F357703

General Info

Members Datasets Scaffolds Average Seq Length
245 180 244 606

Family's Representative Sequence

Representative Sequence 3300049572|Ga0501036_0014093|Ga0501036_0014093_540_2387
Length 615
Sequence MALRIEDYALIGDTRTAALVGRNGSIDWLCWPRFDSDACFAALLGDEQNGHWLIAPKNTDKNDKAKITRRYRPNTLILETRFETAGGVVTLTDFMSQRGTGSRIIRIVRGEKGRVAMHSQLVLRFGYGAVVPWVTRLDDQTIRGIAGPDMVLLRSDVKMHGENMRTVGDFTVSAGETASFVLTYASSHDEPPDASDPEADLAAVEEGWTKWTSRNKLGGEPWGEAVTRSLITLKALTYGPTGGIVAAPTTSLPEQIGGQRNWDYRFCWLRDSTLTLLALMNAGYYDEAKKWREWLLRAVAGSPNQVQIMYGLAGERRLTEWEVGWLPGYEKSAPVRIGNEAHNQLQLDVLGELMDTLHQARSGGLAPSIDGWNVEVEFLKHLATIWRNKDSGIWEVRGEEQHFVYSKVMAWVAFDRAIRSARQFKLDGDIAQWKNIRDQIHADVCARGFDTKRNTFVRAYGSKDLDASLLLLPAVGFLKPDDPRVIGTIAAIEKDLVVDGLVLRYDTELADDGLPPGEGFFLACSFWLVDAYLLLGHRDKATALFERLLKLRNDVGLLSEEYDLRSNRQVGNFPQALSHLALVNSASNLAHSEKPAEQRADLKESDRKAIREPAN

Samples

Sample ID Description Type Environment
1 2643221651 Afipia sp. Root123D2 Isolate Unclassified
2 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
13 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
14 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
15 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
16 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
17 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
18 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
19 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
20 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
21 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
22 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
23 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
24 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
25 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
26 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
27 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
28 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
29 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
30 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
31 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
32 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
33 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
34 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
35 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
36 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
37 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
38 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
39 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
40 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
41 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
42 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
43 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
44 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
45 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
46 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
47 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
49 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
50 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
51 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
52 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
53 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
54 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
55 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
56 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
57 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
58 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
84 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
85 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
86 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
87 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
88 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
89 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
90 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
91 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
92 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
93 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
94 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
95 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
96 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
97 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
98 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
99 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
100 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
101 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
102 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
103 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
104 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
105 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
106 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
107 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
108 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
109 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
110 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
111 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
112 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
113 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
114 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
115 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
116 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
117 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
118 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
119 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
120 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
121 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
122 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
123 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
124 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
125 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
126 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
127 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
128 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
129 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
130 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
131 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
132 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
133 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
134 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
135 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
136 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
137 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
138 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
139 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
140 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
141 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
142 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
143 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
144 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
145 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
146 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
147 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
148 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
149 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
150 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
151 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
152 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
153 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
154 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
155 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
156 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
157 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
158 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
159 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
160 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
161 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
162 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
163 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
164 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
165 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
166 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
167 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
168 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
169 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
170 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
171 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
172 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
173 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
174 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
175 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
176 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
177 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
178 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
179 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
180 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.59
Metatranscriptomes 0
Isolates 0.41

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.41
Nodule 0
Rhizoplane 7.35
Rhizosphere 89.8
Stem 0
Stem Tuber 0
Unclassified 2.45

