F357388

General Info

Members Datasets Scaffolds Average Seq Length
245 165 241 304

Family's Representative Sequence

Representative Sequence 3300014325|Ga0163163_10081540|Ga0163163_100815401
Length 330
Sequence MKAAHQKLISCTTPAKAKSRRAFFSRLSLAAAGFAVAPQMVRAAEPEAQTAHPARKVKLGISTYSYWHFRPPRVSIETVIEKASELGVEGVDILHRQMDSEDRAYLQKLKRHAFLNGVDLISLSIHQNFVNPNISERQKEIDHTHRCIELACQMGIPSIRLNSGRWNTIASFDKLMEARGEEPVLPGYTEDEGFKWCIESIEKCLPKAAECGVLLALENHWGLSRTPEGLLRIVNTIKSPWLGVLMDTGNFLEDPYDKLRQIAPKTVFVQAKTYYGGGEWYTLDLDYRRIAKILAEVNYRGYVSIEFEGKENSDSGVRKSIEMLRTAFSL

Samples

Sample ID Description Type Environment
1 2687453341 Pirellula sp. SH-Sr6A Isolate Unclassified
2 2842903701 Olivibacter sp. R-72191 Isolate Unclassified
3 2883068021 Chitinophaga rhizosphaerae T16R-86 Isolate Rhizosphere
4 2896085136 Chitinophaga alhagiae T22 Isolate Unclassified
5 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
6 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
7 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
8 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
9 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
10 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
11 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
12 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
13 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
14 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
15 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
16 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
17 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
18 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
19 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
20 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
21 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
22 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
23 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
24 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
25 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
26 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
27 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
28 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
29 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
30 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
31 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
32 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
33 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
34 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
35 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
36 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
37 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
38 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
39 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
40 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
41 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
42 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
43 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
44 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
45 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
46 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
47 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
48 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
49 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
50 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
51 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
52 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
53 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
54 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
55 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
56 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
57 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
58 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
59 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
60 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
61 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
62 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
63 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
64 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
65 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
66 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
67 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
68 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
69 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
70 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
71 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
72 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
73 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
74 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
75 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
76 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
106 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
109 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
110 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
111 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
112 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
113 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
114 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
115 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
116 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
117 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
118 3300042132 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_070716_133 Metagenome Rhizosphere
119 3300042133 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB1023D_E14_070716_134 Metagenome Rhizosphere
120 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
121 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
122 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
123 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
124 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
125 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
126 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
127 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
128 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
129 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
130 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
131 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
132 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
137 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
138 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
139 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
140 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
141 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
142 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
143 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
144 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
145 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
146 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
147 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
148 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
149 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
150 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
151 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
152 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
153 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
154 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
155 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
156 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
157 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
158 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
159 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
160 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
161 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
162 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
163 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
164 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
165 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.37
Metatranscriptomes 0
Isolates 1.63

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.71
Nodule 0
Rhizoplane 0
Rhizosphere 92.65
Stem 0
Stem Tuber 0
Unclassified 1.63

