F357399
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 245 | 168 | 490 | 367 |
Family's Representative Sequence
| Representative Sequence | 3300020082|Ga0206353_11393793|Ga0206353_113937933 |
| Length | 404 |
| Sequence | MDTPAFLPTDTTMRPVSNETSGNPPARARDAVCAPSATDALDVTPIAAVRAHAYRIPTDAPEADGTFEWTSTTLVVVEIDAGGCTGLGYTYTDASAAALINETLAEALLHEHAAAVRALTARLWRRVRNIGRSGLCATAISALDFALWDLNAKLLGVPLVRLLGGVLRAHVPIYGSGGFTSYDDAQLRNQLAHWVDVDGCTAVKMKIGAQPERDPQRVKTAREAIGDAELFVDANGALTVNQALQCAARIADEGVAWFEEPVSSDDLAGLHLVREAAPSSMDIAAGEYAYTSDDFRRMLEAQAVDVLQADATRCGGVTGFMQAAQLCDAWHIPLSAHCAPALHRHLAAAAPRLRHIEWFHDHVRIESMLFDGAPRADRGAIAPDLSRPGCGLDFKRADAKPYAL |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300020082 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 2 | 3300001989 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 | Metagenome | Rhizosphere |
| 3 | 3300002067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 | Metagenome | Rhizosphere |
| 4 | 3300002075 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 | Metagenome | Rhizosphere |
| 5 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 6 | 3300003760 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 | Metagenome | Endosphere |
| 7 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 9 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 10 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 14 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 17 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 18 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005549 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG | Metagenome | Rhizosphere |
| 20 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 21 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 22 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 23 | 3300006871 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Metagenome | Rhizosphere |
| 24 | 3300006942 | Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW | Metagenome | Nodule |
| 25 | 3300006943 | Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW | Metagenome | Nodule |
| 26 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 27 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 28 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 29 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 30 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 31 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 32 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 33 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 34 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 35 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 36 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 37 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 38 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 39 | 3300015262 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG | Metagenome | Rhizosphere |
| 40 | 3300022467 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 41 | 3300025228 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 42 | 3300025256 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) | Metagenome | Unclassified |
| 43 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300025920 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300027357 | Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW (SPAdes) (version 2) | Metagenome | Nodule |
| 57 | 3300027361 | Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) | Metagenome | Nodule |
| 58 | 3300027363 | Root nodule microbial communities of legume samples collected from California, USA - Siratro red BW (SPAdes) (version 2) | Metagenome | Nodule |
| 59 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 61 | 3300035691 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 | Metagenome | Rhizosphere |
| 62 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 63 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 64 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 65 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 66 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 67 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 68 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 69 | 3300042016 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 | Metagenome | Rhizosphere |
| 70 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 71 | 3300044672 | Roots microbial communities from millet plant in semiarid region near Thies, Senegal - COA3E | Metagenome | Unclassified |