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065712_10071363 3300005290 Bacteria 5316
2 Ga0070683_100001742 3300005329 Bacteria 16941
3 Ga0068869_100003487 3300005334 Bacteria 9627
4 Ga0070666_10014384 3300005335 Bacteria 5038
5 Ga0070666_10028375 3300005335 Bacteria 3672
6 Ga0068868_100084061 3300005338 Bacteria 2556
7 Ga0070689_100010174 3300005340 Bacteria 6699
8 Ga0070689_100020052 3300005340 Bacteria 4955
9 Ga0070689_100058839 3300005340 Bacteria 2985
10 Ga0070661_100000921 3300005344 Bacteria 21068
11 Ga0070668_100013649 3300005347 Bacteria 6065
12 Ga0070675_100000404 3300005354 Bacteria 29364
13 Ga0070671_100000527 3300005355 Bacteria 26828
14 Ga0070671_100012809 3300005355 Bacteria 6762
15 Ga0070673_100003516 3300005364 Bacteria 9764
16 Ga0070709_10011104 3300005434 Bacteria 5008
17 Ga0070714_100007366 3300005435 Bacteria 8561
18 Ga0070713_100000181 3300005436 Bacteria 41906
19 Ga0070713_100007866 3300005436 Bacteria 7521
20 Ga0070662_100044221 3300005457 Bacteria 3189
21 Ga0070681_10074300 3300005458 Bacteria 3360
22 Ga0068867_100006144 3300005459 Bacteria 8502
23 Ga0070684_100001933 3300005535 Bacteria 15202
24 Ga0070684_100003400 3300005535 Bacteria 11938
25 Ga0070697_100002737 3300005536 Bacteria 13569
26 Ga0070672_100020037 3300005543 Bacteria 4872
27 Ga0070672_100125367 3300005543 Bacteria 2106
28 Ga0070686_100003097 3300005544 Bacteria 9113
29 Ga0070695_100002793 3300005545 Bacteria 10139
30 Ga0070665_100062859 3300005548 Bacteria 3722
31 Ga0070665_100109754 3300005548 Bacteria 2761
32 Ga0068855_100124789 3300005563 Bacteria 2944
33 Ga0070664_100001462 3300005564 Bacteria 18822
34 Ga0068857_100008485 3300005577 Bacteria 8883
35 Ga0068856_100001784 3300005614 Bacteria 22483
36 Ga0070702_100043716 3300005615 Bacteria 2525
37 Ga0068859_100019653 3300005617 Bacteria 6784
38 Ga0068859_100037105 3300005617 Bacteria 4891
39 Ga0068864_100041393 3300005618 Bacteria 3940
40 Ga0068861_100021244 3300005719 Bacteria 4666
41 Ga0068870_10000808 3300005840 Bacteria 12155
42 Ga0068863_100001097 3300005841 Bacteria 27041
43 Ga0068858_100008161 3300005842 Bacteria 10067
44 Ga0068858_100055539 3300005842 Bacteria 3661
45 Ga0068860_100031668 3300005843 Bacteria 5083
46 Ga0068862_100002364 3300005844 Bacteria 16797
47 Ga0081455_10012650 3300005937 Bacteria 8402
48 Ga0081538_10040932 3300005981 Bacteria 2948
49 Ga0097621_100001597 3300006237 Bacteria 15500
50 Ga0068871_100016584 3300006358 Bacteria 5553
51 Ga0075428_100070568 3300006844 Bacteria 3819
52 Ga0075430_100024961 3300006846 Bacteria 5084
53 Ga0075434_100181807 3300006871 Bacteria 2123
54 Ga0075436_100001000 3300006914 Bacteria 18964
55 Ga0097620_100019653 3300006931 Bacteria 6784
56 Ga0097620_100037104 3300006931 Bacteria 4891
57 Ga0111539_10018285 3300009094 Bacteria 8681
58 Ga0105245_10017589 3300009098 Bacteria 6241
59 Ga0105245_10090288 3300009098 Bacteria 2818
60 Ga0105243_10013051 3300009148 Bacteria 6277
61 Ga0105248_10002114 3300009177 Bacteria 21992
62 Ga0105238_10011926 3300009551 Bacteria 8758
63 Ga0157378_10009573 3300013297 Bacteria 8439
64 Ga0157378_10108870 3300013297 Bacteria 2538
65 Ga0163162_10025362 3300013306 Bacteria 5858
66 Ga0157375_10024664 3300013308 Bacteria 5571
67 Ga0163163_10182034 3300014325 Bacteria 2149
68 Ga0157377_10002086 3300014745 Bacteria 8784
69 Ga0157376_10031416 3300014969 Bacteria 4252
70 Ga0207643_10030949 3300025908 Bacteria 2982
71 Ga0207707_10010665 3300025912 Bacteria 7983
72 Ga0207695_10000803 3300025913 Bacteria 58645
73 Ga0207657_10016578 3300025919 Bacteria 7098
74 Ga0207650_10019814 3300025925 Bacteria 4733
75 Ga0207687_10022235 3300025927 Bacteria 4218
76 Ga0207700_10000215 3300025928 Bacteria 34521
77 Ga0207700_10004956 3300025928 Bacteria 7913
78 Ga0207644_10022236 3300025931 Bacteria 4331
79 Ga0207644_10031491 3300025931 Bacteria 3695
80 Ga0207706_10006729 3300025933 Bacteria 10627