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0055531_10000430 3300003794 Bacteria 39781
2 Ga0065707_10117501 3300005295 Bacteria 2209
3 Ga0065707_10196951 3300005295 Bacteria 1330
4 Ga0070658_10000570 3300005327 Bacteria 32096
5 Ga0070690_100092865 3300005330 Bacteria 1990
6 Ga0070670_100133723 3300005331 Bacteria 2142
7 Ga0070670_100265178 3300005331 Bacteria 1498
8 Ga0070677_10028692 3300005333 Bacteria 2104
9 Ga0068869_100075241 3300005334 Bacteria 2508
10 Ga0068869_100169773 3300005334 Bacteria 1703
11 Ga0070666_10046535 3300005335 Bacteria 2910
12 Ga0068868_100075061 3300005338 Bacteria 2701
13 Ga0070689_100018548 3300005340 Bacteria 5129
14 Ga0070689_100019776 3300005340 Bacteria 4983
15 Ga0070687_100004763 3300005343 Bacteria 5432
16 Ga0070668_100086844 3300005347 Bacteria 2460
17 Ga0070668_100156824 3300005347 Bacteria 1844
18 Ga0070674_100274939 3300005356 Bacteria 1333
19 Ga0070674_100335593 3300005356 Bacteria 1216
20 Ga0070673_100021237 3300005364 Bacteria 4701
21 Ga0070673_100031863 3300005364 Bacteria 3961
22 Ga0070688_100023530 3300005365 Bacteria 3624
23 Ga0070667_100007347 3300005367 Bacteria 9155
24 Ga0070667_100061233 3300005367 Bacteria 3186
25 Ga0070714_100308012 3300005435 Bacteria 1478
26 Ga0070701_10009788 3300005438 Bacteria 4213
27 Ga0070705_100270116 3300005440 Unclassified 1204
28 Ga0070694_100088979 3300005444 Bacteria 2163
29 Ga0070694_100330449 3300005444 Unclassified 1176
30 Ga0070708_100085331 3300005445 Unclassified 2865
31 Ga0070678_100132649 3300005456 Bacteria 1982
32 Ga0068867_100220439 3300005459 Bacteria 1528
33 Ga0070685_10040452 3300005466 Bacteria 2653
34 Ga0070685_10049621 3300005466 Bacteria 2421
35 Ga0070707_100000387 3300005468 Bacteria 43320
36 Ga0070707_100554920 3300005468 Bacteria 1111
37 Ga0070699_100188092 3300005518 Bacteria 1834
38 Ga0070699_100269979 3300005518 Unclassified 1522
39 Ga0070699_100480740 3300005518 Bacteria 1127
40 Ga0068853_100000004 3300005539 Bacteria 405732
41 Ga0070672_100019706 3300005543 Bacteria 4902
42 Ga0070672_100045449 3300005543 Bacteria 3397
43 Ga0070686_100000833 3300005544 Bacteria 17871
44 Ga0070696_100024402 3300005546 Bacteria 4109
45 Ga0070665_100285277 3300005548 Bacteria 1653
46 Ga0070704_100002933 3300005549 Bacteria 9691
47 Ga0070704_100051732 3300005549 Bacteria 2894
48 Ga0070704_100080398 3300005549 Bacteria 2397
49 Ga0070704_100482558 3300005549 Bacteria 1073
50 Ga0068855_100062346 3300005563 Bacteria 4353
51 Ga0068855_100074989 3300005563 Bacteria 3928
52 Ga0070702_100184596 3300005615 Bacteria 1368
53 Ga0068859_100022906 3300005617 Bacteria 6262
54 Ga0068859_100310490 3300005617 Bacteria 1670
55 Ga0068866_10048707 3300005718 Bacteria 2143
56 Ga0068870_10183041 3300005840 Bacteria 1259
57 Ga0068863_100204463 3300005841 Bacteria 1900
58 Ga0068860_100026447 3300005843 Bacteria 5593
59 Ga0068862_100137299 3300005844 Unclassified 2168
60 Ga0081539_10000382 3300005985 Bacteria 96235
61 Ga0081539_10027954 3300005985 Bacteria 3557
62 Ga0075367_10006158 3300006178 Bacteria 6038
63 Ga0075367_10034209 3300006178 Bacteria 2934
64 Ga0075366_10059824 3300006195 Bacteria 2263
65 Ga0097621_100055734 3300006237 Bacteria 3228
66 Ga0068871_100030011 3300006358 Bacteria 4277
67 Ga0075428_100569907 3300006844 Bacteria 1210
68 Ga0075430_100011163 3300006846 Bacteria 7615
69 Ga0075433_10015953 3300006852 Bacteria 6176
70 Ga0075434_100033098 3300006871 Bacteria 5100
71 Ga0075434_100326292 3300006871 Bacteria 1555
72 Ga0075429_100045220 3300006880 Unclassified 3830
73 Ga0075429_100047349 3300006880 Bacteria 3740
74 Ga0068865_100008161 3300006881 Bacteria 6463
75 Ga0068865_100013215 3300006881 Bacteria 5212
76 Ga0097620_100022906 3300006931 Bacteria 6262
77 Ga0097620_100310497 3300006931 Bacteria 1670
78 Ga0111539_10029897 3300009094 Bacteria 6627
79 Ga0111539_10186912 3300009094 Bacteria 2419
80 Ga0111539_10316839 3300009094 Unclassified 1815
