F357523

General Info

Members Datasets Scaffolds Average Seq Length
245 139 245 189

Family's Representative Sequence

Representative Sequence 3300035691|Ga0373931_0618640|Ga0373931_0618640_46_627
Length 193
Sequence VTNEEVIKVYEDTGALLKGHFRLSSGRHSDRYLQSALVLQYPDQAERLCRALAEKVAPLKPQAVLSPAMGGLFVGHELARALKVRHIFTERNKETDAMELRRGFTVAKGEKIFAVEDIITTGKSVRESYEVVRGLGAEVVGVGCLLDRSGGTNPFDVPVKALASMKVESWDEKDCPLCKQGMPVVKPGSRSKF

Samples

Sample ID Description Type Environment
1 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
2 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
5 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
6 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
7 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
8 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
11 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
12 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
13 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
14 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
15 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
16 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
17 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
18 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
19 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
20 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
21 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
22 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
23 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
24 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
25 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
26 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
27 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
28 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
29 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
30 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
31 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
32 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
33 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
36 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
37 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
38 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
39 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
40 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
41 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
59 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
60 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
63 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
64 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
65 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
66 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
67 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
68 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
69 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
70 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
71 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
72 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
73 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
74 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
75 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
76 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
77 3300041408 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z062817_5195 Metagenome Rhizosphere
78 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
79 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
80 3300042003 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821FE14Z081617_5551 Metagenome Rhizosphere
81 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
82 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
83 3300042129 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_070516_95 Metagenome Rhizosphere
84 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
85 3300042136 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0530F_E14_072516_1294 Metagenome Rhizosphere
86 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
87 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
88 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
89 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
90 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
91 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
92 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
93 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
94 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
95 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
96 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
97 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
98 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
99 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
100 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
101 3300049522 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C24_B_7_control Metagenome Rhizosphere
102 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
103 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
104 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
105 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
106 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
107 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
108 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
109 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
110 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
111 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
112 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
113 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
114 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
115 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
116 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
117 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
118 3300049651 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F3_A_0_drought Metagenome Rhizosphere
119 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
120 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
121 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
122 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
123 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
124 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