81 Ga0207670_10004627 3300025936 Bacteria 7448
82 Ga0207670_10032652 3300025936 Bacteria 3349
83 Ga0207691_10007275 3300025940 Bacteria 10677
84 Ga0207689_10013419 3300025942 Bacteria 6995
85 Ga0207679_10034626 3300025945 Bacteria 3565
86 Ga0207679_10044547 3300025945 Bacteria 3202
87 Ga0207667_10021958 3300025949 Bacteria 7063
88 Ga0207677_10028402 3300026023 Bacteria 3537
89 Ga0207677_10063179 3300026023 Bacteria 2572
90 Ga0207708_10003353 3300026075 Bacteria 11811
91 Ga0207702_10014942 3300026078 Bacteria 6440
92 Ga0207648_10002410 3300026089 Bacteria 20139
93 Ga0207676_10006645 3300026095 Bacteria 8174
94 Ga0207674_10007992 3300026116 Bacteria 12276
95 Ga0207674_10017325 3300026116 Bacteria 7860
96 Ga0207675_100008248 3300026118 Bacteria 9813
97 Ga0207683_10005033 3300026121 Bacteria 11347
98 Ga0268266_10142714 3300028379 Bacteria 2150
99 Ga0268265_10015019 3300028380 Bacteria 5288
100 Ga0268264_10008754 3300028381 Bacteria 8400
101 Ga0268264_10044175 3300028381 Bacteria 3696
102 Ga0265330_10036937 3300031235 Bacteria 2175
103 Ga0265320_10003433 3300031240 Bacteria 10661
104 Ga0265331_10039318 3300031250 Bacteria 2307
105 Ga0265313_10004421 3300031595 Bacteria 10830
106 Ga0265313_10022801 3300031595 Bacteria 3387
107 Ga0265314_10005898 3300031711 Bacteria 10954
108 Ga0307410_10028520 3300031852 Bacteria 3543
109 Ga0307409_100008166 3300031995 Bacteria 6328
110 Ga0307416_100075923 3300032002 Bacteria 2814
111 Ga0307411_10058381 3300032005 Bacteria 2553
112 Ga0373926_0005739 3300035083 Bacteria 4099
113 Ga0373923_0008190 3300035111 Bacteria 3714
114 Ga0373936_0009402 3300035113 Bacteria 3685
115 Ga0373941_0000127 3300035115 Bacteria 13252
116 Ga0373957_0009417 3300035120 Bacteria 3196
117 Ga0373943_0000069 3300035170 Bacteria 36572
118 Ga0373943_0008185 3300035170 Bacteria 4693
119 Ga0373946_0000991 3300035171 Bacteria 9732
120 Ga0373931_0089706 3300035691 Bacteria 1711
121 Ga0373935_0009953 3300035692 Bacteria 5696
122 Ga0373935_0043823 3300035692 Bacteria 2817
123 Ga0373927_0016418 3300035695 Bacteria 4882
124 Ga0373933_0048146 3300035724 Bacteria 2537
125 Ga0373947_0000446 3300035725 Bacteria 23457
126 Ga0373947_0006789 3300035725 Bacteria 6635
127 Ga0373937_0000105 3300036401 Bacteria 80211
128 Ga0373925_0000883 3300037068 Bacteria 27390
129 Ga0373925_0004665 3300037068 Bacteria 10342
130 Ga0373925_0014923 3300037068 Bacteria 5615
131 Ga0436365_0536769 3300039437 Bacteria 7810
132 Ga0439449_0004450 3300042007 Bacteria 5406
133 Ga0466966_0088143 3300044684 Bacteria 1929
134 Ga0466959_0027208 3300045049 Bacteria 4242
135 Ga0451576_0074516 3300045051 Bacteria 3532
136 Ga0495603_0029816 3300046455 Bacteria 3288
137 Ga0495629_0000011 3300046459 Bacteria 268675
138 Ga0495629_0012215 3300046459 Bacteria 6221
139 Ga0495580_0012455 3300046472 Bacteria 6520
140 Ga0495580_0022249 3300046472 Bacteria 4667
141 Ga0495580_0036828 3300046472 Bacteria 3512
142 Ga0495639_0000613 3300046475 Bacteria 16587
143 Ga0495594_0002427 3300046499 Bacteria 9707
144 Ga0495618_0000259 3300046514 Bacteria 38359
145 Ga0495628_0024416 3300046516 Bacteria 4949
146 Ga0495630_0005629 3300046517 Bacteria 8852
147 Ga0495630_0009559 3300046517 Bacteria 6972
148 Ga0495630_0090828 3300046517 Bacteria 2307
149 Ga0495652_0065414 3300046529 Bacteria 3055
150 Ga0495665_0001507 3300046531 Bacteria 12479
151 Ga0495665_0012194 3300046531 Bacteria 4652
152 Ga0495640_0000979 3300046533 Bacteria 22134
153 Ga0495587_0000774 3300046536 Bacteria 21304
154 Ga0495645_0000696 3300046543 Bacteria 23105
155 Ga0495645_0018175 3300046543 Bacteria 5047
156 Ga0495667_0011574 3300046559 Bacteria 5973
157 Ga0495634_0006057 3300046642 Bacteria 9222
158 Ga0495635_0000280 3300046663 Bacteria 32788
159 Ga0495635_0031636 3300046663 Bacteria 3672
160 Ga0495588_0005841 3300046674 Bacteria 5507
161 Ga0495599_0002723 3300046678 Bacteria 10308
162 Ga0495623_0009115 3300046679 Bacteria 6439
