F357722

General Info

Members Datasets Scaffolds Average Seq Length
245 155 488 306

Family's Representative Sequence

Representative Sequence 3300049822|Ga0501035_0014267|Ga0501035_0014267_3615_4628
Length 337
Sequence MGRSLHQPHRRNGAGKAAIETAGGAEGGEXGGMSEQKTSALQDLAWRFEALVYDVFVGFMRLLPLDFASDLGGWLLRTLGPVSPVQRTVSRNLDLAFPEKDAVWKADISRAQWDNLGRMFAEFAQMDRITIESGRVTVEHMERLTDIAASGKPVVLISGHFANFEVMAAVIVAAGIPCQVTYRATNNPYIDKRIREGRRRYGVQLFAPKGGDGAKELMIGMARGESVALMNDQKFNRGVSTPFFSHPVDTAPGPTRLALRFGTVLQPLTVERLHKARFRVVAHPPIPVEDGENRTEVIEATVRNISRFIESVVRERPQEWFWVHKRWPNDLYRRVRS

Samples

Sample ID Description Type Environment
1 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
2 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
3 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
4 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
5 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
6 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
11 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
12 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
15 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
18 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
19 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
20 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
21 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
22 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
23 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
24 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
25 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
26 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
27 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
28 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
29 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
30 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
31 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
32 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
33 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
34 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
36 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
37 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
38 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
39 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
40 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
41 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
42 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
43 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
44 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
45 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
46 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
47 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
48 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
49 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
50 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
51 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
52 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
53 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
54 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
55 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
56 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
57 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300027378 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 PM (SPAdes) (version 2) Metagenome Rhizosphere
83 3300027543 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes) (version 2) Metagenome Rhizosphere
84 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
88 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
89 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
90 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
91 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
92 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
93 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
94 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
95 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
96 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
97 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
98 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
99 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
100 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
101 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
102 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
103 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
104 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
105 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
106 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
107 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
108 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
109 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
110 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
111 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
112 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
113 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
114 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
115 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
116 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
117 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
118 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
119 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
120 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
121 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
122 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
123 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
124 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
125 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
126 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
127 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
128 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
129 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
130 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
131 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
136 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
137 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
138 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
139 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
140 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
141 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
142 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
143 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
144 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
145 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
146 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
147 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
148 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
149 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
150 2643221574 Brevundimonas sp. Root608 Isolate Unclassified
151 2643221663 Brevundimonas sp. Root1279 Isolate Unclassified
152 2739367756 Asticcacaulis sp. CF398 Isolate Unclassified
153 2928972540 Brevundimonas sp. 1080 Isolate Rhizosphere
154 2941485952 Brevundimonas faecalis 2814 Isolate Rhizosphere
155 2977240413 Brevundimonas vesicularis SORGH_AS 431 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.55
Metatranscriptomes 0
Isolates 2.45

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 13.06
Nodule 0
Rhizoplane 4.49
Rhizosphere 77.14
Stem 0
Stem Tuber 0
Unclassified 1.22