125 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
126 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
127 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
128 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
129 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
130 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
131 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
132 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
133 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
134 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
135 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
136 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
137 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
138 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
139 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.86
Nodule 0
Rhizoplane 4.49
Rhizosphere 92.65
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065712_10010243 3300005290 Bacteria 3035
2 Ga0070676_10265315 3300005328 Unclassified 1151
3 Ga0070683_100306039 3300005329 Bacteria 1512
4 Ga0070682_101039365 3300005337 Unclassified 682
5 Ga0070661_100355537 3300005344 Bacteria 1150
6 Ga0070671_100472351 3300005355 Unclassified 1077
7 Ga0070674_100017238 3300005356 Bacteria 4539
8 Ga0070659_101275816 3300005366 Bacteria 651
9 Ga0070713_100004300 3300005436 Bacteria 9545
10 Ga0070678_100532291 3300005456 Bacteria 1041
11 Ga0070662_100121290 3300005457 Bacteria 2004
12 Ga0070681_10988330 3300005458 Bacteria 761
13 Ga0070679_100347192 3300005530 Bacteria 1432
14 Ga0070664_100023279 3300005564 Bacteria 5116
15 Ga0070664_100214601 3300005564 Bacteria 1720
16 Ga0068857_100007454 3300005577 Bacteria 9415
17 Ga0068854_100215054 3300005578 Unclassified 1518
18 Ga0068852_101363267 3300005616 Bacteria 731
19 Ga0068859_101885587 3300005617 Unclassified 660
20 Ga0068866_10129934 3300005718 Unclassified 1431
21 Ga0070717_10308070 3300006028 Bacteria 1409
22 Ga0075364_10304185 3300006051 Bacteria 1086
23 Ga0075362_10022931 3300006177 Bacteria 2634
24 Ga0075362_10052461 3300006177 Bacteria 1828
25 Ga0075367_10007865 3300006178 Bacteria 5487
26 Ga0075366_10025682 3300006195 Bacteria 3444
27 Ga0075428_100000995 3300006844 Bacteria 29993
28 Ga0075428_100019146 3300006844 Bacteria 7572
29 Ga0075428_100025242 3300006844 Bacteria 6577
30 Ga0075428_100211625 3300006844 Unclassified 2095
31 Ga0075428_101588805 3300006844 Unclassified 684
32 Ga0075430_100003143 3300006846 Bacteria 13813
33 Ga0075430_100003168 3300006846 Bacteria 13771
34 Ga0075430_100194774 3300006846 Bacteria 1684
35 Ga0075431_100011342 3300006847 Bacteria 8979
36 Ga0075431_100014869 3300006847 Bacteria 7880
37 Ga0075431_100015000 3300006847 Bacteria 7844
38 Ga0075431_100065942 3300006847 Bacteria 3738
39 Ga0075431_100422151 3300006847 Bacteria 1333
40 Ga0075431_101120750 3300006847 Bacteria 751
41 Ga0075433_10008838 3300006852 Bacteria 8038
42 Ga0075434_100000141 3300006871 Bacteria 43904
43 Ga0075429_100001657 3300006880 Bacteria 18416
44 Ga0075429_100046262 3300006880 Bacteria 3787
45 Ga0075429_100180909 3300006880 Bacteria 1848
46 Ga0075429_100966787 3300006880 Unclassified 745
47 Ga0097620_100177388 3300006931 Bacteria 2213
48 Ga0097620_101885129 3300006931 Unclassified 660
49 Ga0105240_10330196 3300009093 Bacteria 1736
50 Ga0105240_10602573 3300009093 Bacteria 1209
51 Ga0111539_10000201 3300009094 Bacteria 70327
52 Ga0111539_10094520 3300009094 Bacteria 3512
53 Ga0111539_10389032 3300009094 Bacteria 1624
54 Ga0111539_10404965 3300009094 Bacteria 1589
55 Ga0114129_10000751 3300009147 Bacteria 41232
56 Ga0114129_10001134 3300009147 Bacteria 35181
57 Ga0114129_10026664 3300009147 Bacteria 8184
58 Ga0114129_10035177 3300009147 Bacteria 7077
59 Ga0114129_10079346 3300009147 Bacteria 4564
60 Ga0114129_10081856 3300009147 Bacteria 4487
61 Ga0105249_10814718 3300009553 Bacteria 998
62 Ga0157369_10952002 3300013105 Bacteria 880
63 Ga0157374_10450631 3300013296 Bacteria 1288
64 Ga0157372_10023551 3300013307 Bacteria 6677
65 Ga0157372_10806104 3300013307 Bacteria 1091
66 Ga0157380_10048831 3300014326 Bacteria 3335
67 Ga0157380_10381332 3300014326 Bacteria 1330
68 Ga0157377_10290385 3300014745 Bacteria 1075
69 Ga0207707_10372444 3300025912 Bacteria 1229
70 Ga0207707_10832973 3300025912 Bacteria 767
71 Ga0207695_10683448 3300025913 Bacteria 907
72 Ga0207649_10313815 3300025920 Bacteria 1150
73 Ga0207652_10552462 3300025921 Bacteria 1035
74 Ga0207700_10074998 3300025928 Unclassified 2619
75 Ga0207644_10660777 3300025931 Unclassified 870
76 Ga0207690_10143954 3300025932 Bacteria 1760
77 Ga0207706_10186110 3300025933 Bacteria 1823
78 Ga0207669_10092849 3300025937 Bacteria 1970
79 Ga0207669_10464931 3300025937 Bacteria 1005
80 Ga0207704_10406808 3300025938 Bacteria 1075
81 Ga0207691_10569104 3300025940 Bacteria 960
82 Ga0207679_10008136 3300025945 Bacteria 6671
83 Ga0207679_10193359 3300025945 Bacteria 1694
84 Ga0207651_10487025 3300025960 Unclassified 1064
85 Ga0207639_10199262 3300026041 Bacteria 1716
86 Ga0207674_10012051 3300026116 Bacteria 9684
87 Ga0207674_10418973 3300026116 Bacteria 1294
88 Ga0207675_100005607 3300026118 Bacteria 12023
89 Ga0207683_10476522 3300026121 Bacteria 1152
90 Ga0209971_1025091 3300027682 Unclassified 1424
91 Ga0209971_1063797 3300027682 Bacteria 892
92 Ga0207428_10000445 3300027907 Bacteria 50527
93 Ga0207428_10420540 3300027907 Bacteria 977
94 Ga0268266_10242604 3300028379 Bacteria 1664
95 Ga0268265_10433976 3300028380 Unclassified 1223
96 Ga0268265_11010508 3300028380 Bacteria 822
97 Ga0307408_100005759 3300031548 Bacteria 8254
98 Ga0307408_100017479 3300031548 Bacteria 4800
99 Ga0307408_100076116 3300031548 Unclassified 2495
100 Ga0307408_100105454 3300031548 Bacteria 2155
101 Ga0307405_10171283 3300031731 Bacteria 1549
102 Ga0307405_10217233 3300031731 Bacteria 1400
103 Ga0307405_10230241 3300031731 Bacteria 1366
104 Ga0307405_10261691 3300031731 Unclassified 1292
105 Ga0307413_10092328 3300031824 Bacteria 1975
106 Ga0307410_10024394 3300031852 Bacteria 3777
107 Ga0307406_10727071 3300031901 Bacteria 831
108 Ga0307409_100025059 3300031995 Bacteria 4175
109 Ga0307409_100129776 3300031995 Bacteria 2152
110 Ga0307416_100065320 3300032002 Bacteria 2990
111 Ga0307416_100076446 3300032002 Bacteria 2806
112 Ga0307416_100079441 3300032002 Bacteria 2764
113 Ga0307416_100119805 3300032002 Bacteria 2342