| 72 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 73 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 74 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 75 | 3300044706 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R | Metagenome | Rhizosphere |
| 76 | 3300044735 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R | Metagenome | Rhizosphere |
| 77 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 78 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 79 | 3300044901 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R | Metagenome | Rhizosphere |
| 80 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 81 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 82 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 83 | 3300046454 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere | Metagenome | Rhizosphere |
| 84 | 3300046455 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere | Metagenome | Rhizosphere |
| 85 | 3300046459 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere | Metagenome | Rhizosphere |
| 86 | 3300046462 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere | Metagenome | Rhizosphere |
| 87 | 3300046463 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere | Metagenome | Rhizosphere |
| 88 | 3300046471 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere | Metagenome | Rhizosphere |
| 89 | 3300046477 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere | Metagenome | Rhizosphere |
| 90 | 3300046500 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere | Metagenome | Rhizosphere |
| 91 | 3300046501 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere | Metagenome | Rhizosphere |
| 92 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 93 | 3300046511 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere | Metagenome | Rhizosphere |
| 94 | 3300046512 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere | Metagenome | Rhizosphere |
| 95 | 3300046514 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere | Metagenome | Rhizosphere |
| 96 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300046524 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300046531 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300046533 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300046536 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300046642 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300046679 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300046690 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300046809 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300047315 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300047319 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300047323 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300047444 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere | Metagenome | Rhizosphere |
| 111 | 3300047673 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300048088 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300048089 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere | Metagenome | Rhizosphere |
| 114 | 3300048091 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere | Metagenome | Rhizosphere |
| 115 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 116 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 117 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 118 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 119 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 120 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 121 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 122 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 123 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 124 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 125 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 126 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 127 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 128 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 129 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 130 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 131 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 132 | 3300049583 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 | Metagenome | Rhizosphere |
| 133 | 3300049584 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 | Metagenome | Rhizosphere |
| 134 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 135 | 3300049587 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 | Metagenome | Rhizosphere |
| 136 | 3300049741 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 | Metagenome | Rhizosphere |
