0068871_100349616 3300006358 Bacteria 1307
88 Ga0097620_100000131 3300006931 Bacteria 70847
89 Ga0097620_100006389 3300006931 Bacteria 11958
90 Ga0097620_100393294 3300006931 Bacteria 1482
91 Ga0105240_10253542 3300009093 Bacteria 2034
92 Ga0111539_10025230 3300009094 Bacteria 7287
93 Ga0111539_10081317 3300009094 Bacteria 3811
94 Ga0105247_10004832 3300009101 Bacteria 8577
95 Ga0114129_10002711 3300009147 Bacteria 24662
96 Ga0105241_10006516 3300009174 Bacteria 8605
97 Ga0105241_10168085 3300009174 Bacteria 1809
98 Ga0105242_10016542 3300009176 Bacteria 5734
99 Ga0105242_10217114 3300009176 Bacteria 1707
100 Ga0105248_11034381 3300009177 Bacteria 928
101 Ga0105237_10007874 3300009545 Bacteria 11614
102 Ga0105237_10028588 3300009545 Bacteria 5677
103 Ga0105237_10154401 3300009545 Unclassified 2292
104 Ga0105249_10006710 3300009553 Bacteria 10030
105 Ga0105249_10011288 3300009553 Bacteria 7841
106 Ga0105249_10026019 3300009553 Bacteria 5270
107 Ga0105249_10038801 3300009553 Bacteria 4322
108 Ga0105249_10075142 3300009553 Unclassified 3129
109 Ga0105249_10627527 3300009553 Bacteria 1131
110 Ga0099796_10092203 3300010159 Bacteria 1128
111 Ga0105239_10009789 3300010375 Bacteria 10772
112 Ga0105239_10161607 3300010375 Bacteria 2502
113 Ga0105246_10003563 3300011119 Bacteria 9423
114 Ga0105246_10040277 3300011119 Bacteria 3152
115 Ga0105246_10059005 3300011119 Bacteria 2660
116 Ga0157374_10035217 3300013296 Bacteria 4579
117 Ga0157378_10006086 3300013297 Bacteria 10571
118 Ga0157378_10027538 3300013297 Bacteria 5014
119 Ga0157378_10181165 3300013297 Bacteria 1982
120 Ga0163162_10013105 3300013306 Bacteria 8094
121 Ga0163162_10077911 3300013306 Unclassified 3379
122 Ga0163162_10126195 3300013306 Bacteria 2665
123 Ga0157372_10112277 3300013307 Bacteria 3123
124 Ga0157372_10468981 3300013307 Bacteria 1467
125 Ga0157372_10482677 3300013307 Bacteria 1445
126 Ga0157372_10566868 3300013307 Bacteria 1324
127 Ga0157372_10664769 3300013307 Bacteria 1213
128 Ga0157375_10021129 3300013308 Bacteria 5962
129 Ga0157375_10032759 3300013308 Bacteria 4931
130 Ga0157375_10036157 3300013308 Bacteria 4721
131 Ga0157375_10184945 3300013308 Bacteria 2236
132 Ga0163163_10122075 3300014325 Bacteria 2640
133 Ga0157380_10016878 3300014326 Bacteria 5391
134 Ga0157380_10055151 3300014326 Bacteria 3155
135 Ga0157380_10144121 3300014326 Unclassified 2051
136 Ga0157380_10245171 3300014326 Unclassified 1618
137 Ga0157380_10401510 3300014326 Bacteria 1301
138 Ga0157377_10247686 3300014745 Bacteria 1153
139 Ga0157379_10016598 3300014968 Bacteria 6476
140 Ga0157379_10199644 3300014968 Bacteria 1808
141 Ga0163161_10129322 3300017792 Bacteria 1903
142 Ga0163161_10250486 3300017792 Bacteria 1380
143 Ga0207656_10117526 3300025321 Bacteria 1235
144 Ga0207710_10034957 3300025900 Bacteria 2210
145 Ga0207688_10019221 3300025901 Unclassified 3720
146 Ga0207680_10000280 3300025903 Bacteria 24408
147 Ga0207645_10000093 3300025907 Bacteria 64854
148 Ga0207643_10102872 3300025908 Bacteria 1676