114 Ga0307416_100214543 3300032002 Bacteria 1839
115 Ga0307416_100280555 3300032002 Bacteria 1642
116 Ga0307411_10084009 3300032005 Bacteria 2201
117 Ga0307411_11110178 3300032005 Bacteria 713
118 Ga0307415_100059156 3300032126 Bacteria 2641
119 Ga0373944_0338693 3300035089 Unclassified 570
120 Ga0373931_0618640 3300035691 Unclassified 709
121 Ga0373933_0038087 3300035724 Bacteria 2825
122 Ga0373947_0779111 3300035725 Bacteria 653
123 Ga0373937_0000513 3300036401 Bacteria 35017
124 Ga0395900_0347731 3300037418 Bacteria 1457
125 Ga0439453_0013452 3300041408 Bacteria 1391
126 Ga0439431_0042128 3300041997 Bacteria 1166
127 Ga0439433_0040288 3300041999 Bacteria 1086
128 Ga0439443_008690 3300042003 Bacteria 1440
129 Ga0439450_001831 3300042008 Bacteria 3209
130 Ga0439462_0044815 3300042015 Bacteria 1184
131 Ga0450891_012766 3300042129 Bacteria 785
132 Ga0450898_090537 3300042134 Bacteria 631
133 Ga0450900_004887 3300042136 Bacteria 1562
134 Ga0439434_0178023 3300042435 Unclassified 711
135 Ga0439435_0003326 3300042436 Bacteria 3331
136 Ga0439435_0063902 3300042436 Bacteria 1077
137 Ga0439464_0006098 3300042439 Bacteria 3134
138 Ga0451577_0213552 3300042876 Bacteria 1743
139 Ga0495603_0030990 3300046455 Unclassified 3220
140 Ga0495629_0600725 3300046459 Unclassified 736
141 Ga0495656_0228819 3300046615 Unclassified 932
142 Ga0495674_0178564 3300047319 Unclassified 1769
143 Ga0496100_0115453 3300048903 Bacteria 1872
144 Ga0496102_0045261 3300048905 Bacteria 3995
145 Ga0496103_0172167 3300048906 Bacteria 1390
146 Ga0496104_0334657 3300048907 Bacteria 1427
147 Ga0496104_0361094 3300048907 Bacteria 1365
148 Ga0496106_0073611 3300048909 Unclassified 2614
149 Ga0496106_0182684 3300048909 Bacteria 1665
150 Ga0496112_0022345 3300048915 Bacteria 6028
151 Ga0496112_0028904 3300048915 Bacteria 5357
152 Ga0496112_0659214 3300048915 Bacteria 976
153 Ga0496114_0078504 3300048917 Unclassified 2785
154 Ga0501299_074227 3300049522 Bacteria 744
155 Ga0501032_0349112 3300049569 Bacteria 953
156 Ga0501036_0014562 3300049572 Bacteria 6549
157 Ga0501036_0107252 3300049572 Bacteria 2362
158 Ga0501036_0209546 3300049572 Unclassified 1638
159 Ga0501036_0362025 3300049572 Bacteria 1211
160 Ga0501036_0483808 3300049572 Bacteria 1030
161 Ga0501037_0430524 3300049573 Bacteria 902
162 Ga0501039_0365010 3300049575 Bacteria 1134
163 Ga0501040_0207446 3300049576 Bacteria 1392
164 Ga0501040_0276899 3300049576 Bacteria 1198
165 Ga0501041_0022982 3300049577 Bacteria 3737
166 Ga0501041_0293662 3300049577 Bacteria 1024
167 Ga0501041_0499927 3300049577 Bacteria 774
168 Ga0501041_0670282 3300049577 Bacteria 663
169 Ga0501042_0428026 3300049578 Bacteria 959
170 Ga0501042_0438198 3300049578 Bacteria 947
171 Ga0501042_0457473 3300049578 Bacteria 926
172 Ga0501046_0240904 3300049580 Unclassified 1334
173 Ga0501046_0408452 3300049580 Bacteria 980
174 Ga0501048_0155918 3300049582 Bacteria 1615
175 Ga0501067_0037281 3300049583 Bacteria 2701
176 Ga0501069_0600619 3300049585 Unclassified 660
177 Ga0501071_0023130 3300049587 Bacteria 4338
178 Ga0501071_0053000 3300049587 Bacteria 2925
179 Ga0501071_0432124 3300049587 Bacteria 1007
180 Ga0501071_0468244 3300049587 Bacteria 965
181 Ga0501072_0246128 3300049588 Bacteria 1424
182 Ga0501072_0296002 3300049588 Bacteria 1286
183 Ga0501072_0348414 3300049588 Bacteria 1176
184 Ga0501072_0779593 3300049588 Bacteria 749
185 Ga0501074_0069712 3300049590 Bacteria 2528
186 Ga0501075_0030563 3300049591 Bacteria 3991
187 Ga0501075_0066744 3300049591 Bacteria 2715
188 Ga0501075_0133109 3300049591 Bacteria 1894
189 Ga0501076_0018494 3300049592 Bacteria 5315
190 Ga0501076_0060409 3300049592 Bacteria 3016
191 Ga0501076_0204030 3300049592 Bacteria 1615
192 Ga0501076_0459694 3300049592 Unclassified 1048
193 Ga0501201_030343 3300049651 Unclassified 613
194 Ga0501079_0047073 3300049741 Bacteria 3328
195 Ga0501079_0388093 3300049741 Bacteria 1095
196 Ga0501079_0633203 3300049741 Bacteria 842
197 Ga0501079_0874953 3300049741 Bacteria 707
198 Ga0501080_0344598 3300049742 Bacteria 1346
199 Ga0501080_0483493 3300049742 Bacteria 1108
200 Ga0501080_1015024 3300049742 Bacteria 719
201 Ga0501081_0431784 3300049743 Bacteria 977
202 Ga0501081_0694644 3300049743 Bacteria 764
203 Ga0501083_0110934 3300049744 Bacteria 1804
204 Ga0501045_0011044 3300049824 Bacteria 6331
205 Ga0501045_0069908 3300049824 Bacteria 2582
206 Ga0501045_0156415 3300049824 Unclassified 1696
207 Ga0501045_0386141 3300049824 Bacteria 1042
208 nmdc:mga03683_46176_c1 3300050489 Bacteria 1805
209 nmdc:mga00v17_533115_c1 3300050491 Bacteria 760
210 nmdc:mga05p37_1089_c2 3300050507 Bacteria 22817
211 nmdc:mga05p37_311380_c1 3300050507 Bacteria 1866
212 nmdc:mga05p37_48699_c1 3300050507 Bacteria 5212
213 nmdc:mga05p37_634862_c1 3300050507 Bacteria 1199
214 nmdc:mga05p37_638_c1 3300050507 Bacteria 38795
215 nmdc:mga05p37_7289_c1 3300050507 Bacteria 13048
216 nmdc:mga09592_2104_c1 3300050508 Bacteria 16079
217 nmdc:mga09592_98413_c1 3300050508 Bacteria 2504
218 nmdc:mga0qj67_1418_c1 3300050509 Bacteria 16781
219 nmdc:mga0qj67_664772_c1 3300050509 Bacteria 831
220 nmdc:mga0qj67_69504_c1 3300050509 Bacteria 2809
221 nmdc:mga06r32_16179_c1 3300050510 Bacteria 6795
222 nmdc:mga06r32_313177_c1 3300050510 Bacteria 1555
223 nmdc:mga06r32_333959_c1 3300050510 Bacteria 1501
224 nmdc:mga06r32_422055_c1 3300050510 Bacteria 1315
225 nmdc:mga06r32_7742_c1 3300050510 Bacteria 9661
226 nmdc:mga08y16_150757_c1 3300050511 Bacteria 2417
227 nmdc:mga08y16_331967_c1 3300050511 Bacteria 1564
228 nmdc:mga08y16_360634_c1 3300050511 Bacteria 1492
229 nmdc:mga08y16_444431_c1 3300050511 Bacteria 1323
230 nmdc:mga08y16_4743_c1 3300050511 Bacteria 14177
231 nmdc:mga0n895_6198_c1 3300050512 Bacteria 10115
232 nmdc:mga0a205_132715_c1 3300050515 Bacteria 2391
233 nmdc:mga0a205_5817_c2 3300050515 Bacteria 10450
234 Ga0501084_0035846 3300054114 Bacteria 4147
235 Ga0501084_0194365 3300054114 Bacteria 1712
236 Ga0501084_0861207 3300054114 Bacteria 762
237 Ga0590071_001159 3300059421 Bacteria 7127
238 Ga0590071_028309 3300059421 Bacteria 1331
239 Ga0590074_008679 3300059423 Bacteria 1691
240 Ga0590075_006520 3300059424 Bacteria 2766
241 Ga0590075_063293 3300059424 Bacteria 954
242 Ga0590077_000251 3300059426 Bacteria 15342
243 Ga0501082_0188971 3300060353 Bacteria 1792
244 Ga0501082_0208317 3300060353 Bacteria 1701
245 Ga0530510_0445967 3300061734 Bacteria 978