81 Ga0111539_10411162 3300009094 Bacteria 1576
82 Ga0111539_10417665 3300009094 Unclassified 1562
83 Ga0114129_10035825 3300009147 Bacteria 7008
84 Ga0114129_10084117 3300009147 Bacteria 4418
85 Ga0114129_10095896 3300009147 Bacteria 4107
86 Ga0105243_10007205 3300009148 Bacteria 8546
87 Ga0105242_10030713 3300009176 Bacteria 4291
88 Ga0105242_10047359 3300009176 Unclassified 3490
89 Ga0105248_10007925 3300009177 Bacteria 11674
90 Ga0105238_10394358 3300009551 Unclassified 1377
91 Ga0105249_10110290 3300009553 Bacteria 2600
92 Ga0105249_10298493 3300009553 Bacteria 1615
93 Ga0105249_10669289 3300009553 Bacteria 1097
94 Ga0105239_10075093 3300010375 Bacteria 3716
95 Ga0105246_10002209 3300011119 Bacteria 11744
96 Ga0105246_10181347 3300011119 Bacteria 1622
97 Ga0157374_10068369 3300013296 Bacteria 3342
98 Ga0157378_10058629 3300013297 Bacteria 3434
99 Ga0157378_10335096 3300013297 Bacteria 1474
100 Ga0163162_10067538 3300013306 Bacteria 3625
101 Ga0157372_10100126 3300013307 Bacteria 3306
102 Ga0157375_10111544 3300013308 Bacteria 2834
103 Ga0157375_10338316 3300013308 Bacteria 1670
104 Ga0163163_10081540 3300014325 Bacteria 3237
105 Ga0157380_10000621 3300014326 Bacteria 21796
106 Ga0157377_10062138 3300014745 Bacteria 2136
107 Ga0157379_10034685 3300014968 Bacteria 4499
108 Ga0209257_1000006 3300025304 Bacteria 1570111
109 Ga0207680_10062203 3300025903 Unclassified 2279
110 Ga0207645_10001414 3300025907 Bacteria 19668
111 Ga0207643_10090253 3300025908 Bacteria 1786
112 Ga0207705_10004723 3300025909 Bacteria 10263
113 Ga0207684_10153352 3300025910 Unclassified 1983
114 Ga0207662_10001679 3300025918 Bacteria 10834
115 Ga0207646_10000140 3300025922 Bacteria 98858
116 Ga0207681_10101268 3300025923 Bacteria 2078
117 Ga0207650_10057275 3300025925 Unclassified 2898
118 Ga0207659_10209477 3300025926 Bacteria 1561
119 Ga0207686_10048634 3300025934 Bacteria 2628
120 Ga0207670_10002463 3300025936 Bacteria 9707
121 Ga0207670_10016488 3300025936 Bacteria 4441
122 Ga0207670_10250102 3300025936 Bacteria 1369
123 Ga0207669_10008635 3300025937 Bacteria 4796
124 Ga0207704_10315192 3300025938 Bacteria 1204
125 Ga0207691_10027428 3300025940 Bacteria 5340
126 Ga0207691_10033492 3300025940 Bacteria 4783
127 Ga0207711_10100585 3300025941 Bacteria 2557
128 Ga0207689_10007272 3300025942 Bacteria 9720
129 Ga0207689_10099102 3300025942 Bacteria 2394
130 Ga0207689_10154683 3300025942 Bacteria 1890
131 Ga0207679_10315164 3300025945 Bacteria 1353
132 Ga0207651_10133323 3300025960 Bacteria 1906
133 Ga0207712_10310756 3300025961 Unclassified 1297
134 Ga0207712_10357483 3300025961 Bacteria 1216
135 Ga0207658_10207222 3300025986 Bacteria 1641
136 Ga0207703_10153489 3300026035 Bacteria 2010
137 Ga0207639_10000002 3300026041 Bacteria 903066
138 Ga0207639_10097028 3300026041 Unclassified 2373
139 Ga0207708_10024402 3300026075 Bacteria 4574
140 Ga0207641_10468923 3300026088 Bacteria 1219
141 Ga0207648_10003652 3300026089 Bacteria 16108
142 Ga0207648_10006614 3300026089 Bacteria 11513
143 Ga0207674_10040523 3300026116 Bacteria 4824
144 Ga0207675_100027011 3300026118 Bacteria 5344
145 Ga0207683_10005960 3300026121 Bacteria 10443
146 Ga0207683_10043172 3300026121 Bacteria 3940
147 Ga0207428_10048474 3300027907 Bacteria 3408
148 Ga0268265_10099292 3300028380 Unclassified 2347
149 Ga0268264_10028527 3300028381 Bacteria 4566
150 Ga0268264_10029695 3300028381 Bacteria 4481
151 Ga0316177_1117106 3300030731 Bacteria 4858
152 Ga0316183_1020579 3300030742 Bacteria 15543
153 Ga0316181_1024402 3300030744 Bacteria 4759
154 Ga0307516_10202474 3300031730 Bacteria 1704
155 Ga0307407_10287671 3300031903 Unclassified 1141
156 Ga0307416_100162432 3300032002 Bacteria 2066
157 Ga0307416_100172422 3300032002 Bacteria 2016
158 Ga0373931_0206289 3300035691 Bacteria 1177
159 Ga0395905_0217387 3300037471 Unclassified 1789
160 Ga0395905_0384663 3300037471 Bacteria 1297
161 Ga0439431_0009520 3300041997 Unclassified 2196