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501035_0014267 3300049822 Bacteria 7334
2 Ga0055536_1000319 3300003781 Bacteria 35650
3 Ga0055530_10000497 3300003791 Bacteria 34124
4 Ga0055531_10004410 3300003794 Bacteria 8580
5 Ga0055531_10029771 3300003794 Bacteria 1851
6 Ga0065165_1000806 3300005262 Bacteria 41749
7 Ga0065165_1008104 3300005262 Bacteria 5004
8 Ga0070658_10192030 3300005327 Bacteria 1721
9 Ga0070670_100000009 3300005331 Bacteria 291074
10 Ga0070670_100213532 3300005331 Bacteria 1678
11 Ga0070666_10011293 3300005335 Bacteria 5605
12 Ga0070680_100151725 3300005336 Bacteria 1945
13 Ga0070660_100241790 3300005339 Bacteria 1470
14 Ga0070668_100000253 3300005347 Bacteria 35398
15 Ga0070668_100032846 3300005347 Bacteria 3949
16 Ga0070669_100002028 3300005353 Bacteria 14654
17 Ga0070659_100004367 3300005366 Bacteria 10092
18 Ga0070659_100015576 3300005366 Bacteria 5695
19 Ga0070667_100000218 3300005367 Bacteria 66273
20 Ga0070667_100174471 3300005367 Bacteria 1899
21 Ga0070663_100216217 3300005455 Bacteria 1503
22 Ga0070681_10005980 3300005458 Bacteria 11788
23 Ga0070679_100021219 3300005530 Bacteria 6338
24 Ga0070679_100296529 3300005530 Bacteria 1568
25 Ga0068853_100005694 3300005539 Bacteria 9800
26 Ga0070665_100001368 3300005548 Bacteria 28741
27 Ga0068855_100012661 3300005563 Bacteria 10180
28 Ga0068855_100033732 3300005563 Bacteria 6107
29 Ga0070664_100284303 3300005564 Bacteria 1492
30 Ga0070664_100444931 3300005564 Bacteria 1189
31 Ga0068859_100000093 3300005617 Bacteria 82384
32 Ga0068864_100000151 3300005618 Bacteria 65372
33 Ga0068864_100115968 3300005618 Bacteria 2389
34 Ga0068863_100002496 3300005841 Bacteria 18300
35 Ga0068863_100006328 3300005841 Bacteria 11612
36 Ga0068863_100083584 3300005841 Bacteria 3025
37 Ga0068863_100106215 3300005841 Bacteria 2671
38 Ga0068858_100001215 3300005842 Bacteria 26741
39 Ga0068858_100015048 3300005842 Bacteria 7277
40 Ga0068858_100143313 3300005842 Bacteria 2244
41 Ga0068858_100211632 3300005842 Bacteria 1835
42 Ga0068860_100000032 3300005843 Bacteria 251624
43 Ga0068860_100000184 3300005843 Bacteria 100730
44 Ga0068860_100007571 3300005843 Bacteria 10865
45 Ga0068860_100084666 3300005843 Bacteria 3016
46 Ga0068862_100000564 3300005844 Bacteria 38624
47 Ga0068862_100058838 3300005844 Bacteria 3298
48 Ga0075368_10001129 3300006042 Bacteria 8419
49 Ga0075364_10002283 3300006051 Bacteria 10740
50 Ga0075366_10068341 3300006195 Bacteria 2114
51 Ga0075370_10064486 3300006353 Bacteria 2089
52 Ga0068871_100143716 3300006358 Bacteria 2030
53 Ga0068865_100013675 3300006881 Bacteria 5138
54 Ga0097620_100000093 3300006931 Bacteria 82384
55 Ga0097620_100004978 3300006931 Bacteria 13492
56 Ga0105240_10046721 3300009093 Bacteria 5484
57 Ga0105240_10168338 3300009093 Bacteria 2597
58 Ga0105248_10013838 3300009177 Bacteria 8877
59 Ga0105248_10141545 3300009177 Bacteria 2714
60 Ga0105248_10370791 3300009177 Bacteria 1612
61 Ga0105237_10343112 3300009545 Bacteria 1498
62 Ga0105238_10031157 3300009551 Bacteria 5429
63 Ga0105238_10191152 3300009551 Bacteria 2023
64 Ga0105249_10001208 3300009553 Bacteria 22816
65 Ga0105239_10188174 3300010375 Bacteria 2311
66 Ga0105239_10252075 3300010375 Bacteria 1983
67 Ga0157373_10004869 3300013100 Bacteria 10103
68 Ga0157373_10012925 3300013100 Bacteria 6129
69 Ga0157371_10089482 3300013102 Bacteria 2180
70 Ga0157370_10084519 3300013104 Bacteria 2983
71 Ga0157370_10132508 3300013104 Bacteria 2324