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300006844 Ga0075428_100211625 Ga0075428_1002116253 169
2 3300009147 Ga0114129_10001134 Ga0114129_1000113414 169
3 3300050507 nmdc:mga05p37_1089_c2 nmdc:mga05p37_1089_c2_5521_6090 169
4 3300048907 Ga0496104_0334657 Ga0496104_0334657_708_1277 171
5 3300035089 Ga0373944_0338693 Ga0373944_0338693_11_532 173
6 3300031548 Ga0307408_100017479 Ga0307408_1000174792 179
7 3300031731 Ga0307405_10217233 Ga0307405_102172332 179
8 3300031824 Ga0307413_10092328 Ga0307413_100923282 179
9 3300031852 Ga0307410_10024394 Ga0307410_100243944 179
10 3300031995 Ga0307409_100025059 Ga0307409_1000250593 179
11 3300032002 Ga0307416_100079441 Ga0307416_1000794412 179
12 3300032126 Ga0307415_100059156 Ga0307415_1000591562 179
13 3300005337 Ga0070682_101039365 Ga0070682_1010393651 180
14 3300049583 Ga0501067_0037281 Ga0501067_0037281_1187_1756 180
15 3300049585 Ga0501069_0600619 Ga0501069_0600619_79_648 180
16 3300006177 Ga0075362_10052461 Ga0075362_100524612 182
17 3300006051 Ga0075364_10304185 Ga0075364_103041852 183
18 3300049577 Ga0501041_0293662 Ga0501041_0293662_342_908 183
19 3300050491 nmdc:mga00v17_533115_c1 nmdc:mga00v17_533115_c1_38_625 183
20 3300054114 Ga0501084_0861207 Ga0501084_0861207_21_587 183
21 3300050489 nmdc:mga03683_46176_c1 nmdc:mga03683_46176_c1_470_1057 184
22 3300006844 Ga0075428_100000995 Ga0075428_1000009953 186
23 3300006846 Ga0075430_100003168 Ga0075430_1000031689 186
24 3300006847 Ga0075431_100015000 Ga0075431_1000150002 186
25 3300006880 Ga0075429_100001657 Ga0075429_10000165712 186
26 3300009094 Ga0111539_10000201 Ga0111539_1000020124 186
27 3300009147 Ga0114129_10000751 Ga0114129_100007515 186
28 3300027907 Ga0207428_10000445 Ga0207428_1000044526 186
29 3300031548 Ga0307408_100005759 Ga0307408_1000057594 186
30 3300031548 Ga0307408_100076116 Ga0307408_1000761163 186
31 3300031731 Ga0307405_10261691 Ga0307405_102616911 186
32 3300032002 Ga0307416_100076446 Ga0307416_1000764464 186
33 3300032002 Ga0307416_100280555 Ga0307416_1002805551 186
34 3300042008 Ga0439450_001831 Ga0439450_001831_19_585 186
35 3300042439 Ga0439464_0006098 Ga0439464_0006098_890_1456 186
36 3300049522 Ga0501299_074227 Ga0501299_074227_160_726 186
37 3300049651 Ga0501201_030343 Ga0501201_030343_33_599 186
38 3300050507 nmdc:mga05p37_638_c1 nmdc:mga05p37_638_c1_4618_5184 186
39 3300050508 nmdc:mga09592_2104_c1 nmdc:mga09592_2104_c1_2379_2945 186
40 3300050509 nmdc:mga0qj67_1418_c1 nmdc:mga0qj67_1418_c1_3641_4207 186
41 3300050510 nmdc:mga06r32_7742_c1 nmdc:mga06r32_7742_c1_1749_2315 186
42 3300050511 nmdc:mga08y16_4743_c1 nmdc:mga08y16_4743_c1_6921_7487 186
43 3300005328 Ga0070676_10265315 Ga0070676_102653151 188
44 3300005355 Ga0070671_100472351 Ga0070671_1004723512 188
45 3300005578 Ga0068854_100215054 Ga0068854_1002150542 188
46 3300005718 Ga0068866_10129934 Ga0068866_101299342 188
47 3300014326 Ga0157380_10381332 Ga0157380_103813321 188
48 3300025931 Ga0207644_10660777 Ga0207644_106607772 188
49 3300025938 Ga0207704_10406808 Ga0207704_104068081 188
50 3300025940 Ga0207691_10569104 Ga0207691_105691041 188
51 3300026118 Ga0207675_100005607 Ga0207675_1000056077 188
52 3300046455 Ga0495603_0030990 Ga0495603_0030990_2552_3118 188
53 3300046459 Ga0495629_0600725 Ga0495629_0600725_75_641 188
54 3300048909 Ga0496106_0073611 Ga0496106_0073611_37_603 188
55 3300048917 Ga0496114_0078504 Ga0496114_0078504_290_856 188
56 3300005329 Ga0070683_100306039 Ga0070683_1003060392 189
57 3300005344 Ga0070661_100355537 Ga0070661_1003555372 189
58 3300005356 Ga0070674_100017238 Ga0070674_1000172382 189
59 3300005366 Ga0070659_101275816 Ga0070659_1012758161 189
60 3300005436 Ga0070713_100004300 Ga0070713_1000043005 189
61 3300005457 Ga0070662_100121290 Ga0070662_1001212902 189
62 3300005458 Ga0070681_10988330 Ga0070681_109883301 189