163 Ga0495647_0008450 3300046681 Bacteria 3463
164 Ga0495613_0040084 3300046689 Bacteria 3471
165 Ga0495624_0004560 3300046690 Bacteria 10114
166 Ga0495600_0027166 3300046809 Bacteria 3698
167 Ga0495581_0008901 3300047315 Bacteria 5813
168 Ga0495674_0037050 3300047319 Bacteria 4385
169 Ga0495674_0047179 3300047319 Bacteria 3820
170 Ga0495672_0022725 3300047320 Bacteria 4070
171 Ga0495675_0001843 3300047444 Bacteria 12635
172 Ga0495684_0001987 3300047471 Bacteria 16434
173 Ga0495684_0006495 3300047471 Bacteria 9074
174 Ga0495593_0003243 3300047673 Bacteria 9753
175 Ga0495593_0009762 3300047673 Bacteria 5568
176 Ga0495602_0077901 3300048088 Bacteria 2802
177 Ga0495614_0001284 3300048089 Bacteria 10807
178 Ga0496104_0003869 3300048907 Bacteria 12952
179 Ga0496104_0005905 3300048907 Bacteria 10722
180 Ga0496105_0043383 3300048908 Bacteria 3709
181 Ga0496105_0066110 3300048908 Bacteria 2984
182 Ga0496107_0010201 3300048910 Bacteria 6517
183 Ga0496107_0018822 3300048910 Bacteria 4867
184 Ga0496107_0065022 3300048910 Bacteria 2644
185 Ga0496108_0075470 3300048911 Bacteria 2848
186 Ga0496109_0010011 3300048912 Bacteria 8094
187 Ga0496109_0030343 3300048912 Bacteria 4847
188 Ga0496110_0033142 3300048913 Bacteria 4466
189 Ga0496110_0087782 3300048913 Bacteria 2777
190 Ga0496111_0001472 3300048914 Bacteria 13471
191 Ga0496112_0125836 3300048915 Unclassified 2534
192 Ga0496113_0005968 3300048916 Bacteria 7663
193 Ga0496114_0085146 3300048917 Bacteria 2677
194 Ga0496115_0001260 3300048918 Bacteria 18171
195 Ga0496115_0074887 3300048918 Bacteria 2749
196 Ga0496121_0002265 3300048924 Bacteria 29946
197 Ga0496121_0011451 3300048924 Bacteria 9847
198 Ga0496126_0005298 3300048929 Bacteria 14802
199 Ga0496126_0027966 3300048929 Bacteria 5377
200 Ga0501032_0008464 3300049569 Bacteria 7499
201 Ga0501033_0014185 3300049570 Bacteria 6057
202 Ga0501033_0055119 3300049570 Bacteria 2939
203 Ga0501034_0000230 3300049571 Bacteria 105001
204 Ga0501034_0000979 3300049571 Bacteria 41076
205 Ga0501034_0044063 3300049571 Bacteria 4513
206 Ga0501036_0000602 3300049572 Bacteria 26088
207 Ga0501036_0014093 3300049572 Bacteria 6645
208 Ga0501037_0008058 3300049573 Bacteria 7719
209 Ga0501037_0009663 3300049573 Bacteria 7080
210 Ga0501037_0037850 3300049573 Bacteria 3556
211 Ga0501043_0008384 3300049579 Bacteria 8138
212 Ga0501043_0015397 3300049579 Bacteria 5989
213 Ga0501043_0051389 3300049579 Bacteria 3238
214 Ga0501047_0000104 3300049581 Bacteria 102971
215 Ga0501047_0014108 3300049581 Bacteria 7593
216 Ga0501048_0000272 3300049582 Bacteria 34674
217 Ga0501069_0014416 3300049585 Bacteria 4226
218 Ga0501069_0015997 3300049585 Bacteria 4023
219 Ga0501069_0030035 3300049585 Bacteria 2984
220 Ga0501070_0007235 3300049586 Bacteria 9426
221 Ga0501070_0010785 3300049586 Bacteria 7719
222 Ga0501071_0051684 3300049587 Bacteria 2962
223 Ga0501073_0010741 3300049589 Bacteria 6705
224 Ga0501073_0030227 3300049589 Bacteria 3868
225 Ga0501074_0008255 3300049590 Bacteria 7549
226 Ga0501074_0019702 3300049590 Bacteria 4897
227 Ga0501080_0003091 3300049742 Bacteria 14701
228 Ga0501080_0010423 3300049742 Bacteria 8508
229 Ga0501080_0037032 3300049742 Bacteria 4554
230 Ga0501080_0117910 3300049742 Bacteria 2460
231 Ga0501081_0015208 3300049743 Bacteria 5077
232 Ga0501083_0000790 3300049744 Bacteria 20771
233 Ga0501083_0056270 3300049744 Bacteria 2636
234 Ga0501035_0004713 3300049822 Bacteria 12950
235 Ga0501044_0055935 3300049823 Bacteria 4051
236 Ga0501044_0063613 3300049823 Bacteria 3768
237 nmdc:mga06r32_2540_c1 3300050510 Bacteria 16323
238 nmdc:mga08y16_28670_c1 3300050511 Bacteria 5868
239 nmdc:mga0n895_167205_c1 3300050512 Bacteria 2231
240 nmdc:mga0rr50_19561_c1 3300050513 Bacteria 4574
241 nmdc:mga08x19_14_c1 3300050514 Bacteria 365567
242 Ga0495601_0021549 3300053077 Bacteria 3947
243 Ga0495619_0002442 3300053085 Bacteria 12180
244 Ga0500566_0013786 3300053094 Bacteria 4756