162 Ga0450894_001980 3300042131 Unclassified 2827
163 Ga0450895_000246 3300042132 Bacteria 2764
164 Ga0450896_002275 3300042133 Bacteria 2467
165 Ga0450908_010077 3300042184 Bacteria 1748
166 Ga0439434_0006915 3300042435 Bacteria 3315
167 Ga0450918_005246 3300042531 Bacteria 2336
168 Ga0451577_0001371 3300042876 Bacteria 32732
169 Ga0451577_0021710 3300042876 Bacteria 5871
170 Ga0451577_0026961 3300042876 Bacteria 5201
171 Ga0451577_0056427 3300042876 Bacteria 3503
172 Ga0451577_0524719 3300042876 Bacteria 1075
173 Ga0453683_0020794 3300044673 Unclassified 4193
174 Ga0453683_0023025 3300044673 Unclassified 3970
175 Ga0453684_0004654 3300044712 Bacteria 28509
176 Ga0453684_0020130 3300044712 Bacteria 10096
177 Ga0453684_0036029 3300044712 Bacteria 6826
178 Ga0453684_0106231 3300044712 Bacteria 3422
179 Ga0453684_0673919 3300044712 Bacteria 1126
180 Ga0451576_0044939 3300045051 Bacteria 4654
181 Ga0451576_0070207 3300045051 Bacteria 3646
182 Ga0451576_0102727 3300045051 Bacteria 2974
183 Ga0451576_0207128 3300045051 Unclassified 2048
184 Ga0451576_0252508 3300045051 Bacteria 1843
185 Ga0451576_0265328 3300045051 Bacteria 1795
186 Ga0495603_0169478 3300046455 Unclassified 1265
187 Ga0495638_0013600 3300046460 Bacteria 5532
188 Ga0495657_0136488 3300046675 Bacteria 1532
189 Ga0495658_0036465 3300046683 Bacteria 2713
190 Ga0495686_0002891 3300047472 Bacteria 15417
191 Ga0501031_0281815 3300049568 Bacteria 1078
192 Ga0501034_0257329 3300049571 Bacteria 1689
193 Ga0501034_0320607 3300049571 Bacteria 1483
194 Ga0501042_0012825 3300049578 Bacteria 5691
195 Ga0501048_0447786 3300049582 Unclassified 925
196 Ga0501071_0067188 3300049587 Bacteria 2607
197 Ga0501072_0042286 3300049588 Bacteria 3580
198 Ga0501074_0281229 3300049590 Bacteria 1183
199 Ga0501075_0058346 3300049591 Unclassified 2907
200 Ga0501076_0029643 3300049592 Bacteria 4257
201 Ga0501076_0052852 3300049592 Bacteria 3219
202 Ga0501217_010749 3300049661 Bacteria 2012
203 Ga0501225_0006040 3300049705 Bacteria 3540
204 Ga0501079_0062484 3300049741 Bacteria 2873
205 Ga0501080_0132874 3300049742 Bacteria 2304
206 Ga0501081_0192516 3300049743 Bacteria 1477
207 Ga0501035_0302290 3300049822 Unclassified 1348
208 Ga0501045_0204506 3300049824 Bacteria 1471
209 nmdc:mga03683_105462_c1 3300050489 Unclassified 1242
210 nmdc:mga0k408_232679_c1 3300050493 Bacteria 1100
211 nmdc:mga0k408_36413_c1 3300050493 Bacteria 2824
212 nmdc:mga0k408_73709_c1 3300050493 Bacteria 1994
213 nmdc:mga06z11_40089_c1 3300050494 Bacteria 2335
214 nmdc:mga06z11_62239_c1 3300050494 Bacteria 1949
215 nmdc:mga05p37_21606_c1 3300050507 Bacteria 7797
216 nmdc:mga05p37_28849_c1 3300050507 Bacteria 6769
217 nmdc:mga05p37_341986_c1 3300050507 Unclassified 1764
218 nmdc:mga05p37_77243_c1 3300050507 Bacteria 4099
219 nmdc:mga09592_67540_c1 3300050508 Bacteria 3033
220 nmdc:mga09592_98102_c1 3300050508 Bacteria 2508
221 nmdc:mga0qj67_6341_c2 3300050509 Bacteria 6592
222 nmdc:mga06r32_5959_c1 3300050510 Bacteria 10967
223 nmdc:mga08y16_15519_c1 3300050511 Bacteria 8010
224 nmdc:mga08y16_333074_c1 3300050511 Unclassified 1561
225 nmdc:mga08y16_83544_c1 3300050511 Bacteria 3328
226 nmdc:mga0n895_241040_c1 3300050512 Bacteria 1835
227 nmdc:mga0n895_42924_c1 3300050512 Bacteria 4403
228 nmdc:mga0n895_53186_c1 3300050512 Unclassified 3978
229 nmdc:mga0rr50_35067_c1 3300050513 Bacteria 3600
230 nmdc:mga0a205_5287_c1 3300050515 Bacteria 11626
231 nmdc:mga0a205_657_c1 3300050515 Bacteria 27554
232 Ga0500641_0047458 3300053096 Bacteria 1756
233 Ga0500568_0004103 3300053139 Bacteria 7884
234 Ga0500616_0000226 3300053153 Bacteria 88101
235 Ga0590071_000106 3300059421 Bacteria 23746
236 Ga0590074_003358 3300059423 Bacteria 2643
237 Ga0590075_001053 3300059424 Bacteria 7123
238 Ga0590075_001225 3300059424 Bacteria 6492
239 Ga0590075_011041 3300059424 Unclassified 2180
240 Ga0590077_000606 3300059426 Bacteria 9702
241 Ga0590077_005691 3300059426 Bacteria 2548