63 3300005530 Ga0070679_100347192 Ga0070679_1003471922 189
64 3300005564 Ga0070664_100214601 Ga0070664_1002146012 189
65 3300005617 Ga0068859_101885587 Ga0068859_1018855871 189
66 3300006028 Ga0070717_10308070 Ga0070717_103080702 189
67 3300006178 Ga0075367_10007865 Ga0075367_100078654 189
68 3300006195 Ga0075366_10025682 Ga0075366_100256822 189
69 3300006844 Ga0075428_100019146 Ga0075428_1000191465 189
70 3300006844 Ga0075428_100025242 Ga0075428_1000252426 189
71 3300006844 Ga0075428_101588805 Ga0075428_1015888051 189
72 3300006846 Ga0075430_100003143 Ga0075430_10000314311 189
73 3300006846 Ga0075430_100194774 Ga0075430_1001947742 189
74 3300006847 Ga0075431_100011342 Ga0075431_1000113428 189
75 3300006847 Ga0075431_100065942 Ga0075431_1000659422 189
76 3300006847 Ga0075431_100422151 Ga0075431_1004221512 189
77 3300006847 Ga0075431_101120750 Ga0075431_1011207502 189
78 3300006852 Ga0075433_10008838 Ga0075433_100088387 189
79 3300006880 Ga0075429_100046262 Ga0075429_1000462624 189
80 3300006880 Ga0075429_100180909 Ga0075429_1001809093 189
81 3300006880 Ga0075429_100966787 Ga0075429_1009667872 189
82 3300006931 Ga0097620_100177388 Ga0097620_1001773883 189
83 3300006931 Ga0097620_101885129 Ga0097620_1018851291 189
84 3300009093 Ga0105240_10330196 Ga0105240_103301962 189
85 3300009093 Ga0105240_10602573 Ga0105240_106025732 189
86 3300009094 Ga0111539_10094520 Ga0111539_100945202 189
87 3300009094 Ga0111539_10389032 Ga0111539_103890322 189
88 3300009094 Ga0111539_10404965 Ga0111539_104049652 189
89 3300009147 Ga0114129_10026664 Ga0114129_100266642 189
90 3300009147 Ga0114129_10035177 Ga0114129_100351772 189
91 3300009147 Ga0114129_10079346 Ga0114129_100793463 189
92 3300009147 Ga0114129_10081856 Ga0114129_100818563 189
93 3300009553 Ga0105249_10814718 Ga0105249_108147182 189
94 3300013105 Ga0157369_10952002 Ga0157369_109520022 189
95 3300013296 Ga0157374_10450631 Ga0157374_104506312 189
96 3300013307 Ga0157372_10023551 Ga0157372_100235512 189
97 3300013307 Ga0157372_10806104 Ga0157372_108061042 189
98 3300014745 Ga0157377_10290385 Ga0157377_102903852 189
99 3300025912 Ga0207707_10372444 Ga0207707_103724442 189
100 3300025912 Ga0207707_10832973 Ga0207707_108329731 189
101 3300025913 Ga0207695_10683448 Ga0207695_106834482 189
102 3300025920 Ga0207649_10313815 Ga0207649_103138152 189
103 3300025921 Ga0207652_10552462 Ga0207652_105524621 189
104 3300025928 Ga0207700_10074998 Ga0207700_100749981 189
105 3300025932 Ga0207690_10143954 Ga0207690_101439542 189
106 3300025933 Ga0207706_10186110 Ga0207706_101861103 189
107 3300025937 Ga0207669_10092849 Ga0207669_100928492 189
108 3300025945 Ga0207679_10193359 Ga0207679_101933592 189
109 3300025960 Ga0207651_10487025 Ga0207651_104870252 189
110 3300026041 Ga0207639_10199262 Ga0207639_101992622 189
111 3300026116 Ga0207674_10418973 Ga0207674_104189732 189
112 3300027682 Ga0209971_1063797 Ga0209971_10637971 189
113 3300027907 Ga0207428_10420540 Ga0207428_104205401 189
114 3300028379 Ga0268266_10242604 Ga0268266_102426042 189
115 3300028380 Ga0268265_10433976 Ga0268265_104339762 189
116 3300028380 Ga0268265_11010508 Ga0268265_110105081 189
117 3300031731 Ga0307405_10171283 Ga0307405_101712832 189
118 3300031731 Ga0307405_10230241 Ga0307405_102302412 189
119 3300031901 Ga0307406_10727071 Ga0307406_107270712 189
120 3300031995 Ga0307409_100129776 Ga0307409_1001297762 189
121 3300032002 Ga0307416_100065320 Ga0307416_1000653202 189
122 3300032002 Ga0307416_100119805 Ga0307416_1001198052 189
123 3300032002 Ga0307416_100214543 Ga0307416_1002145431 189
124 3300032005 Ga0307411_10084009 Ga0307411_100840092 189
125 3300032005 Ga0307411_11110178 Ga0307411_111101781 189
126 3300035724 Ga0373933_0038087 Ga0373933_0038087_1869_2438 189
127 3300035725 Ga0373947_0779111 Ga0373947_0779111_10_579 189