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300035691 Ga0373931_0089706 Ga0373931_0089706_20_1627 531
2 3300037068 Ga0373925_0014923 Ga0373925_0014923_481_2274 560
3 3300049571 Ga0501034_0044063 Ga0501034_0044063_834_2660 582
4 3300049585 Ga0501069_0015997 Ga0501069_0015997_692_2518 582
5 3300049589 Ga0501073_0030227 Ga0501073_0030227_1528_3354 582
6 3300049590 Ga0501074_0019702 Ga0501074_0019702_2174_4000 582
7 3300049742 Ga0501080_0037032 Ga0501080_0037032_1377_3203 582
8 3300049823 Ga0501044_0055935 Ga0501044_0055935_624_2450 582
9 3300048917 Ga0496114_0085146 Ga0496114_0085146_401_2212 586
10 3300046517 Ga0495630_0090828 Ga0495630_0090828_435_2237 592
11 3300053077 Ga0495601_0021549 Ga0495601_0021549_2131_3933 592
12 iso_pu_bacteria 2643221651 2644290665 592
13 3300005340 Ga0070689_100058839 Ga0070689_1000588392 595
14 3300005354 Ga0070675_100000404 Ga0070675_1000004047 595
15 3300005543 Ga0070672_100125367 Ga0070672_1001253672 595
16 3300005617 Ga0068859_100037105 Ga0068859_1000371053 595
17 3300005842 Ga0068858_100008161 Ga0068858_1000081617 595
18 3300005843 Ga0068860_100031668 Ga0068860_1000316684 595
19 3300005937 Ga0081455_10012650 Ga0081455_100126507 595
20 3300006931 Ga0097620_100037104 Ga0097620_1000371043 595
21 3300028381 Ga0268264_10008754 Ga0268264_100087545 595
22 3300042007 Ga0439449_0004450 Ga0439449_0004450_12_1799 595
23 3300048907 Ga0496104_0005905 Ga0496104_0005905_6941_8731 595
24 3300048908 Ga0496105_0066110 Ga0496105_0066110_785_2575 595
25 3300048910 Ga0496107_0010201 Ga0496107_0010201_1630_3420 595
26 3300048911 Ga0496108_0075470 Ga0496108_0075470_230_2020 595
27 3300048912 Ga0496109_0010011 Ga0496109_0010011_6201_7991 595
28 3300048913 Ga0496110_0087782 Ga0496110_0087782_50_1840 595
29 3300048914 Ga0496111_0001472 Ga0496111_0001472_5379_7169 595
30 3300048916 Ga0496113_0005968 Ga0496113_0005968_3377_5167 595
31 3300048918 Ga0496115_0074887 Ga0496115_0074887_591_2381 595
32 3300048929 Ga0496126_0027966 Ga0496126_0027966_2410_4209 595
33 3300031852 Ga0307410_10028520 Ga0307410_100285202 596
34 3300031995 Ga0307409_100008166 Ga0307409_1000081663 596
35 3300032002 Ga0307416_100075923 Ga0307416_1000759232 596
36 3300032005 Ga0307411_10058381 Ga0307411_100583811 596
37 3300047320 Ga0495672_0022725 Ga0495672_0022725_2119_3939 596
38 3300048924 Ga0496121_0011451 Ga0496121_0011451_4782_6584 596
39 3300005335 Ga0070666_10028375 Ga0070666_100283753 597
40 3300005347 Ga0070668_100013649 Ga0070668_1000136492 597
41 3300006871 Ga0075434_100181807 Ga0075434_1001818072 597
42 3300028381 Ga0268264_10044175 Ga0268264_100441752 597
43 3300039437 Ga0436365_0536769 Ga0436365_0536769_1193_3085 597
44 3300046459 Ga0495629_0000011 Ga0495629_0000011_215081_216874 597
45 3300050512 nmdc:mga0n895_167205_c1 nmdc:mga0n895_167205_c1_378_2171 597
46 3300053094 Ga0500566_0013786 Ga0500566_0013786_2700_4493 597
47 3300005458 Ga0070681_10074300 Ga0070681_100743002 598
48 3300005536 Ga0070697_100002737 Ga0070697_10000273714 598
49 3300005545 Ga0070695_100002793 Ga0070695_1000027932 598
50 3300006914 Ga0075436_100001000 Ga0075436_10000100012 598
51 3300009098 Ga0105245_10017589 Ga0105245_100175892 598
52 3300025912 Ga0207707_10010665 Ga0207707_100106658 598
53 3300025927 Ga0207687_10022235 Ga0207687_100222352 598
54 3300026023 Ga0207677_10063179 Ga0207677_100631792 598
55 3300031235 Ga0265330_10036937 Ga0265330_100369371 598
56 3300031240 Ga0265320_10003433 Ga0265320_100034332 598
57 3300031250 Ga0265331_10039318 Ga0265331_100393181 598
58 3300031595 Ga0265313_10022801 Ga0265313_100228011 598
59 3300046517 Ga0495630_0009559 Ga0495630_0009559_3936_5741 598
60 3300048910 Ga0496107_0018822 Ga0496107_0018822_206_2062 598
61 3300048924 Ga0496121_0002265 Ga0496121_0002265_21452_23308 598
62 3300048929 Ga0496126_0005298 Ga0496126_0005298_9799_11655 598
63 3300050513 nmdc:mga0rr50_19561_c1 nmdc:mga0rr50_19561_c1_242_2038 598
64 3300050514 nmdc:mga08x19_14_c1 nmdc:mga08x19_14_c1_342745_344541 598
65 3300035695 Ga0373927_0016418 Ga0373927_0016418_2779_4593 599
66 3300045049 Ga0466959_0027208 Ga0466959_0027208_1989_3803 599
67 3300046472 Ga0495580_0012455 Ga0495580_0012455_1771_3585 599
68 3300046499 Ga0495594_0002427 Ga0495594_0002427_3418_5232 599
69 3300005340 Ga0070689_100020052 Ga0070689_1000200523 600
70 3300005355 Ga0070671_100000527 Ga0070671_10000052720 600
71 3300005436 Ga0070713_100000181 Ga0070713_10000018119 600
72 3300005548 Ga0070665_100109754 Ga0070665_1001097541 600
73 3300009098 Ga0105245_10090288 Ga0105245_100902881 600
74 3300014325 Ga0163163_10182034 Ga0163163_101820342 600
75 3300025925 Ga0207650_10019814 Ga0207650_100198142 600
76 3300025928 Ga0207700_10000215 Ga0207700_100002156 600
77 3300025931 Ga0207644_10031491 Ga0207644_100314911 600
78 3300025936 Ga0207670_10004627 Ga0207670_100046272 600
79 3300028379 Ga0268266_10142714 Ga0268266_101427141 600
80 3300035170 Ga0373943_0008185 Ga0373943_0008185_1911_3728 600
81 3300035692 Ga0373935_0009953 Ga0373935_0009953_916_2733 600
82 3300035725 Ga0373947_0006789 Ga0373947_0006789_2507_4324 600