72 Ga0157369_10027752 3300013105 Bacteria 6271
73 Ga0157369_10302942 3300013105 Bacteria 1662
74 Ga0157374_10277209 3300013296 Bacteria 1655
75 Ga0163162_10135922 3300013306 Bacteria 2569
76 Ga0163162_10180682 3300013306 Bacteria 2236
77 Ga0163162_10310897 3300013306 Bacteria 1708
78 Ga0157375_10026498 3300013308 Bacteria 5403
79 Ga0163163_10002685 3300014325 Bacteria 15046
80 Ga0157379_10001692 3300014968 Bacteria 18239
81 Ga0157379_10013452 3300014968 Bacteria 7169
82 Ga0163161_10167666 3300017792 Bacteria 1678
83 Ga0213871_10002957 3300021441 Bacteria 3208
84 Ga0209026_1001693 3300025250 Bacteria 9241
85 Ga0209676_1000895 3300025292 Bacteria 37836
86 Ga0209758_1002672 3300025297 Bacteria 17608
87 Ga0209050_1000121 3300025298 Bacteria 196019
88 Ga0209257_1000125 3300025304 Bacteria 218126
89 Ga0209257_1000881 3300025304 Bacteria 42377
90 Ga0209257_1002640 3300025304 Bacteria 17267
91 Ga0207680_10010612 3300025903 Bacteria 4616
92 Ga0207680_10065373 3300025903 Bacteria 2233
93 Ga0207707_10096854 3300025912 Bacteria 2578
94 Ga0207695_10006296 3300025913 Bacteria 15448
95 Ga0207695_10061739 3300025913 Bacteria 3872
96 Ga0207660_10004326 3300025917 Bacteria 9263
97 Ga0207660_10048520 3300025917 Bacteria 3005
98 Ga0207657_10018378 3300025919 Bacteria 6675
99 Ga0207657_10045355 3300025919 Bacteria 3859
100 Ga0207681_10007980 3300025923 Bacteria 6473
101 Ga0207694_10035674 3300025924 Bacteria 3816
102 Ga0207650_10000014 3300025925 Bacteria 398063
103 Ga0207650_10156037 3300025925 Bacteria 1805
104 Ga0207644_10001273 3300025931 Bacteria 16210
105 Ga0207690_10000323 3300025932 Bacteria 31991
106 Ga0207690_10011150 3300025932 Bacteria 5364
107 Ga0207706_10156329 3300025933 Bacteria 2005
108 Ga0207711_10050109 3300025941 Bacteria 3575
109 Ga0207711_10064959 3300025941 Bacteria 3153
110 Ga0207679_10424014 3300025945 Bacteria 1175
111 Ga0207667_10208562 3300025949 Bacteria 2003
112 Ga0207712_10028228 3300025961 Bacteria 3751
113 Ga0207712_10044791 3300025961 Bacteria 3060
114 Ga0207668_10000033 3300025972 Bacteria 121080
115 Ga0207668_10000338 3300025972 Bacteria 30325
116 Ga0207668_10057021 3300025972 Bacteria 2723
117 Ga0207668_10208867 3300025972 Bacteria 1560
118 Ga0207658_10000315 3300025986 Bacteria 48800
119 Ga0207658_10016549 3300025986 Bacteria 5074
120 Ga0207658_10019698 3300025986 Bacteria 4667
121 Ga0207703_10001598 3300026035 Bacteria 20510
122 Ga0207703_10011994 3300026035 Bacteria 6750
123 Ga0207639_10035044 3300026041 Bacteria 3713
124 Ga0207639_10128855 3300026041 Unclassified 2092
125 Ga0207678_10176308 3300026067 Bacteria 1825
126 Ga0207702_10144260 3300026078 Bacteria 2158
127 Ga0207641_10005221 3300026088 Bacteria 11109
128 Ga0207641_10011547 3300026088 Bacteria 7249
129 Ga0207641_10188223 3300026088 Bacteria 1895
130 Ga0207641_10214339 3300026088 Bacteria 1782
131 Ga0207676_10000251 3300026095 Bacteria 46615
132 Ga0207676_10023407 3300026095 Bacteria 4557
133 Ga0207676_10057219 3300026095 Bacteria 3069
134 Ga0207675_100120620 3300026118 Bacteria 2481
135 Ga0207698_10097166 3300026142 Bacteria 2430
136 Ga0209981_1001062 3300027378 Bacteria 3495
137 Ga0209999_1000651 3300027543 Bacteria 5572
138 Ga0268266_10047172 3300028379 Bacteria 3689
139 Ga0268266_10117122 3300028379 Bacteria 2367
140 Ga0268266_10241815 3300028379 Bacteria 1666
141 Ga0268265_10001418 3300028380 Bacteria 20285
142 Ga0268265_10006070 3300028380 Bacteria 8206
143 Ga0268265_10025934 3300028380 Bacteria 4166