128 3300036401 Ga0373937_0000513 Ga0373937_0000513_8947_9516 189
129 3300037418 Ga0395900_0347731 Ga0395900_0347731_191_760 189
130 3300041997 Ga0439431_0042128 Ga0439431_0042128_152_721 189
131 3300041999 Ga0439433_0040288 Ga0439433_0040288_461_1030 189
132 3300042003 Ga0439443_008690 Ga0439443_008690_357_932 189
133 3300042015 Ga0439462_0044815 Ga0439462_0044815_540_1127 189
134 3300042129 Ga0450891_012766 Ga0450891_012766_159_728 189
135 3300042134 Ga0450898_090537 Ga0450898_090537_34_603 189
136 3300042136 Ga0450900_004887 Ga0450900_004887_669_1238 189
137 3300042436 Ga0439435_0003326 Ga0439435_0003326_107_682 189
138 3300046615 Ga0495656_0228819 Ga0495656_0228819_291_860 189
139 3300047319 Ga0495674_0178564 Ga0495674_0178564_1106_1675 189
140 3300048903 Ga0496100_0115453 Ga0496100_0115453_468_1037 189
141 3300048905 Ga0496102_0045261 Ga0496102_0045261_3372_3941 189
142 3300048906 Ga0496103_0172167 Ga0496103_0172167_22_591 189
143 3300048907 Ga0496104_0361094 Ga0496104_0361094_412_981 189
144 3300048909 Ga0496106_0182684 Ga0496106_0182684_280_849 189
145 3300048915 Ga0496112_0022345 Ga0496112_0022345_5331_5900 189
146 3300048915 Ga0496112_0028904 Ga0496112_0028904_2274_2843 189
147 3300048915 Ga0496112_0659214 Ga0496112_0659214_384_953 189
148 3300049569 Ga0501032_0349112 Ga0501032_0349112_129_698 189
149 3300049572 Ga0501036_0014562 Ga0501036_0014562_5527_6096 189
150 3300049572 Ga0501036_0107252 Ga0501036_0107252_974_1543 189
151 3300049572 Ga0501036_0209546 Ga0501036_0209546_727_1296 189
152 3300049572 Ga0501036_0483808 Ga0501036_0483808_378_947 189
153 3300049573 Ga0501037_0430524 Ga0501037_0430524_26_595 189
154 3300049575 Ga0501039_0365010 Ga0501039_0365010_199_768 189
155 3300049576 Ga0501040_0207446 Ga0501040_0207446_349_918 189
156 3300049576 Ga0501040_0276899 Ga0501040_0276899_150_719 189
157 3300049577 Ga0501041_0022982 Ga0501041_0022982_1296_1865 189
158 3300049577 Ga0501041_0499927 Ga0501041_0499927_157_726 189
159 3300049577 Ga0501041_0670282 Ga0501041_0670282_37_606 189
160 3300049578 Ga0501042_0428026 Ga0501042_0428026_336_905 189
161 3300049578 Ga0501042_0438198 Ga0501042_0438198_360_929 189
162 3300049578 Ga0501042_0457473 Ga0501042_0457473_176_745 189
163 3300049580 Ga0501046_0240904 Ga0501046_0240904_523_1092 189
164 3300049580 Ga0501046_0408452 Ga0501046_0408452_21_590 189
165 3300049582 Ga0501048_0155918 Ga0501048_0155918_962_1531 189
166 3300049587 Ga0501071_0023130 Ga0501071_0023130_2751_3320 189
167 3300049587 Ga0501071_0053000 Ga0501071_0053000_2170_2739 189
168 3300049587 Ga0501071_0432124 Ga0501071_0432124_303_872 189
169 3300049588 Ga0501072_0246128 Ga0501072_0246128_726_1295 189
170 3300049588 Ga0501072_0296002 Ga0501072_0296002_431_1000 189
171 3300049588 Ga0501072_0348414 Ga0501072_0348414_192_761 189
172 3300049590 Ga0501074_0069712 Ga0501074_0069712_589_1158 189
173 3300049591 Ga0501075_0030563 Ga0501075_0030563_3243_3812 189
174 3300049591 Ga0501075_0066744 Ga0501075_0066744_1521_2090 189
175 3300049591 Ga0501075_0133109 Ga0501075_0133109_593_1162 189
176 3300049592 Ga0501076_0018494 Ga0501076_0018494_4723_5292 189
177 3300049592 Ga0501076_0459694 Ga0501076_0459694_295_864 189
178 3300049741 Ga0501079_0047073 Ga0501079_0047073_2533_3102 189
179 3300049741 Ga0501079_0874953 Ga0501079_0874953_105_674 189
180 3300049742 Ga0501080_0483493 Ga0501080_0483493_165_734 189
181 3300049743 Ga0501081_0431784 Ga0501081_0431784_67_636 189
182 3300049744 Ga0501083_0110934 Ga0501083_0110934_41_610 189
183 3300049824 Ga0501045_0011044 Ga0501045_0011044_598_1167 189
184 3300049824 Ga0501045_0069908 Ga0501045_0069908_337_906 189
185 3300049824 Ga0501045_0156415 Ga0501045_0156415_846_1415 189
186 3300049824 Ga0501045_0386141 Ga0501045_0386141_97_666 189
187 3300050507 nmdc:mga05p37_311380_c1 nmdc:mga05p37_311380_c1_400_975 189