83 3300037068 Ga0373925_0004665 Ga0373925_0004665_3241_5058 600
84 3300044684 Ga0466966_0088143 Ga0466966_0088143_49_1860 600
85 3300046455 Ga0495603_0029816 Ga0495603_0029816_1423_3240 600
86 3300046459 Ga0495629_0012215 Ga0495629_0012215_1751_3568 600
87 3300046472 Ga0495580_0022249 Ga0495580_0022249_1624_3441 600
88 3300046475 Ga0495639_0000613 Ga0495639_0000613_14610_16427 600
89 3300046531 Ga0495665_0001507 Ga0495665_0001507_4397_6214 600
90 3300046674 Ga0495588_0005841 Ga0495588_0005841_2806_4623 600
91 3300046689 Ga0495613_0040084 Ga0495613_0040084_100_1917 600
92 3300047315 Ga0495581_0008901 Ga0495581_0008901_80_1897 600
93 3300047319 Ga0495674_0037050 Ga0495674_0037050_1829_3643 600
94 3300047673 Ga0495593_0003243 Ga0495593_0003243_3037_4854 600
95 3300048089 Ga0495614_0001284 Ga0495614_0001284_5788_7605 600
96 3300025913 Ga0207695_10000803 Ga0207695_1000080325 601
97 3300025945 Ga0207679_10044547 Ga0207679_100445472 601
98 3300025949 Ga0207667_10021958 Ga0207667_100219582 601
99 3300035083 Ga0373926_0005739 Ga0373926_0005739_516_2345 601
100 3300035111 Ga0373923_0008190 Ga0373923_0008190_717_2546 601
101 3300035113 Ga0373936_0009402 Ga0373936_0009402_81_1910 601
102 3300035170 Ga0373943_0000069 Ga0373943_0000069_11339_13168 601
103 3300035171 Ga0373946_0000991 Ga0373946_0000991_2807_4636 601
104 3300035692 Ga0373935_0043823 Ga0373935_0043823_311_2140 601
105 3300035725 Ga0373947_0000446 Ga0373947_0000446_3944_5773 601
106 3300037068 Ga0373925_0000883 Ga0373925_0000883_21667_23496 601
107 3300046472 Ga0495580_0036828 Ga0495580_0036828_826_2655 601
108 3300046514 Ga0495618_0000259 Ga0495618_0000259_31399_33273 601
109 3300046517 Ga0495630_0005629 Ga0495630_0005629_262_2091 601
110 3300046529 Ga0495652_0065414 Ga0495652_0065414_113_1987 601
111 3300046531 Ga0495665_0012194 Ga0495665_0012194_1225_3054 601
112 3300046533 Ga0495640_0000979 Ga0495640_0000979_5822_7696 601
113 3300046543 Ga0495645_0018175 Ga0495645_0018175_1005_2879 601
114 3300046642 Ga0495634_0006057 Ga0495634_0006057_6441_8315 601
115 3300046663 Ga0495635_0000280 Ga0495635_0000280_20640_22514 601
116 3300046663 Ga0495635_0031636 Ga0495635_0031636_1299_3128 601
117 3300046681 Ga0495647_0008450 Ga0495647_0008450_832_2661 601
118 3300046690 Ga0495624_0004560 Ga0495624_0004560_1860_3689 601
119 3300047319 Ga0495674_0047179 Ga0495674_0047179_1646_3520 601
120 3300047471 Ga0495684_0001987 Ga0495684_0001987_6678_8552 601
121 3300047471 Ga0495684_0006495 Ga0495684_0006495_330_2159 601
122 3300047673 Ga0495593_0009762 Ga0495593_0009762_1675_3504 601
123 3300053085 Ga0495619_0002442 Ga0495619_0002442_9584_11458 601
124 3300005329 Ga0070683_100001742 Ga0070683_10000174215 602
125 3300005434 Ga0070709_10011104 Ga0070709_100111042 602
126 3300005436 Ga0070713_100007866 Ga0070713_1000078665 602
127 3300005535 Ga0070684_100003400 Ga0070684_1000034004 602
128 3300006844 Ga0075428_100070568 Ga0075428_1000705682 602
129 3300006846 Ga0075430_100024961 Ga0075430_1000249615 602
130 3300013297 Ga0157378_10108870 Ga0157378_101088702 602
131 3300025928 Ga0207700_10004956 Ga0207700_100049565 602
132 3300026116 Ga0207674_10017325 Ga0207674_100173254 602
133 3300031595 Ga0265313_10004421 Ga0265313_100044212 602
134 3300035120 Ga0373957_0009417 Ga0373957_0009417_476_2299 602
135 3300035724 Ga0373933_0048146 Ga0373933_0048146_114_1937 602
136 3300036401 Ga0373937_0000105 Ga0373937_0000105_44343_46166 602
137 3300046516 Ga0495628_0024416 Ga0495628_0024416_2916_4739 602
138 3300046536 Ga0495587_0000774 Ga0495587_0000774_17518_19341 602
139 3300046543 Ga0495645_0000696 Ga0495645_0000696_12535_14358 602
140 3300046559 Ga0495667_0011574 Ga0495667_0011574_2816_4639 602
141 3300046678 Ga0495599_0002723 Ga0495599_0002723_3296_5119 602
142 3300046679 Ga0495623_0009115 Ga0495623_0009115_1875_3698 602
143 3300046809 Ga0495600_0027166 Ga0495600_0027166_1237_3060 602
144 3300047444 Ga0495675_0001843 Ga0495675_0001843_3776_5599 602
145 3300048088 Ga0495602_0077901 Ga0495602_0077901_711_2534 602
146 3300048915 Ga0496112_0125836 Ga0496112_0125836_370_2211 602
147 3300050510 nmdc:mga06r32_2540_c1 nmdc:mga06r32_2540_c1_11981_13789 602
148 3300005981 Ga0081538_10040932 Ga0081538_100409323 603
149 3300009094 Ga0111539_10018285 Ga0111539_100182854 603
150 3300031711 Ga0265314_10005898 Ga0265314_100058983 603
151 3300050511 nmdc:mga08y16_28670_c1 nmdc:mga08y16_28670_c1_3850_5661 603
152 3300006237 Ga0097621_100001597 Ga0097621_1000015972 604
153 3300006358 Ga0068871_100016584 Ga0068871_1000165842 604
154 3300009551 Ga0105238_10011926 Ga0105238_100119263 604
155 3300013297 Ga0157378_10009573 Ga0157378_100095735 604
156 3300014969 Ga0157376_10031416 Ga0157376_100314164 604
157 3300025919 Ga0207657_10016578 Ga0207657_100165782 604
158 3300048907 Ga0496104_0003869 Ga0496104_0003869_4243_6075 604
159 3300048908 Ga0496105_0043383 Ga0496105_0043383_1796_3628 604
160 3300048910 Ga0496107_0065022 Ga0496107_0065022_419_2239 604
161 3300048912 Ga0496109_0030343 Ga0496109_0030343_214_2046 604
162 3300048918 Ga0496115_0001260 Ga0496115_0001260_13094_14914 604
163 3300049585 Ga0501069_0014416 Ga0501069_0014416_1294_3120 606