| 137 | 3300049744 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 | Metagenome | Rhizosphere |
| 138 | 3300059426 | Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 | Metagenome | Rhizosphere |
| 139 | 3300059508 | Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 53R_CD_T2_R1 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 140 | 3300059512 | Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 57R_AW_T2_R1 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 141 | 3300059639 | Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 3R_CW_T1_R3 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 142 | 3300059640 | Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 8R_CD_T1_R4 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 143 | 3300059643 | Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 13R_AD_T1_R1 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 144 | 3300059645 | Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 18R_SW_T1_R1 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 145 | 3300060346 | Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 169R_CW_T3_R4 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 146 | 3300061719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 | Metagenome | Rhizosphere |
| 147 | 2515154123 | Trinickia symbiotica JPY347 | Isolate | Nodule |
| 148 | 2728368998 | Bradyrhizobium macuxiense BR 10303 | Isolate | Nodule |
| 149 | 2816332253 | Burkholderia vietnamiensis HI2297 | Isolate | Unclassified |
| 150 | 2816332256 | Burkholderia vietnamiensis MSMB608WGS | Isolate | Unclassified |
| 151 | 2816332286 | Burkholderia vietnamiensis HI2221 | Isolate | Rhizosphere |
| 152 | 2863421361 | Burkholderia cenocepacia CACua-24 | Isolate | Rhizosphere |
| 153 | 2900634093 | Paraburkholderia dipogonis ICMP 19430 | Isolate | Unclassified |
| 154 | 2904564687 | Burkholderia sp. 571 | Isolate | Unclassified |
| 155 | 2904571731 | Burkholderia cenocepacia 574 | Isolate | Unclassified |
| 156 | 2928163908 | Burkholderia sp. 567 | Isolate | Unclassified |
| 157 | 2928536128 | Burkholderia sola 565 | Isolate | Unclassified |
| 158 | 2945934425 | Paraburkholderia graminis W1I13 | Isolate | Rhizosphere |
| 159 | 2990703756 | Paraburkholderia graminis SLBN-33 | Isolate | Rhizosphere |
| 160 | 641736151 | Paraburkholderia graminis C4D1M | Isolate | Rhizoplane |
| 161 | 642555113 | Paraburkholderia phytofirmans PsJN | Isolate | Unclassified |
| 162 | 8020807995 | Burkholderia sp. B10 | Isolate | Rhizosphere |
| 163 | 8020938398 | Burkholderia sp. BE12 | Isolate | Rhizosphere |
| 164 | 8020953355 | Burkholderia sp. BE24 | Isolate | Rhizosphere |
| 165 | 8039098773 | Burkholderia multivorans MSMB612WGS | Isolate | Unclassified |
| 166 | 8040173305 | Burkholderia vietnamiensis BE10 | Isolate | Rhizosphere |
| 167 | 8053945823 | Actinomadura terrae OS3-83 | Isolate | Rhizosphere |
| 168 | 8057132660 | Paracoccus rhizosphaerae LMG 21293 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 87.35 |
| Metatranscriptomes | 3.67 |
| Isolates | 8.98 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 0.82 |
| Nodule | 2.86 |
| Rhizoplane | 6.94 |
| Rhizosphere | 81.22 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0.41 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0206353_11393793 | 3300020082 | Bacteria | 5873 |
| 2 | JGI24739J22299_10026986 | 3300001989 | Bacteria | 2010 |
| 3 | JGI24735J21928_10021843 | 3300002067 | Bacteria | 1951 |
| 4 | JGI24738J21930_10004880 | 3300002075 | Bacteria | 3255 |
| 5 | rootH1_10243873 | 3300003323 | Bacteria | 2237 |
| 6 | Ga0055527_1004739 | 3300003760 | Bacteria | 1835 |
| 7 | Ga0070658_10008812 | 3300005327 | Bacteria | 8109 |
| 8 | Ga0070658_10011188 | 3300005327 | Bacteria | 7191 |
| 9 | Ga0070658_10142287 | 3300005327 | Bacteria | 2004 |
| 10 | Ga0070683_100002621 | 3300005329 | Bacteria | 14385 |
| 11 | Ga0070680_100025404 | 3300005336 | Bacteria | 4735 |
| 12 | Ga0070680_100027882 | 3300005336 | Bacteria | 4526 |
| 13 | Ga0070660_100000029 | 3300005339 | Bacteria | 88220 |
| 14 | Ga0070660_100022856 | 3300005339 | Bacteria | 4630 |
| 15 | Ga0070659_100000006 | 3300005366 | Bacteria | 229954 |
| 16 | Ga0070659_100002982 | 3300005366 | Bacteria | 12055 |
| 17 | Ga0070659_100055386 | 3300005366 | Bacteria | 3125 |
| 18 | Ga0070714_100017980 | 3300005435 | Bacteria | 5733 |
| 19 | Ga0070713_100010074 | 3300005436 | Bacteria | 6815 |
| 20 | Ga0070663_100014040 | 3300005455 | Bacteria | 5131 |
| 21 | Ga0070662_100156880 | 3300005457 | Bacteria | 1777 |
| 22 | Ga0070681_10010181 | 3300005458 | Bacteria | 9274 |