144 Ga0268265_10036529 3300028380 Bacteria 3599
145 Ga0268265_10097653 3300028380 Bacteria 2364
146 Ga0268265_10160044 3300028380 Bacteria 1911
147 Ga0268264_10000045 3300028381 Bacteria 364764
148 Ga0268264_10000124 3300028381 Bacteria 187493
149 Ga0268264_10000170 3300028381 Bacteria 144898
150 Ga0268264_10130284 3300028381 Bacteria 2228
151 Ga0307517_10001943 3300028786 Bacteria 33765
152 Ga0265338_10062078 3300028800 Bacteria 3269
153 Ga0265327_10023583 3300031251 Bacteria 3642
154 Ga0307513_10002938 3300031456 Bacteria 23312
155 Ga0307516_10000002 3300031730 Bacteria 467851
156 Ga0307406_10005412 3300031901 Bacteria 6985
157 Ga0307412_10007645 3300031911 Bacteria 6139
158 Ga0307414_10019618 3300032004 Bacteria 4193
159 Ga0307414_10042862 3300032004 Bacteria 3078
160 Ga0307414_10052132 3300032004 Bacteria 2845
161 Ga0307414_10067255 3300032004 Bacteria 2566
162 Ga0307414_10085926 3300032004 Bacteria 2319
163 Ga0307414_10174035 3300032004 Bacteria 1724
164 Ga0307510_10007489 3300033180 Bacteria 13001
165 Ga0373944_0000447 3300035089 Bacteria 9561
166 Ga0373936_0001009 3300035113 Bacteria 10052
167 Ga0373960_0028785 3300035121 Bacteria 1535
168 Ga0373935_0069380 3300035692 Bacteria 2270
169 Ga0373927_0000473 3300035695 Bacteria 30820
170 Ga0373925_0000202 3300037068 Bacteria 64772
171 Ga0395899_0000476 3300037312 Bacteria 44879
172 Ga0395899_0087136 3300037312 Bacteria 2267
173 Ga0395899_0091442 3300037312 Bacteria 2205
174 Ga0395900_0000006 3300037418 Bacteria 495364
175 Ga0395900_0048306 3300037418 Bacteria 4384
176 Ga0395900_0089658 3300037418 Bacteria 3161
177 Ga0395898_0008977 3300037466 Bacteria 10528
178 Ga0395898_0190526 3300037466 Bacteria 1959
179 Ga0395898_0466039 3300037466 Bacteria 1202
180 Ga0395905_0013580 3300037471 Bacteria 7802
181 Ga0395905_0133735 3300037471 Bacteria 2333
182 Ga0395905_0307974 3300037471 Bacteria 1472
183 Ga0395905_0352745 3300037471 Bacteria 1363
184 Ga0395901_0000001 3300038443 Bacteria 800383
185 Ga0395901_0438935 3300038443 Bacteria 1336
186 Ga0436360_1138764 3300039438 Bacteria 9386
187 Ga0453684_0231295 3300044712 Bacteria 2134
188 Ga0495585_0023019 3300046492 Bacteria 3575
189 Ga0495583_0018910 3300046506 Bacteria 3612
190 Ga0495628_0128692 3300046516 Bacteria 1938
191 Ga0495642_0003221 3300046528 Bacteria 6473
192 Ga0495645_0067374 3300046543 Bacteria 2585
193 Ga0495633_0000833 3300046558 Bacteria 27221
194 Ga0495668_0080260 3300046616 Bacteria 1790
195 Ga0495669_0000162 3300046684 Bacteria 42734
196 Ga0495669_0041184 3300046684 Bacteria 2050
197 Ga0495649_0001973 3300046694 Bacteria 14891
198 Ga0495672_0000778 3300047320 Bacteria 34618
199 Ga0495686_0024060 3300047472 Bacteria 4005
200 Ga0496101_0067079 3300048904 Bacteria 2619
201 Ga0496106_0415429 3300048909 Unclassified 1081
202 Ga0496107_0166407 3300048910 Bacteria 1635
203 Ga0496109_0138150 3300048912 Bacteria 2278
204 Ga0496112_0091433 3300048915 Bacteria 3012
205 Ga0496112_0322000 3300048915 Bacteria 1490
206 Ga0496113_0179686 3300048916 Bacteria 1677
207 Ga0496115_0000564 3300048918 Bacteria 28783
208 Ga0496115_0023156 3300048918 Bacteria 4819
209 Ga0496115_0177645 3300048918 Bacteria 1760
210 Ga0496116_0029512 3300048919 Bacteria 3953
211 Ga0496122_0004205 3300048925 Bacteria 18109
212 Ga0496123_0017399 3300048926 Bacteria 5786
213 Ga0496125_0000174 3300048928 Bacteria 144548
214 Ga0501033_0264713 3300049570 Bacteria 1216
215 Ga0501033_0322544 3300049570 Bacteria 1085