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300049822 Ga0501035_0302290 Ga0501035_0302290_540_1331 250
2 3300026088 Ga0207641_10468923 Ga0207641_104689232 253
3 3300006880 Ga0075429_100047349 Ga0075429_1000473493 258
4 3300005518 Ga0070699_100188092 Ga0070699_1001880922 264
5 3300045051 Ga0451576_0070207 Ga0451576_0070207_2289_3275 264
6 3300005295 Ga0065707_10117501 Ga0065707_101175012 269
7 3300009094 Ga0111539_10316839 Ga0111539_103168392 269
8 3300049582 Ga0501048_0447786 Ga0501048_0447786_98_907 269
9 3300050513 nmdc:mga0rr50_35067_c1 nmdc:mga0rr50_35067_c1_97_906 269
10 3300009147 Ga0114129_10095896 Ga0114129_100958962 270
11 3300042132 Ga0450895_000246 Ga0450895_000246_385_1329 271
12 3300042133 Ga0450896_002275 Ga0450896_002275_207_1151 271
13 3300042184 Ga0450908_010077 Ga0450908_010077_505_1449 271
14 3300042531 Ga0450918_005246 Ga0450918_005246_807_1751 271
15 3300031730 Ga0307516_10202474 Ga0307516_102024742 272
16 3300005327 Ga0070658_10000570 Ga0070658_1000057011 273
17 3300005563 Ga0068855_100074989 Ga0068855_1000749892 273
18 3300009147 Ga0114129_10084117 Ga0114129_100841172 273
19 3300010375 Ga0105239_10075093 Ga0105239_100750932 273
20 3300025909 Ga0207705_10004723 Ga0207705_100047238 273
21 3300031903 Ga0307407_10287671 Ga0307407_102876711 273
22 3300047472 Ga0495686_0002891 Ga0495686_0002891_9824_10651 273
23 3300050507 nmdc:mga05p37_21606_c1 nmdc:mga05p37_21606_c1_49_882 273
24 3300053096 Ga0500641_0047458 Ga0500641_0047458_43_1047 273
25 3300009553 Ga0105249_10669289 Ga0105249_106692891 274
26 3300011119 Ga0105246_10002209 Ga0105246_100022098 274
27 3300013296 Ga0157374_10068369 Ga0157374_100683692 274
28 3300013297 Ga0157378_10058629 Ga0157378_100586292 274
29 3300013306 Ga0163162_10067538 Ga0163162_100675382 274
30 3300013308 Ga0157375_10111544 Ga0157375_101115442 274
31 3300042876 Ga0451577_0524719 Ga0451577_0524719_19_990 274
32 3300046460 Ga0495638_0013600 Ga0495638_0013600_1977_2948 274
33 3300049571 Ga0501034_0320607 Ga0501034_0320607_85_966 274
34 3300053139 Ga0500568_0004103 Ga0500568_0004103_1904_2869 274
35 3300005544 Ga0070686_100000833 Ga0070686_10000083313 275
36 3300049568 Ga0501031_0281815 Ga0501031_0281815_61_1041 275
37 3300049578 Ga0501042_0012825 Ga0501042_0012825_4233_5213 275
38 3300049588 Ga0501072_0042286 Ga0501072_0042286_2395_3375 275
39 3300049592 Ga0501076_0029643 Ga0501076_0029643_1282_2262 275
40 3300049742 Ga0501080_0132874 Ga0501080_0132874_604_1584 275
41 3300049743 Ga0501081_0192516 Ga0501081_0192516_386_1330 276
42 3300044712 Ga0453684_0673919 Ga0453684_0673919_32_1012 277
43 3300005333 Ga0070677_10028692 Ga0070677_100286921 278
44 3300005335 Ga0070666_10046535 Ga0070666_100465352 278
45 3300005347 Ga0070668_100086844 Ga0070668_1000868442 278
46 3300005364 Ga0070673_100021237 Ga0070673_1000212373 278
47 3300005367 Ga0070667_100061233 Ga0070667_1000612332 278
48 3300005456 Ga0070678_100132649 Ga0070678_1001326492 278
49 3300005459 Ga0068867_100220439 Ga0068867_1002204392 278
50 3300005466 Ga0070685_10040452 Ga0070685_100404522 278
51 3300005543 Ga0070672_100019706 Ga0070672_1000197064 278
52 3300005844 Ga0068862_100137299 Ga0068862_1001372993 278
53 3300005985 Ga0081539_10027954 Ga0081539_100279542 278
54 3300006237 Ga0097621_100055734 Ga0097621_1000557343 278
55 3300006358 Ga0068871_100030011 Ga0068871_1000300114 278
56 3300006881 Ga0068865_100008161 Ga0068865_1000081615 278
57 3300009551 Ga0105238_10394358 Ga0105238_103943582 278
58 3300025903 Ga0207680_10062203 Ga0207680_100622033 278
59 3300025907 Ga0207645_10001414 Ga0207645_100014149 278
60 3300025938 Ga0207704_10315192 Ga0207704_103151922 278
61 3300025940 Ga0207691_10033492 Ga0207691_100334921 278
62 3300025942 Ga0207689_10099102 Ga0207689_100991023 278
63 3300025986 Ga0207658_10207222 Ga0207658_102072222 278
64 3300026041 Ga0207639_10097028 Ga0207639_100970282 278
65 3300026089 Ga0207648_10003652 Ga0207648_1000365217 278
66 3300026121 Ga0207683_10005960 Ga0207683_100059605 278
67 3300028380 Ga0268265_10099292 Ga0268265_100992922 278
68 3300028381 Ga0268264_10028527 Ga0268264_100285275 278
69 3300050508 nmdc:mga09592_67540_c1 nmdc:mga09592_67540_c1_1782_2729 279
70 3300005563 Ga0068855_100062346 Ga0068855_1000623462 280
71 3300009094 Ga0111539_10417665 Ga0111539_104176652 280
72 3300050511 nmdc:mga08y16_333074_c1 nmdc:mga08y16_333074_c1_387_1340 280
73 3300005548 Ga0070665_100285277 Ga0070665_1002852773 281
74 3300025960 Ga0207651_10133323 Ga0207651_101333232 281
75 3300045051 Ga0451576_0102727 Ga0451576_0102727_138_1091 281
76 3300037471 Ga0395905_0384663 Ga0395905_0384663_136_1086 282
77 3300042131 Ga0450894_001980 Ga0450894_001980_235_1170 283
78 3300005340 Ga0070689_100018548 Ga0070689_1000185483 284
79 3300025936 Ga0207670_10002463 Ga0207670_100024632 284
80 3300045051 Ga0451576_0207128 Ga0451576_0207128_1164_2027 284
81 3300050507 nmdc:mga05p37_341986_c1 nmdc:mga05p37_341986_c1_541_1488 284
82 3300005468 Ga0070707_100554920 Ga0070707_1005549201 285