149 Ga0207705_10023125 3300025909 Bacteria 4433
150 Ga0207654_10028814 3300025911 Bacteria 3031
151 Ga0207671_10000157 3300025914 Bacteria 105839
152 Ga0207652_10006287 3300025921 Bacteria 9589
153 Ga0207650_10007842 3300025925 Bacteria 7273
154 Ga0207650_10138243 3300025925 Bacteria 1913
155 Ga0207659_10163874 3300025926 Unclassified 1748
156 Ga0207644_10019898 3300025931 Bacteria 4559
157 Ga0207706_10040814 3300025933 Unclassified 4114
158 Ga0207670_10054261 3300025936 Unclassified 2704
159 Ga0207669_10245383 3300025937 Bacteria 1330
160 Ga0207691_10009523 3300025940 Bacteria 9328
161 Ga0207691_10068471 3300025940 Bacteria 3207
162 Ga0207689_10021205 3300025942 Bacteria 5462
163 Ga0207667_10019555 3300025949 Bacteria 7556
164 Ga0207651_10408085 3300025960 Bacteria 1157
165 Ga0207712_10017687 3300025961 Bacteria 4634
166 Ga0207712_10021152 3300025961 Bacteria 4268
167 Ga0207712_10044498 3300025961 Unclassified 3068
168 Ga0207712_10044603 3300025961 Bacteria 3065
169 Ga0207712_10459699 3300025961 Bacteria 1081
170 Ga0207668_10077139 3300025972 Bacteria 2401
171 Ga0207658_10142352 3300025986 Bacteria 1942
172 Ga0207658_10271867 3300025986 Bacteria 1449
173 Ga0207677_10005212 3300026023 Bacteria 7035
174 Ga0207677_10026819 3300026023 Bacteria 3619
175 Ga0207703_10010594 3300026035 Bacteria 7203
176 Ga0207639_10386363 3300026041 Bacteria 1258
177 Ga0207708_10659317 3300026075 Bacteria 891
178 Ga0207641_10015174 3300026088 Bacteria 6314
179 Ga0207648_10001844 3300026089 Bacteria 23186
180 Ga0207648_10031425 3300026089 Bacteria 4695
181 Ga0207648_10359699 3300026089 Unclassified 1313
182 Ga0207676_10036859 3300026095 Bacteria 3722
183 Ga0207674_10074823 3300026116 Unclassified 3398
184 Ga0207675_100002214 3300026118 Bacteria 19316
185 Ga0207675_100008512 3300026118 Bacteria 9652
186 Ga0207675_100014974 3300026118 Bacteria 7240
187 Ga0207675_100274328 3300026118 Unclassified 1637
188 Ga0207675_100327314 3300026118 Bacteria 1497
189 Ga0207683_10000788 3300026121 Bacteria 28890
190 Ga0207698_10041032 3300026142 Bacteria 3445
191 Ga0207698_10154894 3300026142 Bacteria 1995
192 Ga0268266_10302531 3300028379 Bacteria 1492
193 Ga0268265_10033370 3300028380 Bacteria 3742
194 Ga0268264_10003209 3300028381 Bacteria 14165
195 Ga0268264_10060541 3300028381 Bacteria 3173
196 Ga0268264_10233544 3300028381 Bacteria 1699
197 Ga0268264_10892083 3300028381 Bacteria 892
198 Ga0307511_10000046 3300030521 Bacteria 100284
199 Ga0307513_10382869 3300031456 Bacteria 1146
200 Ga0307509_10023213 3300031507 Bacteria 6973
201 Ga0307406_10043198 3300031901 Bacteria 2818
202 Ga0307409_100290262 3300031995 Bacteria 1517
203 Ga0307414_10652706 3300032004 Unclassified 949
204 Ga0395899_0217405 3300037312 Bacteria 1325
205 Ga0395900_0001230 3300037418 Bacteria 31468
206 Ga0395898_0002228 3300037466 Bacteria 23596
207 Ga0451853_0321221 3300041512 Bacteria 1902
208 Ga0439431_0017792 3300041997 Bacteria 1675
209 Ga0439433_0033483 3300041999 Bacteria 1181