| 23 | Ga0070679_100017930 | 3300005530 | Bacteria | 6859 |
| 24 | Ga0070665_100006851 | 3300005548 | Bacteria | 11583 |
| 25 | Ga0070704_100021536 | 3300005549 | Bacteria | 4182 |
| 26 | Ga0068855_100005322 | 3300005563 | Bacteria | 15722 |
| 27 | Ga0068855_100006418 | 3300005563 | Bacteria | 14316 |
| 28 | Ga0068855_100021040 | 3300005563 | Bacteria | 7823 |
| 29 | Ga0070664_100069020 | 3300005564 | Bacteria | 3023 |
| 30 | Ga0068857_100104490 | 3300005577 | Bacteria | 2543 |
| 31 | Ga0075434_100113141 | 3300006871 | Bacteria | 2726 |
| 32 | Ga0099824_1006316 | 3300006942 | Bacteria | 16320 |
| 33 | Ga0099822_1023264 | 3300006943 | Bacteria | 5725 |
| 34 | Ga0105240_10006576 | 3300009093 | Bacteria | 17064 |
| 35 | Ga0105240_10045670 | 3300009093 | Bacteria | 5556 |
| 36 | Ga0105240_10067883 | 3300009093 | Bacteria | 4418 |
| 37 | Ga0105241_10209562 | 3300009174 | Bacteria | 1632 |
| 38 | Ga0105248_10007978 | 3300009177 | Bacteria | 11633 |
| 39 | Ga0105248_10345182 | 3300009177 | Bacteria | 1676 |
| 40 | Ga0105238_10052363 | 3300009551 | Bacteria | 4103 |
| 41 | Ga0105238_10147148 | 3300009551 | Bacteria | 2332 |
| 42 | Ga0105239_10003913 | 3300010375 | Bacteria | 18041 |
| 43 | Ga0157373_10133303 | 3300013100 | Bacteria | 1747 |
| 44 | Ga0157371_10026632 | 3300013102 | Bacteria | 4201 |
| 45 | Ga0157371_10035314 | 3300013102 | Bacteria | 3582 |
| 46 | Ga0157370_10000823 | 3300013104 | Bacteria | 39235 |
| 47 | Ga0157370_10015137 | 3300013104 | Bacteria | 7856 |
| 48 | Ga0157369_10000145 | 3300013105 | Bacteria | 100895 |
| 49 | Ga0157369_10000293 | 3300013105 | Bacteria | 66670 |
| 50 | Ga0157369_10041818 | 3300013105 | Bacteria | 5001 |
| 51 | Ga0157374_10000541 | 3300013296 | Bacteria | 33755 |
| 52 | Ga0157378_10000161 | 3300013297 | Bacteria | 63839 |
| 53 | Ga0157372_10003496 | 3300013307 | Bacteria | 16931 |
| 54 | Ga0157372_10308245 | 3300013307 | Bacteria | 1842 |
| 55 | Ga0157376_10022197 | 3300014969 | Bacteria | 4943 |
| 56 | Ga0182007_10001975 | 3300015262 | Bacteria | 10581 |
| 57 | Ga0224712_10000009 | 3300022467 | Bacteria | 28893 |
| 58 | Ga0209672_100284 | 3300025228 | Bacteria | 36000 |
| 59 | Ga0209759_1009560 | 3300025256 | Bacteria | 2922 |
| 60 | Ga0207647_10014074 | 3300025904 | Bacteria | 5529 |
| 61 | Ga0207705_10006161 | 3300025909 | Bacteria | 8919 |
| 62 | Ga0207705_10237047 | 3300025909 | Bacteria | 1389 |
| 63 | Ga0207707_10004566 | 3300025912 | Bacteria | 12169 |
| 64 | Ga0207707_10095496 | 3300025912 | Unclassified | 2598 |
| 65 | Ga0207695_10103213 | 3300025913 | Bacteria | 2843 |
| 66 | Ga0207660_10022641 | 3300025917 | Bacteria | 4234 |
| 67 | Ga0207660_10040866 | 3300025917 | Bacteria | 3248 |
| 68 | Ga0207657_10000072 | 3300025919 | Bacteria | 93655 |
| 69 | Ga0207657_10012617 | 3300025919 | Bacteria | 8329 |
| 70 | Ga0207649_10022382 | 3300025920 | Bacteria | 3650 |
| 71 | Ga0207700_10011858 | 3300025928 | Bacteria | 5584 |
| 72 | Ga0207690_10000019 | 3300025932 | Bacteria | 235380 |
| 73 | Ga0207690_10014907 | 3300025932 | Bacteria | 4705 |
| 74 | Ga0207690_10120345 | 3300025932 | Bacteria | 1906 |
| 75 | Ga0207661_10050784 | 3300025944 | Bacteria | 3306 |
| 76 | Ga0207679_10023623 | 3300025945 | Bacteria | 4206 |
| 77 | Ga0207679_10093050 | 3300025945 | Bacteria | 2337 |
| 78 | Ga0207667_10005567 | 3300025949 | Bacteria | 15372 |
| 79 | Ga0207667_10021214 | 3300025949 | Bacteria | 7201 |
| 80 | Ga0207667_10027372 | 3300025949 | Bacteria | 6206 |
| 81 | Ga0207667_10311561 | 3300025949 | Bacteria | 1608 |
| 82 | Ga0207678_10000659 | 3300026067 | Bacteria | 31738 |
| 83 | Ga0209589_1000002 | 3300027357 | Bacteria | 708598 |
| 84 | Ga0209489_100002 | 3300027361 | Bacteria | 708609 |
| 85 | Ga0209700_100002 | 3300027363 | Bacteria | 708598 |
| 86 | Ga0268266_10001613 | 3300028379 | Bacteria | 26315 |
| 87 | Ga0265338_10005058 | 3300028800 | Bacteria | 17399 |
| 88 | Ga0373931_0060349 | 3300035691 | Bacteria | 2041 |
| 89 | Ga0395899_0000005 | 3300037312 | Bacteria | 772966 |
| 90 | Ga0395899_0001243 | 3300037312 | Bacteria | 22144 |
| 91 | Ga0395899_0008797 | 3300037312 | Bacteria | 7768 |
| 92 | Ga0395899_0009802 | 3300037312 | Bacteria | 7350 |
| 93 | Ga0395900_0000003 | 3300037418 | Bacteria | 587648 |
| 94 | Ga0395900_0000053 | 3300037418 | Bacteria | 221135 |
| 95 | Ga0395900_0061700 | 3300037418 | Bacteria | 3854 |
| 96 | Ga0395900_0186822 | 3300037418 | Bacteria | 2103 |
| 97 | Ga0395898_0000003 | 3300037466 | Bacteria | 772986 |
| 98 | Ga0395898_0001275 | 3300037466 | Bacteria | 37117 |
| 99 | Ga0395898_0002738 | 3300037466 | Bacteria | 20333 |
| 100 | Ga0395898_0020884 | 3300037466 | Bacteria | 6645 |