216 Ga0501043_0171015 3300049579 Unclassified 1695
217 Ga0501047_0035051 3300049581 Bacteria 4847
218 Ga0501047_0037265 3300049581 Bacteria 4702
219 Ga0501048_0143394 3300049582 Bacteria 1689
220 Ga0501257_009493 3300049686 Bacteria 2198
221 Ga0501044_0170544 3300049823 Bacteria 2148
222 Ga0501044_0191303 3300049823 Bacteria 2009
223 nmdc:mga03n38_22659_c1 3300050490 Bacteria 2545
224 nmdc:mga00v17_9672_c1 3300050491 Bacteria 5230
225 nmdc:mga0k408_8222_c2 3300050493 Bacteria 3355
226 nmdc:mga07m45_21755_c1 3300050496 Bacteria 3496
227 Ga0500643_015503 3300053087 Bacteria 2610
228 Ga0500643_017941 3300053087 Bacteria 2358
229 Ga0500644_0002165 3300053088 Bacteria 4967
230 Ga0500651_0005646 3300053093 Bacteria 7163
231 Ga0500562_000146 3300053108 Bacteria 20862
232 Ga0500562_001299 3300053108 Bacteria 6159
233 Ga0500595_013356 3300053119 Bacteria 3148
234 Ga0500559_0000023 3300053136 Bacteria 127993
235 Ga0500559_0070426 3300053136 Bacteria 1573
236 Ga0500622_0002964 3300053156 Bacteria 11773
237 Ga0500639_082014 3300053163 Bacteria 1623
238 Ga0500636_0058882 3300053177 Bacteria 2245
239 2643882975 2643221574 Bacteria 2789653
240 2644353956 2643221663 Bacteria 3425771
241 2739791354 2739367756 Bacteria 4553612
242 2928973663 2928972540 Bacteria 3058286
243 2941488928 2941485952 Bacteria 3591484
244 2977241386 2977240413 Bacteria 3191065
245 Ga0501035_0014267
246 Ga0055536_1000319
247 Ga0055530_10000497
248 Ga0055531_10004410
249 Ga0055531_10029771
250 Ga0065165_1000806
251 Ga0065165_1008104
252 Ga0070658_10192030
253 Ga0070670_100000009
254 Ga0070670_100213532
255 Ga0070666_10011293
256 Ga0070680_100151725
257 Ga0070660_100241790
258 Ga0070668_100000253
259 Ga0070668_100032846
260 Ga0070669_100002028
261 Ga0070659_100004367
262 Ga0070659_100015576
263 Ga0070667_100000218
264 Ga0070667_100174471
265 Ga0070663_100216217
266 Ga0070681_10005980
267 Ga0070679_100021219
268 Ga0070679_100296529
269 Ga0068853_100005694
270 Ga0070665_100001368
271 Ga0068855_100012661
272 Ga0068855_100033732
273 Ga0070664_100284303
274 Ga0070664_100444931
275 Ga0068859_100000093
276 Ga0068864_100000151
277 Ga0068864_100115968
278 Ga0068863_100002496
279 Ga0068863_100006328
280 Ga0068863_100083584
281 Ga0068863_100106215
282 Ga0068858_100001215
283 Ga0068858_100015048
284 Ga0068858_100143313
285 Ga0068858_100211632
286 Ga0068860_100000032
287 Ga0068860_100000184
288 Ga0068860_100007571
289 Ga0068860_100084666
290 Ga0068862_100000564
291 Ga0068862_100058838
292 Ga0075368_10001129
293 Ga0075364_10002283
294 Ga0075366_10068341
295 Ga0075370_10064486
296 Ga0068871_100143716
297 Ga0068865_100013675
298 Ga0097620_100000093
299 Ga0097620_100004978
300 Ga0105240_10046721
301 Ga0105240_10168338
302 Ga0105248_10013838
303 Ga0105248_10141545
304 Ga0105248_10370791
305 Ga0105237_10343112
306 Ga0105238_10031157
307 Ga0105238_10191152
308 Ga0105249_10001208
309 Ga0105239_10188174
310 Ga0105239_10252075
311 Ga0157373_10004869
312 Ga0157373_10012925
313 Ga0157371_10089482
314 Ga0157370_10084519
315 Ga0157370_10132508
316 Ga0157369_10027752
317 Ga0157369_10302942
318 Ga0157374_10277209
319 Ga0163162_10135922
320 Ga0163162_10180682
321 Ga0163162_10310897
322 Ga0157375_10026498
323 Ga0163163_10002685
324 Ga0157379_10001692
325 Ga0157379_10013452
326 Ga0163161_10167666
327 Ga0213871_10002957
328 Ga0209026_1001693
329 Ga0209676_1000895
330 Ga0209758_1002672
331 Ga0209050_1000121
332 Ga0209257_1000125
333 Ga0209257_1000881