210 Ga0439445_0048802 3300042004 Bacteria 1139
211 Ga0450898_006031 3300042134 Bacteria 1850
212 Ga0439434_0010592 3300042435 Bacteria 2719
213 Ga0466969_0000910 3300044656 Bacteria 15962
214 Ga0466969_0231007 3300044656 Unclassified 840
215 Ga0466966_0000074 3300044684 Bacteria 63538
216 Ga0466959_0000031 3300045049 Bacteria 111271
217 Ga0495638_0000006 3300046460 Bacteria 668846
218 Ga0495650_0045826 3300046471 Bacteria 1839
219 Ga0495643_0036807 3300046522 Bacteria 2687
220 Ga0495598_0088416 3300046537 Bacteria 1006
221 Ga0495621_0044665 3300046539 Bacteria 1567
222 Ga0495668_0007256 3300046616 Bacteria 7112
223 Ga0501296_007197 3300049519 Bacteria 1274
224 Ga0501047_0134819 3300049581 Bacteria 2350
225 Ga0501198_003330 3300049649 Bacteria 2190
226 Ga0501202_009422 3300049652 Bacteria 1795
227 Ga0501202_032854 3300049652 Bacteria 1091
228 Ga0501242_007398 3300049674 Bacteria 1266
229 Ga0501243_005514 3300049675 Bacteria 1901
230 Ga0501251_003930 3300049681 Bacteria 1510
231 Ga0501245_003171 3300049708 Bacteria 2222
232 Ga0501266_010301 3300049763 Bacteria 1189
233 Ga0501268_001637 3300049765 Bacteria 2828
234 Ga0501272_014486 3300049769 Bacteria 911
235 nmdc:mga0k408_41817_c1 3300050493 Bacteria 2639
236 nmdc:mga0k408_88767_c1 3300050493 Bacteria 1815
237 nmdc:mga05p37_28476_c1 3300050507 Bacteria 6811
238 nmdc:mga08y16_34207_c1 3300050511 Bacteria 5338
239 Ga0500578_0022562 3300053086 Bacteria 4042
240 Ga0500583_0000014 3300053092 Bacteria 147919
241 Ga0500652_013303 3300053131 Bacteria 2911
242 Ga0500604_0005191 3300053151 Bacteria 3441
243 Ga0500622_0094381 3300053156 Unclassified 1480
244 Ga0500639_018408 3300053163 Bacteria 3686
245 Ga0466962_0147036 3300061719 Unclassified 1143
246 Ga0157369_10320823
247 MRS1b_contig_7339412
248 rootH1_10054793
249 rootH1_10119927
250 rootL2_10019538
251 rootL2_10094686
252 rootL2_10117233
253 rootL2_10136092
254 rootL2_10221049
255 rootL2_10266607
256 rootH1_10262118
257 Ga0065714_10003022
258 Ga0065712_10034883
259 Ga0065712_10071150
260 Ga0070658_10029427
261 Ga0070683_100316491
262 Ga0070670_100120379
263 Ga0070670_100191693
264 Ga0070670_100326923
265 Ga0070670_100342974
266 Ga0070677_10115616
267 Ga0068869_100117190
268 Ga0068869_100249712
269 Ga0070666_10000907
270 Ga0068868_100004548
271 Ga0068868_100085728
272 Ga0068868_100220947
273 Ga0070689_100211451
274 Ga0070689_100287337
275 Ga0070668_100169679
276 Ga0070668_100469735
277 Ga0070669_100050658
278 Ga0070669_100489056
279 Ga0070675_100103940
280 Ga0070671_100037134
281 Ga0070674_100199679
282 Ga0070673_100033297
283 Ga0070673_100059836
284 Ga0070673_100247132
285 Ga0070673_100651222
286 Ga0070688_100002392
287 Ga0070688_100122571
288 Ga0070688_100602475
289 Ga0070667_100005294
290 Ga0070701_10156667
291 Ga0070700_100169130
292 Ga0070662_100233180
293 Ga0070685_10177905
294 Ga0070698_100282813
295 Ga0070679_100009178
296 Ga0068853_100136749
297 Ga0070672_100009605
298 Ga0070672_100577673
299 Ga0070665_100070193