83 3300009094 Ga0111539_10029897 Ga0111539_100298977 285
84 3300014326 Ga0157380_10000621 Ga0157380_1000062112 285
85 3300027907 Ga0207428_10048474 Ga0207428_100484741 285
86 3300050511 nmdc:mga08y16_15519_c1 nmdc:mga08y16_15519_c1_2094_3041 285
87 3300049590 Ga0501074_0281229 Ga0501074_0281229_63_1043 286
88 3300005518 Ga0070699_100269979 Ga0070699_1002699792 289
89 3300009094 Ga0111539_10186912 Ga0111539_101869122 289
90 3300050511 nmdc:mga08y16_83544_c1 nmdc:mga08y16_83544_c1_406_1347 289
91 iso_pu_bacteria 2687453341 2688390961 289
92 3300005440 Ga0070705_100270116 Ga0070705_1002701161 290
93 3300005444 Ga0070694_100330449 Ga0070694_1003304491 290
94 3300005546 Ga0070696_100024402 Ga0070696_1000244022 290
95 3300005549 Ga0070704_100002933 Ga0070704_1000029334 290
96 3300050489 nmdc:mga03683_105462_c1 nmdc:mga03683_105462_c1_252_1211 290
97 3300005518 Ga0070699_100480740 Ga0070699_1004807401 291
98 3300005549 Ga0070704_100080398 Ga0070704_1000803982 291
99 3300030731 Ga0316177_1117106 Ga0316177_11171062 291
100 3300030742 Ga0316183_1020579 Ga0316183_10205793 291
101 3300030744 Ga0316181_1024402 Ga0316181_10244022 291
102 3300045051 Ga0451576_0252508 Ga0451576_0252508_129_1109 291
103 iso_pu_bacteria 2842903701 2842906991 291
104 3300005468 Ga0070707_100000387 Ga0070707_10000038710 292
105 3300013307 Ga0157372_10100126 Ga0157372_101001262 292
106 3300025922 Ga0207646_10000140 Ga0207646_1000014054 292
107 3300005331 Ga0070670_100133723 Ga0070670_1001337232 293
108 3300005539 Ga0068853_100000004 Ga0068853_100000004331 293
109 3300006844 Ga0075428_100569907 Ga0075428_1005699072 293
110 3300025925 Ga0207650_10057275 Ga0207650_100572752 293
111 3300026041 Ga0207639_10000002 Ga0207639_10000002138 293
112 3300032002 Ga0307416_100162432 Ga0307416_1001624322 293
113 3300059423 Ga0590074_003358 Ga0590074_003358_1263_2186 293
114 3300059424 Ga0590075_001053 Ga0590075_001053_4872_5795 293
115 3300059426 Ga0590077_000606 Ga0590077_000606_4388_5311 293
116 3300005340 Ga0070689_100019776 Ga0070689_1000197762 294
117 3300006880 Ga0075429_100045220 Ga0075429_1000452203 294
118 3300025936 Ga0207670_10016488 Ga0207670_100164882 294
119 3300032002 Ga0307416_100172422 Ga0307416_1001724222 294
120 3300044673 Ga0453683_0023025 Ga0453683_0023025_361_1302 294
121 3300046675 Ga0495657_0136488 Ga0495657_0136488_380_1330 294
122 3300050508 nmdc:mga09592_98102_c1 nmdc:mga09592_98102_c1_1446_2405 294
123 3300042876 Ga0451577_0001371 Ga0451577_0001371_31530_32492 295
124 3300044712 Ga0453684_0004654 Ga0453684_0004654_25214_26176 295
125 3300044712 Ga0453684_0036029 Ga0453684_0036029_658_1602 295
126 3300046683 Ga0495658_0036465 Ga0495658_0036465_50_1003 295
127 3300049741 Ga0501079_0062484 Ga0501079_0062484_1410_2336 295
128 3300053153 Ga0500616_0000226 Ga0500616_0000226_78957_79913 295
129 3300005295 Ga0065707_10196951 Ga0065707_101969512 296
130 3300005445 Ga0070708_100085331 Ga0070708_1000853312 296
131 3300005549 Ga0070704_100482558 Ga0070704_1004825581 296
132 3300006846 Ga0075430_100011163 Ga0075430_1000111636 296
133 3300006852 Ga0075433_10015953 Ga0075433_100159534 296
134 3300006871 Ga0075434_100033098 Ga0075434_1000330982 296
135 3300006871 Ga0075434_100326292 Ga0075434_1003262922 296
136 3300009094 Ga0111539_10411162 Ga0111539_104111622 296
137 3300009147 Ga0114129_10035825 Ga0114129_100358255 296
138 3300025936 Ga0207670_10250102 Ga0207670_102501022 296
139 3300042876 Ga0451577_0021710 Ga0451577_0021710_1762_2688 296
140 3300045051 Ga0451576_0044939 Ga0451576_0044939_70_996 296
141 3300045051 Ga0451576_0265328 Ga0451576_0265328_613_1569 296
142 3300050507 nmdc:mga05p37_28849_c1 nmdc:mga05p37_28849_c1_1080_2051 296
143 3300050507 nmdc:mga05p37_77243_c1 nmdc:mga05p37_77243_c1_1974_2879 296
144 3300050509 nmdc:mga0qj67_6341_c2 nmdc:mga0qj67_6341_c2_4460_5389 296
145 3300050512 nmdc:mga0n895_241040_c1 nmdc:mga0n895_241040_c1_510_1439 296
146 3300050512 nmdc:mga0n895_53186_c1 nmdc:mga0n895_53186_c1_1076_2047 296
147 3300050515 nmdc:mga0a205_5287_c1 nmdc:mga0a205_5287_c1_892_1821 296
148 3300050515 nmdc:mga0a205_657_c1 nmdc:mga0a205_657_c1_23457_24428 296
149 3300005330 Ga0070690_100092865 Ga0070690_1000928652 297
150 3300005331 Ga0070670_100265178 Ga0070670_1002651782 297
151 3300005334 Ga0068869_100075241 Ga0068869_1000752412 297
152 3300005334 Ga0068869_100169773 Ga0068869_1001697731 297
153 3300005338 Ga0068868_100075061 Ga0068868_1000750612 297
154 3300005343 Ga0070687_100004763 Ga0070687_1000047633 297
155 3300005347 Ga0070668_100156824 Ga0070668_1001568241 297
156 3300005356 Ga0070674_100274939 Ga0070674_1002749392 297
157 3300005356 Ga0070674_100335593 Ga0070674_1003355931 297
158 3300005364 Ga0070673_100031863 Ga0070673_1000318632 297
159 3300005365 Ga0070688_100023530 Ga0070688_1000235303 297
160 3300005367 Ga0070667_100007347 Ga0070667_1000073472 297
161 3300005438 Ga0070701_10009788 Ga0070701_100097882 297
162 3300005444 Ga0070694_100088979 Ga0070694_1000889792 297
163 3300005466 Ga0070685_10049621 Ga0070685_100496212 297