334 Ga0209257_1002640
335 Ga0207680_10010612
336 Ga0207680_10065373
337 Ga0207707_10096854
338 Ga0207695_10006296
339 Ga0207695_10061739
340 Ga0207660_10004326
341 Ga0207660_10048520
342 Ga0207657_10018378
343 Ga0207657_10045355
344 Ga0207681_10007980
345 Ga0207694_10035674
346 Ga0207650_10000014
347 Ga0207650_10156037
348 Ga0207644_10001273
349 Ga0207690_10000323
350 Ga0207690_10011150
351 Ga0207706_10156329
352 Ga0207711_10050109
353 Ga0207711_10064959
354 Ga0207679_10424014
355 Ga0207667_10208562
356 Ga0207712_10028228
357 Ga0207712_10044791
358 Ga0207668_10000033
359 Ga0207668_10000338
360 Ga0207668_10057021
361 Ga0207668_10208867
362 Ga0207658_10000315
363 Ga0207658_10016549
364 Ga0207658_10019698
365 Ga0207703_10001598
366 Ga0207703_10011994
367 Ga0207639_10035044
368 Ga0207639_10128855
369 Ga0207678_10176308
370 Ga0207702_10144260
371 Ga0207641_10005221
372 Ga0207641_10011547
373 Ga0207641_10188223
374 Ga0207641_10214339
375 Ga0207676_10000251
376 Ga0207676_10023407
377 Ga0207676_10057219
378 Ga0207675_100120620
379 Ga0207698_10097166
380 Ga0209981_1001062
381 Ga0209999_1000651
382 Ga0268266_10047172
383 Ga0268266_10117122
384 Ga0268266_10241815
385 Ga0268265_10001418
386 Ga0268265_10006070
387 Ga0268265_10025934
388 Ga0268265_10036529
389 Ga0268265_10097653
390 Ga0268265_10160044
391 Ga0268264_10000045
392 Ga0268264_10000124
393 Ga0268264_10000170
394 Ga0268264_10130284
395 Ga0307517_10001943
396 Ga0265338_10062078
397 Ga0265327_10023583
398 Ga0307513_10002938
399 Ga0307516_10000002
400 Ga0307406_10005412
401 Ga0307412_10007645
402 Ga0307414_10019618
403 Ga0307414_10042862
404 Ga0307414_10052132
405 Ga0307414_10067255
406 Ga0307414_10085926
407 Ga0307414_10174035
408 Ga0307510_10007489
409 Ga0373944_0000447
410 Ga0373936_0001009
411 Ga0373960_0028785
412 Ga0373935_0069380
413 Ga0373927_0000473
414 Ga0373925_0000202
415 Ga0395899_0000476
416 Ga0395899_0087136
417 Ga0395899_0091442
418 Ga0395900_0000006
419 Ga0395900_0048306
420 Ga0395900_0089658
421 Ga0395898_0008977
422 Ga0395898_0190526
423 Ga0395898_0466039
424 Ga0395905_0013580
425 Ga0395905_0133735
426 Ga0395905_0307974
427 Ga0395905_0352745
428 Ga0395901_0000001
429 Ga0395901_0438935
430 Ga0436360_1138764
431 Ga0453684_0231295
432 Ga0495585_0023019
433 Ga0495583_0018910
434 Ga0495628_0128692
435 Ga0495642_0003221
436 Ga0495645_0067374
437 Ga0495633_0000833
438 Ga0495668_0080260
439 Ga0495669_0000162
440 Ga0495669_0041184
441 Ga0495649_0001973
442 Ga0495672_0000778
443 Ga0495686_0024060
444 Ga0496101_0067079
445 Ga0496106_0415429
446 Ga0496107_0166407
447 Ga0496109_0138150
448 Ga0496112_0091433
449 Ga0496112_0322000
450 Ga0496113_0179686
451 Ga0496115_0000564
452 Ga0496115_0023156
453 Ga0496115_0177645
454 Ga0496116_0029512
455 Ga0496122_0004205
456 Ga0496123_0017399
457 Ga0496125_0000174
458 Ga0501033_0264713
459 Ga0501033_0322544
460 Ga0501043_0171015
461 Ga0501047_0035051
462 Ga0501047_0037265
463 Ga0501048_0143394
464 Ga0501257_009493
465 Ga0501044_0170544
466 Ga0501044_0191303
467 nmdc:mga03n38_22659_c1
468 nmdc:mga00v17_9672_c1
469 nmdc:mga0k408_8222_c2
470 nmdc:mga07m45_21755_c1
471 Ga0500643_015503
472 Ga0500643_017941
473 Ga0500644_0002165
474 Ga0500651_0005646
475 Ga0500562_000146
476 Ga0500562_001299
477 Ga0500595_013356
478 Ga0500559_0000023
479 Ga0500559_0070426
480 Ga0500622_0002964
481 Ga0500639_082014
482 Ga0500636_0058882
483 2643882975
484 2644353956
485 2739791354
486 2928973663
487 2941488928
488 2977241386