300 Ga0070665_100488208
301 Ga0068855_100001762
302 Ga0068857_100044916
303 Ga0068854_100475317
304 Ga0068856_100109399
305 Ga0068852_100057386
306 Ga0068859_100000131
307 Ga0068859_100006389
308 Ga0068859_100393327
309 Ga0068864_100009055
310 Ga0068864_100567242
311 Ga0068861_100071988
312 Ga0068861_100213235
313 Ga0068861_100303998
314 Ga0068861_100623347
315 Ga0068851_10166810
316 Ga0068870_10008282
317 Ga0068870_10092699
318 Ga0068863_100022132
319 Ga0068858_100023225
320 Ga0068860_100009590
321 Ga0068860_100201719
322 Ga0068860_100581558
323 Ga0068862_100008288
324 Ga0068862_100192348
325 Ga0075366_10012525
326 Ga0075366_10112019
327 Ga0075366_10187767
328 Ga0097621_100268609
329 Ga0097621_100497328
330 Ga0068871_100005664
331 Ga0068871_100034392
332 Ga0068871_100349616
333 Ga0097620_100000131
334 Ga0097620_100006389
335 Ga0097620_100393294
336 Ga0105240_10253542
337 Ga0111539_10025230
338 Ga0111539_10081317
339 Ga0105247_10004832
340 Ga0114129_10002711
341 Ga0105241_10006516
342 Ga0105241_10168085
343 Ga0105242_10016542
344 Ga0105242_10217114
345 Ga0105248_11034381
346 Ga0105237_10007874
347 Ga0105237_10028588
348 Ga0105237_10154401
349 Ga0105249_10006710
350 Ga0105249_10011288
351 Ga0105249_10026019
352 Ga0105249_10038801
353 Ga0105249_10075142
354 Ga0105249_10627527
355 Ga0099796_10092203
356 Ga0105239_10009789
357 Ga0105239_10161607
358 Ga0105246_10003563
359 Ga0105246_10040277
360 Ga0105246_10059005
361 Ga0157374_10035217
362 Ga0157378_10006086
363 Ga0157378_10027538
364 Ga0157378_10181165
365 Ga0163162_10013105
366 Ga0163162_10077911
367 Ga0163162_10126195
368 Ga0157372_10112277
369 Ga0157372_10468981
370 Ga0157372_10482677
371 Ga0157372_10566868
372 Ga0157372_10664769
373 Ga0157375_10021129
374 Ga0157375_10032759
375 Ga0157375_10036157
376 Ga0157375_10184945
377 Ga0163163_10122075
378 Ga0157380_10016878
379 Ga0157380_10055151
380 Ga0157380_10144121
381 Ga0157380_10245171
382 Ga0157380_10401510
383 Ga0157377_10247686
384 Ga0157379_10016598
385 Ga0157379_10199644
386 Ga0163161_10129322
387 Ga0163161_10250486
388 Ga0207656_10117526
389 Ga0207710_10034957
390 Ga0207688_10019221
391 Ga0207680_10000280
392 Ga0207645_10000093
393 Ga0207643_10102872
394 Ga0207705_10023125
395 Ga0207654_10028814
396 Ga0207671_10000157
397 Ga0207652_10006287
398 Ga0207650_10007842
399 Ga0207650_10138243
400 Ga0207659_10163874
401 Ga0207644_10019898
402 Ga0207706_10040814
403 Ga0207670_10054261
404 Ga0207669_10245383
405 Ga0207691_10009523
406 Ga0207691_10068471
407 Ga0207689_10021205
408 Ga0207667_10019555
409 Ga0207651_10408085
410 Ga0207712_10017687
411 Ga0207712_10021152
412 Ga0207712_10044498
413 Ga0207712_10044603
414 Ga0207712_10459699
415 Ga0207668_10077139
416 Ga0207658_10142352
417 Ga0207658_10271867
418 Ga0207677_10005212
419 Ga0207677_10026819
420 Ga0207703_10010594
421 Ga0207639_10386363
422 Ga0207708_10659317
423 Ga0207641_10015174
424 Ga0207648_10001844
425 Ga0207648_10031425
426 Ga0207648_10359699
427 Ga0207676_10036859