164 3300049585 Ga0501069_0030035 Ga0501069_0030035_370_2196 606
165 3300049586 Ga0501070_0007235 Ga0501070_0007235_2916_4742 606
166 3300049822 Ga0501035_0004713 Ga0501035_0004713_2506_4332 606
167 3300005290 Ga0065712_10071363 Ga0065712_100713633 608
168 3300005334 Ga0068869_100003487 Ga0068869_1000034876 608
169 3300005335 Ga0070666_10014384 Ga0070666_100143842 608
170 3300005338 Ga0068868_100084061 Ga0068868_1000840612 608
171 3300005340 Ga0070689_100010174 Ga0070689_1000101746 608
172 3300005344 Ga0070661_100000921 Ga0070661_1000009217 608
173 3300005355 Ga0070671_100012809 Ga0070671_1000128092 608
174 3300005364 Ga0070673_100003516 Ga0070673_1000035164 608
175 3300005435 Ga0070714_100007366 Ga0070714_1000073669 608
176 3300005457 Ga0070662_100044221 Ga0070662_1000442214 608
177 3300005459 Ga0068867_100006144 Ga0068867_1000061444 608
178 3300005535 Ga0070684_100001933 Ga0070684_10000193310 608
179 3300005543 Ga0070672_100020037 Ga0070672_1000200372 608
180 3300005544 Ga0070686_100003097 Ga0070686_1000030972 608
181 3300005548 Ga0070665_100062859 Ga0070665_1000628593 608
182 3300005563 Ga0068855_100124789 Ga0068855_1001247892 608
183 3300005564 Ga0070664_100001462 Ga0070664_1000014623 608
184 3300005577 Ga0068857_100008485 Ga0068857_1000084856 608
185 3300005614 Ga0068856_100001784 Ga0068856_1000017846 608
186 3300005615 Ga0070702_100043716 Ga0070702_1000437162 608
187 3300005617 Ga0068859_100019653 Ga0068859_1000196535 608
188 3300005618 Ga0068864_100041393 Ga0068864_1000413932 608
189 3300005719 Ga0068861_100021244 Ga0068861_1000212444 608
190 3300005840 Ga0068870_10000808 Ga0068870_100008082 608
191 3300005841 Ga0068863_100001097 Ga0068863_10000109711 608
192 3300005842 Ga0068858_100055539 Ga0068858_1000555393 608
193 3300005844 Ga0068862_100002364 Ga0068862_1000023643 608
194 3300006931 Ga0097620_100019653 Ga0097620_1000196535 608
195 3300009148 Ga0105243_10013051 Ga0105243_100130513 608
196 3300009177 Ga0105248_10002114 Ga0105248_1000211419 608
197 3300013306 Ga0163162_10025362 Ga0163162_100253625 608
198 3300013308 Ga0157375_10024664 Ga0157375_100246643 608
199 3300014745 Ga0157377_10002086 Ga0157377_100020865 608
200 3300025908 Ga0207643_10030949 Ga0207643_100309492 608
201 3300025931 Ga0207644_10022236 Ga0207644_100222363 608
202 3300025933 Ga0207706_10006729 Ga0207706_100067294 608
203 3300025936 Ga0207670_10032652 Ga0207670_100326522 608
204 3300025940 Ga0207691_10007275 Ga0207691_100072757 608
205 3300025942 Ga0207689_10013419 Ga0207689_100134196 608
206 3300025945 Ga0207679_10034626 Ga0207679_100346262 608
207 3300026023 Ga0207677_10028402 Ga0207677_100284024 608
208 3300026075 Ga0207708_10003353 Ga0207708_100033535 608
209 3300026078 Ga0207702_10014942 Ga0207702_100149422 608
210 3300026089 Ga0207648_10002410 Ga0207648_1000241016 608
211 3300026095 Ga0207676_10006645 Ga0207676_100066452 608
212 3300026116 Ga0207674_10007992 Ga0207674_100079926 608
213 3300026118 Ga0207675_100008248 Ga0207675_1000082486 608
214 3300026121 Ga0207683_10005033 Ga0207683_100050337 608
215 3300028380 Ga0268265_10015019 Ga0268265_100150195 608
216 3300035115 Ga0373941_0000127 Ga0373941_0000127_8190_10022 608
217 3300045051 Ga0451576_0074516 Ga0451576_0074516_1529_3355 608
218 3300048913 Ga0496110_0033142 Ga0496110_0033142_1808_3634 608
219 3300049569 Ga0501032_0008464 Ga0501032_0008464_1421_3253 608
220 3300049570 Ga0501033_0014185 Ga0501033_0014185_3213_5045 608
221 3300049570 Ga0501033_0055119 Ga0501033_0055119_655_2487 608
222 3300049571 Ga0501034_0000230 Ga0501034_0000230_13440_15272 608
223 3300049571 Ga0501034_0000979 Ga0501034_0000979_36363_38195 608
224 3300049572 Ga0501036_0000602 Ga0501036_0000602_10876_12708 608
225 3300049572 Ga0501036_0014093 Ga0501036_0014093_540_2387 608
226 3300049573 Ga0501037_0008058 Ga0501037_0008058_347_2179 608
227 3300049573 Ga0501037_0009663 Ga0501037_0009663_674_2521 608
228 3300049573 Ga0501037_0037850 Ga0501037_0037850_1233_3065 608
229 3300049579 Ga0501043_0008384 Ga0501043_0008384_74_1906 608
230 3300049579 Ga0501043_0015397 Ga0501043_0015397_2937_4769 608
231 3300049579 Ga0501043_0051389 Ga0501043_0051389_1230_3062 608
232 3300049581 Ga0501047_0000104 Ga0501047_0000104_61840_63672 608
233 3300049581 Ga0501047_0014108 Ga0501047_0014108_4771_6618 608
234 3300049582 Ga0501048_0000272 Ga0501048_0000272_29885_31717 608
235 3300049586 Ga0501070_0010785 Ga0501070_0010785_5107_6939 608
236 3300049587 Ga0501071_0051684 Ga0501071_0051684_922_2754 608
237 3300049589 Ga0501073_0010741 Ga0501073_0010741_713_2545 608
238 3300049590 Ga0501074_0008255 Ga0501074_0008255_5407_7239 608
239 3300049742 Ga0501080_0003091 Ga0501080_0003091_9988_11820 608
240 3300049742 Ga0501080_0010423 Ga0501080_0010423_5386_7233 608
241 3300049742 Ga0501080_0117910 Ga0501080_0117910_137_1969 608
242 3300049743 Ga0501081_0015208 Ga0501081_0015208_969_2801 608
243 3300049744 Ga0501083_0000790 Ga0501083_0000790_13246_15078 608
244 3300049744 Ga0501083_0056270 Ga0501083_0056270_481_2316 608
245 3300049823 Ga0501044_0063613 Ga0501044_0063613_966_2798 608