| 101 | Ga0395898_0038158 | 3300037466 | Bacteria | 4763 |
| 102 | Ga0395898_0067880 | 3300037466 | Bacteria | 3452 |
| 103 | Ga0395898_0113896 | 3300037466 | Bacteria | 2591 |
| 104 | Ga0395905_0000065 | 3300037471 | Bacteria | 184928 |
| 105 | Ga0395905_0000683 | 3300037471 | Bacteria | 44990 |
| 106 | Ga0395905_0083498 | 3300037471 | Bacteria | 2992 |
| 107 | Ga0395905_0252422 | 3300037471 | Bacteria | 1648 |
| 108 | Ga0436364_1323076 | 3300037853 | Bacteria | 8828 |
| 109 | Ga0395901_0000004 | 3300038443 | Bacteria | 657361 |
| 110 | Ga0395901_0000042 | 3300038443 | Bacteria | 201819 |
| 111 | Ga0395901_0000207 | 3300038443 | Bacteria | 73896 |
| 112 | Ga0395901_0012124 | 3300038443 | Bacteria | 8743 |
| 113 | Ga0395901_0044734 | 3300038443 | Bacteria | 4591 |
| 114 | Ga0436365_0072519 | 3300039437 | Bacteria | 5313 |
| 115 | Ga0439463_017737 | 3300042016 | Bacteria | 1768 |
| 116 | Ga0466969_0000815 | 3300044656 | Bacteria | 16942 |
| 117 | Ga0466969_0009363 | 3300044656 | Bacteria | 5191 |
| 118 | Ga0466969_0052145 | 3300044656 | Bacteria | 2010 |
| 119 | Ga0466982_0073505 | 3300044672 | Bacteria | 2112 |
| 120 | Ga0466965_0005635 | 3300044683 | Bacteria | 5653 |
| 121 | Ga0466965_0015769 | 3300044683 | Bacteria | 3591 |
| 122 | Ga0466966_0000029 | 3300044684 | Bacteria | 104527 |
| 123 | Ga0466966_0011593 | 3300044684 | Bacteria | 5842 |
| 124 | Ga0466966_0014062 | 3300044684 | Bacteria | 5298 |
| 125 | Ga0466966_0120539 | 3300044684 | Bacteria | 1611 |
| 126 | Ga0466961_0000257 | 3300044693 | Bacteria | 35752 |
| 127 | Ga0466961_0000569 | 3300044693 | Bacteria | 23452 |
| 128 | Ga0466961_0001540 | 3300044693 | Bacteria | 14254 |
| 129 | Ga0466961_0011898 | 3300044693 | Bacteria | 5561 |
| 130 | Ga0466961_0025317 | 3300044693 | Bacteria | 3816 |
| 131 | Ga0466964_0008649 | 3300044706 | Bacteria | 3828 |
| 132 | Ga0466964_0067177 | 3300044706 | Bacteria | 1506 |
| 133 | Ga0466968_0010541 | 3300044735 | Bacteria | 3586 |
| 134 | Ga0466968_0046519 | 3300044735 | Bacteria | 1843 |
| 135 | Ga0466970_0006887 | 3300044765 | Bacteria | 5691 |
| 136 | Ga0466957_0000393 | 3300044842 | Bacteria | 21347 |
| 137 | Ga0466957_0003428 | 3300044842 | Bacteria | 8705 |
| 138 | Ga0466957_0030518 | 3300044842 | Bacteria | 3218 |
| 139 | Ga0466957_0040378 | 3300044842 | Bacteria | 2818 |
| 140 | Ga0466957_0041665 | 3300044842 | Bacteria | 2777 |
| 141 | Ga0466960_0001616 | 3300044901 | Bacteria | 8244 |
| 142 | Ga0466959_0013602 | 3300045049 | Bacteria | 5901 |
| 143 | Ga0466958_0000649 | 3300045836 | Bacteria | 14998 |
| 144 | Ga0466958_0014152 | 3300045836 | Bacteria | 4553 |
| 145 | Ga0466958_0025896 | 3300045836 | Bacteria | 3462 |
| 146 | Ga0466958_0124971 | 3300045836 | Bacteria | 1612 |
| 147 | Ga0466967_0226753 | 3300045976 | Bacteria | 1778 |
| 148 | Ga0495592_0025499 | 3300046454 | Bacteria | 4487 |
| 149 | Ga0495603_0008366 | 3300046455 | Bacteria | 6253 |
| 150 | Ga0495629_0000646 | 3300046459 | Bacteria | 28146 |
| 151 | Ga0495651_0019772 | 3300046462 | Bacteria | 5221 |
| 152 | Ga0495653_0018831 | 3300046463 | Bacteria | 5601 |
| 153 | Ga0495650_0000600 | 3300046471 | Bacteria | 49470 |
| 154 | Ga0495650_0003208 | 3300046471 | Bacteria | 12163 |
| 155 | Ga0495650_0027829 | 3300046471 | Bacteria | 2605 |
| 156 | Ga0495664_0008434 | 3300046477 | Bacteria | 5750 |
| 157 | Ga0495596_0011347 | 3300046500 | Bacteria | 3847 |
| 158 | Ga0495607_0125255 | 3300046501 | Bacteria | 1344 |
| 159 | Ga0495606_0035901 | 3300046507 | Bacteria | 3384 |
| 160 | Ga0495608_0115323 | 3300046511 | Bacteria | 1725 |
| 161 | Ga0495610_0000281 | 3300046512 | Bacteria | 53046 |
| 162 | Ga0495618_0125535 | 3300046514 | Bacteria | 1643 |
| 163 | Ga0495628_0230243 | 3300046516 | Bacteria | 1389 |
| 164 | Ga0495648_0018064 | 3300046524 | Bacteria | 5014 |
| 165 | Ga0495665_0023761 | 3300046531 | Bacteria | 3293 |
| 166 | Ga0495640_0018190 | 3300046533 | Bacteria | 5221 |
| 167 | Ga0495587_0033483 | 3300046536 | Bacteria | 3102 |
| 168 | Ga0495634_0009117 | 3300046642 | Bacteria | 7331 |
| 169 | Ga0495623_0004592 | 3300046679 | Bacteria | 9075 |
| 170 | Ga0495623_0106136 | 3300046679 | Bacteria | 1706 |
| 171 | Ga0495624_0018324 | 3300046690 | Bacteria | 4683 |
| 172 | Ga0495600_0141239 | 3300046809 | Bacteria | 1562 |
| 173 | Ga0495581_0092417 | 3300047315 | Bacteria | 1756 |
| 174 | Ga0495604_0003488 | 3300047317 | Bacteria | 12538 |
| 175 | Ga0495674_0003561 | 3300047319 | Bacteria | 15142 |
| 176 | Ga0495680_0017425 | 3300047322 | Bacteria | 6135 |
| 177 | Ga0495683_0050243 | 3300047323 | Bacteria | 2087 |
| 178 | Ga0495675_0013922 | 3300047444 | Bacteria | 5087 |