188 3300050507 nmdc:mga05p37_48699_c1 nmdc:mga05p37_48699_c1_1171_1746 189
189 3300050507 nmdc:mga05p37_634862_c1 nmdc:mga05p37_634862_c1_537_1106 189
190 3300050507 nmdc:mga05p37_7289_c1 nmdc:mga05p37_7289_c1_9247_9816 189
191 3300050508 nmdc:mga09592_98413_c1 nmdc:mga09592_98413_c1_268_843 189
192 3300050509 nmdc:mga0qj67_664772_c1 nmdc:mga0qj67_664772_c1_160_729 189
193 3300050509 nmdc:mga0qj67_69504_c1 nmdc:mga0qj67_69504_c1_1382_1951 189
194 3300050510 nmdc:mga06r32_16179_c1 nmdc:mga06r32_16179_c1_123_698 189
195 3300050510 nmdc:mga06r32_313177_c1 nmdc:mga06r32_313177_c1_760_1329 189
196 3300050510 nmdc:mga06r32_333959_c1 nmdc:mga06r32_333959_c1_788_1357 189
197 3300050511 nmdc:mga08y16_150757_c1 nmdc:mga08y16_150757_c1_1363_1938 189
198 3300050511 nmdc:mga08y16_331967_c1 nmdc:mga08y16_331967_c1_621_1190 189
199 3300050511 nmdc:mga08y16_360634_c1 nmdc:mga08y16_360634_c1_82_657 189
200 3300050511 nmdc:mga08y16_444431_c1 nmdc:mga08y16_444431_c1_706_1275 189
201 3300050515 nmdc:mga0a205_132715_c1 nmdc:mga0a205_132715_c1_722_1297 189
202 3300054114 Ga0501084_0035846 Ga0501084_0035846_699_1268 189
203 3300059421 Ga0590071_001159 Ga0590071_001159_6293_6862 189
204 3300059421 Ga0590071_028309 Ga0590071_028309_194_763 189
205 3300059423 Ga0590074_008679 Ga0590074_008679_1074_1643 189
206 3300059424 Ga0590075_006520 Ga0590075_006520_1983_2552 189
207 3300059424 Ga0590075_063293 Ga0590075_063293_278_847 189
208 3300059426 Ga0590077_000251 Ga0590077_000251_8484_9053 189
209 3300060353 Ga0501082_0188971 Ga0501082_0188971_29_598 189
210 3300060353 Ga0501082_0208317 Ga0501082_0208317_1079_1648 189
211 3300061734 Ga0530510_0445967 Ga0530510_0445967_67_636 189
212 3300005290 Ga0065712_10010243 Ga0065712_100102432 190
213 3300005456 Ga0070678_100532291 Ga0070678_1005322912 190
214 3300005564 Ga0070664_100023279 Ga0070664_1000232793 190
215 3300005577 Ga0068857_100007454 Ga0068857_1000074545 190
216 3300005616 Ga0068852_101363267 Ga0068852_1013632671 190
217 3300006177 Ga0075362_10022931 Ga0075362_100229313 190
218 3300006847 Ga0075431_100014869 Ga0075431_1000148695 190
219 3300006871 Ga0075434_100000141 Ga0075434_10000014132 190
220 3300014326 Ga0157380_10048831 Ga0157380_100488312 190
221 3300025937 Ga0207669_10464931 Ga0207669_104649312 190
222 3300025945 Ga0207679_10008136 Ga0207679_100081364 190
223 3300026116 Ga0207674_10012051 Ga0207674_100120518 190
224 3300026121 Ga0207683_10476522 Ga0207683_104765222 190
225 3300027682 Ga0209971_1025091 Ga0209971_10250912 190
226 3300031548 Ga0307408_100105454 Ga0307408_1001054542 190
227 3300035691 Ga0373931_0618640 Ga0373931_0618640_46_627 190
228 3300041408 Ga0439453_0013452 Ga0439453_0013452_216_788 190
229 3300042435 Ga0439434_0178023 Ga0439434_0178023_86_658 190
230 3300042436 Ga0439435_0063902 Ga0439435_0063902_331_903 190
231 3300042876 Ga0451577_0213552 Ga0451577_0213552_1080_1655 190
232 3300049572 Ga0501036_0362025 Ga0501036_0362025_24_596 190
233 3300049587 Ga0501071_0468244 Ga0501071_0468244_289_861 190
234 3300049588 Ga0501072_0779593 Ga0501072_0779593_123_695 190
235 3300049592 Ga0501076_0060409 Ga0501076_0060409_456_1028 190
236 3300049592 Ga0501076_0204030 Ga0501076_0204030_269_841 190
237 3300049741 Ga0501079_0388093 Ga0501079_0388093_494_1066 190
238 3300049741 Ga0501079_0633203 Ga0501079_0633203_31_603 190
239 3300049742 Ga0501080_0344598 Ga0501080_0344598_108_680 190
240 3300049742 Ga0501080_1015024 Ga0501080_1015024_57_629 190
241 3300049743 Ga0501081_0694644 Ga0501081_0694644_177_749 190
242 3300050510 nmdc:mga06r32_422055_c1 nmdc:mga06r32_422055_c1_254_826 190
243 3300050512 nmdc:mga0n895_6198_c1 nmdc:mga0n895_6198_c1_9142_9714 190
244 3300050515 nmdc:mga0a205_5817_c2 nmdc:mga0a205_5817_c2_4534_5106 190
245 3300054114 Ga0501084_0194365 Ga0501084_0194365_479_1051 190