428 Ga0207674_10074823
429 Ga0207675_100002214
430 Ga0207675_100008512
431 Ga0207675_100014974
432 Ga0207675_100274328
433 Ga0207675_100327314
434 Ga0207683_10000788
435 Ga0207698_10041032
436 Ga0207698_10154894
437 Ga0268266_10302531
438 Ga0268265_10033370
439 Ga0268264_10003209
440 Ga0268264_10060541
441 Ga0268264_10233544
442 Ga0268264_10892083
443 Ga0307511_10000046
444 Ga0307513_10382869
445 Ga0307509_10023213
446 Ga0307406_10043198
447 Ga0307409_100290262
448 Ga0307414_10652706
449 Ga0395899_0217405
450 Ga0395900_0001230
451 Ga0395898_0002228
452 Ga0451853_0321221
453 Ga0439431_0017792
454 Ga0439433_0033483
455 Ga0439445_0048802
456 Ga0450898_006031
457 Ga0439434_0010592
458 Ga0466969_0000910
459 Ga0466969_0231007
460 Ga0466966_0000074
461 Ga0466959_0000031
462 Ga0495638_0000006
463 Ga0495650_0045826
464 Ga0495643_0036807
465 Ga0495598_0088416
466 Ga0495621_0044665
467 Ga0495668_0007256
468 Ga0501296_007197
469 Ga0501047_0134819
470 Ga0501198_003330
471 Ga0501202_009422
472 Ga0501202_032854
473 Ga0501242_007398
474 Ga0501243_005514
475 Ga0501251_003930
476 Ga0501245_003171
477 Ga0501266_010301
478 Ga0501268_001637
479 Ga0501272_014486
480 nmdc:mga0k408_41817_c1
481 nmdc:mga0k408_88767_c1
482 nmdc:mga05p37_28476_c1
483 nmdc:mga08y16_34207_c1
484 Ga0500578_0022562
485 Ga0500583_0000014
486 Ga0500652_013303
487 Ga0500604_0005191
488 Ga0500622_0094381
489 Ga0500639_018408
490 Ga0466962_0147036

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12730

ABC2_membrane_4

ABC-2 family transporter protein

6

195

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
7r87-assembly1.cif.gz_B the structure of human abcg5-wt/abcg8-i419e 0.5793 23 250
7o0z-assembly1.cif.gz_E abc transporter nosfy, nucleotide-free in gdn 0.5643 8 241
7znq-assembly1.cif.gz_y abc transporter complex nosdfyl in gdn 0.5613 8 241
7o17-assembly1.cif.gz_D abc transporter nosdfy e154q, atp-bound in lipid nanodisc 0.5512 63 241
7o12-assembly1.cif.gz_E abc transporter nosdfy, amppnp-bound in gdn 0.5437 8 241
ID Description Score Start End Superfamily
af_A0A2R8QMX4_332_689_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.4051 62 241 3.40.1710.10
1us7B01 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;Cdc37, Hsp90 binding domain 0.3987 140 249 1.20.58.610
af_Q6RYS9_7_266_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.3915 62 249 1.20.1070.10
af_A0A2R8QMX4_332_689_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.3354 62 241 3.40.1710.10
af_Q17661_216_431_1.20.120.1770 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A); 0.3255 52 249 1.20.120.1770
ID Description Score Start End GO Terms
AF-A0A2A4YUZ1-F1-model_v4 ABC transporter permease 0.9006 9 244 GO:0016020
AF-A0A4Q5YMS1-F1-model_v4 deleted 0.8597 3 250
AF-A0A249SQ50-F1-model_v4 ABC transporter permease 0.8554 1 248 GO:0016020
AF-A0A1Q3PQ96-F1-model_v4 ABC transporter permease 0.8514 9 240 GO:0016020
AF-A0A4Q5SQH6-F1-model_v4 ABC transporter permease 0.85 1 250 GO:0016020

Map