| 179 | Ga0495593_0080887 | 3300047673 | Bacteria | 1680 |
| 180 | Ga0495602_0031498 | 3300048088 | Bacteria | 5013 |
| 181 | Ga0495614_0006406 | 3300048089 | Bacteria | 5284 |
| 182 | Ga0495614_0039024 | 3300048089 | Bacteria | 2038 |
| 183 | Ga0495626_0022552 | 3300048091 | Bacteria | 3107 |
| 184 | Ga0496101_0073735 | 3300048904 | Bacteria | 2508 |
| 185 | Ga0496101_0196235 | 3300048904 | Bacteria | 1559 |
| 186 | Ga0496104_0019243 | 3300048907 | Bacteria | 6243 |
| 187 | Ga0496104_0259893 | 3300048907 | Bacteria | 1649 |
| 188 | Ga0496105_0088563 | 3300048908 | Bacteria | 2557 |
| 189 | Ga0496105_0145258 | 3300048908 | Bacteria | 1951 |
| 190 | Ga0496106_0045291 | 3300048909 | Bacteria | 3304 |
| 191 | Ga0496108_0018541 | 3300048911 | Bacteria | 5699 |
| 192 | Ga0496109_0009535 | 3300048912 | Bacteria | 8274 |
| 193 | Ga0496110_0003896 | 3300048913 | Bacteria | 11481 |
| 194 | Ga0496111_0006591 | 3300048914 | Bacteria | 7552 |
| 195 | Ga0496112_0026575 | 3300048915 | Bacteria | 5573 |
| 196 | Ga0496113_0036823 | 3300048916 | Bacteria | 3587 |
| 197 | Ga0496113_0038815 | 3300048916 | Bacteria | 3502 |
| 198 | Ga0496114_0036949 | 3300048917 | Bacteria | 4038 |
| 199 | Ga0496114_0267512 | 3300048917 | Bacteria | 1506 |
| 200 | Ga0496116_0027698 | 3300048919 | Bacteria | 4119 |
| 201 | Ga0496117_0027398 | 3300048920 | Bacteria | 4442 |
| 202 | Ga0496117_0066474 | 3300048920 | Bacteria | 2445 |
| 203 | Ga0496118_0013852 | 3300048921 | Bacteria | 7591 |
| 204 | Ga0496121_0003301 | 3300048924 | Bacteria | 23163 |
| 205 | Ga0496125_0011828 | 3300048928 | Bacteria | 8698 |
| 206 | Ga0501047_0036899 | 3300049581 | Bacteria | 4724 |
| 207 | Ga0501067_0001517 | 3300049583 | Bacteria | 12639 |
| 208 | Ga0501068_0001810 | 3300049584 | Bacteria | 11358 |
| 209 | Ga0501070_0113891 | 3300049586 | Bacteria | 2234 |
| 210 | Ga0501071_0013691 | 3300049587 | Bacteria | 5533 |
| 211 | Ga0501079_0126792 | 3300049741 | Bacteria | 1986 |
| 212 | Ga0501083_0053161 | 3300049744 | Bacteria | 2719 |
| 213 | Ga0590077_021438 | 3300059426 | Bacteria | 1376 |
| 214 | Ga0587088_002229 | 3300059508 | Bacteria | 2169 |
| 215 | Ga0587092_001067 | 3300059512 | Bacteria | 2542 |
| 216 | Ga0587062_000220 | 3300059639 | Bacteria | 3479 |
| 217 | Ga0587067_000661 | 3300059640 | Bacteria | 3208 |
| 218 | Ga0587072_000084 | 3300059643 | Bacteria | 7145 |
| 219 | Ga0587076_000197 | 3300059645 | Bacteria | 4183 |
| 220 | Ga0587111_0000089 | 3300060346 | Bacteria | 5791 |
| 221 | Ga0466962_0001857 | 3300061719 | Bacteria | 9929 |
| 222 | Ga0466962_0002213 | 3300061719 | Bacteria | 9191 |
| 223 | Ga0466962_0012250 | 3300061719 | Bacteria | 4122 |
| 224 | 2515689666 | 2515154123 | Bacteria | 6387382 |
| 225 | 2728750696 | 2728368998 | Bacteria | 8720350 |
| 226 | 2817262957 | 2816332253 | Bacteria | 6764532 |
| 227 | 2817276417 | 2816332256 | Bacteria | 6891714 |
| 228 | 2817453846 | 2816332286 | Bacteria | 6853759 |
| 229 | 2863423110 | 2863421361 | Bacteria | 7300805 |
| 230 | 2900639860 | 2900634093 | Bacteria | 10263517 |
| 231 | 2904566955 | 2904564687 | Bacteria | 7609577 |
| 232 | 2904574101 | 2904571731 | Bacteria | 7608790 |
| 233 | 2928166708 | 2928163908 | Bacteria | 7561269 |
| 234 | 2928541213 | 2928536128 | Bacteria | 7657547 |
| 235 | 2945940108 | 2945934425 | Bacteria | 7444609 |
| 236 | 2990707230 | 2990703756 | Bacteria | 7715990 |
| 237 | 642424186 | 641736151 | Bacteria | 7477263 |
| 238 | 642617430 | 642555113 | Bacteria | 8214658 |
| 239 | 8020808002 | 8020807995 | Bacteria | 6801506 |
| 240 | 8020941341 | 8020938398 | Bacteria | 7472757 |
| 241 | 8020956678 | 8020953355 | Bacteria | 7439080 |
| 242 | 8039098992 | 8039098773 | Bacteria | 6602928 |
| 243 | 8040174230 | 8040173305 | Bacteria | 6827067 |
| 244 | 8053949256 | 8053945823 | Bacteria | 8962862 |
| 245 | 8057136526 | 8057132660 | Bacteria | 4061191 |
| 246 | Ga0206353_11393793 | |||
| 247 | JGI24739J22299_10026986 | |||
| 248 | JGI24735J21928_10021843 | |||
| 249 | JGI24738J21930_10004880 | |||
| 250 | rootH1_10243873 | |||
| 251 | Ga0055527_1004739 | |||
| 252 | Ga0070658_10008812 | |||
| 253 | Ga0070658_10011188 | |||
| 254 | Ga0070658_10142287 | |||
| 255 | Ga0070683_100002621 | |||
| 256 | Ga0070680_100025404 | |||
| 257 | Ga0070680_100027882 | |||
| 258 | Ga0070660_100000029 | |||
| 259 | Ga0070660_100022856 | |||
| 260 | Ga0070659_100000006 | |||
| 261 | Ga0070659_100002982 | |||
| 262 | Ga0070659_100055386 | |||
| 263 | Ga0070714_100017980 | |||
| 264 | Ga0070713_100010074 | |||
| 265 | Ga0070663_100014040 | |||
| 266 | Ga0070662_100156880 | |||