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00156

Pribosyltran

Phosphoribosyl transferase domain

38

175

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
4paw-assembly1.cif.gz_A structure of hypothetical protein hp1257. 0.9024 6 182
4lza-assembly1.cif.gz_B crystal structure of adenine phosphoribosyltransferase from thermoanaerobacter pseudethanolicus atcc 33223, nysgrc target 029700. 0.8649 31 163
4ohc-assembly1.cif.gz_D crystal structure of orotate phosphoribosyltransferase (oprtase) from burkholderia cenocepacia 0.8609 3 162
6w1i-assembly1.cif.gz_D re-interpretation of ppgpp (g4p) electron density in the deposited crystal structure of xanthine phosphoribosyltransferase (xprt) (1y0b). 0.8537 42 165
2aee-assembly1.cif.gz_A crystal structure of orotate phosphoribosyltransferase from streptococcus pyogenes 0.8505 1 162
ID Description Score Start End Superfamily
4pawB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9126 6 182 3.40.50.2020
af_Q59040_42_210_3.40.50.2020 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.8704 43 163 3.40.50.2020
af_Q4DBC5_255_457_3.40.50.2020 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.8629 5 163 3.40.50.2020
4pawB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.8495 6 182 3.40.50.2020
1y0bB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.8469 47 165 3.40.50.2020
ID Description Score Start End GO Terms
AF-A0A2V9PQC8-F1-model_v4 Orotate phosphoribosyltransferase (EC 2.4.2.10) 0.9803 5 145 GO:0004588
GO:0019856
GO:0044205
AF-A0A838U9J1-F1-model_v4 orotate phosphoribosyltransferase (EC 2.4.2.10) 0.9767 6 128 GO:0004588
GO:0016020
GO:0019856
GO:0044205
AF-A0A430RY41-F1-model_v4 Orotate phosphoribosyltransferase (EC 2.4.2.10) 0.9739 6 138 GO:0004588
GO:0019856
GO:0044205
AF-A0A7W1DTK7-F1-model_v4 Orotate phosphoribosyltransferase (OPRT) (OPRTase) (EC 2.4.2.10) 0.9726 6 188 GO:0000287
GO:0004588
GO:0019856
GO:0044205
AF-A0A1G1GAB1-F1-model_v4 Orotate phosphoribosyltransferase (EC 2.4.2.10) 0.9721 8 132 GO:0004588
GO:0019856
GO:0044205

Feature Viewer

pLDDT pTM Quality
92.67 0.86 High
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Predicted Structure (AlphaFold2)

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