164 3300005543 Ga0070672_100045449 Ga0070672_1000454492 297
165 3300005549 Ga0070704_100051732 Ga0070704_1000517323 297
166 3300005615 Ga0070702_100184596 Ga0070702_1001845961 297
167 3300005617 Ga0068859_100022906 Ga0068859_1000229067 297
168 3300005617 Ga0068859_100310490 Ga0068859_1003104902 297
169 3300005718 Ga0068866_10048707 Ga0068866_100487072 297
170 3300005840 Ga0068870_10183041 Ga0068870_101830411 297
171 3300005841 Ga0068863_100204463 Ga0068863_1002044632 297
172 3300005843 Ga0068860_100026447 Ga0068860_1000264475 297
173 3300005985 Ga0081539_10000382 Ga0081539_1000038269 297
174 3300006881 Ga0068865_100013215 Ga0068865_1000132156 297
175 3300006931 Ga0097620_100022906 Ga0097620_1000229062 297
176 3300006931 Ga0097620_100310497 Ga0097620_1003104972 297
177 3300009148 Ga0105243_10007205 Ga0105243_100072054 297
178 3300009176 Ga0105242_10030713 Ga0105242_100307134 297
179 3300009176 Ga0105242_10047359 Ga0105242_100473593 297
180 3300009177 Ga0105248_10007925 Ga0105248_1000792514 297
181 3300009553 Ga0105249_10110290 Ga0105249_101102902 297
182 3300009553 Ga0105249_10298493 Ga0105249_102984931 297
183 3300011119 Ga0105246_10181347 Ga0105246_101813472 297
184 3300013297 Ga0157378_10335096 Ga0157378_103350961 297
185 3300013308 Ga0157375_10338316 Ga0157375_103383162 297
186 3300014745 Ga0157377_10062138 Ga0157377_100621382 297
187 3300014968 Ga0157379_10034685 Ga0157379_100346852 297
188 3300025908 Ga0207643_10090253 Ga0207643_100902532 297
189 3300025910 Ga0207684_10153352 Ga0207684_101533522 297
190 3300025918 Ga0207662_10001679 Ga0207662_100016799 297
191 3300025923 Ga0207681_10101268 Ga0207681_101012682 297
192 3300025926 Ga0207659_10209477 Ga0207659_102094771 297
193 3300025934 Ga0207686_10048634 Ga0207686_100486343 297
194 3300025937 Ga0207669_10008635 Ga0207669_100086356 297
195 3300025940 Ga0207691_10027428 Ga0207691_100274284 297
196 3300025941 Ga0207711_10100585 Ga0207711_101005852 297
197 3300025942 Ga0207689_10007272 Ga0207689_100072727 297
198 3300025942 Ga0207689_10154683 Ga0207689_101546832 297
199 3300025945 Ga0207679_10315164 Ga0207679_103151642 297
200 3300025961 Ga0207712_10357483 Ga0207712_103574831 297
201 3300026035 Ga0207703_10153489 Ga0207703_101534892 297
202 3300026075 Ga0207708_10024402 Ga0207708_100244025 297
203 3300026089 Ga0207648_10006614 Ga0207648_1000661412 297
204 3300026118 Ga0207675_100027011 Ga0207675_1000270114 297
205 3300026121 Ga0207683_10043172 Ga0207683_100431722 297
206 3300028381 Ga0268264_10029695 Ga0268264_100296953 297
207 3300035691 Ga0373931_0206289 Ga0373931_0206289_209_1138 297
208 3300041997 Ga0439431_0009520 Ga0439431_0009520_420_1349 297
209 3300042435 Ga0439434_0006915 Ga0439434_0006915_2096_3025 297
210 3300044673 Ga0453683_0020794 Ga0453683_0020794_683_1615 297
211 3300044712 Ga0453684_0020130 Ga0453684_0020130_2156_3088 297
212 3300046455 Ga0495603_0169478 Ga0495603_0169478_306_1235 297
213 3300049571 Ga0501034_0257329 Ga0501034_0257329_519_1448 297
214 3300049587 Ga0501071_0067188 Ga0501071_0067188_1583_2506 297
215 3300049824 Ga0501045_0204506 Ga0501045_0204506_323_1246 297
216 3300050493 nmdc:mga0k408_36413_c1 nmdc:mga0k408_36413_c1_1328_2284 297
217 3300059424 Ga0590075_011041 Ga0590075_011041_1029_1958 297
218 3300006178 Ga0075367_10034209 Ga0075367_100342092 298
219 3300006195 Ga0075366_10059824 Ga0075366_100598242 298
220 3300037471 Ga0395905_0217387 Ga0395905_0217387_783_1736 298
221 3300049661 Ga0501217_010749 Ga0501217_010749_768_1715 298
222 3300049705 Ga0501225_0006040 Ga0501225_0006040_1687_2634 298
223 3300050493 nmdc:mga0k408_73709_c1 nmdc:mga0k408_73709_c1_199_1209 298
224 3300050494 nmdc:mga06z11_62239_c1 nmdc:mga06z11_62239_c1_552_1562 298
225 3300014325 Ga0163163_10081540 Ga0163163_100815401 299
226 3300025961 Ga0207712_10310756 Ga0207712_103107561 299
227 3300026116 Ga0207674_10040523 Ga0207674_100405232 299
228 3300042876 Ga0451577_0026961 Ga0451577_0026961_924_1889 299
229 3300042876 Ga0451577_0056427 Ga0451577_0056427_2207_3169 299
230 3300044712 Ga0453684_0106231 Ga0453684_0106231_769_1728 299
231 3300049591 Ga0501075_0058346 Ga0501075_0058346_1225_2148 299
232 3300049592 Ga0501076_0052852 Ga0501076_0052852_1102_2025 299
233 3300050493 nmdc:mga0k408_232679_c1 nmdc:mga0k408_232679_c1_13_972 299
234 3300050510 nmdc:mga06r32_5959_c1 nmdc:mga06r32_5959_c1_5877_6812 299
235 3300050512 nmdc:mga0n895_42924_c1 nmdc:mga0n895_42924_c1_996_1931 299
236 3300059421 Ga0590071_000106 Ga0590071_000106_17712_18620 299
237 3300059424 Ga0590075_001225 Ga0590075_001225_3464_4372 299
238 3300059426 Ga0590077_005691 Ga0590077_005691_223_1131 299
239 iso_pu_bacteria 2883068021 2883071978 300
240 iso_pu_bacteria 2896085136 2896089843 300
241 3300005435 Ga0070714_100308012 Ga0070714_1003080122 301
242 3300006178 Ga0075367_10006158 Ga0075367_100061584 301
243 3300050494 nmdc:mga06z11_40089_c1 nmdc:mga06z11_40089_c1_1255_2256 301
244 3300003794 Ga0055531_10000430 Ga0055531_1000043029 308
245 3300025304 Ga0209257_1000006 Ga0209257_1000006517 308