| 267 | Ga0070681_10010181 | |||
| 268 | Ga0070679_100017930 | |||
| 269 | Ga0070665_100006851 | |||
| 270 | Ga0070704_100021536 | |||
| 271 | Ga0068855_100005322 | |||
| 272 | Ga0068855_100006418 | |||
| 273 | Ga0068855_100021040 | |||
| 274 | Ga0070664_100069020 | |||
| 275 | Ga0068857_100104490 | |||
| 276 | Ga0075434_100113141 | |||
| 277 | Ga0099824_1006316 | |||
| 278 | Ga0099822_1023264 | |||
| 279 | Ga0105240_10006576 | |||
| 280 | Ga0105240_10045670 | |||
| 281 | Ga0105240_10067883 | |||
| 282 | Ga0105241_10209562 | |||
| 283 | Ga0105248_10007978 | |||
| 284 | Ga0105248_10345182 | |||
| 285 | Ga0105238_10052363 | |||
| 286 | Ga0105238_10147148 | |||
| 287 | Ga0105239_10003913 | |||
| 288 | Ga0157373_10133303 | |||
| 289 | Ga0157371_10026632 | |||
| 290 | Ga0157371_10035314 | |||
| 291 | Ga0157370_10000823 | |||
| 292 | Ga0157370_10015137 | |||
| 293 | Ga0157369_10000145 | |||
| 294 | Ga0157369_10000293 | |||
| 295 | Ga0157369_10041818 | |||
| 296 | Ga0157374_10000541 | |||
| 297 | Ga0157378_10000161 | |||
| 298 | Ga0157372_10003496 | |||
| 299 | Ga0157372_10308245 | |||
| 300 | Ga0157376_10022197 | |||
| 301 | Ga0182007_10001975 | |||
| 302 | Ga0224712_10000009 | |||
| 303 | Ga0209672_100284 | |||
| 304 | Ga0209759_1009560 | |||
| 305 | Ga0207647_10014074 | |||
| 306 | Ga0207705_10006161 | |||
| 307 | Ga0207705_10237047 | |||
| 308 | Ga0207707_10004566 | |||
| 309 | Ga0207707_10095496 | |||
| 310 | Ga0207695_10103213 | |||
| 311 | Ga0207660_10022641 | |||
| 312 | Ga0207660_10040866 | |||
| 313 | Ga0207657_10000072 | |||
| 314 | Ga0207657_10012617 | |||
| 315 | Ga0207649_10022382 | |||
| 316 | Ga0207700_10011858 | |||
| 317 | Ga0207690_10000019 | |||
| 318 | Ga0207690_10014907 | |||
| 319 | Ga0207690_10120345 | |||
| 320 | Ga0207661_10050784 | |||
| 321 | Ga0207679_10023623 | |||
| 322 | Ga0207679_10093050 | |||
| 323 | Ga0207667_10005567 | |||
| 324 | Ga0207667_10021214 | |||
| 325 | Ga0207667_10027372 | |||
| 326 | Ga0207667_10311561 | |||
| 327 | Ga0207678_10000659 | |||
| 328 | Ga0209589_1000002 | |||
| 329 | Ga0209489_100002 | |||
| 330 | Ga0209700_100002 | |||
| 331 | Ga0268266_10001613 | |||
| 332 | Ga0265338_10005058 | |||
| 333 | Ga0373931_0060349 | |||
| 334 | Ga0395899_0000005 | |||
| 335 | Ga0395899_0001243 | |||
| 336 | Ga0395899_0008797 | |||
| 337 | Ga0395899_0009802 | |||
| 338 | Ga0395900_0000003 | |||
| 339 | Ga0395900_0000053 | |||
| 340 | Ga0395900_0061700 | |||
| 341 | Ga0395900_0186822 | |||
| 342 | Ga0395898_0000003 | |||
| 343 | Ga0395898_0001275 | |||
| 344 | Ga0395898_0002738 | |||
| 345 | Ga0395898_0020884 | |||
| 346 | Ga0395898_0038158 | |||
| 347 | Ga0395898_0067880 | |||
| 348 | Ga0395898_0113896 | |||
| 349 | Ga0395905_0000065 | |||
| 350 | Ga0395905_0000683 | |||
| 351 | Ga0395905_0083498 | |||
| 352 | Ga0395905_0252422 | |||
| 353 | Ga0436364_1323076 | |||
| 354 | Ga0395901_0000004 | |||
| 355 | Ga0395901_0000042 | |||
| 356 | Ga0395901_0000207 | |||
| 357 | Ga0395901_0012124 | |||
| 358 | Ga0395901_0044734 | |||
| 359 | Ga0436365_0072519 | |||
| 360 | Ga0439463_017737 | |||
| 361 | Ga0466969_0000815 | |||
| 362 | Ga0466969_0009363 | |||
| 363 | Ga0466969_0052145 | |||
| 364 | Ga0466982_0073505 | |||
| 365 | Ga0466965_0005635 | |||
| 366 | Ga0466965_0015769 | |||
| 367 | Ga0466966_0000029 | |||
| 368 | Ga0466966_0011593 | |||
| 369 | Ga0466966_0014062 | |||
| 370 | Ga0466966_0120539 | |||
| 371 | Ga0466961_0000257 | |||
| 372 | Ga0466961_0000569 | |||
| 373 | Ga0466961_0001540 | |||
| 374 | Ga0466961_0011898 | |||
| 375 | Ga0466961_0025317 | |||
| 376 | Ga0466964_0008649 | |||
| 377 | Ga0466964_0067177 | |||
| 378 | Ga0466968_0010541 | |||
| 379 | Ga0466968_0046519 | |||
| 380 | Ga0466970_0006887 | |||
| 381 | Ga0466957_0000393 | |||
| 382 | Ga0466957_0003428 | |||
| 383 | Ga0466957_0030518 | |||
| 384 | Ga0466957_0040378 | |||
| 385 | Ga0466957_0041665 | |||
| 386 | Ga0466960_0001616 | |||
| 387 | Ga0466959_0013602 | |||
| 388 | Ga0466958_0000649 | |||
| 389 | Ga0466958_0014152 | |||
| 390 | Ga0466958_0025896 | |||
| 391 | Ga0466958_0124971 | |||
| 392 | Ga0466967_0226753 | |||
| 393 | Ga0495592_0025499 | |||
| 394 | Ga0495603_0008366 | |||
| 395 | Ga0495629_0000646 | |||
| 396 | Ga0495651_0019772 | |||
| 397 | Ga0495653_0018831 | |||
| 398 | Ga0495650_0000600 | |||
| 399 | Ga0495650_0003208 | |||
| 400 | Ga0495650_0027829 | |||
| 401 | Ga0495664_0008434 | |||
| 402 | Ga0495596_0011347 | |||
| 403 | Ga0495607_0125255 | |||
| 404 | Ga0495606_0035901 | |||
| 405 | Ga0495608_0115323 | |||
| 406 | Ga0495610_0000281 | |||
| 407 | Ga0495618_0125535 | |||
| 408 | Ga0495628_0230243 | |||
| 409 | Ga0495648_0018064 | |||