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00723

Glyco_hydro_15

Glycosyl hydrolases family 15

220

587

0.98

PF19291

TREH_N

Trehalase-like, N-terminal

1

203

0.74

Structural Annotation

Top 5 Hits

ID Description Score Start End
5hop-assembly1.cif.gz_B 1.65 angstrom resolution crystal structure of lmo0182 (residues 1-245) from listeria monocytogenes egd-e 0.81 334 582
5z3a-assembly1.cif.gz_A glycosidase wild type 0.7821 219 584
5z3c-assembly1.cif.gz_A glycosidase e178a 0.7797 219 584
5z3b-assembly1.cif.gz_A glycosidase y48f 0.7777 219 584
5z3d-assembly1.cif.gz_A glycosidase f290y 0.7769 219 584
ID Description Score Start End Superfamily
af_F1QF84_679_785_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 1.012 519 545 1.25.40.10
af_Q10211_257_646_1.50.10.10 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; 0.9675 217 584 1.50.10.10
af_P71741_292_669_1.50.10.10 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; 0.9376 220 595 1.50.10.10
af_P71741_292_669_1.50.10.10 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; 0.9255 220 595 1.50.10.10
af_Q550P8_15_206_2.70.98.50 Mainly Beta;Distorted Sandwich;Beta-galactosidase; Chain A, domain 5;putative glycoside hydrolase family protein from bacillus halodurans 0.9156 1 178 2.70.98.50
ID Description Score Start End GO Terms
AF-A0A2V8HIG6-F1-model_v4 Glucoamylase 0.9868 1 596 GO:0004553
GO:0005975
AF-A0A4R7T647-F1-model_v4 GH15 family glucan-1,4-alpha-glucosidase 0.986 3 584 GO:0004553
GO:0005975
AF-A0A2U1VMS1-F1-model_v4 Glucoamylase 0.9858 1 595 GO:0004553
GO:0005975
AF-A0A087PN35-F1-model_v4 deleted 0.9856 1 586
AF-A0A2W4JS03-F1-model_v4 Glucoamylase 0.9844 1 253 GO:0004553
GO:0005975

Feature Viewer

pLDDT pTM Quality
87.32 0.89 High
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Predicted Structure (AlphaFold2)

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