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01261

AP_endonuc_2

Xylose isomerase-like TIM barrel

80

327

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
2qum-assembly1.cif.gz_B crystal structure of d-tagatose 3-epimerase from pseudomonas cichorii with d-tagatose 0.8196 36 308
4xsl-assembly2.cif.gz_C crystal strcutre of d-tagatose 3-epimerase c66s from pseudomonas cichorii in complex with glycerol 0.8067 37 307
6wn6-assembly1.cif.gz_A crystal structure of 3-keto-d-glucoside 4-epimerase, ycjr, from e. coli, apo form 0.8067 35 305
4pgl-assembly2.cif.gz_D crystal structure of engineered d-tagatose 3-epimerase pcdte-ils6 0.8065 36 308
4ovx-assembly1.cif.gz_A crystal structure of xylose isomerase domain protein from planctomyces limnophilus dsm 3776 0.8049 36 308
ID Description Score Start End Superfamily
3wqoA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Divalent-metal-dependent TIM barrel enzymes 0.817 36 307 3.20.20.150
4xslC00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Divalent-metal-dependent TIM barrel enzymes 0.8067 37 307 3.20.20.150
af_Q59009_1_251_3.20.20.150 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Divalent-metal-dependent TIM barrel enzymes 0.8057 36 308 3.20.20.150
3kwsB00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Divalent-metal-dependent TIM barrel enzymes 0.8032 34 307 3.20.20.150
3vylH00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Divalent-metal-dependent TIM barrel enzymes 0.8031 36 307 3.20.20.150
ID Description Score Start End GO Terms
AF-A0A2A4M3Z3-F1-model_v4 Xylose isomerase 0.9965 36 308 GO:0016853
AF-A0A3N5RND7-F1-model_v4 Sugar phosphate isomerase/epimerase 0.9952 66 308 GO:0016853
AF-A0A432FDA0-F1-model_v4 Sugar phosphate isomerase/epimerase 0.9928 90 308 GO:0016853
AF-A0A2A4M3Z3-F1-model_v4 Xylose isomerase 0.9928 36 308 GO:0016853
AF-A0A7C1Y5Z5-F1-model_v4 Sugar phosphate isomerase/epimerase 0.9917 118 308 GO:0016853

Feature Viewer

pLDDT pTM Quality
89.67 0.85 High
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Predicted Structure (AlphaFold2)

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