| 410 | Ga0495665_0023761 | |||
| 411 | Ga0495640_0018190 | |||
| 412 | Ga0495587_0033483 | |||
| 413 | Ga0495634_0009117 | |||
| 414 | Ga0495623_0004592 | |||
| 415 | Ga0495623_0106136 | |||
| 416 | Ga0495624_0018324 | |||
| 417 | Ga0495600_0141239 | |||
| 418 | Ga0495581_0092417 | |||
| 419 | Ga0495604_0003488 | |||
| 420 | Ga0495674_0003561 | |||
| 421 | Ga0495680_0017425 | |||
| 422 | Ga0495683_0050243 | |||
| 423 | Ga0495675_0013922 | |||
| 424 | Ga0495593_0080887 | |||
| 425 | Ga0495602_0031498 | |||
| 426 | Ga0495614_0006406 | |||
| 427 | Ga0495614_0039024 | |||
| 428 | Ga0495626_0022552 | |||
| 429 | Ga0496101_0073735 | |||
| 430 | Ga0496101_0196235 | |||
| 431 | Ga0496104_0019243 | |||
| 432 | Ga0496104_0259893 | |||
| 433 | Ga0496105_0088563 | |||
| 434 | Ga0496105_0145258 | |||
| 435 | Ga0496106_0045291 | |||
| 436 | Ga0496108_0018541 | |||
| 437 | Ga0496109_0009535 | |||
| 438 | Ga0496110_0003896 | |||
| 439 | Ga0496111_0006591 | |||
| 440 | Ga0496112_0026575 | |||
| 441 | Ga0496113_0036823 | |||
| 442 | Ga0496113_0038815 | |||
| 443 | Ga0496114_0036949 | |||
| 444 | Ga0496114_0267512 | |||
| 445 | Ga0496116_0027698 | |||
| 446 | Ga0496117_0027398 | |||
| 447 | Ga0496117_0066474 | |||
| 448 | Ga0496118_0013852 | |||
| 449 | Ga0496121_0003301 | |||
| 450 | Ga0496125_0011828 | |||
| 451 | Ga0501047_0036899 | |||
| 452 | Ga0501067_0001517 | |||
| 453 | Ga0501068_0001810 | |||
| 454 | Ga0501070_0113891 | |||
| 455 | Ga0501071_0013691 | |||
| 456 | Ga0501079_0126792 | |||
| 457 | Ga0501083_0053161 | |||
| 458 | Ga0590077_021438 | |||
| 459 | Ga0587088_002229 | |||
| 460 | Ga0587092_001067 | |||
| 461 | Ga0587062_000220 | |||
| 462 | Ga0587067_000661 | |||
| 463 | Ga0587072_000084 | |||
| 464 | Ga0587076_000197 | |||
| 465 | Ga0587111_0000089 | |||
| 466 | Ga0466962_0001857 | |||
| 467 | Ga0466962_0002213 | |||
| 468 | Ga0466962_0012250 | |||
| 469 | 2515689666 | |||
| 470 | 2728750696 | |||
| 471 | 2817262957 | |||
| 472 | 2817276417 | |||
| 473 | 2817453846 | |||
| 474 | 2863423110 | |||
| 475 | 2900639860 | |||
| 476 | 2904566955 | |||
| 477 | 2904574101 | |||
| 478 | 2928166708 | |||
| 479 | 2928541213 | |||
| 480 | 2945940108 | |||
| 481 | 2990707230 | |||
| 482 | 642424186 | |||
| 483 | 642617430 | |||
| 484 | 8020808002 | |||
| 485 | 8020941341 | |||
| 486 | 8020956678 | |||
| 487 | 8039098992 | |||
| 488 | 8040174230 | |||
| 489 | 8053949256 | |||
| 490 | 8057136526 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 3cyj-assembly1.cif.gz_A | crystal structure of a mandelate racemase/muconate lactonizing enzyme-like protein from rubrobacter xylanophilus | 0.9812 | 14 | 372 |
| 3cyj-assembly1.cif.gz_A | crystal structure of a mandelate racemase/muconate lactonizing enzyme-like protein from rubrobacter xylanophilus | 0.9758 | 14 | 372 |
| 3ck5-assembly2.cif.gz_D | crystal structure of a racemase from streptomyces coelicolor a3(2) with bound magnesium | 0.9395 | 15 | 369 |
| 3ck5-assembly1.cif.gz_A | crystal structure of a racemase from streptomyces coelicolor a3(2) with bound magnesium | 0.9382 | 15 | 372 |
| 5xd8-assembly1.cif.gz_A | crystal structure analysis of 3,6-anhydro-l-galactonate cycloisomerase | 0.9346 | 11 | 373 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 3cyjD01 | Alpha Beta;2-Layer Sandwich;Enolase-like; domain 1;Enolase-like, N-terminal domain | 0.983 | 14 | 125 | 3.30.390.10 |
| 3cyjD02 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Enolase-like C-terminal domain | 0.975 | 126 | 363 | 3.20.20.120 |
| 3cyjD02 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Enolase-like C-terminal domain | 0.9709 | 126 | 363 | 3.20.20.120 |
| af_P77215_65_157_3.30.420.40 | Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain | 0.9444 | 45 | 133 | 3.30.420.40 |
| 5xd9A02 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Enolase-like C-terminal domain | 0.9388 | 126 | 362 | 3.20.20.120 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A4Y9QKV4-F1-model_v4 | Mandelate racemase/muconate lactonizing enzyme C-terminal domain-containing protein | 0.9934 | 170 | 372 |
GO:0000287
GO:0016052 GO:0016836 |
| AF-A0A3C1CI87-F1-model_v4 | Mandelate racemase | 0.9892 | 117 | 330 |
GO:0000287
GO:0009063 GO:0016052 GO:0016836 |
| AF-A0A538FGE1-F1-model_v4 | Thiamine pyrophosphate-requiring protein | 0.9887 | 27 | 372 |
GO:0000287
GO:0003824 GO:0009063 GO:0030976 |
| AF-A0A6J4ZSG1-F1-model_v4 | L-rhamnonate dehydratase (EC 4.2.1.90) | 0.9882 | 233 | 373 |
GO:0000287
GO:0016052 GO:0050032 |
| AF-A0A538B735-F1-model_v4 | Mandelate racemase | 0.9881 | 14 | 162 |
GO:0000287
GO:0016052 GO:0016836 |