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03279

Lip_A_acyltrans

Bacterial lipid A biosynthesis acyltransferase

36

329

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
5knk-assembly1.cif.gz_B-2 lipid a secondary acyltransferase lpxm from acinetobacter baumannii with catalytic residue substitution (e127a) 0.7971 38 301
5kn7-assembly1.cif.gz_B-2 lipid a secondary acyltransferase lpxm from acinetobacter baumannii 0.793 38 301
5f34-assembly1.cif.gz_A crystal structure of membrane associated pata from mycobacterium smegmatis in complex with s-hexadecyl coenzyme a - p21 space group 0.7912 51 302
5f34-assembly1.cif.gz_A crystal structure of membrane associated pata from mycobacterium smegmatis in complex with s-hexadecyl coenzyme a - p21 space group 0.7827 51 302
5knk-assembly1.cif.gz_B-2 lipid a secondary acyltransferase lpxm from acinetobacter baumannii with catalytic residue substitution (e127a) 0.7035 38 301
ID Description Score Start End Superfamily
af_Q7KTI0_75_205_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.6157 103 230 3.40.50.620
af_Q8GXU8_180_307_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.6069 103 230 3.40.50.2000
af_Q7KTI0_75_205_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.5772 103 230 3.40.50.620
af_O53516_20_152_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.5707 115 230 3.40.50.2000
af_Q8GXU8_180_307_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.5669 103 230 3.40.50.2000
ID Description Score Start End GO Terms
AF-A0A0Q7EBR0-F1-model_v4 Lipid A biosynthesis acyltransferase 0.9889 1 301 GO:0005886
GO:0009247
GO:0016746
AF-A0A539D0S4-F1-model_v4 Lipid A biosynthesis lauroyl acyltransferase 0.9862 54 302 GO:0005886
GO:0009247
GO:0016746
AF-A0A519KJ64-F1-model_v4 Lipid A biosynthesis acyltransferase 0.9824 3 220 GO:0005886
GO:0009247
GO:0016746
AF-A0A0Q7EBR0-F1-model_v4 Lipid A biosynthesis acyltransferase 0.9792 1 301 GO:0005886
GO:0009247
GO:0016746
AF-A0A539D0S4-F1-model_v4 Lipid A biosynthesis lauroyl acyltransferase 0.9784 54 302 GO:0005886
GO:0009247
GO:0016746

Map